ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags20b24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 141 3e-30
2gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome... 141 3e-30
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
4gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare str... 141 3e-30
5ref|NM_116755.4| Arabidopsis thaliana 4-coumarate-CoA ligase/ fa... 68 4e-08
6gb|AY250839.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like ... 68 4e-08
7gb|AY122950.1| Arabidopsis thaliana putative 4-coumarate--CoA li... 68 4e-08
8gb|AY091079.1| Arabidopsis thaliana putative 4-coumarate--CoA li... 68 4e-08
9gb|BT013439.1| Lycopersicon esculentum clone 132080F, mRNA sequence 66 2e-07
10emb|BX827081.1|CNS0A38R Arabidopsis thaliana Full-length cDNA Co... 64 6e-07
11dbj|D43773.1|TOB4CCAL Nicotiana tabacum mRNA for 4-coumarate:coe... 52 0.002
12gb|AY812766.1| Schistosoma japonicum SJCHGC06080 protein mRNA, c... 44 0.58
13gb|AC007975.7|AC007975 Drosophila melanogaster, chromosome 3R, r... 44 0.58
14gb|AE003776.2| Drosophila melanogaster chromosome 3R, section 11... 44 0.58
15gb|AC148154.15| Medicago truncatula clone mth2-17a6, complete se... 42 2.3
16gb|AC126790.38| Medicago truncatula clone mth2-10d14, complete s... 42 2.3
17gb|AC127020.16| Medicago truncatula clone mth2-9p1, complete seq... 42 2.3
18gb|AC087091.2| Homo sapiens chromosome 3 clone RP11-605M1 map 3p... 42 2.3
19gb|AC026187.4| Homo sapiens chromosome 3 clone RP11-306H5 map 3p... 42 2.3
20ref|XM_602450.2| PREDICTED: Bos taurus similar to StAR-related l... 40 9.1
21emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, ... 40 9.1
22emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, ... 40 9.1
23gb|AC083812.24| Homo sapiens 12 BAC RP11-288D9 (Roswell Park Can... 40 9.1
24dbj|AB196456.1| Luciola cruciata mRNA for hypothetical protein, ... 40 9.1
25gb|AC099517.2| Homo sapiens chromosome 5 clone RP11-5H14, comple... 40 9.1
26gb|AF008184.1|AF008184 Populus x generosa strain H11 4-coumarate... 40 9.1
27gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis thaliana... 40 9.1
28gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana... 40 9.1
29emb|AL833804.16| Mouse DNA sequence from clone RP23-20A6 on chro... 40 9.1
30emb|X89530.1|AMAVAIREP Apis mellifera carnica DNA for Ava I repeat 40 9.1 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  141 bits (71), Expect = 3e-30
 Identities = 123/139 (88%), Gaps = 1/139 (0%)
 Strand = Plus / Plus

                                                                           
Query: 497     cctttgtacttaatcagctcttttagtctatcgacgacaaaaagctggccttcttattca 556
               ||||||||||||||||| ||||| |||||||| || ||||||||||||||| ||   || 
Sbjct: 2866466 cctttgtacttaatcagttctttaagtctatcaacaacaaaaagctggcctcctccgtcg 2866525

                                                                           
Query: 557     aagtatccaagatcaccagtatgcaaccatccttgcctggattgtaaattcagtagcctc 616
               |||||||||||||||||||| |||||||| ||||| || |||||||||||||||||| | 
Sbjct: 2866526 aagtatccaagatcaccagtgtgcaaccacccttg-cttgattgtaaattcagtagcttg 2866584

                                  
Query: 617     tacattgttgaaataccct 635
                ||||||||||||||||||
Sbjct: 2866585 cacattgttgaaataccct 2866603



 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                           
Query: 419     acgggataacgacggcgtctagaatctctggatgagatagaagtaatccttcaagctcag 478
               |||||||||| || || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 2865658 acgggataacaacagcatctagaatctctggatgagatagaagtaacccttcaagctcgg 2865717

