ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
2dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
3ref|NM_179741.1| Arabidopsis thaliana catalytic/ hydrolase AT2G2... 60 8e-06
4gb|AY099804.1| Arabidopsis thaliana unknown protein (At2g25860:A... 60 8e-06
5dbj|AK176615.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 60 8e-06
6dbj|AK118762.1| Arabidopsis thaliana At2g25860 mRNA for unknown ... 60 8e-06
7gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 ma... 56 1e-04
8gb|BT016708.1| Zea mays clone Contig541 mRNA sequence 48 0.029
9gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence 48 0.029
10gb|BT016274.1| Zea mays clone Contig107 mRNA sequence 48 0.029
11gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, com... 48 0.029
12gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiq... 48 0.029
13emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial ... 48 0.029
14gb|AY122071.1| Drosophila melanogaster AT15262 full insert cDNA 48 0.029
15gb|AY057456.1| Stizostedion vitreum clone C1-3 major histocompat... 48 0.029
16gb|AC099497.2| Homo sapiens chromosome 5 clone RP11-139A10, comp... 48 0.029
17gb|AC099554.2| Homo sapiens chromosome 5 clone RP11-61G23, compl... 48 0.029
18gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA ... 48 0.029
19gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA... 48 0.029
20gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subu... 48 0.029
21gb|AY551094.1| Crassostrea gigas cavortin mRNA, complete cds 46 0.12
22gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence 46 0.12
23gb|AY857765.1| Triticum monococcum glyceraldehyde-3-phosphate de... 46 0.12
24gb|BT015300.1| Drosophila melanogaster AT22779 full insert cDNA 46 0.12
25gb|AC134910.5| Mus musculus BAC clone RP23-405O11 from chromosom... 46 0.12
26gb|AY223112.1| Schistosoma japonicum clone ZZD1382 mRNA sequence 46 0.12
27gb|AY222865.1| Schistosoma japonicum clone ZZD1198 mRNA sequence 46 0.12
28gb|AF526250.1| Chlamys farreri clone iolscfcl363ct379cn399 ribos... 46 0.12
29emb|AJ505009.1|DLA505009 Dicentrarchus labrax partially processe... 46 0.12
30gb|AY113216.1| Drosophila melanogaster AT07420 full insert cDNA 46 0.12
31dbj|AB228520.1| Aspergillus oryzae cDNA, contig sequence: AoEST5393 46 0.12
32gb|BC002907.2| Homo sapiens hypothetical protein FLJ20512, mRNA ... 46 0.12
33gb|AY849619.1| Magnaporthe grisea transporter-like protein mRNA,... 46 0.12
34gb|BT015177.1| Drosophila melanogaster SD19814 full insert cDNA 44 0.46
35emb|AJ420188.1|FSY420188 Fagus sylvatica partial mRNA for ACC sy... 44 0.46
36gb|AY050236.1| Drosophila melanogaster SD02116 full length cDNA 44 0.46
37emb|BX821259.1|CNS0A8DU Arabidopsis thaliana Full-length cDNA Co... 44 0.46
38gb|AF304353.1|AF304353 Lampetra fluviatilis endophilin SH3p4 mRN... 44 0.46
39emb|AL590328.2|CNS07EG5 Human chromosome 14 DNA sequence BAC R-8... 44 0.46
40emb|AL121839.3|CNS01DSQ Human chromosome 14 DNA sequence BAC R-7... 44 0.46
41gb|AF049750.1|AF049750 Monodelphis domestica ModoVL10c Ig lambda... 44 0.46
42gb|AC168060.4| Mus musculus BAC clone RP23-305A9 from chromosome... 42 1.8
43gb|BC081715.1| Rattus norvegicus translin-associated factor X, m... 42 1.8
44gb|BC004611.1| Mus musculus translin-associated factor X, mRNA (... 42 1.8
45gb|AY533301.1| Petroselinum crispum mitogen-activated protein ki... 42 1.8
46emb|AJ249225.1|XLA249225 Xenopus laevis mRNA for XFD-4' protein ... 42 1.8
47gb|AC102050.13| Mus musculus chromosome 8, clone RP23-389O4, com... 42 1.8
48gb|AF460237.1| Solanum tuberosum Kunitz-type enzyme inhibitor S9... 42 1.8
49ref|XM_001002375.1| PREDICTED: Mus musculus translin-associated ... 42 1.8
50gb|CP000302.1| Shewanella denitrificans OS217, complete genome 42 1.8
51emb|AL672234.27| Mouse DNA sequence from clone RP23-356I16 on ch... 42 1.8
52emb|AJ312288.1|CEL312288 Caenorhabditis elegans partial mRNA for... 42 1.8
53dbj|AB080201.1| Caenorhabditis elegans mRNA for C2-RGS protein, ... 42 1.8
