ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags20b10 |
|---|---|
| Clone Library Name | barley_pub |
>SYE_VIBVY (Q7MMW8) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 474 Score = 31.2 bits (69), Expect = 3.1 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 10/71 (14%) Frame = -2 Query: 587 VEGNHQEVLNVNDDKLQELKKEWGEGP---------HKAVVDALM-EMKEYNCLGDRSIV 438 +E N QE ++ + +Q L EW EGP + +VD L+ E K Y C + ++ Sbjct: 46 LERNSQEAVDAILEGMQWLGLEWNEGPYFQTQRFDRYNEMVDKLLAEDKAYKCYASKELL 105 Query: 437 YELWNYNEGRK 405 E+ E K Sbjct: 106 DEVRAEQEANK 116
>SYE_VIBVU (Q8DFH5) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 474 Score = 31.2 bits (69), Expect = 3.1 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 10/71 (14%) Frame = -2 Query: 587 VEGNHQEVLNVNDDKLQELKKEWGEGP---------HKAVVDALM-EMKEYNCLGDRSIV 438 +E N QE ++ + +Q L EW EGP + +VD L+ E K Y C + ++ Sbjct: 46 LERNSQEAVDAILEGMQWLGLEWNEGPYFQTQRFDRYNEMVDKLLAEDKAYKCYASKELL 105 Query: 437 YELWNYNEGRK 405 E+ E K Sbjct: 106 DEVRAEQEANK 116
>SYM_ARCFU (O28819) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 658 Score = 31.2 bits (69), Expect = 3.1 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = -2 Query: 629 RITDVSWNPFNTITVEGNHQEVLNVNDDKLQELKKEWGEGPHKAVVDALMEMKEY 465 R+ +W F + +EG +EVL + Q++ E KA DA ME+ Y Sbjct: 386 RVLLFAWKNFGEVRMEGVDEEVLEKIRETEQKILSALEEWEFKAASDAFMELATY 440
>SYE_VIBF1 (Q5E3L4) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 474 Score = 30.4 bits (67), Expect = 5.2 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 10/71 (14%) Frame = -2 Query: 587 VEGNHQEVLNVNDDKLQELKKEWGEGP---------HKAVVDALM-EMKEYNCLGDRSIV 438 +E N QE ++ + + + EW EGP + VVD L+ E K Y C + ++ Sbjct: 46 LERNSQEAVDAIIEGMHWMGMEWDEGPYYQSKRFDRYNEVVDQLLAEDKAYKCYASKELL 105 Query: 437 YELWNYNEGRK 405 E+ E K Sbjct: 106 DEIRAEQEANK 116
>SYE_VIBPA (Q87RL6) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 474 Score = 30.0 bits (66), Expect = 6.9 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 10/71 (14%) Frame = -2 Query: 587 VEGNHQEVLNVNDDKLQELKKEWGEGP---------HKAVVDALM-EMKEYNCLGDRSIV 438 +E N QE ++ + ++ L EW EGP + +VD L+ E K Y C + ++ Sbjct: 46 LERNSQEAVDAILEGMEWLGLEWDEGPYYQTQRFDRYNEMVDKLLAEDKAYKCYASKELL 105 Query: 437 YELWNYNEGRK 405 E+ E K Sbjct: 106 DEIRAEQEANK 116 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,302,070 Number of Sequences: 219361 Number of extensions: 1670671 Number of successful extensions: 4337 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4241 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4336 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
