ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19p17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_483794.1| Oryza sativa (japonica cultivar-group), mRNA 297 2e-77
2ref|XM_507611.1| PREDICTED Oryza sativa (japonica cultivar-group... 297 2e-77
3ref|XM_507342.2| PREDICTED Oryza sativa (japonica cultivar-group... 297 2e-77
4dbj|AK105935.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 2e-77
5dbj|AK102598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 2e-77
6dbj|AK071494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 4e-75
7emb|AJ512373.1|PPA512373 Pogonatherum paniceum partial mRNA for ... 268 2e-68
8emb|AJ320268.1|PPA320268 Pogonatherum paniceum partial mRNA for ... 268 2e-68
9emb|AJ320266.1|SOF320266 Saccharum officinarum partial mRNA for ... 268 2e-68
10emb|AJ833959.1| Paspalidium geminatum partial mRNA for NADP-depe... 262 1e-66
11emb|AJ833960.1| Saccharum hybrid cultivar R570 partial mRNA for ... 260 4e-66
12emb|AJ565857.1|SSP565857 Saccharum sp. partial mRNA for NADP-mal... 260 4e-66
13emb|AJ512375.1|VZI512375 Vetiveria zizanioides partial mRNA for ... 252 9e-64
14emb|AJ512370.1|OCO512370 Oplismenus compositus partial mRNA for ... 244 2e-61
15emb|AJ512369.1|IKO512369 Ischaemum koleostachys partial mRNA for... 244 2e-61
16emb|X53453.1|SBMDHCM7 Sorghum chloroplast CM7 mRNA for malate de... 236 5e-59
17emb|AJ344433.1|VZI344433 Vetiveria zizanioides partial mRNA for ... 236 5e-59
18emb|AJ320267.1|TQU320267 Themeda quadrivalvis partial mRNA for m... 234 2e-58
19emb|AJ512374.1|SVE512374 Sorghum verticilliflorum partial mRNA f... 230 3e-57
20emb|AJ621582.1| Heteropogon contortus partial mRNA for NADP-depe... 228 1e-56
21emb|AJ565856.1|SSP565856 Saccharum spontaneum mRNA for NADP-mala... 228 1e-56
22emb|AJ416567.1|SSP416567 Saccharum spontaneum mRNA for putative ... 228 1e-56
23emb|X53452.1|SBMDHCM3 Sorghum chloroplast CM3 mRNA for malate de... 220 3e-54
24emb|X16084.1|ZMMDH Maize mRNA for chloroplast NADP-malate dehydr... 220 3e-54
25gb|AY105634.1| Zea mays PCO072788 mRNA sequence 220 3e-54
26emb|AJ512372.1|PPA512372 Paspalum paniculatum partial mRNA for N... 220 3e-54
27emb|AJ344432.1|SOF344432 Saccharum officinarum mRNA for NADP-dep... 220 3e-54
28emb|AJ512376.1|TQU512376 Themeda quadrivalvis partial mRNA for N... 216 5e-53
29emb|AJ621580.1| Hyparrhenia rufa partial mRNA for NADP-dependant... 212 8e-52
30emb|AJ512368.1|DAR512368 Dichanthium aristatum partial mRNA for ... 212 8e-52
31emb|AJ512371.1|PMA512371 Panicum maximum partial mRNA for NADP-d... 210 3e-51
32emb|AJ621581.1| Melinis repens partial mRNA for NADP-dependant m... 208 1e-50
33emb|AJ306489.1|VPL306489 Vanilla planifolia partial mRNA for NAD... 94 5e-16
34gb|AY725477.1| Lycopersicon esculentum chloroplast malate dehydr... 88 3e-14
35emb|X54404.1|SVNADPMG S.vulgare NADH II gene for NADP-malate deh... 86 1e-13
36gb|S55884.1| Sorghum bicolor NADP-malate dehydrogenase (NMDH II)... 86 1e-13
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
38dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
39dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
40gb|M31965.1|SRGMDH S.vulgare NADP malate dehydrogenase gene, com... 86 1e-13
41gb|BT013888.1| Lycopersicon esculentum clone 132873F, mRNA sequence 84 5e-13
42emb|AJ849379.1| Lycopersicon esculentum mRNA for chloroplast mal... 84 5e-13
43gb|AF020269.1|AF020269 Medicago sativa chloroplast malate dehydr... 72 2e-09
44gb|L40958.2|FTRNADPMAL Flaveria bidentis NADP-malate dehydrogena... 56 1e-04
45emb|X74507.1|PSMDH P.sativum mdh mRNA for chloroplast malate deh... 54 4e-04
46emb|X63727.1|MCMDH1A M.crystallinum mRNA for NADP-malate dehydro... 52 0.002
47gb|U22533.1|FTU22533 Flaveria trinervia NADP-malate dehydrogenas... 48 0.027
48gb|AY994154.1| Glycine max flavanone 3-hydroxylase (F3H1) gene, ... 46 0.11
49emb|X84020.1|SOMRNAMDH S.oleracea mRNA for NADP-malate dehydroge... 44 0.42
50ref|NM_179725.1| Arabidopsis thaliana ATCNGC14; calmodulin bindi... 42 1.7
51ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosom... 42 1.7
52emb|Z83850.1|HS82J11 Human DNA sequence from clone RP1-82J11 on ... 42 1.7
53emb|AL591074.10| Human DNA sequence from clone XXyac-60D10 on ch... 42 1.7
54gb|AC157645.8| Medicago truncatula clone mth2-70l21, complete se... 42 1.7
55gb|AC090630.10| Homo sapiens 12 BAC RP11-630C16 (Roswell Park Ca... 42 1.7
56gb|AC006954.8| Arabidopsis thaliana chromosome 2 clone F25P17 ma... 42 1.7
57emb|BX323008.5| Zebrafish DNA sequence from clone DKEY-29D16 in ... 42 1.7
58gb|AC154633.2| Mus musculus BAC clone RP23-296I10 from chromosom... 42 1.7
59emb|BX908758.16| Zebrafish DNA sequence from clone DKEY-32G22 in... 42 1.7
60gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome... 40 6.6
61gb|AC149300.1| Populus trichocarpa clone Pop1-040E01, complete s... 40 6.6
62gb|AC149296.1| Populus trichocarpa clone Pop1-012O23, complete s... 40 6.6
63gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complet... 40 6.6
64emb|AL590682.9| Human DNA sequence from clone RP11-435F13 on chr... 40 6.6
65emb|AL513342.7| Human DNA sequence from clone RP11-96F14 on chro... 40 6.6
66emb|AL139274.17| Human DNA sequence from clone RP11-393I2 on chr... 40 6.6
67ref|XM_775488.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.6
68emb|X83924.1|SMSEL183 S.martensii mRNA NADP-dependent malate deh... 40 6.6
69emb|X83925.1|SMSEL5 S.martensii mRNA NADP-dependent malate dehyd... 40 6.6
70gb|AC079684.16| Homo sapiens 12 BAC RP11-351C21 (Roswell Park Ca... 40 6.6
71gb|AC154028.7| Mus musculus 10 BAC RP23-246J13 (Roswell Park Can... 40 6.6
72gb|AC093729.2| Homo sapiens BAC clone RP11-11N6 from 4, complete... 40 6.6
73gb|AC016674.9| Homo sapiens BAC clone RP11-36C8 from 2, complete... 40 6.6
74emb|AJ605553.1| Solanum tuberosum mRNA for putrescine N-methyltr... 40 6.6
75emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein... 40 6.6
76emb|AL663052.8| Mouse DNA sequence from clone RP23-202N14 on chr... 40 6.6