54dbj|AK146339.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-... 42 1.8
55gb|AF465934.1| Elaeis oleifera DNA binding protein (DNAbp) mRNA,... 42 1.8
56gb|AF456360.1|AF456360 Caenorhabditis elegans immunoglobulin dom... 42 1.8
57dbj|AK159223.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 42 1.8
58ref|NM_022262.3| Rattus norvegicus translin-associated factor X ... 42 1.8
59dbj|AK030407.1| Mus musculus adult male pituitary gland cDNA, RI... 42 1.8
60gb|AF343876.1|AF343876 Clonorchis sinensis proline-rich antigen ... 42 1.8
61gb|AF302079.1|AF302079 Homo sapiens HSP22-like protein interacti... 42 1.8
62gb|AY074433.1| Trichosurus vulpecula clone TrvuVK172 immunoglobu... 42 1.8
63gb|AY074427.1| Trichosurus vulpecula clone TrvuVK138 immunoglobu... 42 1.8
64gb|AF187040.1|AF187040 Mus musculus translin associated protein ... 42 1.8
65dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GT... 42 1.8
66dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 42 1.8
67gb|AF177671.1|AF177671 Rattus norvegicus ATX1 homolog protein Ra... 42 1.8
68gb|AF130979.1|AF130979 Homo sapiens SH3 domain-containing protei... 42 1.8
69gb|AY109271.1| Zea mays PCO074636 mRNA sequence 42 1.8
70gb|AY106084.1| Zea mays PCO072275 mRNA sequence 42 1.8
71gb|AF026844.1|AF026844 Homo sapiens ribosomal protein L41 mRNA, ... 42 1.8
72gb|U71195.1|GMU71195 Glycine max napin-type 2S albumin 3 mRNA, c... 42 1.8
73dbj|AB080019.1| Xenopus laevis mRNA for galectin family xgalecti... 42 1.8
74gb|AF074334.1|AF074334 Drosophila melanogaster cyclin H homolog ... 42 1.8
75ref|NM_016909.1| Mus musculus translin-associated factor X (Tsna... 42 1.8
76gb|U57682.1|RCU57682 Rhodobacter capsulatus cosmids 143-147, com... 42 1.8
77dbj|AB018544.1| Hydra magnipapillata mRNA for Hym-176 preprohorm... 42 1.8
78gb|BC099839.1| Mus musculus seizure related 6 homolog like, mRNA... 40 7.2
79gb|BT016288.1| Zea mays clone Contig121 mRNA sequence 40 7.2
80gb|AE017263.1| Mesoplasma florum L1 complete genome 40 7.2
81gb|AC120873.7| Mus musculus chromosome 12, clone RP23-283P14, co... 40 7.2
82gb|BC071903.1| Homo sapiens cDNA clone IMAGE:6597035, containing... 40 7.2
83gb|AF499716.1| Thellungiella halophila ethylene responsive eleme... 40 7.2
84gb|DP000038.2| Colobus guereza target 106 genomic scaffold 40 7.2
85gb|BC021057.1| Homo sapiens cDNA clone IMAGE:2959663, **** WARNI... 40 7.2
86ref|XM_787573.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.2
87gb|AC174609.3| Cavia porcellus clone CH234-34N9, complete sequence 40 7.2
88emb|AL163532.8| Human DNA sequence from clone RP11-226D23 on chr... 40 7.2
89emb|AL137851.12| Human DNA sequence from clone RP11-6H18 on chro... 40 7.2
90dbj|AB230081.1| Aspergillus oryzae cDNA, contig sequence: AoEST6968 40 7.2
91dbj|AB242299.1| Asterias amurensis PKA-R mRNA for protein kinase... 40 7.2
92gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 ma... 40 7.2
93gb|AC008199.4|AC008199 Drosophila melanogaster, chromosome 3R, r... 40 7.2
94gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Canc... 40 7.2
95emb|AJ302017.1|PAB302017 Picea abies mRNA for putative plastidia... 40 7.2
96emb|AL513422.2|HS527D15 Homo sapiens chromosome 9 BAC RP11-527D1... 40 7.2
97gb|BC030047.1| Mus musculus cDNA clone IMAGE:1179272, with appar... 40 7.2
98gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome 40 7.2
99gb|AE003741.2| Drosophila melanogaster chromosome 3R, section 79... 40 7.2
100gb|AC124387.5| Mus musculus BAC clone RP24-426N3 from chromosome... 40 7.2
101gb|AC163693.3| Mus musculus BAC clone RP24-70O15 from chromosome... 40 7.2
102gb|AC130716.3| Mus musculus BAC clone RP23-463B12 from 3, comple... 40 7.2
103emb|CR974487.10| Mouse DNA sequence from clone RP23-136M7 on chr... 40 7.2
104emb|AL840635.6| Mouse DNA sequence from clone RP23-418D21 on chr... 40 7.2
105gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 7.2 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  129 bits (65), Expect = 1e-26
 Identities = 146/173 (84%)
 Strand = Plus / Minus

