ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY224526.1| Oryza sativa (japonica cultivar-group) isolate 20... 504 e-139
2gb|AY108241.1| Zea mays PCO134818 mRNA sequence 468 e-128
3gb|BT016904.1| Zea mays clone Contig737 mRNA sequence 444 e-121
4gb|AC137001.2| Oryza sativa (japonica cultivar-group) chromosome... 323 5e-85
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 323 5e-85
6gb|AY108243.1| Zea mays PCO134814 mRNA sequence 315 1e-82
7ref|NM_188575.1| Oryza sativa (japonica cultivar-group), predic... 149 2e-32
8dbj|AK103247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 2e-32
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
10dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
11dbj|AB110953.1| Nicotiana tabacum NtPERK1 mRNA for PERK1-like pr... 48 0.041
12ref|NM_113366.2| Arabidopsis thaliana ATP binding / protein kina... 42 2.5
13ref|NM_113365.1| Arabidopsis thaliana ATP binding / kinase/ prot... 42 2.5
14gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 2.5
15gb|BC075486.1| Xenopus tropicalis MGC89323 protein, mRNA (cDNA c... 42 2.5
16gb|AY536856.1| Arabidopsis thaliana putative protein kinase (At3... 42 2.5
17gb|AC118755.7| Homo sapiens chromosome 17, clone RP11-55L4, comp... 42 2.5
18gb|AC021218.9| Homo sapiens BAC clone RP11-525O1 from 7, complet... 42 2.5
19gb|DQ446692.1| Arabidopsis thaliana clone pENTR221-At3g24540 pro... 42 2.5
20gb|BT008409.1| Arabidopsis thaliana At3g24600 gene, complete cds 42 2.5
21gb|BT008400.1| Arabidopsis thaliana At3g24550 gene, complete cds 42 2.5
22gb|AY128792.1| Arabidopsis thaliana protein kinase-like protein ... 42 2.5
23gb|AY093065.1| Arabidopsis thaliana unknown protein (At3g24550) ... 42 2.5
24ref|XM_689578.1| PREDICTED: Danio rerio similar to regulatory fa... 42 2.5
25gb|AY059901.1| Arabidopsis thaliana protein kinase-like protein ... 42 2.5
26gb|AY056788.1| Arabidopsis thaliana AT3g24550/MOB24_8 mRNA, comp... 42 2.5
27gb|AF370509.1|AF370509 Arabidopsis thaliana protein kinase-like ... 42 2.5
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
29gb|AY028699.1| Brassica napus receptor protein kinase PERK1 mRNA... 42 2.5
30emb|BX823746.1|CNS0A4QX Arabidopsis thaliana Full-length cDNA Co... 42 2.5
31ref|NM_001004970.1| Xenopus tropicalis MGC89323 protein (MGC8932... 42 2.5
32gb|AY089024.1| Arabidopsis thaliana clone 17909 mRNA, complete s... 42 2.5
33gb|AC087501.16| Homo sapiens chromosome 17, clone RP11-565F19, c... 42 2.5
34dbj|AK099395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.5
35dbj|AK061613.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.5
36gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
37emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118... 42 2.5

>gb|AY224526.1| Oryza sativa (japonica cultivar-group) isolate 20960 putative
            receptor protein kinase mRNA, partial cds
          Length = 1185

 Score =  504 bits (254), Expect = e-139
 Identities = 434/494 (87%)
 Strand = Plus / Minus

                                                                        
Query: 241  ccgctgtatcctgaactgtagccactgtggccacctttcttcattgtccccgtctcgatt 300
            |||||||||||||| ||||||||||||| ||| ||| ||||  ||||||   |||||| |
Sbjct: 1175 ccgctgtatcctgagctgtagccactgtagccgcctctcttggttgtcctgctctcgact 1116

                                                                        
Query: 301  tcttgagtttgctggccctcgctgcttgatgcagatggtatctgaccatactcgctcgtc 360
            || || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || 
Sbjct: 1115 tcctgggtttgttggccctcgctgcttgatgcagagggtatctggccatactcgctggtt 1056

                                                                        
Query: 361  ggcgcgctgtattggctgctcgtgtagtcattcgtcgtaaaggccatcttcttgaacttc 420
            || ||||||||||| |||||||| |  | |||  | ||||| ||||||||| ||||||||
Sbjct: 1055 ggtgcgctgtattgactgctcgtatcattattgttggtaaaagccatcttcctgaacttc 996