>ref|XM_483794.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1577

 Score =  297 bits (150), Expect = 2e-77
 Identities = 240/270 (88%)
 Strand = Plus / Minus

                                                                        
Query: 210  ctacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcccc 269
            |||||| ||||| |||||||| || || || |||||||||||||||||||| ||||| ||
Sbjct: 1309 ctacatttctcctggaagcatggtgtctccgggaagatcacaaaatgcattgccctctcc 1250

                                                                        
Query: 270  tgtaagatgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatccg 329
             |||||||||||||| ||||||||||| |||| || |||||||||||||||||| |||||
Sbjct: 1249 agtaagatgggcaacgcatcttttctcggcgagcaattcagcttcactcttttttatccg 1190

                                                                        
Query: 330  gccccagagaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccctt 389
              ||||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1189 ttcccagaggaaatcgtccattgccacatctttaactagttcgtagtcaccatcaccctt 1130

                                                                        
Query: 390  tgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccggtcgt 449
            ||| ||||| ||||||||||| ||||| || ||| ||||||||||||||||||| |||||
Sbjct: 1129 tgacctgcatggcatactgaacacgatgtcctctgctatgccataaggatttccagtcgt 1070

                                          
Query: 450  ataaacccctgtagagaaccagtctccttc 479
            ||||||||| ||||||||||| || |||||
Sbjct: 1069 ataaaccccagtagagaaccaatcgccttc 1040



to top

>ref|XM_507611.1| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.47 mRNA
          Length = 1648

 Score =  297 bits (150), Expect = 2e-77
 Identities = 240/270 (88%)
 Strand = Plus / Minus

                                                                        
Query: 210  ctacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcccc 269
            |||||| ||||| |||||||| || || || |||||||||||||||||||| ||||| ||
Sbjct: 1376 ctacatttctcctggaagcatggtgtctccgggaagatcacaaaatgcattgccctctcc 1317

                                                                        
Query: 270  tgtaagatgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatccg 329
             |||||||||||||| ||||||||||| |||| || |||||||||||||||||| |||||
Sbjct: 1316 agtaagatgggcaacgcatcttttctcggcgagcaattcagcttcactcttttttatccg 1257

                                                                        
Query: 330  gccccagagaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccctt 389
              ||||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1256 ttcccagaggaaatcgtccattgccacatctttaactagttcgtagtcaccatcaccctt 1197

                                                                        
Query: 390  tgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccggtcgt 449
            ||| ||||| ||||||||||| ||||| || ||| ||||||||||||||||||| |||||
Sbjct: 1196 tgacctgcatggcatactgaacacgatgtcctctgctatgccataaggatttccagtcgt 1137

                                          
Query: 450  ataaacccctgtagagaaccagtctccttc 479
            ||||||||| ||||||||||| || |||||
Sbjct: 1136 ataaaccccagtagagaaccaatcgccttc 1107



to top

>ref|XM_507342.2| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.47 mRNA
          Length = 1616

 Score =  297 bits (150), Expect = 2e-77
 Identities = 240/270 (88%)
 Strand = Plus / Minus

                                                                        
Query: 210  ctacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcccc 269
            |||||| ||||| |||||||| || || || |||||||||||||||||||| ||||| ||
Sbjct: 1377 ctacatttctcctggaagcatggtgtctccgggaagatcacaaaatgcattgccctctcc 1318

