ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506148.1| PREDICTED Oryza sativa (japonica cultivar-group... 206 7e-50
2ref|XM_476451.1| Oryza sativa (japonica cultivar-group), mRNA 206 7e-50
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 206 7e-50
4dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic D... 206 7e-50
5dbj|AK101000.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 7e-50
6dbj|AK070529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 7e-50
7ref|XM_463934.1| Oryza sativa (japonica cultivar-group), mRNA 178 2e-41
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
9dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
10gb|BT018635.1| Zea mays clone EL01N0504B06.d mRNA sequence 151 4e-33
11gb|AY109680.1| Zea mays CL17699_1 mRNA sequence 131 3e-27
12gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete s... 48 0.040
13gb|AF106931.1| Medicago truncatula putative translation initiati... 48 0.040
14emb|AL954241.1| Pan troglodytes chromosome 22 clone RP43-181I17 ... 42 2.4
15emb|AL954240.1| Pan troglodytes chromosome 22 clone PTB-045O21 m... 42 2.4
16gb|AC022568.7| Homo sapiens chromosome 8, clone RP11-10H3, compl... 42 2.4
17gb|AY240946.1| Bifidobacterium adolescentis alpha-amylase (amyB)... 42 2.4
18gb|AC159001.2| Mus musculus BAC clone RP24-221A23 from chromosom... 42 2.4
19emb|CT025608.12| Mouse DNA sequence from clone RP23-292F17 on ch... 42 2.4
20gb|M27659.1|SCMESPAB S.haematobium eggshell protein gene ORFs 42 2.4
21gb|M27658.1|SCMESPAA S.haematobium eggshell protein gene ORFs 42 2.4
22ref|NM_115473.2| Arabidopsis thaliana EIF3C (EUKARYOTIC TRANSLAT... 40 9.7
23gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.7
24gb|BC092206.1| Rattus norvegicus vesicle-associated membrane pro... 40 9.7
25ref|NM_013090.2| Rattus norvegicus vesicle-associated membrane p... 40 9.7
26gb|BC074471.1| Xenopus laevis cDNA clone IMAGE:6950803, partial cds 40 9.7
27gb|AC145859.4| Pan troglodytes BAC clone RP43-6G18 from 7, compl... 40 9.7
28emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 9.7
29gb|AC073272.7| Homo sapiens BAC clone RP11-590O19 from 7, comple... 40 9.7
30gb|AC073193.10| Homo sapiens BAC clone RP11-175C14 from 7, compl... 40 9.7
31emb|Z77249.2|HS358H7 Human DNA sequence from clone RP3-358H7 on ... 40 9.7
32emb|AL355361.39| Human DNA sequence from clone RP11-58N22 on chr... 40 9.7
33gb|AY064006.1| Arabidopsis thaliana putative eukaryotic translat... 40 9.7
34emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 9.7
35emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 40 9.7
36emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, B... 40 9.7
37emb|AJ426040.1|TRU426040 Takifugu rubripes vader gene, cetn gene... 40 9.7
38emb|AL928933.7| Mouse DNA sequence from clone RP23-419H6 on chro... 40 9.7
39emb|CR361551.8| Zebrafish DNA sequence from clone CH211-224M9 in... 40 9.7
40gb|AC092954.4| Homo sapiens 3 BAC RP11-368I23 (Roswell Park Canc... 40 9.7
41gb|AF106930.1| Medicago truncatula putative translation initiati... 40 9.7
42gb|S82311.1| putative glycine-rich protein {clone CHEM 11} [Zea ... 40 9.7
43dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
44dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
45gb|AF040102.1|AF040102 Arabidopsis thaliana eIF3c mRNA, complete... 40 9.7
46dbj|AK119673.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.7
47dbj|AK099309.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.7
48emb|BX005039.11| Mouse DNA sequence from clone RP23-391M18 on ch... 40 9.7
49dbj|AK064923.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.7
50gb|AY103756.1| Zea mays PCO151485 mRNA sequence 40 9.7
51gb|BT001961.1| Arabidopsis thaliana clone U10766 putative eukary... 40 9.7
52gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.7
53gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.7
54emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536... 40 9.7
55emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510... 40 9.7
56emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chr... 40 9.7
57gb|M24104.1|RATVAMPIR Rat vesicle associated membrane protein (V... 40 9.7 
>ref|XM_506148.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474G09.102 mRNA
          Length = 3214

 Score =  206 bits (104), Expect = 7e-50
 Identities = 211/247 (85%), Gaps = 6/247 (2%)
 Strand = Plus / Minus

                                                                        
Query: 454  ccttgtgacgatacaaagttctcctgccactttcccatattggacgagtcttgatca--- 510
            |||||||| ||||| ||||||||||||||||| ||||  ||||| ||||| ||| ||   
Sbjct: 2749 ccttgtgatgatacgaagttctcctgccacttgcccaagttggatgagtcctgaccatca 2690