                                                                        
Query: 421  ttcatgtcctcgttgtactgcccagaatcatagtcggaactgctgtatgatccaaaaaag 480
            ||||||||||||||||| || |||||||||||||| || |||||||| ||||||||| ||
Sbjct: 995  ttcatgtcctcgttgtattggccagaatcatagtcagagctgctgtacgatccaaaatag 936

                                                                        
Query: 481  cggctatgaccaggccgaacaccttcattaagatcctccaaagacacgtcaccttctaag 540
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 935  cggctgtgaccaggccgaacaccttcattaagatcctccaaagacacgtcaccttccaaa 876

                                                                        
Query: 541  gcccgaacaacctgactcattcgagggcgacgacgggctgaatggcgtacacatgcagca 600
            ||||| |||||||| ||||| || ||||||||||| || ||||||||||| |||||||| 
Sbjct: 875  gcccggacaacctggctcatgcgtgggcgacgacgagcggaatggcgtacgcatgcagct 816

                                                                        
Query: 601  gcacatgctatcattctggcaatctcattaggattgaaatccttccccagacgagcatcc 660
            ||||| || |||||||| || |||||||| ||||||||||||||||| || |||| ||| 
Sbjct: 815  gcacaagcaatcattctcgccatctcattgggattgaaatccttcccaagccgaggatct 756

                                                                        
Query: 661  actagctcatcatagttaccatcctcaagtgctcgcatcagtaaaggtcttgcccagtca 720
            |||| ||| || |||||||||| |||||||||| ||||||||||||| ||||||||||||
Sbjct: 755  actaactcctcgtagttaccattctcaagtgcttgcatcagtaaaggccttgcccagtca 696

                          
Query: 721  accaagctgtcatc 734
            ||||||||||||||
Sbjct: 695  accaagctgtcatc 682



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>gb|AY108241.1| Zea mays PCO134818 mRNA sequence
          Length = 1053

 Score =  468 bits (236), Expect = e-128
 Identities = 434/497 (87%), Gaps = 6/497 (1%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgctgtatcctgaactgtagccac---tgtggccacctttcttcattgtccccgtctcg 297
           |||||||||||||| ||||||||||   ||| |||||||||||||||||  |||| ||| 
Sbjct: 848 ccgctgtatcctgagctgtagccaccactgtagccacctttcttcattgcacccgactcc 789

                                                                       
Query: 298 atttcttgagtttgctggccctcgctgcttgatgcagatggtatctgaccatactcgctc 357
           || ||||| || || ||||||||||||||||||||||| |||||||| ||||| || || 
Sbjct: 788 atctcttgcgtctggtggccctcgctgcttgatgcagacggtatctgtccatattcactg 729

                                                                       
Query: 358 gtcggcgcgctgtattggctgctcgtgtagtcattcgtcgtaaaggccatcttcttgaac 417
           || |||||||||||||||||||| || ||||  || || |  || |||||||||||||||
Sbjct: 728 gttggcgcgctgtattggctgctggtatagttgtt-gttg--aatgccatcttcttgaac 672

                                                                       
Query: 418 ttcttcatgtcctcgttgtactgcccagaatcatagtcggaactgctgtatgatccaaaa 477
           ||||||||||||||||||||||| |||||||| || ||||| ||||||||||| ||||| 
Sbjct: 671 ttcttcatgtcctcgttgtactggccagaatcgtaatcggagctgctgtatgacccaaag 612

                                                                       
Query: 478 aagcggctatgaccaggccgaacaccttcattaagatcctccaaagacacgtcaccttct 537
           ||||||||||| ||||||||||||||||||||||| |||||||||||||| |  || || 
Sbjct: 611 aagcggctatggccaggccgaacaccttcattaaggtcctccaaagacacattgccctcc 552

                                                                       
Query: 538 aaggcccgaacaacctgactcattcgagggcgacgacgggctgaatggcgtacacatgca 597
           || |||||||| ||||||||||| || || |||||||| || ||||||||||||||||||
Sbjct: 551 aaagcccgaacgacctgactcatacgtggccgacgacgtgcagaatggcgtacacatgca 492

                                                                       
Query: 598 gcagcacatgctatcattctggcaatctcattaggattgaaatccttccccagacgagca 657
           || ||||| ||||||||||| || ||||||||||||||||| ||||| ||||| |||| |
Sbjct: 491 gctgcacaggctatcattcttgccatctcattaggattgaagtcctttcccagccgagga 432