                                                                        
Query: 270  tgtaagatgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatccg 329
             |||||||||||||| ||||||||||| |||| || |||||||||||||||||| |||||
Sbjct: 1317 agtaagatgggcaacgcatcttttctcggcgagcaattcagcttcactcttttttatccg 1258

                                                                        
Query: 330  gccccagagaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccctt 389
              ||||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1257 ttcccagaggaaatcgtccattgccacatctttaactagttcgtagtcaccatcaccctt 1198

                                                                        
Query: 390  tgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccggtcgt 449
            ||| ||||| ||||||||||| ||||| || ||| ||||||||||||||||||| |||||
Sbjct: 1197 tgacctgcatggcatactgaacacgatgtcctctgctatgccataaggatttccagtcgt 1138

                                          
Query: 450  ataaacccctgtagagaaccagtctccttc 479
            ||||||||| ||||||||||| || |||||
Sbjct: 1137 ataaaccccagtagagaaccaatcgccttc 1108



to top

>dbj|AK105935.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B06, full
            insert sequence
          Length = 1648

 Score =  297 bits (150), Expect = 2e-77
 Identities = 240/270 (88%)
 Strand = Plus / Minus

                                                                        
Query: 210  ctacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcccc 269
            |||||| ||||| |||||||| || || || |||||||||||||||||||| ||||| ||
Sbjct: 1376 ctacatttctcctggaagcatggtgtctccgggaagatcacaaaatgcattgccctctcc 1317

                                                                        
Query: 270  tgtaagatgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatccg 329
             |||||||||||||| ||||||||||| |||| || |||||||||||||||||| |||||
Sbjct: 1316 agtaagatgggcaacgcatcttttctcggcgagcaattcagcttcactcttttttatccg 1257

                                                                        
Query: 330  gccccagagaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccctt 389
              ||||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1256 ttcccagaggaaatcgtccattgccacatctttaactagttcgtagtcaccatcaccctt 1197

                                                                        
Query: 390  tgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccggtcgt 449
            ||| ||||| ||||||||||| ||||| || ||| ||||||||||||||||||| |||||
Sbjct: 1196 tgacctgcatggcatactgaacacgatgtcctctgctatgccataaggatttccagtcgt 1137

                                          
Query: 450  ataaacccctgtagagaaccagtctccttc 479
            ||||||||| ||||||||||| || |||||
Sbjct: 1136 ataaaccccagtagagaaccaatcgccttc 1107



to top

>dbj|AK102598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098K09, full
            insert sequence
          Length = 1616

 Score =  297 bits (150), Expect = 2e-77
 Identities = 240/270 (88%)
 Strand = Plus / Minus

                                                                        
Query: 210  ctacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcccc 269
            |||||| ||||| |||||||| || || || |||||||||||||||||||| ||||| ||
Sbjct: 1377 ctacatttctcctggaagcatggtgtctccgggaagatcacaaaatgcattgccctctcc 1318

                                                                        
Query: 270  tgtaagatgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatccg 329
             |||||||||||||| ||||||||||| |||| || |||||||||||||||||| |||||
Sbjct: 1317 agtaagatgggcaacgcatcttttctcggcgagcaattcagcttcactcttttttatccg 1258

                                                                        
Query: 330  gccccagagaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccctt 389
              ||||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1257 ttcccagaggaaatcgtccattgccacatctttaactagttcgtagtcaccatcaccctt 1198

                                                                        
Query: 390  tgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccggtcgt 449
            ||| ||||| ||||||||||| ||||| || ||| ||||||||||||||||||| |||||
Sbjct: 1197 tgacctgcatggcatactgaacacgatgtcctctgctatgccataaggatttccagtcgt 1138

                                          
Query: 450  ataaacccctgtagagaaccagtctccttc 479
            ||||||||| ||||||||||| || |||||
Sbjct: 1137 ataaaccccagtagagaaccaatcgccttc 1108



to top

>dbj|AK071494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095I23, full
            insert sequence
          Length = 1577

 Score =  289 bits (146), Expect = 4e-75
 Identities = 239/270 (88%)
 Strand = Plus / Minus

                                                                        
Query: 210  ctacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcccc 269
            |||||| ||||| |||||||| || || || |||||| ||||||||||||| ||||| ||
Sbjct: 1309 ctacatttctcctggaagcatggtgtctccgggaagaccacaaaatgcattgccctctcc 1250

                                                                        
Query: 270  tgtaagatgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatccg 329
             |||||||||||||| ||||||||||| |||| || |||||||||||||||||| |||||
Sbjct: 1249 agtaagatgggcaacgcatcttttctcggcgagcaattcagcttcactcttttttatccg 1190

                                                                        
Query: 330  gccccagagaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccctt 389
              ||||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1189 ttcccagaggaaatcgtccattgccacatctttaactagttcgtagtcaccatcaccctt 1130

                                                                        
Query: 390  tgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccggtcgt 449
            ||| ||||| ||||||||||| ||||| || ||| ||||||||||||||||||| |||||
Sbjct: 1129 tgacctgcatggcatactgaacacgatgtcctctgctatgccataaggatttccagtcgt 1070

                                          
Query: 450  ataaacccctgtagagaaccagtctccttc 479
            ||||||||| ||||||||||| || |||||
Sbjct: 1069 ataaaccccagtagagaaccaatcgccttc 1040



to top

>emb|AJ512373.1|PPA512373 Pogonatherum paniceum partial mRNA for NADP-dependant malate
            dehydrogenase (nadp-mdh gene)
          Length = 1239