                                                                            
Query: 313      ctgttagaaagcgtagtcatagatggcctgcgcaactccatcttcgtcattggtggcgcc 372
                |||||||||||| ||||| || || ||||| || ||||||||||| ||||| ||||| ||
Sbjct: 30878269 ctgttagaaagcatagtcgtaaatagcctgtgcgactccatcttcatcattagtggcacc 30878210

                                                                            
Query: 373      gatcacgttcgccactgctttggtcttctcagcgccgtttgccagagcgacgcccagtga 432
                 || |  || |||||||||||||| |||||||  || ||||| || || || |||| |||
Sbjct: 30878209 aattatatttgccactgctttggttttctcagacccatttgcaagcgcaacacccaatga 30878150

                                                                     
Query: 433      tgctagctgtagcatttctatgtcattctctccatctccaattgccattacct 485
                ||||||||||||||||||||||||||| |||||||| || || ||||||||||
Sbjct: 30878149 tgctagctgtagcatttctatgtcattttctccatccccgatagccattacct 30878097
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>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0638D12
          Length = 161277

 Score =  129 bits (65), Expect = 1e-26
 Identities = 146/173 (84%)
 Strand = Plus / Minus

                                                                         
Query: 313   ctgttagaaagcgtagtcatagatggcctgcgcaactccatcttcgtcattggtggcgcc 372
             |||||||||||| ||||| || || ||||| || ||||||||||| ||||| ||||| ||
Sbjct: 78636 ctgttagaaagcatagtcgtaaatagcctgtgcgactccatcttcatcattagtggcacc 78577

                                                                         
Query: 373   gatcacgttcgccactgctttggtcttctcagcgccgtttgccagagcgacgcccagtga 432
              || |  || |||||||||||||| |||||||  || ||||| || || || |||| |||
Sbjct: 78576 aattatatttgccactgctttggttttctcagacccatttgcaagcgcaacacccaatga 78517

                                                                  
Query: 433   tgctagctgtagcatttctatgtcattctctccatctccaattgccattacct 485
             ||||||||||||||||||||||||||| |||||||| || || ||||||||||
Sbjct: 78516 tgctagctgtagcatttctatgtcattttctccatccccgatagccattacct 78464
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>ref|NM_179741.1| Arabidopsis thaliana catalytic/ hydrolase AT2G25870 mRNA, complete
            cds
          Length = 1951

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 443  agcatttctatgtcattctctccatctccaattgccattacctcgtccgg 492
            ||||| ||||||||||| |||||||||||||| ||||||| ||| |||||
Sbjct: 1672 agcatctctatgtcattttctccatctccaatcgccattatctcatccgg 1623
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>gb|AY099804.1| Arabidopsis thaliana unknown protein (At2g25860:At2g25870) mRNA,
            complete cds
          Length = 1949

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 443  agcatttctatgtcattctctccatctccaattgccattacctcgtccgg 492
            ||||| ||||||||||| |||||||||||||| ||||||| ||| |||||
Sbjct: 1672 agcatctctatgtcattttctccatctccaatcgccattatctcatccgg 1623
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>dbj|AK176615.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-14-B08
          Length = 1967

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 443  agcatttctatgtcattctctccatctccaattgccattacctcgtccgg 492
            ||||| ||||||||||| |||||||||||||| ||||||| ||| |||||
Sbjct: 1680 agcatctctatgtcattttctccatctccaatcgccattatctcatccgg 1631
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>dbj|AK118762.1| Arabidopsis thaliana At2g25860 mRNA for unknown protein, complete
            cds, clone: RAFL21-10-I04
          Length = 1946

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 443  agcatttctatgtcattctctccatctccaattgccattacctcgtccgg 492
            ||||| ||||||||||| |||||||||||||| ||||||| ||| |||||
Sbjct: 1667 agcatctctatgtcattttctccatctccaatcgccattatctcatccgg 1618
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>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete
             sequence
          Length = 102004

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 443   agcatttctatgtcattctctccatctccaattgccatta 482
             ||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 41797 agcatctctatgtcattttctccatctccaatcgccatta 41836
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>gb|BT016708.1| Zea mays clone Contig541 mRNA sequence
          Length = 1331

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||||||||||||||||
Sbjct: 32  cctcgtgccgattcggcacgaggc 9



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||| ||||||||||||
Sbjct: 10  cctcgtgccgaatcggcacgaggc 33
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>gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence
          Length = 780

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||||||||||||||||
Sbjct: 31  cctcgtgccgattcggcacgaggc 8
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>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence
          Length = 1486

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||||||||||||||||
Sbjct: 496 cctcgtgccgattcggcacgaggc 473



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||| ||||||||||||
Sbjct: 474 cctcgtgccgaatcggcacgaggc 497
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>gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, complete cds
          Length = 568

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||||||||||||||||
Sbjct: 106 cctcgtgccgattcggcacgaggc 83
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>gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiquinone
           oxidoreductase 10 kDa subunit precursor mRNA, complete
           cds; nuclear gene for mitochondrial product
          Length = 868

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||||||||||||||||
Sbjct: 30  cctcgtgccgattcggcacgaggc 7



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||| ||||||||||||
Sbjct: 8   cctcgtgccgaatcggcacgaggc 31
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>emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial atp3 gene for ATP
           synthase gamma chain, mitochondrial precursor
          Length = 1225

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||||||||||||||||
Sbjct: 32  cctcgtgccgattcggcacgaggc 9
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>gb|AY122071.1| Drosophila melanogaster AT15262 full insert cDNA
          Length = 1224

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||||||||||||||||
Sbjct: 1   cctcgtgccgattcggcacgaggc 24
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>gb|AY057456.1| Stizostedion vitreum clone C1-3 major histocompatibility class I
            receptor mRNA, complete cds
          Length = 1293