                                                                       
Query: 658 tccactagctcatcatagttaccatcctcaagtgctcgcatcagtaaaggtcttgcccag 717
           |||||||   ||||||| | ||||||||||||||||||||||||||| || |||||||||
Sbjct: 431 tccactaaagcatcatattcaccatcctcaagtgctcgcatcagtaatggccttgcccag 372

                            
Query: 718 tcaaccaagctgtcatc 734
           |||||||||||||||||
Sbjct: 371 tcaaccaagctgtcatc 355



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>gb|BT016904.1| Zea mays clone Contig737 mRNA sequence
          Length = 1195

 Score =  444 bits (224), Expect = e-121
 Identities = 431/497 (86%), Gaps = 6/497 (1%)
 Strand = Plus / Plus

                                                                       
Query: 241 ccgctgtatcctgaactgtagccac---tgtggccacctttcttcattgtccccgtctcg 297
           |||||||||||||| ||||||||||   ||| |||||||||||||||||  |||| ||| 
Sbjct: 254 ccgctgtatcctgagctgtagccaccactgtagccacctttcttcattgcacccgactcc 313

                                                                       
Query: 298 atttcttgagtttgctggccctcgctgcttgatgcagatggtatctgaccatactcgctc 357
           || ||||| || ||  |||||||||||||||||||||| |||||||| ||||| || || 
Sbjct: 314 atctcttgcgtctgggggccctcgctgcttgatgcagacggtatctgtccatattcactg 373

                                                                       
Query: 358 gtcggcgcgctgtattggctgctcgtgtagtcattcgtcgtaaaggccatcttcttgaac 417
           || |||||||||||||||||||| || ||||  || || |  || |||||||||||||||
Sbjct: 374 gttggcgcgctgtattggctgctggtatagttgtt-gttg--aatgccatcttcttgaac 430

                                                                       
Query: 418 ttcttcatgtcctcgttgtactgcccagaatcatagtcggaactgctgtatgatccaaaa 477
           ||||||||||||||||||||||| |||||||| || ||||| ||||||||||| ||||| 
Sbjct: 431 ttcttcatgtcctcgttgtactggccagaatcgtaatcggagctgctgtatgacccaaag 490

                                                                       
Query: 478 aagcggctatgaccaggccgaacaccttcattaagatcctccaaagacacgtcaccttct 537
           ||||||||||| |||||||||||||||||||||||  ||||||||||||| |  || || 
Sbjct: 491 aagcggctatggccaggccgaacaccttcattaagggcctccaaagacacattgccctcc 550

                                                                       
Query: 538 aaggcccgaacaacctgactcattcgagggcgacgacgggctgaatggcgtacacatgca 597
           || |||||||| ||||||||||| || || |||||||| || ||||||||||||||||||
Sbjct: 551 aaagcccgaacgacctgactcatacgtggccgacgacgtgcagaatggcgtacacatgca 610

                                                                       
Query: 598 gcagcacatgctatcattctggcaatctcattaggattgaaatccttccccagacgagca 657
           || ||||| ||||||||||| || ||||||||||||||||| ||||| ||||| |||| |
Sbjct: 611 gctgcacaggctatcattcttgccatctcattaggattgaagtcctttcccagccgagga 670

                                                                       
Query: 658 tccactagctcatcatagttaccatcctcaagtgctcgcatcagtaaaggtcttgcccag 717
           |||||||    |||||| | ||||||||||||||||||||||||||| || |||||||||
Sbjct: 671 tccactaaagaatcatattcaccatcctcaagtgctcgcatcagtaatggccttgcccag 730

                            
Query: 718 tcaaccaagctgtcatc 734
           |||||||||||||||||
Sbjct: 731 tcaaccaagctgtcatc 747



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>gb|AC137001.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0012L23, complete sequence
          Length = 121659

 Score =  323 bits (163), Expect = 5e-85
 Identities = 277/315 (87%)
 Strand = Plus / Plus

                                                                         
Query: 241   ccgctgtatcctgaactgtagccactgtggccacctttcttcattgtccccgtctcgatt 300
             |||||||||||||| ||||||||||||| ||| ||| ||||  ||||||   |||||| |
Sbjct: 54723 ccgctgtatcctgagctgtagccactgtagccgcctctcttggttgtcctgctctcgact 54782

                                                                         
Query: 301   tcttgagtttgctggccctcgctgcttgatgcagatggtatctgaccatactcgctcgtc 360
             || || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || 
Sbjct: 54783 tcctgggtttgttggccctcgctgcttgatgcagagggtatctggccatactcgctggtt 54842