 Score =  268 bits (135), Expect = 2e-68
 Identities = 213/239 (89%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||||||||||||||||||| ||||| ||||||||||||||||| ||| | |||||||| 
Sbjct: 1235 ggaagatcacaaaatgcattcccctctcctgtaagatgggcaacgcatttcttctcagca 1176

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || |||||||||||||||||| |||||  ||||||||||||||||||||| |||||| 
Sbjct: 1175 agcaattcagcttcactctttttaatccgttcccagagaaaatcgtccattgacacatca 1116

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || |||||||||| || ||||| ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 1115 gtagctagttcataatcaccatcacccttcgatctgcatggcatgctgaacacgatatcc 1056

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1055 tctgctatgccataaggatttccagtcgtataaacccctgtagagaaccagtcgccttc 997



to top

>emb|AJ320268.1|PPA320268 Pogonatherum paniceum partial mRNA for malate deshydrogenase (mdh
           gene)
          Length = 357

 Score =  268 bits (135), Expect = 2e-68
 Identities = 213/239 (89%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
           |||||||||||||||||||| ||||| ||||||||||||||||| ||| | |||||||| 
Sbjct: 275 ggaagatcacaaaatgcattcccctctcctgtaagatgggcaacgcatttcttctcagca 216

                                                                       
Query: 301 atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
           | || |||||||||||||||||| |||||  ||||||||||||||||||||| |||||| 
Sbjct: 215 agcaattcagcttcactctttttaatccgttcccagagaaaatcgtccattgacacatca 156

                                                                       
Query: 361 ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
            || |||||||||| || ||||| ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 155 gtagctagttcataatcaccatcacccttcgatctgcatggcatgctgaacacgatatcc 96

                                                                      
Query: 421 tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
           ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 95  tctgctatgccataaggatttccagtcgtataaacccctgtagagaaccagtcgccttc 37



to top

>emb|AJ320266.1|SOF320266 Saccharum officinarum partial mRNA for malate deshydrogenase (mdh
           gene)
          Length = 357

 Score =  268 bits (135), Expect = 2e-68
 Identities = 231/263 (87%)
 Strand = Plus / Minus

                                                                       
Query: 217 tctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcccctgtaaga 276
           ||||| || ||||| |||||| | |||||||||||||||||||| ||||| |||||||||
Sbjct: 299 tctcctggtagcatggtatcctccggaagatcacaaaatgcattcccctctcctgtaaga 240

                                                                       
Query: 277 tgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatccggccccag 336
           |||||||||||| | |||||||| | || |||||||||||||||||| |||||  |||||
Sbjct: 239 tgggcaacacatttcttctcagcaagcaattcagcttcactctttttaatccgttcccag 180

                                                                       
Query: 337 agaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccctttgatctg 396
           |||||||||||||||| ||||||  || ||||||| || || || || ||||| ||||||
Sbjct: 179 agaaaatcgtccattgacacatcagtagctagttcgtaatcaccgtcacccttcgatctg 120

                                                                       
Query: 397 cacggcatactgaatacgatatcatctactatgccataaggatttccggtcgtataaacc 456
           || ||||| ||||| |||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 119 catggcatgctgaacacgatatcctctgctatgccataaggatttccagtcgtataaacc 60

                                  
Query: 457 cctgtagagaaccagtctccttc 479
           ||||||||||||||||| |||||
Sbjct: 59  cctgtagagaaccagtcgccttc 37



to top

>emb|AJ833959.1| Paspalidium geminatum partial mRNA for NADP-dependant malate
            dehydrogenase (nadp-MDH gene)
          Length = 1265

 Score =  262 bits (132), Expect = 1e-66
 Identities = 237/272 (87%)
 Strand = Plus / Minus

                                                                        
Query: 208  cactacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcc 267
            |||||||||||||| || ||||| |||||  | |||||||||||||||||||| ||||| 
Sbjct: 1087 cactacatctctcctggtagcatggtatcttccggaagatcacaaaatgcattcccctct 1028

                                                                        
Query: 268  cctgtaagatgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatc 327
            ||||||||||| ||||||||| | |||||||| | |||||||||||| ||||| || |||
Sbjct: 1027 cctgtaagatgagcaacacatttcttctcagcaagcagttcagcttcgctcttcttaatc 968

                                                                        
Query: 328  cggccccagagaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccc 387
            ||  ||||||||||||||||||||  ||||||  |||||||||||||||| ||||| |||
Sbjct: 967  cgttcccagagaaaatcgtccattaacacatcactaactagttcatagtcaccatccccc 908

                                                                        
Query: 388  tttgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccggtc 447
            ||||||||||| ||||||||||| ||||| || ||| ||||||||||||| ||||| || 
Sbjct: 907  tttgatctgcatggcatactgaacacgatgtcctctgctatgccataagggtttccagtt 848

                                            
Query: 448  gtataaacccctgtagagaaccagtctccttc 479
            ||||||||||||| ||||||||| || |||||
Sbjct: 847  gtataaacccctgaagagaaccaatcgccttc 816



to top

>emb|AJ833960.1| Saccharum hybrid cultivar R570 partial mRNA for NADP-dependant malate
            dehydrogenase (nadp-MDH gene)
          Length = 1059

 Score =  260 bits (131), Expect = 4e-66
 Identities = 212/239 (88%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||||||||||||||||||| ||||| ||||||||||||||||||||| | |||||||| 
Sbjct: 1054 ggaagatcacaaaatgcattcccctctcctgtaagatgggcaacacatttcttctcagca 995