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 507  cctcgtgccgattcggcacgaggc 530
            ||||||||||||||||||||||||
Sbjct: 1111 cctcgtgccgattcggcacgaggc 1088



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 501  agagatcctcgtgccgattcggcacgagg 529
            ||||| ||||||||||| |||||||||||
Sbjct: 1083 agagagcctcgtgccgaatcggcacgagg 1111
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>gb|AC099497.2| Homo sapiens chromosome 5 clone RP11-139A10, complete sequence
          Length = 165884

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 449    tctatgtcattctctccatctcca 472
              ||||||||||||||||||||||||
Sbjct: 138545 tctatgtcattctctccatctcca 138522
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>gb|AC099554.2| Homo sapiens chromosome 5 clone RP11-61G23, complete sequence
          Length = 164920

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 449    tctatgtcattctctccatctcca 472
              ||||||||||||||||||||||||
Sbjct: 108556 tctatgtcattctctccatctcca 108533
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>gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA clone
           IMAGE:3940750), complete cds
          Length = 847

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||||||||||||||||
Sbjct: 1   cctcgtgccgattcggcacgaggc 24
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>gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA sequence
          Length = 1502

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 507  cctcgtgccgattcggcacgaggc 530
            ||||||||||||||||||||||||
Sbjct: 1398 cctcgtgccgattcggcacgaggc 1421
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>gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subunit c isoform
           mRNA, partial cds
          Length = 911

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||||||||||||||||
Sbjct: 33  cctcgtgccgattcggcacgaggc 10
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>gb|AY551094.1| Crassostrea gigas cavortin mRNA, complete cds
          Length = 778

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 507 cctcgtgccgattcggcacgagg 529
           |||||||||||||||||||||||
Sbjct: 1   cctcgtgccgattcggcacgagg 23



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 506 tcctcgtgccgattcggcacgagg 529
           |||||||||||| |||||||||||
Sbjct: 24  tcctcgtgccgaatcggcacgagg 1
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>gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence
          Length = 1546

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 507  cctcgtgccgattcggcacgagg 529
            |||||||||||||||||||||||
Sbjct: 1138 cctcgtgccgattcggcacgagg 1116
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>gb|AY857765.1| Triticum monococcum glyceraldehyde-3-phosphate dehydrogenase (GPD1)
           mRNA, partial cds
          Length = 630

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 507 cctcgtgccgattcggcacgagg 529
           |||||||||||||||||||||||
Sbjct: 23  cctcgtgccgattcggcacgagg 1



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||| ||||||||||||
Sbjct: 1   cctcgtgccgaatcggcacgaggc 24
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>gb|BT015300.1| Drosophila melanogaster AT22779 full insert cDNA
          Length = 1541

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 507 cctcgtgccgattcggcacgagg 529
           |||||||||||||||||||||||
Sbjct: 23  cctcgtgccgattcggcacgagg 1



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||| ||||||||||||
Sbjct: 1   cctcgtgccgaatcggcacgaggc 24
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>gb|AC134910.5| Mus musculus BAC clone RP23-405O11 from chromosome 5, complete sequence
          Length = 200538

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 20    caaggggtacaaagtagcatggc 42
             |||||||||||||||||||||||
Sbjct: 85679 caaggggtacaaagtagcatggc 85657
to top
>gb|AY223112.1| Schistosoma japonicum clone ZZD1382 mRNA sequence
          Length = 1276

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 507 cctcgtgccgattcggcacgagg 529
           |||||||||||||||||||||||
Sbjct: 1   cctcgtgccgattcggcacgagg 23
to top
>gb|AY222865.1| Schistosoma japonicum clone ZZD1198 mRNA sequence
          Length = 711

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 507 cctcgtgccgattcggcacgagg 529
           |||||||||||||||||||||||
Sbjct: 23  cctcgtgccgattcggcacgagg 1



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||| ||||||||||||
Sbjct: 1   cctcgtgccgaatcggcacgaggc 24
to top
>gb|AF526250.1| Chlamys farreri clone iolscfcl363ct379cn399 ribosomal protein S20
           mRNA, complete cds
          Length = 536

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 507 cctcgtgccgattcggcacgagg 529
           |||||||||||||||||||||||
Sbjct: 54  cctcgtgccgattcggcacgagg 76



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 506 tcctcgtgccgattcggcacgagg 529
           |||||||||||| |||||||||||
Sbjct: 77  tcctcgtgccgaatcggcacgagg 54
to top
>emb|AJ505009.1|DLA505009 Dicentrarchus labrax partially processed transcript RNA for
           oestrogen receptor alpha (ERalpha gene)
          Length = 3812

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 506 tcctcgtgccgattcggcacgag 528
           |||||||||||||||||||||||
Sbjct: 9   tcctcgtgccgattcggcacgag 31
to top
>gb|AY113216.1| Drosophila melanogaster AT07420 full insert cDNA
          Length = 1395