                                                                        
Query: 511  ---cccctgcgcctgggtggtgcaccctcaagggcaccaccagtcctggcctcatacgcc 567
               ||||| |||||||||||||| |||||||||| |||||||||  |||||||||| |||
Sbjct: 2689 ccacccctacgcctgggtggtgctccctcaagggtaccaccagttttggcctcatatgcc 2630

                                                                        
Query: 568  ctctcgttgctctccacaaggacagagagcctatcagtcatctggaagatcagtccctgc 627
            ||||| |||||||||||||||||||||||| |||||| |||||||||||  |||||||| 
Sbjct: 2629 ctctcattgctctccacaaggacagagagcttatcagacatctggaagagtagtccctga 2570

                                                                        
Query: 628  agcctggtttgatccacgttctggaatacaatgcactttgttggctggtcccagcttgca 687
            ||||| |||||||| || || ||||| | ||||||||| ||||| || |||||||| |||
Sbjct: 2569 agcctagtttgatcaacattgtggaaaataatgcacttggttggttgatcccagctggca 2510

                   
Query: 688  tgaagct 694
            |||||||
Sbjct: 2509 tgaagct 2503



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 77/86 (89%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                        
Query: 298  gaaccagactggttgcgagaccttcc---atcctggaaccgagaaccaccaccatagccg 354
            ||||||||||||||||||||||||||   ||| ||||| || ||||||||||||||||| 
Sbjct: 2911 gaaccagactggttgcgagaccttcccccatcttggaagcgcgaaccaccaccatagcct 2852

                                      
Query: 355  ccacgggaaccctggccacccctgtc 380
            |||||||||||||| | |||||||||
Sbjct: 2851 ccacgggaaccctgactacccctgtc 2826
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>ref|XM_476451.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3207

 Score =  206 bits (104), Expect = 7e-50
 Identities = 211/247 (85%), Gaps = 6/247 (2%)
 Strand = Plus / Minus

                                                                        
Query: 454  ccttgtgacgatacaaagttctcctgccactttcccatattggacgagtcttgatca--- 510
            |||||||| ||||| ||||||||||||||||| ||||  ||||| ||||| ||| ||   
Sbjct: 2742 ccttgtgatgatacgaagttctcctgccacttgcccaagttggatgagtcctgaccatca 2683

                                                                        
Query: 511  ---cccctgcgcctgggtggtgcaccctcaagggcaccaccagtcctggcctcatacgcc 567
               ||||| |||||||||||||| |||||||||| |||||||||  |||||||||| |||
Sbjct: 2682 ccacccctacgcctgggtggtgctccctcaagggtaccaccagttttggcctcatatgcc 2623

                                                                        
Query: 568  ctctcgttgctctccacaaggacagagagcctatcagtcatctggaagatcagtccctgc 627
            ||||| |||||||||||||||||||||||| |||||| |||||||||||  |||||||| 
Sbjct: 2622 ctctcattgctctccacaaggacagagagcttatcagacatctggaagagtagtccctga 2563

                                                                        
Query: 628  agcctggtttgatccacgttctggaatacaatgcactttgttggctggtcccagcttgca 687
            ||||| |||||||| || || ||||| | ||||||||| ||||| || |||||||| |||
Sbjct: 2562 agcctagtttgatcaacattgtggaaaataatgcacttggttggttgatcccagctggca 2503

                   
Query: 688  tgaagct 694
            |||||||
Sbjct: 2502 tgaagct 2496



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 77/86 (89%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                        
Query: 298  gaaccagactggttgcgagaccttcc---atcctggaaccgagaaccaccaccatagccg 354
            ||||||||||||||||||||||||||   ||| ||||| || ||||||||||||||||| 
Sbjct: 2904 gaaccagactggttgcgagaccttcccccatcttggaagcgcgaaccaccaccatagcct 2845

                                      
Query: 355  ccacgggaaccctggccacccctgtc 380
            |||||||||||||| | |||||||||
Sbjct: 2844 ccacgggaaccctgactacccctgtc 2819
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  206 bits (104), Expect = 7e-50
 Identities = 211/247 (85%), Gaps = 6/247 (2%)
 Strand = Plus / Minus

                                                                           
Query: 454     ccttgtgacgatacaaagttctcctgccactttcccatattggacgagtcttgatca--- 510
               |||||||| ||||| ||||||||||||||||| ||||  ||||| ||||| ||| ||   
Sbjct: 1277252 ccttgtgatgatacgaagttctcctgccacttgcccaagttggatgagtcctgaccatca 1277193

                                                                           
Query: 511     ---cccctgcgcctgggtggtgcaccctcaagggcaccaccagtcctggcctcatacgcc 567
                  ||||| |||||||||||||| |||||||||| |||||||||  |||||||||| |||
Sbjct: 1277192 ccacccctacgcctgggtggtgctccctcaagggtaccaccagttttggcctcatatgcc 1277133

                                                                           
Query: 568     ctctcgttgctctccacaaggacagagagcctatcagtcatctggaagatcagtccctgc 627
               ||||| |||||||||||||||||||||||| |||||| |||||||||||  |||||||| 
Sbjct: 1277132 ctctcattgctctccacaaggacagagagcttatcagacatctggaagagtagtccctga 1277073