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || |||||||||||||||||| |||||  ||||||||||||||||||||| |||||| 
Sbjct: 994  agcaattcagcttcactctttttaatccgttcccagagaaaatcgtccattgacacatca 935

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||| || || || || ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 934  gtagctagttcgtaatcaccgtcacccttcgatctgcatggcatgctgaacacgatatcc 875

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 874  tctgctatgccataaggatttccagtcgtataaacccctgtagagaaccagtcgccttc 816



to top

>emb|AJ565857.1|SSP565857 Saccharum sp. partial mRNA for NADP-malate dehydrogenase (nadp-MDH
            gene)
          Length = 1058

 Score =  260 bits (131), Expect = 4e-66
 Identities = 212/239 (88%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||||||||||||||||||| ||||| ||||||||||||||||||||| | |||||||| 
Sbjct: 1053 ggaagatcacaaaatgcattcccctctcctgtaagatgggcaacacatttcttctcagca 994

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || |||||||||||||||||| |||||  ||||||||||||||||||||| |||||| 
Sbjct: 993  agcaattcagcttcactctttttaatccgttcccagagaaaatcgtccattgacacatca 934

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||| || || || || ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 933  gtagctagttcgtaatcaccgtcacccttcgatctgcatggcatgctgaacacgatatcc 874

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 873  tctgctatgccataaggatttccagtcgtataaacccctgtagagaaccagtcgccttc 815



to top

>emb|AJ512375.1|VZI512375 Vetiveria zizanioides partial mRNA for NADP-dependant malate
            dehydrogenase (nadp-mdh gene)
          Length = 1248

 Score =  252 bits (127), Expect = 9e-64
 Identities = 211/239 (88%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||||||||||||||||||  ||||| ||||||||||||||||| ||| | |||||||| 
Sbjct: 1244 ggaagatcacaaaatgcatccccctctcctgtaagatgggcaacgcatttcttctcagca 1185

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || |||||||||||||||||| |||||  ||||||||||||||||||||  |||||| 
Sbjct: 1184 agcaattcagcttcactctttttaatccgatcccagagaaaatcgtccattttcacatca 1125

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || |||||||||| || ||||| ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 1124 gtagctagttcataatcaccatcacccttcgatctgcatggcatgctgaacacgatatcc 1065

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1064 tctgctatgccataaggatttccagtcgtataaacccctgtagagaaccagtccccttc 1006



to top

>emb|AJ512370.1|OCO512370 Oplismenus compositus partial mRNA for NADP-dependant malate
            dehydrogenase (nadp-mdh gene)
          Length = 1257

 Score =  244 bits (123), Expect = 2e-61
 Identities = 210/239 (87%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||||||||||| ||||||| ||||| ||||||||||||||||||||| | |||||||| 
Sbjct: 1253 ggaagatcacaatatgcattcccctctcctgtaagatgggcaacacatttcttctcagca 1194

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || |||||||||||||||||| |||||  ||||||||||||||||||||  |||||| 
Sbjct: 1193 agcaattcagcttcactctttttaatccgttcccagagaaaatcgtccattaacacatca 1134

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             |||||||||||||||| || || |||||||||||||| ||||||||||| ||||| || 
Sbjct: 1133 ctaactagttcatagtcaccgtccccctttgatctgcatggcatactgaacacgatgtcc 1074

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| || |||||||||||||  |||||||| || |||||
Sbjct: 1073 tctgctatgccataaggatttccagtagtataaacccctgatgagaaccaatcgccttc 1015



to top

>emb|AJ512369.1|IKO512369 Ischaemum koleostachys partial mRNA for NADP-dependant malate
            dehydrogenase (nadp-mdh gene)
          Length = 1056

 Score =  244 bits (123), Expect = 2e-61
 Identities = 210/239 (87%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||||||||||||||||||| ||||| ||||||||||||||||| ||| | |||||||| 
Sbjct: 1052 ggaagatcacaaaatgcattcccctctcctgtaagatgggcaacgcatttcttctcagca 993

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || |||||||||||||||||| |||||  ||||||||||||||||||||| |||||| 
Sbjct: 992  agcaattcagcttcactctttttaatccgttcccagagaaaatcgtccattgacacatca 933

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||| || || || || ||||| |||||||| ||||| ||||| || ||||| 
Sbjct: 932  gtagctagttcgtaatcaccgtcacccttcgatctgcatggcatgctgaacactatatcc 873

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 872  tctgctatgccataaggatttccagtcgtataaacccctgtagagaaccagtcgccttc 814



to top

>emb|X53453.1|SBMDHCM7 Sorghum chloroplast CM7 mRNA for malate dehydrogenase (NADP)
          Length = 1441

 Score =  236 bits (119), Expect = 5e-59
 Identities = 227/263 (86%)
 Strand = Plus / Minus

                                                                        
Query: 217  tctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcccctgtaaga 276
            ||||| || ||||| |||||| | |||| ||||||| ||||||| ||||| || ||||||
Sbjct: 1295 tctcccggtagcatggtatcctccggaacatcacaatatgcattcccctctccagtaaga 1236

                                                                        
Query: 277  tgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatccggccccag 336
            |||||||| ||| | |||||||| | || |||||||||||||||||| |||||  |||||
Sbjct: 1235 tgggcaacgcatttcttctcagcaagcaattcagcttcactctttttaatccgttcccag 1176