                                                                         
Query: 361   ggcgcgctgtattggctgctcgtgtagtcattcgtcgtaaaggccatcttcttgaacttc 420
             || ||||||||||| |||||||| |  | |||  | ||||| ||||||||| ||||||||
Sbjct: 54843 ggtgcgctgtattgactgctcgtatcattattgttggtaaaagccatcttcctgaacttc 54902

                                                                         
Query: 421   ttcatgtcctcgttgtactgcccagaatcatagtcggaactgctgtatgatccaaaaaag 480
             ||||||||||||||||| || |||||||||||||| || |||||||| ||||||||| ||
Sbjct: 54903 ttcatgtcctcgttgtattggccagaatcatagtcagagctgctgtacgatccaaaatag 54962

                                                                         
Query: 481   cggctatgaccaggccgaacaccttcattaagatcctccaaagacacgtcaccttctaag 540
             ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 54963 cggctgtgaccaggccgaacaccttcattaagatcctccaaagacacgtcaccttccaaa 55022

                            
Query: 541   gcccgaacaacctga 555
             ||||| |||||||||
Sbjct: 55023 gcccggacaacctga 55037



 Score =  153 bits (77), Expect = 1e-33
 Identities = 143/165 (86%)
 Strand = Plus / Plus

                                                                         
Query: 550   acctgactcattcgagggcgacgacgggctgaatggcgtacacatgcagcagcacatgct 609
             ||||| ||||| || ||||||||||| || ||||||||||| |||||||| ||||| || 
Sbjct: 55219 acctggctcatgcgtgggcgacgacgagcggaatggcgtacgcatgcagctgcacaagca 55278

                                                                         
Query: 610   atcattctggcaatctcattaggattgaaatccttccccagacgagcatccactagctca 669
             |||||||| || |||||||| ||||||||||||||||| || |||| ||| |||| ||| 
Sbjct: 55279 atcattctcgccatctcattgggattgaaatccttcccaagccgaggatctactaactcc 55338

                                                          
Query: 670   tcatagttaccatcctcaagtgctcgcatcagtaaaggtcttgcc 714
             || |||||||||| |||||||||| ||||||||||||| ||||||
Sbjct: 55339 tcgtagttaccattctcaagtgcttgcatcagtaaaggccttgcc 55383



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 103   tatgaaagaatcaacaactgcagctaccagaagctatacttc 144
             ||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 54552 tatgaaagaatcaacaattgtagctaccaaaagctatacttc 54593



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 713   cccagtcaaccaagctgtcatc 734
             ||||||||||||||||||||||
Sbjct: 55819 cccagtcaaccaagctgtcatc 55840



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  323 bits (163), Expect = 5e-85
 Identities = 277/315 (87%)
 Strand = Plus / Plus

                                                                           
Query: 241     ccgctgtatcctgaactgtagccactgtggccacctttcttcattgtccccgtctcgatt 300
               |||||||||||||| ||||||||||||| ||| ||| ||||  ||||||   |||||| |
Sbjct: 7194709 ccgctgtatcctgagctgtagccactgtagccgcctctcttggttgtcctgctctcgact 7194768

                                                                           
Query: 301     tcttgagtttgctggccctcgctgcttgatgcagatggtatctgaccatactcgctcgtc 360
               || || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || 
Sbjct: 7194769 tcctgggtttgttggccctcgctgcttgatgcagagggtatctggccatactcgctggtt 7194828

                                                                           
Query: 361     ggcgcgctgtattggctgctcgtgtagtcattcgtcgtaaaggccatcttcttgaacttc 420
               || ||||||||||| |||||||| |  | |||  | ||||| ||||||||| ||||||||
Sbjct: 7194829 ggtgcgctgtattgactgctcgtatcattattgttggtaaaagccatcttcctgaacttc 7194888

                                                                           
Query: 421     ttcatgtcctcgttgtactgcccagaatcatagtcggaactgctgtatgatccaaaaaag 480
               ||||||||||||||||| || |||||||||||||| || |||||||| ||||||||| ||
Sbjct: 7194889 ttcatgtcctcgttgtattggccagaatcatagtcagagctgctgtacgatccaaaatag 7194948

                                                                           
Query: 481     cggctatgaccaggccgaacaccttcattaagatcctccaaagacacgtcaccttctaag 540
               ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 7194949 cggctgtgaccaggccgaacaccttcattaagatcctccaaagacacgtcaccttccaaa 7195008