                                                                           
Query: 628     agcctggtttgatccacgttctggaatacaatgcactttgttggctggtcccagcttgca 687
               ||||| |||||||| || || ||||| | ||||||||| ||||| || |||||||| |||
Sbjct: 1277072 agcctagtttgatcaacattgtggaaaataatgcacttggttggttgatcccagctggca 1277013

                      
Query: 688     tgaagct 694
               |||||||
Sbjct: 1277012 tgaagct 1277006



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 77/86 (89%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                           
Query: 298     gaaccagactggttgcgagaccttcc---atcctggaaccgagaaccaccaccatagccg 354
               ||||||||||||||||||||||||||   ||| ||||| || ||||||||||||||||| 
Sbjct: 1277414 gaaccagactggttgcgagaccttcccccatcttggaagcgcgaaccaccaccatagcct 1277355

                                         
Query: 355     ccacgggaaccctggccacccctgtc 380
               |||||||||||||| | |||||||||
Sbjct: 1277354 ccacgggaaccctgactacccctgtc 1277329
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>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474G09
          Length = 169511

 Score =  206 bits (104), Expect = 7e-50
 Identities = 211/247 (85%), Gaps = 6/247 (2%)
 Strand = Plus / Minus

                                                                         
Query: 454   ccttgtgacgatacaaagttctcctgccactttcccatattggacgagtcttgatca--- 510
             |||||||| ||||| ||||||||||||||||| ||||  ||||| ||||| ||| ||   
Sbjct: 42087 ccttgtgatgatacgaagttctcctgccacttgcccaagttggatgagtcctgaccatca 42028

                                                                         
Query: 511   ---cccctgcgcctgggtggtgcaccctcaagggcaccaccagtcctggcctcatacgcc 567
                ||||| |||||||||||||| |||||||||| |||||||||  |||||||||| |||
Sbjct: 42027 ccacccctacgcctgggtggtgctccctcaagggtaccaccagttttggcctcatatgcc 41968

                                                                         
Query: 568   ctctcgttgctctccacaaggacagagagcctatcagtcatctggaagatcagtccctgc 627
             ||||| |||||||||||||||||||||||| |||||| |||||||||||  |||||||| 
Sbjct: 41967 ctctcattgctctccacaaggacagagagcttatcagacatctggaagagtagtccctga 41908

                                                                         
Query: 628   agcctggtttgatccacgttctggaatacaatgcactttgttggctggtcccagcttgca 687
             ||||| |||||||| || || ||||| | ||||||||| ||||| || |||||||| |||
Sbjct: 41907 agcctagtttgatcaacattgtggaaaataatgcacttggttggttgatcccagctggca 41848

                    
Query: 688   tgaagct 694
             |||||||
Sbjct: 41847 tgaagct 41841



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 77/86 (89%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                         
Query: 298   gaaccagactggttgcgagaccttcc---atcctggaaccgagaaccaccaccatagccg 354
             ||||||||||||||||||||||||||   ||| ||||| || ||||||||||||||||| 
Sbjct: 42249 gaaccagactggttgcgagaccttcccccatcttggaagcgcgaaccaccaccatagcct 42190

                                       
Query: 355   ccacgggaaccctggccacccctgtc 380
             |||||||||||||| | |||||||||
Sbjct: 42189 ccacgggaaccctgactacccctgtc 42164
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>dbj|AK101000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147D18, full
            insert sequence
          Length = 3206

 Score =  206 bits (104), Expect = 7e-50
 Identities = 211/247 (85%), Gaps = 6/247 (2%)
 Strand = Plus / Minus

                                                                        
Query: 454  ccttgtgacgatacaaagttctcctgccactttcccatattggacgagtcttgatca--- 510
            |||||||| ||||| ||||||||||||||||| ||||  ||||| ||||| ||| ||   
Sbjct: 2741 ccttgtgatgatacgaagttctcctgccacttgcccaagttggatgagtcctgaccatca 2682

                                                                        
Query: 511  ---cccctgcgcctgggtggtgcaccctcaagggcaccaccagtcctggcctcatacgcc 567
               ||||| |||||||||||||| |||||||||| |||||||||  |||||||||| |||
Sbjct: 2681 ccacccctacgcctgggtggtgctccctcaagggtaccaccagttttggcctcatatgcc 2622

                                                                        
Query: 568  ctctcgttgctctccacaaggacagagagcctatcagtcatctggaagatcagtccctgc 627
            ||||| |||||||||||||||||||||||| |||||| |||||||||||  |||||||| 
Sbjct: 2621 ctctcattgctctccacaaggacagagagcttatcagacatctggaagagtagtccctga 2562

                                                                        
Query: 628  agcctggtttgatccacgttctggaatacaatgcactttgttggctggtcccagcttgca 687
            ||||| |||||||| || || ||||| | ||||||||| ||||| || |||||||| |||
Sbjct: 2561 agcctagtttgatcaacattgtggaaaataatgcacttggttggttgatcccagctggca 2502