                                                                        
Query: 337  agaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccctttgatctg 396
            |||||||||||||||| ||||||  || ||||||| || || ||||| ||||| ||||||
Sbjct: 1175 agaaaatcgtccattgacacatcagtagctagttcgtaatcaccatcacccttcgatctg 1116

                                                                        
Query: 397  cacggcatactgaatacgatatcatctactatgccataaggatttccggtcgtataaacc 456
            || ||||| ||||| |||||||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 1115 catggcatgctgaacacgatatcctctgctatgccataaggatttccagtcgtataaacc 1056

                                   
Query: 457  cctgtagagaaccagtctccttc 479
            ||||| ||||||||||| |||||
Sbjct: 1055 cctgtggagaaccagtcgccttc 1033



to top

>emb|AJ344433.1|VZI344433 Vetiveria zizanioides partial mRNA for NADP-dependent malate
            dehydrogenase (nadp-MDH gene)
          Length = 1281

 Score =  236 bits (119), Expect = 5e-59
 Identities = 209/239 (87%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||||||||||||| ||||| ||||| ||||||||||||||||| ||| | |||||||| 
Sbjct: 1199 ggaagatcacaaaacgcattgccctctcctgtaagatgggcaacgcatttcttctcagca 1140

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | ||||||||||||||||||||| |||||  ||||||| |||||||||||   |||||| 
Sbjct: 1139 agcagttcagcttcactctttttaatccgttcccagaggaaatcgtccatcatcacatcg 1080

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||| || || ||||| ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 1079 gtagctagttcgtaatcaccatcacccttcgatctgcatggcatgctgaacacgatatcc 1020

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1019 tctgctatgccataaggatttccagtcgtataaacccctgtagagaaccagtcaccttc 961



to top

>emb|AJ320267.1|TQU320267 Themeda quadrivalvis partial mRNA for malate deshydrogenase (mdh
           gene)
          Length = 357

 Score =  234 bits (118), Expect = 2e-58
 Identities = 229/266 (86%)
 Strand = Plus / Minus

                                                                       
Query: 208 cactacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcc 267
           |||||| | ||||| || ||||| |||||  | |||| ||||||  ||||||| ||||| 
Sbjct: 308 cactacttttctcctggtagcatggtatcatccggaacatcacagtatgcattcccctct 249

                                                                       
Query: 268 cctgtaagatgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatc 327
           ||||||||||||||||| ||| | |||||||| | || |||||||||||||||||| |||
Sbjct: 248 cctgtaagatgggcaacgcatttcttctcagcaagcaattcagcttcactctttttaatc 189

                                                                       
Query: 328 cggccccagagaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccc 387
           ||  ||||||||||||||||||||| ||||||  || ||||||| || || || || |||
Sbjct: 188 cgttcccagagaaaatcgtccattgacacatcagtagctagttcgtaatcaccgtcaccc 129

                                                                       
Query: 388 tttgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccggtc 447
           ||||||||||| ||||| ||||| |||||||| ||| ||||||||||||||||||| |||
Sbjct: 128 tttgatctgcatggcatgctgaacacgatatcctctgctatgccataaggatttccagtc 69

                                     
Query: 448 gtataaacccctgtagagaaccagtc 473
           ||||||||||||||||||||||||||
Sbjct: 68  gtataaacccctgtagagaaccagtc 43



to top

>emb|AJ512374.1|SVE512374 Sorghum verticilliflorum partial mRNA for NADP-dependant malate
            dehydrogenase (nadp-mdh gene)
          Length = 1244

 Score =  230 bits (116), Expect = 3e-57
 Identities = 215/248 (86%)
 Strand = Plus / Minus

                                                                        
Query: 232  gtatccccaggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatctt 291
            |||||| | |||| ||||||| ||||||| ||||| || |||||||||||||| ||| | 
Sbjct: 1244 gtatcctccggaacatcacaatatgcattcccctctccagtaagatgggcaacgcatttc 1185

                                                                        
Query: 292  ttctcagcgatcagttcagcttcactctttttgatccggccccagagaaaatcgtccatt 351
            |||||||| | || |||||||||||||||||| |||||  ||||||||||||||||||||
Sbjct: 1184 ttctcagcaagcaattcagcttcactctttttaatccgttcccagagaaaatcgtccatt 1125

                                                                        
Query: 352  gccacatctttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaat 411
            | ||||||  || ||||||| || || ||||| ||||| |||||||| ||||| ||||| 
Sbjct: 1124 gacacatcagtagctagttcgtaatcaccatcacccttcgatctgcatggcatgctgaac 1065

                                                                        
Query: 412  acgatatcatctactatgccataaggatttccggtcgtataaacccctgtagagaaccag 471
            |||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 1064 acgatatcctctgctatgccataaggatttccagtcgtataaacccctgtggagaaccag 1005

                    
Query: 472  tctccttc 479
            || |||||
Sbjct: 1004 tcgccttc 997



to top

>emb|AJ621582.1| Heteropogon contortus partial mRNA for NADP-dependant malate
            dehydrogenase (nadp-MDH gene)
          Length = 1243

 Score =  228 bits (115), Expect = 1e-56
 Identities = 208/239 (87%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||| ||||||  ||||||| ||||| ||||||||||||||||| ||| | |||||||| 
Sbjct: 1238 ggaacatcacagtatgcattcccctctcctgtaagatgggcaacgcatttcttctcagca 1179

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || |||||||||||||||||| |||||  ||||||||||||||||||||| |||||| 
Sbjct: 1178 agcaattcagcttcactctttttaatccgttcccagagaaaatcgtccattgacacatca 1119