                           
Query: 479     caggtgcaatct 490
               ||||||||||||
Sbjct: 2865718 caggtgcaatct 2865729



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                           
Query: 328     ataaatttttggacgtccacttcggttaatgaactggcaggtgacctcaccacataggca 387
               |||||||||||||| || ||||| || ||||||||| |||||||||  || |||||||||
Sbjct: 2865429 ataaatttttggacatcaacttctgtcaatgaactgtcaggtgaccgaacaacataggca 2865488

                                            
Query: 388     ataggaacttccccagcttcatcatcagg 416
               || ||||| |||||||||| | |||||||
Sbjct: 2865489 atgggaacctccccagctttagcatcagg 2865517



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                           
Query: 238     cttctcaagatcttgcctgcggctgattttggcacgctctccacgaaggtaacccgcctc 297
               |||||||  ||||| ||||  |||||||| ||||||||  |||| |||||||| | | ||
Sbjct: 2864950 cttctcagaatctttcctgaagctgatttgggcacgctgcccacaaaggtaactctcttc 2865009

                               
Query: 298     agtcttttgtagtacg 313
               | ||||||||||||||
Sbjct: 2865010 aatcttttgtagtacg 2865025
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>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0016I15, complete sequence
          Length = 166282

 Score =  141 bits (71), Expect = 3e-30
 Identities = 123/139 (88%), Gaps = 1/139 (0%)
 Strand = Plus / Plus

                                                                        
Query: 497  cctttgtacttaatcagctcttttagtctatcgacgacaaaaagctggccttcttattca 556
            ||||||||||||||||| ||||| |||||||| || ||||||||||||||| ||   || 
Sbjct: 3953 cctttgtacttaatcagttctttaagtctatcaacaacaaaaagctggcctcctccgtcg 4012

                                                                        
Query: 557  aagtatccaagatcaccagtatgcaaccatccttgcctggattgtaaattcagtagcctc 616
            |||||||||||||||||||| |||||||| ||||| || |||||||||||||||||| | 
Sbjct: 4013 aagtatccaagatcaccagtgtgcaaccacccttg-cttgattgtaaattcagtagcttg 4071

                               
Query: 617  tacattgttgaaataccct 635
             ||||||||||||||||||
Sbjct: 4072 cacattgttgaaataccct 4090



 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                        
Query: 419  acgggataacgacggcgtctagaatctctggatgagatagaagtaatccttcaagctcag 478
            |||||||||| || || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 3145 acgggataacaacagcatctagaatctctggatgagatagaagtaacccttcaagctcgg 3204

                        
Query: 479  caggtgcaatct 490
            ||||||||||||
Sbjct: 3205 caggtgcaatct 3216



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                        
Query: 328  ataaatttttggacgtccacttcggttaatgaactggcaggtgacctcaccacataggca 387
            |||||||||||||| || ||||| || ||||||||| |||||||||  || |||||||||
Sbjct: 2916 ataaatttttggacatcaacttctgtcaatgaactgtcaggtgaccgaacaacataggca 2975

                                         
Query: 388  ataggaacttccccagcttcatcatcagg 416
            || ||||| |||||||||| | |||||||
Sbjct: 2976 atgggaacctccccagctttagcatcagg 3004



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                        
Query: 238  cttctcaagatcttgcctgcggctgattttggcacgctctccacgaaggtaacccgcctc 297
            |||||||  ||||| ||||  |||||||| ||||||||  |||| |||||||| | | ||
Sbjct: 2437 cttctcagaatctttcctgaagctgatttgggcacgctgcccacaaaggtaactctcttc 2496

                            
Query: 298  agtcttttgtagtacg 313
            | ||||||||||||||
Sbjct: 2497 aatcttttgtagtacg 2512
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  141 bits (71), Expect = 3e-30
 Identities = 123/139 (88%), Gaps = 1/139 (0%)
 Strand = Plus / Plus

                                                                           
Query: 497     cctttgtacttaatcagctcttttagtctatcgacgacaaaaagctggccttcttattca 556
               ||||||||||||||||| ||||| |||||||| || ||||||||||||||| ||   || 
Sbjct: 2866577 cctttgtacttaatcagttctttaagtctatcaacaacaaaaagctggcctcctccgtcg 2866636