                   
Query: 688  tgaagct 694
            |||||||
Sbjct: 2501 tgaagct 2495



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 77/86 (89%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                        
Query: 298  gaaccagactggttgcgagaccttcc---atcctggaaccgagaaccaccaccatagccg 354
            ||||||||||||||||||||||||||   ||| ||||| || ||||||||||||||||| 
Sbjct: 2903 gaaccagactggttgcgagaccttcccccatcttggaagcgcgaaccaccaccatagcct 2844

                                      
Query: 355  ccacgggaaccctggccacccctgtc 380
            |||||||||||||| | |||||||||
Sbjct: 2843 ccacgggaaccctgactacccctgtc 2818
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>dbj|AK070529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060K11, full
            insert sequence
          Length = 3214

 Score =  206 bits (104), Expect = 7e-50
 Identities = 211/247 (85%), Gaps = 6/247 (2%)
 Strand = Plus / Minus

                                                                        
Query: 454  ccttgtgacgatacaaagttctcctgccactttcccatattggacgagtcttgatca--- 510
            |||||||| ||||| ||||||||||||||||| ||||  ||||| ||||| ||| ||   
Sbjct: 2749 ccttgtgatgatacgaagttctcctgccacttgcccaagttggatgagtcctgaccatca 2690

                                                                        
Query: 511  ---cccctgcgcctgggtggtgcaccctcaagggcaccaccagtcctggcctcatacgcc 567
               ||||| |||||||||||||| |||||||||| |||||||||  |||||||||| |||
Sbjct: 2689 ccacccctacgcctgggtggtgctccctcaagggtaccaccagttttggcctcatatgcc 2630

                                                                        
Query: 568  ctctcgttgctctccacaaggacagagagcctatcagtcatctggaagatcagtccctgc 627
            ||||| |||||||||||||||||||||||| |||||| |||||||||||  |||||||| 
Sbjct: 2629 ctctcattgctctccacaaggacagagagcttatcagacatctggaagagtagtccctga 2570

                                                                        
Query: 628  agcctggtttgatccacgttctggaatacaatgcactttgttggctggtcccagcttgca 687
            ||||| |||||||| || || ||||| | ||||||||| ||||| || |||||||| |||
Sbjct: 2569 agcctagtttgatcaacattgtggaaaataatgcacttggttggttgatcccagctggca 2510

                   
Query: 688  tgaagct 694
            |||||||
Sbjct: 2509 tgaagct 2503



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 77/86 (89%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                        
Query: 298  gaaccagactggttgcgagaccttcc---atcctggaaccgagaaccaccaccatagccg 354
            ||||||||||||||||||||||||||   ||| ||||| || ||||||||||||||||| 
Sbjct: 2911 gaaccagactggttgcgagaccttcccccatcttggaagcgcgaaccaccaccatagcct 2852

                                      
Query: 355  ccacgggaaccctggccacccctgtc 380
            |||||||||||||| | |||||||||
Sbjct: 2851 ccacgggaaccctgactacccctgtc 2826
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>ref|XM_463934.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2784

 Score =  178 bits (90), Expect = 2e-41
 Identities = 206/244 (84%), Gaps = 3/244 (1%)
 Strand = Plus / Minus

                                                                        
Query: 454  ccttgtgacgatacaaagttctcctgccactttcccatattggacgagtcttga---tca 510
            |||||||| ||||| ||||||||||||||||| ||||  ||||| ||||| |||   |||
Sbjct: 2579 ccttgtgatgatacgaagttctcctgccacttgcccaagttggatgagtcctgagcatca 2520

                                                                        
Query: 511  cccctgcgcctgggtggtgcaccctcaagggcaccaccagtcctggcctcatacgccctc 570
            ||||| |||||||||||||| ||||||| || |||||||||  | ||||| || ||||||
Sbjct: 2519 cccctacgcctgggtggtgctccctcaaaggtaccaccagttttagcctcgtatgccctc 2460

                                                                        
Query: 571  tcgttgctctccacaaggacagagagcctatcagtcatctggaagatcagtccctgcagc 630
            || ||||||||||||||||| |||||| |||||| |||||||||||  |||||||| || 
Sbjct: 2459 tcattgctctccacaaggactgagagcttatcagccatctggaagagtagtccctgaagt 2400

                                                                        
Query: 631  ctggtttgatccacgttctggaatacaatgcactttgttggctggtcccagcttgcatga 690
            || |||||||| ||||| ||||| |  |||||||| || || || |||||||| ||||||
Sbjct: 2399 ctagtttgatcaacgttgtggaaaatgatgcacttggtaggttgatcccagctggcatga 2340

                
Query: 691  agct 694
            ||||
Sbjct: 2339 agct 2336



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 322  ccatcctggaaccgagaaccaccaccatagccgccacgggaaccctg 368
            ||||||||||| || ||||||||||||||||| ||||| ||||||||
Sbjct: 2714 ccatcctggaagcgtgaaccaccaccatagcctccacgagaaccctg 2668
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  178 bits (90), Expect = 2e-41
 Identities = 206/244 (84%), Gaps = 3/244 (1%)
 Strand = Plus / Minus