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||| || || ||||| ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 1118 gtagctagttcgtaatcaccatcacccttcgatctgcatggcatgctgaacacgatatcc 1059

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 1058 tctgctatgccataaggatttccagtcgtataaacccctgttgagaaccagtcgccttc 1000



to top

>emb|AJ565856.1|SSP565856 Saccharum spontaneum mRNA for NADP-malate dehydrogenase, unproductive
            transcript (nadp-MDH pseudogene)
          Length = 1385

 Score =  228 bits (115), Expect = 1e-56
 Identities = 232/271 (85%)
 Strand = Plus / Minus

                                                                        
Query: 209  actacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctccc 268
            ||||||| ||||| || ||||| |||||  | |||||||||||||||||||  ||||| |
Sbjct: 1333 actacatttctcctggtagcatggtatcttccggaagatcacaaaatgcatccccctctc 1274

                                                                        
Query: 269  ctgtaagatgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatcc 328
            |||||||||||||||| ||| | |||||||| | || |||||||||||||||||| | ||
Sbjct: 1273 ctgtaagatgggcaacgcatttcttctcagcaagcaattcagcttcactctttttaaccc 1214

                                                                        
Query: 329  ggccccagagaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccct 388
            |  ||||||||||||||||||||| ||||||  || ||||||| || || || || ||||
Sbjct: 1213 gttcccagagaaaatcgtccattgacacatcagtagctagttcgtaatcaccgtcaccct 1154

                                                                        
Query: 389  ttgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccggtcg 448
            | |||||||| ||||| ||||| |||||||| ||| ||||||| ||||||||||| ||||
Sbjct: 1153 tcgatctgcatggcatgctgaacacgatatcctctgctatgccgtaaggatttccagtcg 1094

                                           
Query: 449  tataaacccctgtagagaaccagtctccttc 479
            |||||||||| |||||||||||||| |||||
Sbjct: 1093 tataaacccccgtagagaaccagtcaccttc 1063



to top

>emb|AJ416567.1|SSP416567 Saccharum spontaneum mRNA for putative malate deshydrogenase (mdh
            gene)
          Length = 1385

 Score =  228 bits (115), Expect = 1e-56
 Identities = 208/239 (87%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||||||||||||||||||  ||||| ||||||||||||||||| ||| | |||||||| 
Sbjct: 1301 ggaagatcacaaaatgcatccccctctcctgtaagatgggcaacgcatttcttctcagca 1242

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || |||||||||||||||||| |||||  ||||||||||||||||||||| |||||| 
Sbjct: 1241 agcaattcagcttcactctttttaatccgttcccagagaaaatcgtccattgacacatca 1182

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||| || || || || ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 1181 gtagctagttcgtaatcaccgtcacccttcgatctgcatggcatgctgaacacgatatcc 1122

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 1121 tctgctatgccgtaaggatttccagtcgtataaacccccgtagagaaccagtcaccttc 1063



to top

>emb|X53452.1|SBMDHCM3 Sorghum chloroplast CM3 mRNA for malate dehydrogenase (NADP)
          Length = 932

 Score =  220 bits (111), Expect = 3e-54
 Identities = 207/239 (86%)
 Strand = Plus / Minus

                                                                       
Query: 241 ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
           |||||||||||||||||||  ||||| || |||||||||||||| ||| | |||||||| 
Sbjct: 788 ggaagatcacaaaatgcatccccctctccagtaagatgggcaacgcatttcttctcagca 729

                                                                       
Query: 301 atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
           | || |||||||||||||||||| |||||  |||| |||||||||||||||| |||||| 
Sbjct: 728 agcaattcagcttcactctttttaatccgttcccacagaaaatcgtccattgacacatca 669

                                                                       
Query: 361 ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
            || ||||||  || || ||||| ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 668 gtagctagttggtaatcaccatcacccttcgatctgcatggcatgctgaacacgatatcc 609

                                                                      
Query: 421 tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
           ||| ||||||||||||||||||| |||||||||||||||||||||||||| || |||||
Sbjct: 608 tctgctatgccataaggatttccagtcgtataaacccctgtagagaaccactcgccttc 550



to top

>emb|X16084.1|ZMMDH Maize mRNA for chloroplast NADP-malate dehydrogenase (NADP-MDH)
          Length = 1537

 Score =  220 bits (111), Expect = 3e-54
 Identities = 207/239 (86%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            ||||||||||| |||||||| ||||| ||||||||||||||||| ||| | |||||||| 
Sbjct: 1349 ggaagatcacagaatgcattcccctctcctgtaagatgggcaacgcatttcttctcagca 1290

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || ||||||||| |||||||| |||||  |||||||||||||||||||   |||||| 
Sbjct: 1289 agcaattcagcttcgctctttttaatccgttcccagagaaaatcgtccatcaacacatca 1230

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||| || || ||||| ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 1229 ctagctagttcgtaatcaccatcacccttcgatctgcatggcatgctgaacacgatatcc 1170

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 1169 tctgctatgccataaggatttccagtcgtataaacccctgtagaaaaccagtcaccttc 1111



to top

>gb|AY105634.1| Zea mays PCO072788 mRNA sequence
          Length = 1622

 Score =  220 bits (111), Expect = 3e-54
 Identities = 207/239 (86%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            ||||||||||| |||||||| ||||| ||||||||||||||||| ||| | |||||||| 
Sbjct: 1358 ggaagatcacagaatgcattcccctctcctgtaagatgggcaacgcatttcttctcagca 1299