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 507 cctcgtgccgattcggcacgagg 529
           |||||||||||||||||||||||
Sbjct: 23  cctcgtgccgattcggcacgagg 1
to top
>dbj|AB228520.1| Aspergillus oryzae cDNA, contig sequence: AoEST5393
          Length = 731

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 507 cctcgtgccgattcggcacgagg 529
           |||||||||||||||||||||||
Sbjct: 23  cctcgtgccgattcggcacgagg 1
to top
>gb|BC002907.2| Homo sapiens hypothetical protein FLJ20512, mRNA (cDNA clone
           MGC:10300 IMAGE:3941377), complete cds
          Length = 707

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 507 cctcgtgccgattcggcacgagg 529
           |||||||||||||||||||||||
Sbjct: 23  cctcgtgccgattcggcacgagg 1



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||| ||||||||||||
Sbjct: 1   cctcgtgccgaatcggcacgaggc 24
to top
>gb|AY849619.1| Magnaporthe grisea transporter-like protein mRNA, complete cds
          Length = 1770

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 507 cctcgtgccgattcggcacgagg 529
           |||||||||||||||||||||||
Sbjct: 2   cctcgtgccgattcggcacgagg 24



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           ||||||||||| ||||||||||||
Sbjct: 24  cctcgtgccgaatcggcacgaggc 1
to top
>gb|BT015177.1| Drosophila melanogaster SD19814 full insert cDNA
          Length = 5154

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 508 ctcgtgccgattcggcacgagg 529
           ||||||||||||||||||||||
Sbjct: 1   ctcgtgccgattcggcacgagg 22
to top
>emb|AJ420188.1|FSY420188 Fagus sylvatica partial mRNA for ACC synthase 1.1 (acs1.1 gene)
          Length = 941

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 507 cctcgtgccgattcggcacgag 528
           ||||||||||||||||||||||
Sbjct: 22  cctcgtgccgattcggcacgag 1
to top
>gb|AY050236.1| Drosophila melanogaster SD02116 full length cDNA
          Length = 2338

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 508 ctcgtgccgattcggcacgagg 529
           ||||||||||||||||||||||
Sbjct: 1   ctcgtgccgattcggcacgagg 22
to top
>emb|BX821259.1|CNS0A8DU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL2ZG07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 549

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 443 agcatttctatgtcattctctccatctccaattgccattacctcgtccgg 492
           ||||| ||||| | ||| |||||||||||||| ||||||| ||| |||||
Sbjct: 232 agcatctctatttgattttctccatctccaatcgccattatctcatccgg 183
to top
>gb|AF304353.1|AF304353 Lampetra fluviatilis endophilin SH3p4 mRNA, complete cds
          Length = 1337

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 507  cctcgtgccgattcggcacgag 528
            ||||||||||||||||||||||
Sbjct: 1253 cctcgtgccgattcggcacgag 1274
to top
>emb|AL590328.2|CNS07EG5 Human chromosome 14 DNA sequence BAC R-818K5 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175210

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 245    aaaacttgttatttggcaacaa 266
              ||||||||||||||||||||||
Sbjct: 171108 aaaacttgttatttggcaacaa 171087
to top
>emb|AL121839.3|CNS01DSQ Human chromosome 14 DNA sequence BAC R-747H7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 200853

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 245   aaaacttgttatttggcaacaa 266
             ||||||||||||||||||||||
Sbjct: 67090 aaaacttgttatttggcaacaa 67069
to top
>gb|AF049750.1|AF049750 Monodelphis domestica ModoVL10c Ig lambda light chain (Igl@) mRNA,
           complete cds
          Length = 775

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 508 ctcgtgccgattcggcacgagg 529
           ||||||||||||||||||||||
Sbjct: 9   ctcgtgccgattcggcacgagg 30
to top
>gb|AC168060.4| Mus musculus BAC clone RP23-305A9 from chromosome 8, complete sequence
          Length = 177422

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 73     gattgaagaatgttttacaga 93
              |||||||||||||||||||||
Sbjct: 133251 gattgaagaatgttttacaga 133231
to top
>gb|BC081715.1| Rattus norvegicus translin-associated factor X, mRNA (cDNA clone
            MGC:93125 IMAGE:7130295), complete cds
          Length = 2290

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 73   gattgaagaatgttttacaga 93
            |||||||||||||||||||||
Sbjct: 2208 gattgaagaatgttttacaga 2228
to top
>gb|BC004611.1| Mus musculus translin-associated factor X, mRNA (cDNA clone MGC:7979
            IMAGE:3585400), complete cds
          Length = 2309

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 73   gattgaagaatgttttacaga 93
            |||||||||||||||||||||
Sbjct: 2236 gattgaagaatgttttacaga 2256
to top
>gb|AY533301.1| Petroselinum crispum mitogen-activated protein kinase kinase 2
           (MKK2) mRNA, complete cds
          Length = 1460

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 15  ctcgtgccgattcggcacgag 35
to top
>emb|AJ249225.1|XLA249225 Xenopus laevis mRNA for XFD-4' protein (fd-4' gene)
          Length = 2385

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 1   ctcgtgccgattcggcacgag 21
to top
>gb|AC102050.13| Mus musculus chromosome 8, clone RP23-389O4, complete sequence
          Length = 203942