                                                                           
Query: 454     ccttgtgacgatacaaagttctcctgccactttcccatattggacgagtcttga---tca 510
               |||||||| ||||| ||||||||||||||||| ||||  ||||| ||||| |||   |||
Sbjct: 1222505 ccttgtgatgatacgaagttctcctgccacttgcccaagttggatgagtcctgagcatca 1222446

                                                                           
Query: 511     cccctgcgcctgggtggtgcaccctcaagggcaccaccagtcctggcctcatacgccctc 570
               ||||| |||||||||||||| ||||||| || |||||||||  | ||||| || ||||||
Sbjct: 1222445 cccctacgcctgggtggtgctccctcaaaggtaccaccagttttagcctcgtatgccctc 1222386

                                                                           
Query: 571     tcgttgctctccacaaggacagagagcctatcagtcatctggaagatcagtccctgcagc 630
               || ||||||||||||||||| |||||| |||||| |||||||||||  |||||||| || 
Sbjct: 1222385 tcattgctctccacaaggactgagagcttatcagccatctggaagagtagtccctgaagt 1222326

                                                                           
Query: 631     ctggtttgatccacgttctggaatacaatgcactttgttggctggtcccagcttgcatga 690
               || |||||||| ||||| ||||| |  |||||||| || || || |||||||| ||||||
Sbjct: 1222325 ctagtttgatcaacgttgtggaaaatgatgcacttggtaggttgatcccagctggcatga 1222266

                   
Query: 691     agct 694
               ||||
Sbjct: 1222265 agct 1222262



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                              
Query: 322     ccatcctggaaccgagaaccaccaccatagccgccacgggaaccctg 368
               ||||||||||| || ||||||||||||||||| ||||| ||||||||
Sbjct: 1222640 ccatcctggaagcgtgaaccaccaccatagcctccacgagaaccctg 1222594
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>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0575F10
          Length = 150462

 Score =  178 bits (90), Expect = 2e-41
 Identities = 206/244 (84%), Gaps = 3/244 (1%)
 Strand = Plus / Minus

                                                                         
Query: 454   ccttgtgacgatacaaagttctcctgccactttcccatattggacgagtcttga---tca 510
             |||||||| ||||| ||||||||||||||||| ||||  ||||| ||||| |||   |||
Sbjct: 53596 ccttgtgatgatacgaagttctcctgccacttgcccaagttggatgagtcctgagcatca 53537

                                                                         
Query: 511   cccctgcgcctgggtggtgcaccctcaagggcaccaccagtcctggcctcatacgccctc 570
             ||||| |||||||||||||| ||||||| || |||||||||  | ||||| || ||||||
Sbjct: 53536 cccctacgcctgggtggtgctccctcaaaggtaccaccagttttagcctcgtatgccctc 53477

                                                                         
Query: 571   tcgttgctctccacaaggacagagagcctatcagtcatctggaagatcagtccctgcagc 630
             || ||||||||||||||||| |||||| |||||| |||||||||||  |||||||| || 
Sbjct: 53476 tcattgctctccacaaggactgagagcttatcagccatctggaagagtagtccctgaagt 53417

                                                                         
Query: 631   ctggtttgatccacgttctggaatacaatgcactttgttggctggtcccagcttgcatga 690
             || |||||||| ||||| ||||| |  |||||||| || || || |||||||| ||||||
Sbjct: 53416 ctagtttgatcaacgttgtggaaaatgatgcacttggtaggttgatcccagctggcatga 53357

                 
Query: 691   agct 694
             ||||
Sbjct: 53356 agct 53353



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                            
Query: 322   ccatcctggaaccgagaaccaccaccatagccgccacgggaaccctg 368
             ||||||||||| || ||||||||||||||||| ||||| ||||||||
Sbjct: 53731 ccatcctggaagcgtgaaccaccaccatagcctccacgagaaccctg 53685
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>gb|BT018635.1| Zea mays clone EL01N0504B06.d mRNA sequence
          Length = 1657

 Score =  151 bits (76), Expect = 4e-33
 Identities = 157/184 (85%)
 Strand = Plus / Minus

                                                                        
Query: 511  cccctgcgcctgggtggtgcaccctcaagggcaccaccagtcctggcctcatacgccctc 570
            |||||||||||||| ||| | ||||| || ||||||||||| || ||||| || ||||||
Sbjct: 1120 cccctgcgcctgggcggtaccccctcgagagcaccaccagttcttgcctcgtatgccctc 1061

                                                                        
Query: 571  tcgttgctctccacaaggacagagagcctatcagtcatctggaagatcagtccctgcagc 630
            || ||| ||||||| ||||| |||||| |||| | |||||||||||  || ||||| |||
Sbjct: 1060 tcattgatctccaccaggaccgagagcttatctgccatctggaagagtagcccctgaagc 1001