                                                                           
Query: 557     aagtatccaagatcaccagtatgcaaccatccttgcctggattgtaaattcagtagcctc 616
               |||||||||||||||||||| |||||||| ||||| || |||||||||||||||||| | 
Sbjct: 2866637 aagtatccaagatcaccagtgtgcaaccacccttg-cttgattgtaaattcagtagcttg 2866695

                                  
Query: 617     tacattgttgaaataccct 635
                ||||||||||||||||||
Sbjct: 2866696 cacattgttgaaataccct 2866714



 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                           
Query: 419     acgggataacgacggcgtctagaatctctggatgagatagaagtaatccttcaagctcag 478
               |||||||||| || || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 2865769 acgggataacaacagcatctagaatctctggatgagatagaagtaacccttcaagctcgg 2865828

                           
Query: 479     caggtgcaatct 490
               ||||||||||||
Sbjct: 2865829 caggtgcaatct 2865840



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                           
Query: 328     ataaatttttggacgtccacttcggttaatgaactggcaggtgacctcaccacataggca 387
               |||||||||||||| || ||||| || ||||||||| |||||||||  || |||||||||
Sbjct: 2865540 ataaatttttggacatcaacttctgtcaatgaactgtcaggtgaccgaacaacataggca 2865599

                                            
Query: 388     ataggaacttccccagcttcatcatcagg 416
               || ||||| |||||||||| | |||||||
Sbjct: 2865600 atgggaacctccccagctttagcatcagg 2865628



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                           
Query: 238     cttctcaagatcttgcctgcggctgattttggcacgctctccacgaaggtaacccgcctc 297
               |||||||  ||||| ||||  |||||||| ||||||||  |||| |||||||| | | ||
Sbjct: 2865061 cttctcagaatctttcctgaagctgatttgggcacgctgcccacaaaggtaactctcttc 2865120

                               
Query: 298     agtcttttgtagtacg 313
               | ||||||||||||||
Sbjct: 2865121 aatcttttgtagtacg 2865136
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>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0038D20, from chromosome 3, complete sequence
          Length = 165395

 Score =  141 bits (71), Expect = 3e-30
 Identities = 123/139 (88%), Gaps = 1/139 (0%)
 Strand = Plus / Plus

                                                                          
Query: 497    cctttgtacttaatcagctcttttagtctatcgacgacaaaaagctggccttcttattca 556
              ||||||||||||||||| ||||| |||||||| || ||||||||||||||| ||   || 
Sbjct: 138422 cctttgtacttaatcagttctttaagtctatcaacaacaaaaagctggcctcctccgtcg 138481

                                                                          
Query: 557    aagtatccaagatcaccagtatgcaaccatccttgcctggattgtaaattcagtagcctc 616
              |||||||||||||||||||| |||||||| ||||| || |||||||||||||||||| | 
Sbjct: 138482 aagtatccaagatcaccagtgtgcaaccacccttg-cttgattgtaaattcagtagcttg 138540

                                 
Query: 617    tacattgttgaaataccct 635
               ||||||||||||||||||
Sbjct: 138541 cacattgttgaaataccct 138559



 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                          
Query: 419    acgggataacgacggcgtctagaatctctggatgagatagaagtaatccttcaagctcag 478
              |||||||||| || || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 137614 acgggataacaacagcatctagaatctctggatgagatagaagtaacccttcaagctcgg 137673

                          
Query: 479    caggtgcaatct 490
              ||||||||||||
Sbjct: 137674 caggtgcaatct 137685



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                          
Query: 328    ataaatttttggacgtccacttcggttaatgaactggcaggtgacctcaccacataggca 387
              |||||||||||||| || ||||| || ||||||||| |||||||||  || |||||||||
Sbjct: 137385 ataaatttttggacatcaacttctgtcaatgaactgtcaggtgaccgaacaacataggca 137444