                              
Query: 541     gcccgaacaacctga 555
               ||||| |||||||||
Sbjct: 7195009 gcccggacaacctga 7195023



 Score =  153 bits (77), Expect = 1e-33
 Identities = 143/165 (86%)
 Strand = Plus / Plus

                                                                           
Query: 550     acctgactcattcgagggcgacgacgggctgaatggcgtacacatgcagcagcacatgct 609
               ||||| ||||| || ||||||||||| || ||||||||||| |||||||| ||||| || 
Sbjct: 7195205 acctggctcatgcgtgggcgacgacgagcggaatggcgtacgcatgcagctgcacaagca 7195264

                                                                           
Query: 610     atcattctggcaatctcattaggattgaaatccttccccagacgagcatccactagctca 669
               |||||||| || |||||||| ||||||||||||||||| || |||| ||| |||| ||| 
Sbjct: 7195265 atcattctcgccatctcattgggattgaaatccttcccaagccgaggatctactaactcc 7195324

                                                            
Query: 670     tcatagttaccatcctcaagtgctcgcatcagtaaaggtcttgcc 714
               || |||||||||| |||||||||| ||||||||||||| ||||||
Sbjct: 7195325 tcgtagttaccattctcaagtgcttgcatcagtaaaggccttgcc 7195369



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                         
Query: 103     tatgaaagaatcaacaactgcagctaccagaagctatacttc 144
               ||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 7194538 tatgaaagaatcaacaattgtagctaccaaaagctatacttc 7194579



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 713     cccagtcaaccaagctgtcatc 734
               ||||||||||||||||||||||
Sbjct: 7195805 cccagtcaaccaagctgtcatc 7195826



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>gb|AY108243.1| Zea mays PCO134814 mRNA sequence
          Length = 1016

 Score =  315 bits (159), Expect = 1e-82
 Identities = 413/497 (83%), Gaps = 3/497 (0%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgctgtatcctgaactgtagccactgtggccacctttcttcattgtccccgtctcg--- 297
           ||||||||||| || |||||||| |||| |||||||||||||| ||  |||| |||    
Sbjct: 829 ccgctgtatccggagctgtagccgctgtagccacctttcttcactgcacccgactcctcc 770

                                                                       
Query: 298 atttcttgagtttgctggccctcgctgcttgatgcagatggtatctgaccatactcgctc 357
           || || || || ||  ||||||||||||||||| |||| || | ||| || || || || 
Sbjct: 769 atctcctgcgtctggcggccctcgctgcttgatccagacggcacctggccgtattcactg 710

                                                                       
Query: 358 gtcggcgcgctgtattggctgctcgtgtagtcattcgtcgtaaaggccatcttcttgaac 417
           || |||||||||||||||||||| ||||||   ||  |  | || ||| ||||| |||||
Sbjct: 709 gttggcgcgctgtattggctgctggtgtaggtgttgttattgaacgccgtcttcctgaac 650

                                                                       
Query: 418 ttcttcatgtcctcgttgtactgcccagaatcatagtcggaactgctgtatgatccaaaa 477
           |||| ||||||||||||||||||||| ||||| || || || ||||| ||||| ||||| 
Sbjct: 649 ttctgcatgtcctcgttgtactgcccggaatcgtaatcagagctgctatatgacccaaag 590

                                                                       
Query: 478 aagcggctatgaccaggccgaacaccttcattaagatcctccaaagacacgtcaccttct 537
           ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||| 
Sbjct: 589 aagcggctatggccaggtcgaacaccttcattaaggtcctccaaagacacgtcgccttcc 530

                                                                       
Query: 538 aaggcccgaacaacctgactcattcgagggcgacgacgggctgaatggcgtacacatgca 597
           |  |||||||| |||||||||||||| || |||||||| || ||||||||||| || |||
Sbjct: 529 agagcccgaacgacctgactcattcgtggccgacgacgtgcggaatggcgtacgcacgca 470

                                                                       
Query: 598 gcagcacatgctatcattctggcaatctcattaggattgaaatccttccccagacgagca 657
           || ||||| ||||||||||| || ||||| ||||||||||| ||||| || || |||| |
Sbjct: 469 gccgcacaggctatcattcttgccatctcgttaggattgaagtcctttccgagccgagga 410

                                                                       
Query: 658 tccactagctcatcatagttaccatcctcaagtgctcgcatcagtaaaggtcttgcccag 717
           ||||| |   ||||||| | ||||||||| || |||| ||||||||| || |||||||||
Sbjct: 409 tccaccaaagcatcatattcaccatcctcgagcgctctcatcagtaatggccttgcccag 350