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 73     gattgaagaatgttttacaga 93
              |||||||||||||||||||||
Sbjct: 179512 gattgaagaatgttttacaga 179532
to top
>gb|AF460237.1| Solanum tuberosum Kunitz-type enzyme inhibitor S9C11 mRNA, complete
           cds
          Length = 774

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 1   ctcgtgccgattcggcacgag 21
to top
>ref|XM_001002375.1| PREDICTED: Mus musculus translin-associated factor X (Tsnax), mRNA
          Length = 2080

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 73   gattgaagaatgttttacaga 93
            |||||||||||||||||||||
Sbjct: 2007 gattgaagaatgttttacaga 2027
to top
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 257     ttggcaacaacactgggaaga 277
               |||||||||||||||||||||
Sbjct: 1534606 ttggcaacaacactgggaaga 1534626
to top
>emb|AL672234.27| Mouse DNA sequence from clone RP23-356I16 on chromosome 8, complete
              sequence
          Length = 221012

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 73     gattgaagaatgttttacaga 93
              |||||||||||||||||||||
Sbjct: 175815 gattgaagaatgttttacaga 175835
to top
>emb|AJ312288.1|CEL312288 Caenorhabditis elegans partial mRNA for putative transcription
           factor (ceh-43 gene)
          Length = 1039

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 1   ctcgtgccgattcggcacgag 21
to top
>dbj|AB080201.1| Caenorhabditis elegans mRNA for C2-RGS protein, complete cds
          Length = 2427

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 31  ctcgtgccgattcggcacgag 11
to top
>dbj|AK146339.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched
            library, clone:I730058E08 product:translin-associated
            factor X, full insert sequence
          Length = 2326

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 73   gattgaagaatgttttacaga 93
            |||||||||||||||||||||
Sbjct: 2267 gattgaagaatgttttacaga 2287
to top
>gb|AF465934.1| Elaeis oleifera DNA binding protein (DNAbp) mRNA, complete cds
          Length = 1601

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 1   ctcgtgccgattcggcacgag 21
to top
>gb|AF456360.1|AF456360 Caenorhabditis elegans immunoglobulin domain-containing protein
           F02G3.1 mRNA, complete cds
          Length = 3261

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 29  ctcgtgccgattcggcacgag 9
to top
>dbj|AK159223.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420010K18 product:translin-associated
            factor X, full insert sequence
          Length = 2390

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 73   gattgaagaatgttttacaga 93
            |||||||||||||||||||||
Sbjct: 2336 gattgaagaatgttttacaga 2356
to top
>ref|NM_022262.3| Rattus norvegicus translin-associated factor X (Tsnax), mRNA
          Length = 2290

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 73   gattgaagaatgttttacaga 93
            |||||||||||||||||||||
Sbjct: 2208 gattgaagaatgttttacaga 2228
to top
>dbj|AK030407.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
            enriched library, clone:5330407L23
            product:translin-associated factor X, full insert
            sequence
          Length = 2324

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 73   gattgaagaatgttttacaga 93
            |||||||||||||||||||||
Sbjct: 2264 gattgaagaatgttttacaga 2284
to top
>gb|AF343876.1|AF343876 Clonorchis sinensis proline-rich antigen mRNA, partial cds
          Length = 826

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 1   ctcgtgccgattcggcacgag 21
to top
>gb|AF302079.1|AF302079 Homo sapiens HSP22-like protein interacting protein 17 mRNA,
           complete cds
          Length = 903

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 8   ctcgtgccgattcggcacgag 28
to top
>gb|AY074433.1| Trichosurus vulpecula clone TrvuVK172 immunoglobulin kappa light
           chain variable region mRNA, partial cds
          Length = 467

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 6   ctcgtgccgattcggcacgag 26
to top
>gb|AY074427.1| Trichosurus vulpecula clone TrvuVK138 immunoglobulin kappa light
           chain variable region mRNA, partial cds
          Length = 467

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 6   ctcgtgccgattcggcacgag 26
to top
>gb|AF187040.1|AF187040 Mus musculus translin associated protein X (Trax) mRNA, complete cds
          Length = 2410

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 73   gattgaagaatgttttacaga 93
            |||||||||||||||||||||
Sbjct: 2334 gattgaagaatgttttacaga 2354
to top
>dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GTP binding protein,
           complete cds
          Length = 946

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 1   ctcgtgccgattcggcacgag 21
to top
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 445    catttctatgtcattctctccatctccaa 473
              ||||||||| ||||| |||||||||||||
Sbjct: 651585 catttctatatcattttctccatctccaa 651557
to top
>gb|AF177671.1|AF177671 Rattus norvegicus ATX1 homolog protein Rah1p (rah1) mRNA, complete
           cds
          Length = 503

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 21  ctcgtgccgattcggcacgag 1
to top
>gb|AF130979.1|AF130979 Homo sapiens SH3 domain-containing protein 6511 mRNA, complete cds
          Length = 1907

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 35  ctcgtgccgattcggcacgag 15
to top
>gb|AY109271.1| Zea mays PCO074636 mRNA sequence
          Length = 503

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 26  ctcgtgccgattcggcacgag 46
to top
>gb|AY106084.1| Zea mays PCO072275 mRNA sequence
          Length = 1307

