| Clone Name | rbags20c09 |
|---|---|
| Clone Library Name | barley_pub |
>MYB4_ORYSA (Q7XBH4) Myb-related protein Myb4 (OsMyb4) (Transcription factor| RLTR1) Length = 257 Score = 77.8 bits (190), Expect = 1e-14 Identities = 54/162 (33%), Positives = 69/162 (42%), Gaps = 20/162 (12%) Frame = -2 Query: 445 NEIKNVWHTHLKKRLQXXXXXXXXXXXXXXXXXXXXXXXXXADGSASVPVSPEQPIXXXX 266 NEIKNVWHTHLKKRL A +A+ P SPE+ Sbjct: 102 NEIKNVWHTHLKKRLDAPAQGGHVAASGGKKHKKPKSAKKPAAAAAAPPASPERSASSSV 161 Query: 265 XXXXXXXSL------------------ENTDSFTS--EEFXIEDSFWSXTLAMTVDNSGS 146 S+ + SFTS EEF I+DSFWS TL+M +D Sbjct: 162 TESSMASSVAEEHGNAGISSASASVCAKEESSFTSASEEFQIDDSFWSETLSMPLDGYDV 221 Query: 145 PMXAGVTLGAQXSASPSSSNDEVDFWVRLFMQAGEVQSLSHI 20 M G A SA D++D+W+ +FM++GE Q L I Sbjct: 222 SMEPGDAFVAPPSA------DDMDYWLGVFMESGEAQDLPQI 257
>MYB1_PHYPA (P80074) Myb-related protein Pp1 (Fragment)| Length = 449 Score = 32.7 bits (73), Expect = 0.42 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = -2 Query: 445 NEIKNVWHTHLKKRL 401 NEIKN W+THLKKRL Sbjct: 16 NEIKNYWNTHLKKRL 30
>MYB1_MAIZE (P20024) Myb-related protein Zm1| Length = 340 Score = 32.3 bits (72), Expect = 0.55 Identities = 12/15 (80%), Positives = 15/15 (100%) Frame = -2 Query: 445 NEIKNVWHTHLKKRL 401 NEIKNVW+THLKK++ Sbjct: 104 NEIKNVWNTHLKKKV 118
>LAF1_ARATH (Q9M0K4) Transcription factor LAF1 (Long after far-red light| protein 1) (Myb-related protein 18) (AtMYB18) Length = 283 Score = 31.2 bits (69), Expect = 1.2 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -2 Query: 445 NEIKNVWHTHLKKR 404 NEIKN WH+HLKK+ Sbjct: 100 NEIKNYWHSHLKKK 113
>ODO1_PETHY (Q50EX6) ODORANT1 protein (MYB-like protein ODO1)| Length = 294 Score = 30.0 bits (66), Expect = 2.7 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = -2 Query: 445 NEIKNVWHTHLKKRL 401 NEIKN W+TH+KK+L Sbjct: 102 NEIKNHWNTHIKKKL 116
>MYB2_PHYPA (P80073) Myb-related protein Pp2| Length = 421 Score = 30.0 bits (66), Expect = 2.7 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -2 Query: 445 NEIKNVWHTHLKKRLQ 398 NEIKN W+T LKKRL+ Sbjct: 102 NEIKNYWNTRLKKRLR 117
>MYBA1_ORYSA (Q53NK6) Myb-related protein MYBAS1| Length = 237 Score = 29.3 bits (64), Expect = 4.6 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -2 Query: 445 NEIKNVWHTHLKKRLQ 398 NEIKN W TH++K+ Q Sbjct: 98 NEIKNYWRTHMRKKAQ 113
>MYBA2_ORYSA (Q4JL76) Myb-related protein MYBAS2| Length = 242 Score = 29.3 bits (64), Expect = 4.6 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -2 Query: 445 NEIKNVWHTHLKKRLQ 398 NEIKN W TH++K+ Q Sbjct: 98 NEIKNYWRTHMRKKAQ 113
>MYB59_ARATH (Q4JL84) Transcription factor MYB59 (Myb-related protein 59)| (AtMYB59) Length = 235 Score = 29.3 bits (64), Expect = 4.6 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -2 Query: 445 NEIKNVWHTHLKKRLQ 398 NEIKN W TH++K+ Q Sbjct: 98 NEIKNYWRTHMRKKAQ 113
>MYB48_ARATH (Q9LX82) Transcription factor MYB48 (Myb-related protein 48)| (AtMYB48) Length = 256 Score = 29.3 bits (64), Expect = 4.6 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -2 Query: 445 NEIKNVWHTHLKKRLQ 398 NEIKN W TH++K+ Q Sbjct: 97 NEIKNYWRTHMRKKAQ 112
>RT05_CAEEL (Q93425) Putative mitochondrial 40S ribosomal protein S5| Length = 418 Score = 28.9 bits (63), Expect = 6.0 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +2 Query: 14 CLNVRQTLHLASLHEQSDPEVHLVVAGRGRCTXLGAQGDAGVHRGTGVV 160 CL V++T ++ ++ + LVV G GR A G A +HR T + Sbjct: 138 CLEVKRTSNMTNVFGRVHTMSALVVTGNGRGLAGYAVGKAPIHRTTTAI 186
>MYB4_ARATH (Q9SZP1) Transcription repressor MYB4 (Myb-related protein 4)| (AtMYB4) Length = 282 Score = 28.5 bits (62), Expect = 7.9 Identities = 9/15 (60%), Positives = 14/15 (93%) Frame = -2 Query: 445 NEIKNVWHTHLKKRL 401 NEIKN W+TH++++L Sbjct: 102 NEIKNYWNTHIRRKL 116
>MYB1_HORVU (P20026) Myb-related protein Hv1| Length = 267 Score = 28.5 bits (62), Expect = 7.9 Identities = 9/15 (60%), Positives = 14/15 (93%) Frame = -2 Query: 445 NEIKNVWHTHLKKRL 401 NEIKN W+TH++++L Sbjct: 102 NEIKNYWNTHIRRKL 116 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,918,415 Number of Sequences: 219361 Number of extensions: 921090 Number of successful extensions: 2549 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2488 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2546 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)