                            
Query: 718 tcaaccaagctgtcatc 734
           |||||||||||||||||
Sbjct: 349 tcaaccaagctgtcatc 333



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>ref|NM_188575.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1794

 Score =  149 bits (75), Expect = 2e-32
 Identities = 222/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 464  tgtatgatccaaaaaagcggctatgaccaggccgaacaccttcattaagatcctccaaag 523
            |||||||||| || || |||||||| ||||| ||||||||||| || ||||| ||||| |
Sbjct: 1561 tgtatgatcccaagaatcggctatggccaggacgaacaccttcgttcagatcatccaatg 1502

                                                                        
Query: 524  acacgtcaccttctaaggcccgaacaacctgactcattcgagggcgacgacgggctgaat 583
            |||| || ||||| ||||||||||||||||| ||||| || ||||| || || || ||||
Sbjct: 1501 acacatcgccttccaaggcccgaacaacctggctcatccgtgggcgtcggcgtgcagaat 1442

                                                                        
Query: 584  ggcgtacacatgcagcagcacatgctatcattctggcaatctcattaggattgaaatcct 643
            |||||||||| ||||| ||||| || ||||| || || ||||| |||  |||| | ||||
Sbjct: 1441 ggcgtacacaagcagctgcacaagcaatcatcctcgccatctcgttaccattgtactcct 1382

                                                                        
Query: 644  tccccagacgagcatccactagctcatcatagttaccatcctcaagtgctcgcatcagta 703
              || || || | ||||||||   ||||||| || ||||| ||   ||||||||||| ||
Sbjct: 1381 gtcctagccgtggatccactaaagcatcataattgccatcatctgatgctcgcatcatta 1322

                                           
Query: 704  aaggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||| |||||||||||||||||
Sbjct: 1321 aaggccttgcccaatcaaccaagctgtcatc 1291



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>dbj|AK103247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123K23, full
            insert sequence
          Length = 2307

 Score =  149 bits (75), Expect = 2e-32
 Identities = 222/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 464  tgtatgatccaaaaaagcggctatgaccaggccgaacaccttcattaagatcctccaaag 523
            |||||||||| || || |||||||| ||||| ||||||||||| || ||||| ||||| |
Sbjct: 1843 tgtatgatcccaagaatcggctatggccaggacgaacaccttcgttcagatcatccaatg 1784

                                                                        
Query: 524  acacgtcaccttctaaggcccgaacaacctgactcattcgagggcgacgacgggctgaat 583
            |||| || ||||| ||||||||||||||||| ||||| || ||||| || || || ||||
Sbjct: 1783 acacatcgccttccaaggcccgaacaacctggctcatccgtgggcgtcggcgtgcagaat 1724

                                                                        
Query: 584  ggcgtacacatgcagcagcacatgctatcattctggcaatctcattaggattgaaatcct 643
            |||||||||| ||||| ||||| || ||||| || || ||||| |||  |||| | ||||
Sbjct: 1723 ggcgtacacaagcagctgcacaagcaatcatcctcgccatctcgttaccattgtactcct 1664

                                                                        
Query: 644  tccccagacgagcatccactagctcatcatagttaccatcctcaagtgctcgcatcagta 703
              || || || | ||||||||   ||||||| || ||||| ||   ||||||||||| ||
Sbjct: 1663 gtcctagccgtggatccactaaagcatcataattgccatcatctgatgctcgcatcatta 1604

                                           
Query: 704  aaggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||| |||||||||||||||||
Sbjct: 1603 aaggccttgcccaatcaaccaagctgtcatc 1573



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                           
Query: 464     tgtatgatccaaaaaagcggctatgaccaggccgaacaccttcattaagatcctccaaag 523
               |||||||||| || || |||||||| ||||| ||||||||||| || ||||| ||||| |
Sbjct: 7041461 tgtatgatcccaagaatcggctatggccaggacgaacaccttcgttcagatcatccaatg 7041402

                                              
Query: 524     acacgtcaccttctaaggcccgaacaacctg 554
               |||| || ||||| |||||||||||||||||
Sbjct: 7041401 acacatcgccttccaaggcccgaacaacctg 7041371



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 550     acctgactcattcgagggcgacgacgggctgaatggcgtacacatgcagcagcacatgct 609
               ||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||| || 
Sbjct: 7041136 acctggctcatccgtgggcgtcggcgtgcagaatggcgtacacaagcagctgcacaagca 7041077