                                                                        
Query: 631  ctggtttgatccacgttctggaatacaatgcactttgttggctggtcccagcttgcatga 690
            || ||||| |||||  | |||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 1000 ctagtttggtccacactatggaatacgatgcactttgttggctggtcccagctagcatga 941

                
Query: 691  agct 694
            ||||
Sbjct: 940  agct 937



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 457  tgtgacgatacaaagttctcctgccactttcccatatt 494
            |||||||| |||||||| ||||||||||||||||||||
Sbjct: 1171 tgtgacgagacaaagttatcctgccactttcccatatt 1134



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 303  agactggttgcgagaccttccatcctggaaccgagaaccaccaccatagccgccacggga 362
            |||||||||||||  |||| ||||||| ||||  ||| | ||||||||||| || ||| |
Sbjct: 1331 agactggttgcgaccccttgcatcctgaaaccttgaaacgccaccatagcccccgcggta 1272

                  
Query: 363  accctg 368
            ||||||
Sbjct: 1271 accctg 1266
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>gb|AY109680.1| Zea mays CL17699_1 mRNA sequence
          Length = 1483

 Score =  131 bits (66), Expect = 3e-27
 Identities = 132/154 (85%)
 Strand = Plus / Minus

                                                                       
Query: 541 gcaccaccagtcctggcctcatacgccctctcgttgctctccacaaggacagagagccta 600
           ||||||||||| || ||||| || |||||||| ||| ||||||| ||||| |||||| ||
Sbjct: 895 gcaccaccagttcttgcctcgtatgccctctcattgatctccaccaggaccgagagctta 836

                                                                       
Query: 601 tcagtcatctggaagatcagtccctgcagcctggtttgatccacgttctggaatacaatg 660
           || | |||||||||||  || ||||| ||||| ||||| |||||  | |||||||| |||
Sbjct: 835 tctgccatctggaagagtagcccctgaagcctagtttggtccacactatggaatacgatg 776

                                             
Query: 661 cactttgttggctggtcccagcttgcatgaagct 694
           ||||||||||||||||||||||| ||||||||||
Sbjct: 775 cactttgttggctggtcccagctagcatgaagct 742



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 457 tgtgacgatacaaagttctcctgccactttcccatatt 494
           |||||||| |||||||| ||||||||||||||||||||
Sbjct: 976 tgtgacgagacaaagttatcctgccactttcccatatt 939
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>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence
          Length = 139778

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 667   gttggctggtcccagcttgcatgaagct 694
             |||||||| |||||||||||||||||||
Sbjct: 24393 gttggctgatcccagcttgcatgaagct 24366
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>gb|AF106931.1| Medicago truncatula putative translation initiation protein (AM3-2)
           mRNA, complete cds
          Length = 1395

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 667 gttggctggtcccagcttgcatgaagct 694
           |||||||| |||||||||||||||||||
Sbjct: 708 gttggctgatcccagcttgcatgaagct 681
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>emb|AL954241.1| Pan troglodytes chromosome 22 clone RP43-181I17 map 22q22.2-q22.3,
             complete sequence
          Length = 212865

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   gaagctacaaaaatatagcaa 156
             |||||||||||||||||||||
Sbjct: 27917 gaagctacaaaaatatagcaa 27897
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>emb|AL954240.1| Pan troglodytes chromosome 22 clone PTB-045O21 map 22q22.2-q22.3,
              complete sequence
          Length = 164591

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 136    gaagctacaaaaatatagcaa 156
              |||||||||||||||||||||
Sbjct: 111168 gaagctacaaaaatatagcaa 111148
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>gb|AC022568.7| Homo sapiens chromosome 8, clone RP11-10H3, complete sequence
          Length = 138073

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 122   tatgacagataacagaagcta 142
             |||||||||||||||||||||
Sbjct: 29065 tatgacagataacagaagcta 29045
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>gb|AY240946.1| Bifidobacterium adolescentis alpha-amylase (amyB) gene, partial cds
          Length = 2477

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 437 caccgccgcggcgaccgcctt 457
           |||||||||||||||||||||
Sbjct: 765 caccgccgcggcgaccgcctt 785
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>gb|AC159001.2| Mus musculus BAC clone RP24-221A23 from chromosome 9, complete sequence
          Length = 161507

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 602    cagtcatctggaagatcagtc 622
              |||||||||||||||||||||
Sbjct: 129533 cagtcatctggaagatcagtc 129553
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>emb|CT025608.12| Mouse DNA sequence from clone RP23-292F17 on chromosome 9, complete
              sequence
          Length = 200204

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 602    cagtcatctggaagatcagtc 622
              |||||||||||||||||||||
Sbjct: 182503 cagtcatctggaagatcagtc 182483
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>gb|M27659.1|SCMESPAB S.haematobium eggshell protein gene ORFs
          Length = 1038

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 338 aaccaccaccatagccgccac 358
           |||||||||||||||||||||
Sbjct: 699 aaccaccaccatagccgccac 679
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>gb|M27658.1|SCMESPAA S.haematobium eggshell protein gene ORFs
          Length = 962