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 8   ctcgtgccgattcggcacgag 28
to top
>gb|AF026844.1|AF026844 Homo sapiens ribosomal protein L41 mRNA, complete cds
          Length = 444

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 21  ctcgtgccgattcggcacgag 1
to top
>gb|U71195.1|GMU71195 Glycine max napin-type 2S albumin 3 mRNA, complete cds
          Length = 777

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 24  ctcgtgccgattcggcacgag 4
to top
>dbj|AB080019.1| Xenopus laevis mRNA for galectin family xgalectin-VIa, complete cds
          Length = 1427

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 30  ctcgtgccgattcggcacgag 10
to top
>gb|AF074334.1|AF074334 Drosophila melanogaster cyclin H homolog (CycH) mRNA, complete cds
          Length = 1244

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 7   ctcgtgccgattcggcacgag 27
to top
>ref|NM_016909.1| Mus musculus translin-associated factor X (Tsnax), mRNA
          Length = 2410

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 73   gattgaagaatgttttacaga 93
            |||||||||||||||||||||
Sbjct: 2334 gattgaagaatgttttacaga 2354
to top
>gb|U57682.1|RCU57682 Rhodobacter capsulatus cosmids 143-147, complete sequence
          Length = 86896

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 389   gctttggtcttctcagcgccg 409
             |||||||||||||||||||||
Sbjct: 55595 gctttggtcttctcagcgccg 55575
to top
>dbj|AB018544.1| Hydra magnipapillata mRNA for Hym-176 preprohormone, complete cds
          Length = 620

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 ctcgtgccgattcggcacgag 528
           |||||||||||||||||||||
Sbjct: 6   ctcgtgccgattcggcacgag 26
to top
>gb|BC099839.1| Mus musculus seizure related 6 homolog like, mRNA (cDNA clone
            IMAGE:30618098), partial cds
          Length = 2917

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 504  gatcctcgtgccga-ttcggcacgaggc 530
            |||||||||||||| |||||||||||||
Sbjct: 1401 gatcctcgtgccgaattcggcacgaggc 1428
to top
>gb|BT016288.1| Zea mays clone Contig121 mRNA sequence
          Length = 1032

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 507 cctcgtgccgattcggcacgaggc 530
           |||||||| |||||||||||||||
Sbjct: 202 cctcgtgctgattcggcacgaggc 179
to top
>gb|AE017263.1| Mesoplasma florum L1 complete genome
          Length = 793224

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 450    ctatgtcattctctccatctccaa 473
              |||||||||||||||| |||||||
Sbjct: 604712 ctatgtcattctctccgtctccaa 604735
to top
>gb|AC120873.7| Mus musculus chromosome 12, clone RP23-283P14, complete sequence
          Length = 198375

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 235    atgtttgaacaaaacttgttattt 258
              ||||||||||||||| ||||||||
Sbjct: 133331 atgtttgaacaaaacctgttattt 133308
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>gb|BC071903.1| Homo sapiens cDNA clone IMAGE:6597035, containing frame-shift
           errors
          Length = 2427

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                       
Query: 504 gatcctcgtgccga-ttcggcacgaggc 530
           |||||||||||||| |||||||||||||
Sbjct: 539 gatcctcgtgccgaattcggcacgaggc 566
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>gb|AF499716.1| Thellungiella halophila ethylene responsive element binding factor
           4-like protein mRNA, complete cds
          Length = 771

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                       
Query: 503 agatcctcgtgccg-attcggcacgagg 529
           |||||||||||||| |||||||||||||
Sbjct: 28  agatcctcgtgccgaattcggcacgagg 1
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>gb|DP000038.2| Colobus guereza target 106 genomic scaffold
          Length = 481828

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   ccatctccaattgccattac 483
             ||||||||||||||||||||
Sbjct: 15463 ccatctccaattgccattac 15444
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>gb|BC021057.1| Homo sapiens cDNA clone IMAGE:2959663, **** WARNING: chimeric clone
            ****
          Length = 2565

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 503  agatcctcgtgccg-attcggcacgagg 529
            |||||||||||||| |||||||||||||
Sbjct: 1700 agatcctcgtgccgaattcggcacgagg 1673
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>ref|XM_787573.1| PREDICTED: Strongylocentrotus purpuratus similar to tripartite
           motif-containing 45 (LOC587863), mRNA
          Length = 555

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 gtgactgtgaccacaaccct 216
           ||||||||||||||||||||
Sbjct: 300 gtgactgtgaccacaaccct 281
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>gb|AC174609.3| Cavia porcellus clone CH234-34N9, complete sequence
          Length = 136141

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   tgttatttggcaacaacact 270
             ||||||||||||||||||||
Sbjct: 95526 tgttatttggcaacaacact 95507
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>emb|AL163532.8| Human DNA sequence from clone RP11-226D23 on chromosome 13, complete
             sequence
          Length = 20988