                    
Query: 610     atcat 614
               |||||
Sbjct: 7041076 atcat 7041072



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>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0452F10
          Length = 145120

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                         
Query: 464   tgtatgatccaaaaaagcggctatgaccaggccgaacaccttcattaagatcctccaaag 523
             |||||||||| || || |||||||| ||||| ||||||||||| || ||||| ||||| |
Sbjct: 29041 tgtatgatcccaagaatcggctatggccaggacgaacaccttcgttcagatcatccaatg 28982

                                            
Query: 524   acacgtcaccttctaaggcccgaacaacctg 554
             |||| || ||||| |||||||||||||||||
Sbjct: 28981 acacatcgccttccaaggcccgaacaacctg 28951



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 550   acctgactcattcgagggcgacgacgggctgaatggcgtacacatgcagcagcacatgct 609
             ||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||| || 
Sbjct: 28716 acctggctcatccgtgggcgtcggcgtgcagaatggcgtacacaagcagctgcacaagca 28657

                  
Query: 610   atcat 614
             |||||
Sbjct: 28656 atcat 28652



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>dbj|AB110953.1| Nicotiana tabacum NtPERK1 mRNA for PERK1-like protein kinase,
           partial cds
          Length = 1083

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                       
Query: 502 ccttcattaagatcctccaaagacacgtcaccttctaaggcccgaacaacctgactcatt 561
           ||||||||||||||   ||| |||||||| ||||| |  || |  |||||||||||||| 
Sbjct: 555 ccttcattaagatcggacaatgacacgtctccttccagagctctgacaacctgactcatg 496

                                                       
Query: 562 cgagggcgacgacgggctgaatggcgtacacatgcagcagcaca 605
           || || ||||| |  |||||||| || ||||| |||||||||||
Sbjct: 495 cgtggtcgacgccttgctgaatgacggacacaagcagcagcaca 452



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>ref|NM_113366.2| Arabidopsis thaliana ATP binding / protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT3G24550 mRNA, complete cds
          Length = 2377

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||||||| |||||||||||
Sbjct: 1643 ggtcgtgcccagtcaactaagctgtcatc 1615



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>ref|NM_113365.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT3G24540 mRNA, complete cds
          Length = 1530

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||| |||||||||||||||||
Sbjct: 1187 ggtcgtgcccaatcaaccaagctgtcatc 1159



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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 349     tactcgctcgtcggcgcgctg 369
               |||||||||||||||||||||
Sbjct: 2589221 tactcgctcgtcggcgcgctg 2589201



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>gb|BC075486.1| Xenopus tropicalis MGC89323 protein, mRNA (cDNA clone MGC:89323
           IMAGE:6987428), complete cds
          Length = 4299

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 502 ccttcattaagatcctccaaa 522
           |||||||||||||||||||||
Sbjct: 509 ccttcattaagatcctccaaa 489



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>gb|AY536856.1| Arabidopsis thaliana putative protein kinase (At3g24550) mRNA,
           partial cds
          Length = 668

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 706 ggtcttgcccagtcaaccaagctgtcatc 734
           |||| |||||||||||| |||||||||||
Sbjct: 221 ggtcgtgcccagtcaactaagctgtcatc 193



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>gb|AC118755.7| Homo sapiens chromosome 17, clone RP11-55L4, complete sequence
          Length = 188765

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   gagaagtcaaaaagaagaaga 224
             |||||||||||||||||||||
Sbjct: 61998 gagaagtcaaaaagaagaaga 62018



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>gb|AC021218.9| Homo sapiens BAC clone RP11-525O1 from 7, complete sequence
          Length = 159482

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 457   gaactgctgtatgatccaaaa 477
             |||||||||||||||||||||
Sbjct: 63366 gaactgctgtatgatccaaaa 63386



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>gb|DQ446692.1| Arabidopsis thaliana clone pENTR221-At3g24540 protein kinase family
            protein (At3g24540) mRNA, complete cds
          Length = 1783

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||| |||||||||||||||||
Sbjct: 1319 ggtcgtgcccaatcaaccaagctgtcatc 1291



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>gb|BT008409.1| Arabidopsis thaliana At3g24600 gene, complete cds
          Length = 1959

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||||||| |||||||||||
Sbjct: 1490 ggtcgtgcccagtcaactaagctgtcatc 1462



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>gb|BT008400.1| Arabidopsis thaliana At3g24550 gene, complete cds
          Length = 1959