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 338 aaccaccaccatagccgccac 358
           |||||||||||||||||||||
Sbjct: 623 aaccaccaccatagccgccac 603
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>ref|NM_115473.2| Arabidopsis thaliana EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR
            3) AT3G56150 (EIF3C) mRNA, complete cds
          Length = 3033

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 666  tgttggctggtcccagcttgcatg 689
            ||||||||| ||||||||||||||
Sbjct: 2422 tgttggctgatcccagcttgcatg 2399
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>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0058P12, complete sequence
          Length = 173073

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 135   agaagctacaaaaatatagcaaac 158
             |||||||||||||| |||||||||
Sbjct: 52479 agaagctacaaaaaaatagcaaac 52456
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>gb|BC092206.1| Rattus norvegicus vesicle-associated membrane protein 1, mRNA (cDNA
            clone MGC:105480 IMAGE:7313343), complete cds
          Length = 2554

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 124  tgacagataacagaagctacaaaa 147
            ||||||||||||| ||||||||||
Sbjct: 1060 tgacagataacagtagctacaaaa 1037
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>ref|NM_013090.2| Rattus norvegicus vesicle-associated membrane protein 1 (Vamp1), mRNA
          Length = 2650

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 124  tgacagataacagaagctacaaaa 147
            ||||||||||||| ||||||||||
Sbjct: 1162 tgacagataacagtagctacaaaa 1139
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>gb|BC074471.1| Xenopus laevis cDNA clone IMAGE:6950803, partial cds
          Length = 1750

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 339 accaccaccatagccgccac 358
           ||||||||||||||||||||
Sbjct: 371 accaccaccatagccgccac 352
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>gb|AC145859.4| Pan troglodytes BAC clone RP43-6G18 from 7, complete sequence
          Length = 164503

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    aaagtggaaaatagtaactt 36
             ||||||||||||||||||||
Sbjct: 94763 aaagtggaaaatagtaactt 94782
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 436     ccaccgccgcggcgaccgcc 455
               ||||||||||||||||||||
Sbjct: 5002846 ccaccgccgcggcgaccgcc 5002865
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>gb|AC073272.7| Homo sapiens BAC clone RP11-590O19 from 7, complete sequence
          Length = 54594

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    aaagtggaaaatagtaactt 36
             ||||||||||||||||||||
Sbjct: 42633 aaagtggaaaatagtaactt 42614
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>gb|AC073193.10| Homo sapiens BAC clone RP11-175C14 from 7, complete sequence
          Length = 120436

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   agagcctcctctgccagcat 424
             ||||||||||||||||||||
Sbjct: 77407 agagcctcctctgccagcat 77388
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>emb|Z77249.2|HS358H7 Human DNA sequence from clone RP3-358H7 on chromosome X Contains a
              DEAD-box protein pseudogene and the gene for a novel
              E2F-like protein (LOC51270), complete sequence
          Length = 148864

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 611    ggaagatcagtccctgcagc 630
              ||||||||||||||||||||
Sbjct: 122744 ggaagatcagtccctgcagc 122725
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>emb|AL355361.39| Human DNA sequence from clone RP11-58N22 on chromosome 10 Contains a
             CpG island, complete sequence
          Length = 153070

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 400   tgcccagagcctcctctgcc 419
             ||||||||||||||||||||
Sbjct: 96844 tgcccagagcctcctctgcc 96825
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>gb|AY064006.1| Arabidopsis thaliana putative eukaryotic translation initiation
            factor 3 subunit 8 (At3g56150) mRNA, complete cds
          Length = 3012

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 666  tgttggctggtcccagcttgcatg 689
            ||||||||| ||||||||||||||
Sbjct: 2421 tgttggctgatcccagcttgcatg 2398
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 436     ccaccgccgcggcgaccgcc 455
               ||||||||||||||||||||
Sbjct: 3933054 ccaccgccgcggcgaccgcc 3933073
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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   ccaccgccgcggcgaccgcc 455
             ||||||||||||||||||||
Sbjct: 35362 ccaccgccgcggcgaccgcc 35381
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>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21
          Length = 99492

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 666   tgttggctggtcccagcttgcatg 689
             ||||||||| ||||||||||||||
Sbjct: 37135 tgttggctgatcccagcttgcatg 37158
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>emb|AJ426040.1|TRU426040 Takifugu rubripes vader gene, cetn gene, fgf2 gene, gfg gene and spaf
             gene, cosmid 196n09
          Length = 29053

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   ataacagaagctacaaaaatatag 153
             ||||||| ||||||||||||||||
Sbjct: 21269 ataacagtagctacaaaaatatag 21246
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>emb|AL928933.7| Mouse DNA sequence from clone RP23-419H6 on chromosome X, complete
              sequence
          Length = 171812

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    ccctggccacccctgtcatt 383
              ||||||||||||||||||||
Sbjct: 166570 ccctggccacccctgtcatt 166551
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>emb|CR361551.8| Zebrafish DNA sequence from clone CH211-224M9 in linkage group 1,
              complete sequence
          Length = 177606