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    atattcccagtggaaaaaag 112
             ||||||||||||||||||||
Sbjct: 18741 atattcccagtggaaaaaag 18722
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>emb|AL137851.12| Human DNA sequence from clone RP11-6H18 on chromosome 9p23-24.3
             Contains a novel gene and part of a variant of the PTPRD
             gene for protein tyrosine phosphatase, receptor type, D
             (HPTP, PTPD, HPTPD), complete sequence
          Length = 139182

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    aacaaggggtacaaagtagc 37
             ||||||||||||||||||||
Sbjct: 50703 aacaaggggtacaaagtagc 50684
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>dbj|AB230081.1| Aspergillus oryzae cDNA, contig sequence: AoEST6968
          Length = 262

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                       
Query: 503 agatcctcgtgccg-attcggcacgagg 529
           |||||||||||||| |||||||||||||
Sbjct: 28  agatcctcgtgccgaattcggcacgagg 1
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>dbj|AB242299.1| Asterias amurensis PKA-R mRNA for protein kinase A regulatory
            subunit, complete cds
          Length = 2300

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 503  agatcctcgtgccg-attcggcacgagg 529
            |||||||||||||| |||||||||||||
Sbjct: 1334 agatcctcgtgccgaattcggcacgagg 1307
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>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete
             sequence
          Length = 120938

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    agattgaagaatgttttaca 91
             ||||||||||||||||||||
Sbjct: 47150 agattgaagaatgttttaca 47169
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>gb|AC008199.4|AC008199 Drosophila melanogaster, chromosome 3R, region 94D-94D, BAC clone
             BACR01K08, complete sequence
          Length = 177127

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   tccaccgattgccaaccaaccaaa 147
             |||||||||| |||||||||||||
Sbjct: 70289 tccaccgattcccaaccaaccaaa 70266
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>gb|AC016970.16| Homo sapiens 3 BAC RP11-40M23 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 166966

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   agaatgttttacagatattc 98
            ||||||||||||||||||||
Sbjct: 5909 agaatgttttacagatattc 5928
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>emb|AJ302017.1|PAB302017 Picea abies mRNA for putative plastidial w-3 fatty acid desaturase
           (fad3 gene)
          Length = 2248

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 508 ctcgtgccgattcggcacga 527
           ||||||||||||||||||||
Sbjct: 81  ctcgtgccgattcggcacga 62
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>emb|AL513422.2|HS527D15 Homo sapiens chromosome 9 BAC RP11-527D15, complete sequence
          Length = 166169

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     aacaaggggtacaaagtagc 37
              ||||||||||||||||||||
Sbjct: 116082 aacaaggggtacaaagtagc 116063
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>gb|BC030047.1| Mus musculus cDNA clone IMAGE:1179272, with apparent retained
           intron
          Length = 994

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                       
Query: 504 gatcctcgtgccga-ttcggcacgaggc 530
           |||||||||||||| |||||||||||||
Sbjct: 806 gatcctcgtgccgaattcggcacgaggc 833
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>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome
          Length = 996422

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     agagattgaagaatgtttta 89
              ||||||||||||||||||||
Sbjct: 158683 agagattgaagaatgtttta 158702
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>gb|AE003741.2| Drosophila melanogaster chromosome 3R, section 79 of 118 of the
             complete sequence
          Length = 233356

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   tccaccgattgccaaccaaccaaa 147
             |||||||||| |||||||||||||
Sbjct: 98187 tccaccgattcccaaccaaccaaa 98164
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>gb|AC124387.5| Mus musculus BAC clone RP24-426N3 from chromosome 13, complete sequence
          Length = 159689

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    acagagagcatcccttggtt 66
             ||||||||||||||||||||
Sbjct: 68213 acagagagcatcccttggtt 68232
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>gb|AC163693.3| Mus musculus BAC clone RP24-70O15 from chromosome 13, complete sequence
          Length = 219890

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    acagagagcatcccttggtt 66
             ||||||||||||||||||||
Sbjct: 10843 acagagagcatcccttggtt 10824
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>gb|AC130716.3| Mus musculus BAC clone RP23-463B12 from 3, complete sequence
          Length = 172517

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    attgaagaatgttttacaga 93
             ||||||||||||||||||||
Sbjct: 53107 attgaagaatgttttacaga 53088
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>emb|CR974487.10| Mouse DNA sequence from clone RP23-136M7 on chromosome 12, complete
              sequence
          Length = 218303

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 235    atgtttgaacaaaacttgttattt 258
              ||||||||||||||| ||||||||
Sbjct: 108945 atgtttgaacaaaacctgttattt 108968
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>emb|AL840635.6| Mouse DNA sequence from clone RP23-418D21 on chromosome 2, complete
             sequence
          Length = 201328

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   gccaaccaaccaaaaaatgg 153
             ||||||||||||||||||||
Sbjct: 48471 gccaaccaaccaaaaaatgg 48490
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 367    ggcgccgatcacgttcgccactgc 390
              |||||||||||| |||||||||||
Sbjct: 181595 ggcgccgatcacattcgccactgc 181572


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,147,992
Number of Sequences: 3902068
Number of extensions: 5147992
Number of successful extensions: 108629
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 108372
Number of HSP's gapped (non-prelim): 261
length of query: 530
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 507
effective length of database: 17,143,297,704
effective search space: 8691651935928
effective search space used: 8691651935928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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