                                           
Query: 388    ataggaacttccccagcttcatcatcagg 416
              || ||||| |||||||||| | |||||||
Sbjct: 137445 atgggaacctccccagctttagcatcagg 137473



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                          
Query: 238    cttctcaagatcttgcctgcggctgattttggcacgctctccacgaaggtaacccgcctc 297
              |||||||  ||||| ||||  |||||||| ||||||||  |||| |||||||| | | ||
Sbjct: 136906 cttctcagaatctttcctgaagctgatttgggcacgctgcccacaaaggtaactctcttc 136965

                              
Query: 298    agtcttttgtagtacg 313
              | ||||||||||||||
Sbjct: 136966 aatcttttgtagtacg 136981
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>ref|NM_116755.4| Arabidopsis thaliana 4-coumarate-CoA ligase/ fatty-acyl-CoA synthase
            AT4G05160 mRNA, complete cds
          Length = 1861

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                        
Query: 385  gcaataggaacttccccagcttcatcatcagggaacgggataacgacggcgtctagaatc 444
            ||||| |||||||| || ||||| ||||||||||||||||||||||| || ||||| || 
Sbjct: 1520 gcaattggaacttcacctgcttcttcatcagggaacgggataacgacagcatctagtata 1461

                                                              
Query: 445  tctggatgagatagaagtaatccttcaagctcagcaggtgcaatctggaa 494
            || ||||| |||| ||| |  ||||| || ||||| || |||| ||||||
Sbjct: 1460 tcaggatgtgatacaagaagaccttctagttcagctggagcaacctggaa 1411
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>gb|AY250839.1| Arabidopsis thaliana 4-coumarate-CoA ligase-like protein (At4g05160)
            mRNA, complete cds
          Length = 1635

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                        
Query: 385  gcaataggaacttccccagcttcatcatcagggaacgggataacgacggcgtctagaatc 444
            ||||| |||||||| || ||||| ||||||||||||||||||||||| || ||||| || 
Sbjct: 1454 gcaattggaacttcacctgcttcttcatcagggaacgggataacgacagcatctagtata 1395

                                                              
Query: 445  tctggatgagatagaagtaatccttcaagctcagcaggtgcaatctggaa 494
            || ||||| |||| ||| |  ||||| || ||||| || |||| ||||||
Sbjct: 1394 tcaggatgtgatacaagaagaccttctagttcagctggagcaacctggaa 1345
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>gb|AY122950.1| Arabidopsis thaliana putative 4-coumarate--CoA ligase (At4g05160)
            mRNA, complete cds
          Length = 1666

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                        
Query: 385  gcaataggaacttccccagcttcatcatcagggaacgggataacgacggcgtctagaatc 444
            ||||| |||||||| || ||||| ||||||||||||||||||||||| || ||||| || 
Sbjct: 1454 gcaattggaacttcacctgcttcttcatcagggaacgggataacgacagcatctagtata 1395

                                                              
Query: 445  tctggatgagatagaagtaatccttcaagctcagcaggtgcaatctggaa 494
            || ||||| |||| ||| |  ||||| || ||||| || |||| ||||||
Sbjct: 1394 tcaggatgtgatacaagaagaccttctagttcagctggagcaacctggaa 1345
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>gb|AY091079.1| Arabidopsis thaliana putative 4-coumarate--CoA ligase (At4g05160)
            mRNA, complete cds
          Length = 1788

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                        
Query: 385  gcaataggaacttccccagcttcatcatcagggaacgggataacgacggcgtctagaatc 444
            ||||| |||||||| || ||||| ||||||||||||||||||||||| || ||||| || 
Sbjct: 1496 gcaattggaacttcacctgcttcttcatcagggaacgggataacgacagcatctagtata 1437

                                                              
Query: 445  tctggatgagatagaagtaatccttcaagctcagcaggtgcaatctggaa 494
            || ||||| |||| ||| |  ||||| || ||||| || |||| ||||||
Sbjct: 1436 tcaggatgtgatacaagaagaccttctagttcagctggagcaacctggaa 1387
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>gb|BT013439.1| Lycopersicon esculentum clone 132080F, mRNA sequence
          Length = 1962