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 647    tctggaatacaatgcacttt 666
              ||||||||||||||||||||
Sbjct: 136699 tctggaatacaatgcacttt 136718
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>gb|AC092954.4| Homo sapiens 3 BAC RP11-368I23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166452

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    caggaaaagtggaaaatagt 31
             ||||||||||||||||||||
Sbjct: 71940 caggaaaagtggaaaatagt 71959
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>gb|AF106930.1| Medicago truncatula putative translation initiation protein (AM3-1)
            mRNA, complete cds
          Length = 3199

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 667  gttggctggtcccagcttgcatgaagct 694
            ||||| || |||||||||||||||||||
Sbjct: 2597 gttggttgatcccagcttgcatgaagct 2570
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>gb|S82311.1| putative glycine-rich protein {clone CHEM 11} [Zea mays=maize, cv.
           INRA 258, mercuric chloride-treated, leaves, mRNA
           Partial, 149 nt]
          Length = 149

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 339 accaccaccatagccgccac 358
           ||||||||||||||||||||
Sbjct: 135 accaccaccatagccgccac 116



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 339 accaccaccatagccgccac 358
           ||||||||||||||||||||
Sbjct: 87  accaccaccatagccgccac 68
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 339      accaccaccatagccgccac 358
                ||||||||||||||||||||
Sbjct: 19173996 accaccaccatagccgccac 19173977
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 135     agaagctacaaaaatatagcaaac 158
               |||||||||||||| |||||||||
Sbjct: 4942414 agaagctacaaaaaaatagcaaac 4942437
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>gb|AF040102.1|AF040102 Arabidopsis thaliana eIF3c mRNA, complete cds
          Length = 2924

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 666  tgttggctggtcccagcttgcatg 689
            ||||||||| ||||||||||||||
Sbjct: 2379 tgttggctgatcccagcttgcatg 2356
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>dbj|AK119673.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-G08, full
           insert sequence
          Length = 812

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 339 accaccaccatagccgccac 358
           ||||||||||||||||||||
Sbjct: 204 accaccaccatagccgccac 185
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>dbj|AK099309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146P18, full
           insert sequence
          Length = 1027

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 339 accaccaccatagccgccac 358
           ||||||||||||||||||||
Sbjct: 452 accaccaccatagccgccac 433
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>emb|BX005039.11| Mouse DNA sequence from clone RP23-391M18 on chromosome 2, complete
              sequence
          Length = 145263

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 411    tcctctgccagcatagccag 430
              ||||||||||||||||||||
Sbjct: 118280 tcctctgccagcatagccag 118261
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>dbj|AK064923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N14, full
           insert sequence
          Length = 1069

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 339 accaccaccatagccgccac 358
           ||||||||||||||||||||
Sbjct: 461 accaccaccatagccgccac 442
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>gb|AY103756.1| Zea mays PCO151485 mRNA sequence
          Length = 637

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 accaccaccatagccgccac 358
           ||||||||||||||||||||
Sbjct: 610 accaccaccatagccgccac 629
to top
>gb|BT001961.1| Arabidopsis thaliana clone U10766 putative eukaryotic translation
            initiation factor 3 subunit 8 (At3g56150) mRNA, complete
            cds
          Length = 2734

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 666  tgttggctggtcccagcttgcatg 689
            ||||||||| ||||||||||||||
Sbjct: 2298 tgttggctgatcccagcttgcatg 2275
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 135     agaagctacaaaaatatagcaaac 158
               |||||||||||||| |||||||||
Sbjct: 4961198 agaagctacaaaaaaatagcaaac 4961221
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 339      accaccaccatagccgccac 358
                ||||||||||||||||||||
Sbjct: 19100223 accaccaccatagccgccac 19100204
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>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127026

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   accaccaccatagccgccac 358
             ||||||||||||||||||||
Sbjct: 51983 accaccaccatagccgccac 52002
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>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 136155

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  accaccaccatagccgccac 358
            ||||||||||||||||||||
Sbjct: 7326 accaccaccatagccgccac 7307
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>emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chromosome 11, complete
              sequence
          Length = 201673

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 5      gcagaaacaggaaaagtggaaaat 28
              ||||| ||||||||||||||||||
Sbjct: 162335 gcagagacaggaaaagtggaaaat 162312
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>gb|M24104.1|RATVAMPIR Rat vesicle associated membrane protein (VAMP-1) mRNA, complete cds
          Length = 1482

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 124  tgacagataacagaagctacaaaa 147
            ||||||||||||| ||||||||||
Sbjct: 1064 tgacagataacagtagctacaaaa 1041


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,871,189
Number of Sequences: 3902068
Number of extensions: 5871189
Number of successful extensions: 165946
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 165552
Number of HSP's gapped (non-prelim): 384
length of query: 706
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 683
effective length of database: 17,143,297,704
effective search space: 11708872331832
effective search space used: 11708872331832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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