ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 49 1e-05
2APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor... 40 0.006
3RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RL... 40 0.010
4SIRK_ARATH (O64483) Senescence-induced receptor-like serine/thre... 38 0.037
5NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK ... 37 0.063
6CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 pr... 35 0.24
7CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx3... 34 0.41
8IRAK1_MOUSE (Q62406) Interleukin-1 receptor-associated kinase 1 ... 32 2.7
9HM37_CAEEL (Q93356) Homeobox protein ceh-37 30 5.9

>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 26/69 (37%), Positives = 39/69 (56%)
 Frame = -1

Query: 734 DDSLVDWARPLLMRALEDGNYDELVDARLGKDFNPNEIARMIACAAACVRHSARRRPRMS 555
           D  L+DW + LL    ++   + LVD  L  ++   E+ ++I  A  C + S   RP+MS
Sbjct: 502 DVMLLDWVKGLL----KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 557

Query: 554 QVVRALEGD 528
           +VVR LEGD
Sbjct: 558 EVVRMLEGD 566



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>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)|
          Length = 412

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 24/77 (31%), Positives = 39/77 (50%)
 Frame = -1

Query: 734 DDSLVDWARPLLMRALEDGNYDELVDARLGKDFNPNEIARMIACAAACVRHSARRRPRMS 555
           +  LV+WARPLL    +      ++D RL   ++  E  ++   A  C+    + RP M+
Sbjct: 289 EQKLVEWARPLLANKRK---LFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMN 345

Query: 554 QVVRALEGDVSLEDLNE 504
           +VV  LE    ++ LNE
Sbjct: 346 EVVSHLE---HIQTLNE 359



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>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC|
           2.7.11.1)
          Length = 423

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 23/66 (34%), Positives = 35/66 (53%)
 Frame = -1

Query: 734 DDSLVDWARPLLMRALEDGNYDELVDARLGKDFNPNEIARMIACAAACVRHSARRRPRMS 555
           D +LV WARPL     +  N+ ++VD  L   +    + + +A +A CV+     RP +S
Sbjct: 315 DQNLVGWARPLFK---DRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVS 371

Query: 554 QVVRAL 537
            VV AL
Sbjct: 372 DVVLAL 377



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>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein|
           kinase precursor (FLG22-induced receptor-like kinase 1)
          Length = 876

 Score = 37.7 bits (86), Expect = 0.037
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = -1

Query: 689 LEDGNYDELVDARLGKDFNPNEIARMIACAAACVRHSARRRPRMSQVVRALE 534
           L +G+   +VD RL + ++     +M   A AC  H++ +RP MSQVV  L+
Sbjct: 792 LANGDIRGIVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELK 843



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>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)|
          Length = 389

 Score = 37.0 bits (84), Expect = 0.063
 Identities = 19/67 (28%), Positives = 34/67 (50%)
 Frame = -1

Query: 734 DDSLVDWARPLLMRALEDGNYDELVDARLGKDFNPNEIARMIACAAACVRHSARRRPRMS 555
           + +LVDWARP L           ++D RL   ++     ++   A  C+   A+ RP M+
Sbjct: 288 EHNLVDWARPYL---TNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMN 344

Query: 554 QVVRALE 534
           ++V+ +E
Sbjct: 345 EIVKTME 351



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>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC|
           2.7.11.1)
          Length = 901

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 20/72 (27%), Positives = 38/72 (52%)
 Frame = -1

Query: 734 DDSLVDWARPLLMRALEDGNYDELVDARLGKDFNPNEIARMIACAAACVRHSARRRPRMS 555
           + ++V+WA PL+    + G+   ++D  L    +   + ++ + A  CVR   + RP M 
Sbjct: 717 EGNIVEWAVPLI----KAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMD 772

Query: 554 QVVRALEGDVSL 519
           +V  ALE  ++L
Sbjct: 773 KVTTALEHALAL 784



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>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast|
           precursor (EC 2.7.11.1)
          Length = 419

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 18/66 (27%), Positives = 28/66 (42%)
 Frame = -1

Query: 731 DSLVDWARPLLMRALEDGNYDELVDARLGKDFNPNEIARMIACAAACVRHSARRRPRMSQ 552
           +SLVDW RP L          +++D  +   +       M     +C+    + RP M +
Sbjct: 304 ESLVDWLRPELSNK---HRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKE 360

Query: 551 VVRALE 534
           VV  LE
Sbjct: 361 VVEVLE 366



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>IRAK1_MOUSE (Q62406) Interleukin-1 receptor-associated kinase 1 (EC 2.7.11.1)|
           (IRAK-1) (IRAK) (Pelle-like protein kinase) (mPLK)
          Length = 710

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -1

Query: 716 WARPLLMRALEDGNYDELVDARLGKDFNPNEIARMIACAAACVRHS-ARRRPRMSQVVRA 540
           WA P+  +      Y + +D+R G    P ++   +A  A C  H  A++RP M+QV + 
Sbjct: 465 WAAPIAAQI-----YKKHLDSRPGPC--PPQLGLALAQLACCCMHRRAKKRPPMTQVYKR 517

Query: 539 LEG 531
           LEG
Sbjct: 518 LEG 520



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>HM37_CAEEL (Q93356) Homeobox protein ceh-37|
          Length = 278

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
 Frame = -1

Query: 569 RPRMSQVVRALEGDVSLEDLN--EGVRPGHSRXXXXXXXXXXXXGQYNEDMKKFKKMAFT 396
           +P++   + + +G V+   L   + + P  +              Q+N D    K + F 
Sbjct: 138 QPQIKSELESCDGAVASGKLGTPKSISPVETTASTTSSNTSAAELQWNGD---HKILGFG 194

Query: 395 TNDYTSSQYSAPTSEYGQIPSASSS 321
            N+ T+S   +PT++    PS+SSS
Sbjct: 195 KNETTTSAAVSPTADNASTPSSSSS 219


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,835,490
Number of Sequences: 219361
Number of extensions: 1789374
Number of successful extensions: 4825
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4811
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7649585595
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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