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 106/129 (82%), Gaps = 1/129 (0%)
 Strand = Plus / Minus

                                                                        
Query: 391  ggaacttccccagcttcatcatcagggaacgggataacgacggcgtctagaatctctgga 450
            ||||| || ||||| ||| ||||||| ||||||||||| || || ||||  || || |||
Sbjct: 1498 ggaacctcaccagcctcagcatcaggaaacgggataacaacagcatctaatatttcagga 1439

                                                                        
Query: 451  tgagatagaagtaatccttcaagctcagcaggtgcaatctggaaaccctttgtacttaat 510
            ||||| | |||||  ||||||||||| || ||||||| || |||| ||||||||||| ||
Sbjct: 1438 tgagaaacaagtagaccttcaagctctgctggtgcaacct-gaaaacctttgtacttgat 1380

                     
Query: 511  cagctcttt 519
             ||||||||
Sbjct: 1379 gagctcttt 1371
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>emb|BX827081.1|CNS0A38R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB93ZB08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1821

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 385  gcaataggaacttccccagcttcatcatcagggaacgggataacgacggcgtctag 440
            ||||| |||||||| || ||||| ||||||||||||||||||||||| || |||||
Sbjct: 1480 gcaattggaacttcacctgcttcttcatcagggaacgggataacgacagcatctag 1425
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>dbj|D43773.1|TOB4CCAL Nicotiana tabacum mRNA for 4-coumarate:coenzyme A ligase, complete
            cds
          Length = 1888

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 45/50 (90%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                              
Query: 467  cttcaagctcagcaggtgcaatctggaaaccctttgtacttaatcagctc 516
            |||| |||||||||||||||| || |||| |||||||| |||||||||||
Sbjct: 1392 cttcgagctcagcaggtgcaa-cttgaaatcctttgtatttaatcagctc 1344
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>gb|AY812766.1| Schistosoma japonicum SJCHGC06080 protein mRNA, complete cds
          Length = 835

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 563 ccaagatcaccagtatgcaaccatcc 588
           |||| |||||||||||||||||||||
Sbjct: 144 ccaatatcaccagtatgcaaccatcc 119
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>gb|AC007975.7|AC007975 Drosophila melanogaster, chromosome 3R, region 100A-100B, BAC clone
              BACR06P08, complete sequence
          Length = 180630

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 27     tcaatttaaaacaatggtttcg 48
              ||||||||||||||||||||||
Sbjct: 112285 tcaatttaaaacaatggtttcg 112306
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>gb|AE003776.2| Drosophila melanogaster chromosome 3R, section 114 of 118 of the complete
              sequence
          Length = 225764

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 27     tcaatttaaaacaatggtttcg 48
              ||||||||||||||||||||||
Sbjct: 106911 tcaatttaaaacaatggtttcg 106932
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>gb|AC148154.15| Medicago truncatula clone mth2-17a6, complete sequence
          Length = 138465

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    caatgttgagattgagagtta 88
             |||||||||||||||||||||
Sbjct: 13394 caatgttgagattgagagtta 13414
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>gb|AC126790.38| Medicago truncatula clone mth2-10d14, complete sequence
          Length = 127447

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     caatgttgagattgagagtta 88
              |||||||||||||||||||||
Sbjct: 124721 caatgttgagattgagagtta 124741
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>gb|AC127020.16| Medicago truncatula clone mth2-9p1, complete sequence
          Length = 127642

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 68   caatgttgagattgagagtta 88
            |||||||||||||||||||||
Sbjct: 1398 caatgttgagattgagagtta 1378
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>gb|AC087091.2| Homo sapiens chromosome 3 clone RP11-605M1 map 3p, complete sequence
          Length = 153013

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 602  aaattcagtagcctctacatt 622
            |||||||||||||||||||||
Sbjct: 2817 aaattcagtagcctctacatt 2837
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>gb|AC026187.4| Homo sapiens chromosome 3 clone RP11-306H5 map 3p, complete sequence
          Length = 184087

