| Clone Name | rbags20a18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC099507.3| Homo sapiens chromosome 5 clone RP11-24H18, complete sequence Length = 187386 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 470 atatcataaaagaagtcttctgctt 494 |||||||||||||| |||||||||| Sbjct: 56969 atatcataaaagaaatcttctgctt 56993
>gb|AC007649.12| Homo sapiens 12 BAC RPCI11-90N16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168623 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 152 taacaagttcagacatttcgacaat 176 |||||||||||| |||||||||||| Sbjct: 101342 taacaagttcagccatttcgacaat 101318
>ref|NM_144537.1| Mus musculus carboxypeptidase A5 (Cpa5), mRNA Length = 1964 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 aagcacccagcattctcttgttca 345 ||||||||||||||||| |||||| Sbjct: 153 aagcacccagcattctcatgttca 130
>ref|XM_425847.1| PREDICTED: Gallus gallus LOC428287 (LOC428287), mRNA Length = 942 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 taagcacccagcattctcttgttc 344 ||||||||||||| |||||||||| Sbjct: 698 taagcacccagcagtctcttgttc 675
>gb|AC147707.5| Canis Familiaris, clone XX-10C7, complete sequence Length = 199690 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 cagcattctcttgttcactg 348 |||||||||||||||||||| Sbjct: 111454 cagcattctcttgttcactg 111435
>gb|AY302541.1| Human echovirus 15 strain CH 96-51 complete genome Length = 7437 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 agagctttcaatgacttctc 584 |||||||||||||||||||| Sbjct: 3919 agagctttcaatgacttctc 3900
>gb|AC102922.9| Mus musculus chromosome 1, clone RP24-262J8, complete sequence Length = 178026 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 aggatgggctgatggtaaga 522 |||||||||||||||||||| Sbjct: 162686 aggatgggctgatggtaaga 162705
>gb|AC093516.5| Homo sapiens chromosome 16 clone CTD-2537L13, complete sequence Length = 186814 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 gacatcctcacctatctcttcctc 563 |||||| ||||||||||||||||| Sbjct: 161337 gacatcatcacctatctcttcctc 161360
>emb|AL096705.13|HSJ1085J7 Human DNA sequence from clone RP5-1085J7 on chromosome 10, complete sequence Length = 34836 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 actgacagatttgacagatt 104 |||||||||||||||||||| Sbjct: 19375 actgacagatttgacagatt 19356
>gb|AC010108.6| Drosophila melanogaster 3L BAC RP98-23K9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167187 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 tatcataaaagaagtcttct 490 |||||||||||||||||||| Sbjct: 143869 tatcataaaagaagtcttct 143888
>gb|AC010565.6| Drosophila melanogaster 3L BAC RP98-19A3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 159928 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 tatcataaaagaagtcttct 490 |||||||||||||||||||| Sbjct: 31610 tatcataaaagaagtcttct 31629
>gb|AF466283.1| Mus musculus metallocarboxypeptidase A5 mRNA, complete cds Length = 1964 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 aagcacccagcattctcttgttca 345 ||||||||||||||||| |||||| Sbjct: 153 aagcacccagcattctcatgttca 130
>gb|AC024288.9| Homo sapiens, clone RP11-23B5, complete sequence Length = 169540 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atttcagcatcgctatgaac 121 |||||||||||||||||||| Sbjct: 30043 atttcagcatcgctatgaac 30024
>gb|AC160022.2| Pan troglodytes BAC clone CH251-424F19 from chromosome unknown, complete sequence Length = 197895 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 540 gacatcctcacctatctcttcctc 563 |||||| ||||||||||||||||| Sbjct: 7309 gacatcatcacctatctcttcctc 7286
>gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete sequence Length = 186752 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 catatcttgtatatattaca 276 |||||||||||||||||||| Sbjct: 149907 catatcttgtatatattaca 149888
>dbj|AK015256.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930430M09 product:similar to CARBOXYPEPTIDASE A5 [Homo sapiens], full insert sequence Length = 1966 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 aagcacccagcattctcttgttca 345 ||||||||||||||||| |||||| Sbjct: 153 aagcacccagcattctcatgttca 130
>gb|AC155656.10| Mus musculus 6 BAC RP24-67I3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162118 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 aagcacccagcattctcttgttca 345 ||||||||||||||||| |||||| Sbjct: 75925 aagcacccagcattctcatgttca 75902
>gb|AC131302.5| Mus musculus chromosome 1, clone RP24-117I22, complete sequence Length = 155098 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 aggatgggctgatggtaaga 522 |||||||||||||||||||| Sbjct: 128050 aggatgggctgatggtaaga 128031
>gb|AC073879.7| Homo sapiens BAC clone RP11-752K22 from 2, complete sequence Length = 188181 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ctgacagatttgacagattt 105 |||||||||||||||||||| Sbjct: 45957 ctgacagatttgacagattt 45938
>gb|AC093509.3| Homo sapiens chromosome 16 clone CTD-2337L2, complete sequence Length = 120592 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 540 gacatcctcacctatctcttcctc 563 |||||| ||||||||||||||||| Sbjct: 82368 gacatcatcacctatctcttcctc 82345
>gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, complete sequence Length = 169622 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 catatcttgtatatattaca 276 |||||||||||||||||||| Sbjct: 72518 catatcttgtatatattaca 72499
>gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, complete sequence Length = 224670 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atttcagcatcgctatgaac 121 |||||||||||||||||||| Sbjct: 199771 atttcagcatcgctatgaac 199752
>gb|AC164660.3| Pan troglodytes BAC clone CH251-50D16 from chromosome unknown, complete sequence Length = 246546 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 gacatcctcacctatctcttcctc 563 |||||| ||||||||||||||||| Sbjct: 1332 gacatcatcacctatctcttcctc 1355
>gb|AE003545.3| Drosophila melanogaster chromosome 3L, section 40 of 83 of the complete sequence Length = 282115 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 tatcataaaagaagtcttct 490 |||||||||||||||||||| Sbjct: 202468 tatcataaaagaagtcttct 202487
>dbj|AP006363.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34B12, TM0147b, complete sequence Length = 56052 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 caatcaggatgggctgatgg 517 |||||||||||||||||||| Sbjct: 16807 caatcaggatgggctgatgg 16826 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,615,124 Number of Sequences: 3902068 Number of extensions: 5615124 Number of successful extensions: 103458 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103406 Number of HSP's gapped (non-prelim): 52 length of query: 628 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 605 effective length of database: 17,143,297,704 effective search space: 10371695110920 effective search space used: 10371695110920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)