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||||||| |||||||||||
Sbjct: 1490 ggtcgtgcccagtcaactaagctgtcatc 1462



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>gb|AY128792.1| Arabidopsis thaliana protein kinase-like protein mRNA, complete cds
          Length = 2098

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||||||| |||||||||||
Sbjct: 1490 ggtcgtgcccagtcaactaagctgtcatc 1462



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>gb|AY093065.1| Arabidopsis thaliana unknown protein (At3g24550) mRNA, complete cds
          Length = 2190

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||||||| |||||||||||
Sbjct: 1519 ggtcgtgcccagtcaactaagctgtcatc 1491



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>ref|XM_689578.1| PREDICTED: Danio rerio similar to regulatory factor X, 5 (influences
            HLA class II expression) (LOC566305), mRNA
          Length = 4458

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 109  agaatcaacaactgcagctaccaga 133
            ||||||||||||||||||| |||||
Sbjct: 3857 agaatcaacaactgcagcttccaga 3881



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>gb|AY059901.1| Arabidopsis thaliana protein kinase-like protein (MOB24.13) mRNA,
            complete cds
          Length = 2188

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||||||| |||||||||||
Sbjct: 1521 ggtcgtgcccagtcaactaagctgtcatc 1493



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>gb|AY056788.1| Arabidopsis thaliana AT3g24550/MOB24_8 mRNA, complete cds
          Length = 2116

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||||||| |||||||||||
Sbjct: 1526 ggtcgtgcccagtcaactaagctgtcatc 1498



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>gb|AF370509.1|AF370509 Arabidopsis thaliana protein kinase-like protein (MOB24.13) mRNA,
            complete cds
          Length = 2257

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||||||| |||||||||||
Sbjct: 1596 ggtcgtgcccagtcaactaagctgtcatc 1568



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 349      tactcgctcgtcggcgcgctg 369
                |||||||||||||||||||||
Sbjct: 19939056 tactcgctcgtcggcgcgctg 19939036



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>gb|AY028699.1| Brassica napus receptor protein kinase PERK1 mRNA, complete cds
          Length = 2189

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||||||| |||||||||||
Sbjct: 1571 ggtcgtgcccagtcaactaagctgtcatc 1543



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>emb|BX823746.1|CNS0A4QX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS71ZE12 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2106

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||||||| |||||||||||
Sbjct: 1563 ggtcgtgcccagtcaactaagctgtcatc 1535



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>ref|NM_001004970.1| Xenopus tropicalis MGC89323 protein (MGC89323), mRNA
          Length = 4299

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 502 ccttcattaagatcctccaaa 522
           |||||||||||||||||||||
Sbjct: 509 ccttcattaagatcctccaaa 489



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>gb|AY089024.1| Arabidopsis thaliana clone 17909 mRNA, complete sequence
          Length = 2324

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 706  ggtcttgcccagtcaaccaagctgtcatc 734
            |||| |||||||||||| |||||||||||
Sbjct: 1591 ggtcgtgcccagtcaactaagctgtcatc 1563



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>gb|AC087501.16| Homo sapiens chromosome 17, clone RP11-565F19, complete sequence
          Length = 192197

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   gagaagtcaaaaagaagaaga 224
             |||||||||||||||||||||
Sbjct: 36127 gagaagtcaaaaagaagaaga 36147



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>dbj|AK099395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J11, full
           insert sequence
          Length = 1857

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 349 tactcgctcgtcggcgcgctg 369
           |||||||||||||||||||||
Sbjct: 270 tactcgctcgtcggcgcgctg 290



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>dbj|AK061613.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B07, full
           insert sequence
          Length = 1729

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 349 tactcgctcgtcggcgcgctg 369
           |||||||||||||||||||||
Sbjct: 264 tactcgctcgtcggcgcgctg 284



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 349      tactcgctcgtcggcgcgctg 369
                |||||||||||||||||||||
Sbjct: 19865270 tactcgctcgtcggcgcgctg 19865250



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>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 165433

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 349   tactcgctcgtcggcgcgctg 369
             |||||||||||||||||||||
Sbjct: 88204 tactcgctcgtcggcgcgctg 88224


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,196,965
Number of Sequences: 3902068
Number of extensions: 6196965
Number of successful extensions: 109121
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108860
Number of HSP's gapped (non-prelim): 254
length of query: 734
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 711
effective length of database: 17,143,297,704
effective search space: 12188884667544
effective search space used: 12188884667544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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