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 602   aaattcagtagcctctacatt 622
             |||||||||||||||||||||
Sbjct: 18868 aaattcagtagcctctacatt 18848
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>ref|XM_602450.2| PREDICTED: Bos taurus similar to StAR-related lipid transfer protein
            9 (StARD9) (START domain-containing protein 9)
            (LOC524130), partial mRNA
          Length = 11958

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 394  acttccccagcttcatcatc 413
            ||||||||||||||||||||
Sbjct: 5228 acttccccagcttcatcatc 5209
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>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15
          Length = 199987

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 385  gcaataggaacttccccagcttcatcatcagggaac 420
            ||||| |||||||| || ||||| ||||||||||||
Sbjct: 4737 gcaattggaacttcacctgcttcttcatcagggaac 4702
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>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14
          Length = 198563

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 385    gcaataggaacttccccagcttcatcatcagggaac 420
              ||||| |||||||| || ||||| ||||||||||||
Sbjct: 198300 gcaattggaacttcacctgcttcttcatcagggaac 198265
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>gb|AC083812.24| Homo sapiens 12 BAC RP11-288D9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 162738

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     gatcttttgtacaatgttga 76
              ||||||||||||||||||||
Sbjct: 133258 gatcttttgtacaatgttga 133277
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>dbj|AB196456.1| Luciola cruciata mRNA for hypothetical protein, complete cds,
            clone:LCL2
          Length = 2354

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 569  tcaccagtatgcaaccatcc 588
            ||||||||||||||||||||
Sbjct: 1401 tcaccagtatgcaaccatcc 1382
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>gb|AC099517.2| Homo sapiens chromosome 5 clone RP11-5H14, complete sequence
          Length = 150438

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 534   caaaaagctggccttcttattcaa 557
             |||| |||||||||||||||||||
Sbjct: 66202 caaatagctggccttcttattcaa 66225
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>gb|AF008184.1|AF008184 Populus x generosa strain H11 4-coumarate:CoA ligase 1 (4CL1) mRNA,
            complete cds
          Length = 2042

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 63/76 (82%), Gaps = 1/76 (1%)
 Strand = Plus / Minus

                                                                        
Query: 467  cttcaagctcagcaggtgcaatctggaaaccctttgtacttaatcagctcttttagtcta 526
            ||||||||||||||||||| | || |||| || ||||| |||||||  ||||| |||| |
Sbjct: 1394 cttcaagctcagcaggtgcta-cttgaaaacccttgtatttaatcaattctttcagtcga 1336

                            
Query: 527  tcgacgacaaaaagct 542
            || |||| ||| ||||
Sbjct: 1335 tcaacgataaagagct 1320
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>gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis thaliana Clone C6L9, Chromosome IV,
              complete sequence
          Length = 145453

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 385    gcaataggaacttccccagcttcatcatcagggaac 420
              ||||| |||||||| || ||||| ||||||||||||
Sbjct: 110559 gcaattggaacttcacctgcttcttcatcagggaac 110594
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>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV,
             complete sequence
          Length = 183147

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 385   gcaataggaacttccccagcttcatcatcagggaac 420
             ||||| |||||||| || ||||| ||||||||||||
Sbjct: 54810 gcaattggaacttcacctgcttcttcatcagggaac 54845
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>emb|AL833804.16| Mouse DNA sequence from clone RP23-20A6 on chromosome 2, complete
              sequence
          Length = 200521

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    agcagattttcctataactt 209
              ||||||||||||||||||||
Sbjct: 155952 agcagattttcctataactt 155933
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>emb|X89530.1|AMAVAIREP Apis mellifera carnica DNA for Ava I repeat
          Length = 547

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 180 acgatatcgaagcagatttt 199
           ||||||||||||||||||||
Sbjct: 522 acgatatcgaagcagatttt 503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,533,451
Number of Sequences: 3902068
Number of extensions: 5533451
Number of successful extensions: 96444
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 96299
Number of HSP's gapped (non-prelim): 141
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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