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || ||||||||| |||||||| |||||  |||||||||||||||||||   |||||| 
Sbjct: 1298 agcaattcagcttcgctctttttaatccgttcccagagaaaatcgtccatcaacacatca 1239

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||| || || ||||| ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 1238 ctagctagttcgtaatcaccatcacccttcgatctgcatggcatgctgaacacgatatcc 1179

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 1178 tctgctatgccataaggatttccagtcgtataaacccctgtagaaaaccagtcaccttc 1120



to top

>emb|AJ512372.1|PPA512372 Paspalum paniculatum partial mRNA for NADP-dependant malate
            dehydrogenase (nadp-mdh gene)
          Length = 1052

 Score =  220 bits (111), Expect = 3e-54
 Identities = 207/239 (86%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||||||||||||||||||| ||||| ||||| || |||||||||||| | |||||||| 
Sbjct: 1052 ggaagatcacaaaatgcattcccctctcctgtgaggtgggcaacacatttcttctcagca 993

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || ||||||||| |||||||| |||||  ||||||||||||||||||||  |||||| 
Sbjct: 992  agcaattcagcttcgctctttttaatccgttcccagagaaaatcgtccattagcacatcg 933

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||||||||| ||||| |||||||||||||| ||||| ||||| || || || 
Sbjct: 932  gtagctagttcatagtcaccatccccctttgatctgcatggcatgctgaacacaatgtcc 873

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
             || ||||||||||||||||||| |||||||||||||||| ||||||||| || |||||
Sbjct: 872  cctgctatgccataaggatttccagtcgtataaacccctgaagagaaccaatcgccttc 814



to top

>emb|AJ344432.1|SOF344432 Saccharum officinarum mRNA for NADP-dependent malate dehydrogenase
            (nadp-MDH gene)
          Length = 1388

 Score =  220 bits (111), Expect = 3e-54
 Identities = 207/239 (86%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||||||||||||||||||  ||||| ||||||||||||||| | ||| | |||||||| 
Sbjct: 1304 ggaagatcacaaaatgcatccccctctcctgtaagatgggcatcgcatttcttctcagca 1245

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || ||||| |||||||||||| |||||  |||||||||||||||||||||  ||||| 
Sbjct: 1244 agcaattcagtttcactctttttaatccgttcccagagaaaatcgtccattgatacatca 1185

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||| || || || || ||||| |||||||| ||||||||||| |||||||| 
Sbjct: 1184 gtagctagttcgtaatcaccgtcacccttcgatctgcatggcatactgaacacgatatcc 1125

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1124 tctgctatgccgtaaggatttccagtcgtataaacccctgtagagaaccagtcgccttc 1066



to top

>emb|AJ512376.1|TQU512376 Themeda quadrivalvis partial mRNA for NADP-dependant malate
            dehydrogenase (nadp-mdh gene)
          Length = 1248

 Score =  216 bits (109), Expect = 5e-53
 Identities = 202/233 (86%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||| ||||||  ||||||| ||||| ||||||||||||||||| ||| | |||||||| 
Sbjct: 1244 ggaacatcacagtatgcattcccctctcctgtaagatgggcaacgcatttcttctcagca 1185

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || |||||||||||||||||| |||||  ||||||||||||||||||||| |||||| 
Sbjct: 1184 agcaattcagcttcactctttttaatccgttcccagagaaaatcgtccattgacacatca 1125

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || | ||||| || || || || |||||||||||||| ||||| ||||| |||||||| 
Sbjct: 1124 gtagccagttcgtaatcaccgtcaccctttgatctgcatggcatgctgaacacgatatcc 1065

                                                                 
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtc 473
            ||| |||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 1064 tctgctatgccataaggacttccagtcgtataaacccctgtagagaaccagtc 1012



to top

>emb|AJ621580.1| Hyparrhenia rufa partial mRNA for NADP-dependant malate dehydrogenase
            (nadp-MDH gene)
          Length = 1056

 Score =  212 bits (107), Expect = 8e-52
 Identities = 206/239 (86%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||||||||||||||||||| ||||| ||||||||||| ||||||||| | |||||||| 
Sbjct: 1052 ggaagatcacaaaatgcattcccctctcctgtaagatgagcaacacatttcttctcagca 993

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | || |||||||||||||||||| |||    |||||||||||||||||| || |||||| 
Sbjct: 992  agcaattcagcttcactctttttaatcttttcccagagaaaatcgtccaatgacacatca 933

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||| || || || || ||||| |||||||| ||||| ||||| || ||||| 
Sbjct: 932  gtagctagttcgtaatcaccgtcacccttcgatctgcatggcatgctgaacacaatatcc 873

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 872  tctgctatgccataaggatttccagtcgtatacacccctgtagagaaccagtcgccttc 814



to top

>emb|AJ512368.1|DAR512368 Dichanthium aristatum partial mRNA for NADP-dependant malate
            dehydrogenase (nadp-mdh gene)
          Length = 1056

 Score =  212 bits (107), Expect = 8e-52
 Identities = 206/239 (86%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggaagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcg 300
            |||| ||||||| ||||||| ||||| ||||||||||||||||| ||| | |||||||| 
Sbjct: 1052 ggaacatcacaatatgcattcccctctcctgtaagatgggcaacgcatttcttctcagca 993

                                                                        
Query: 301  atcagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatct 360
            | ||  ||||||||||||||||| |||    |||||||||||||||||| || |||||| 
Sbjct: 992  agcaactcagcttcactctttttaatcttttcccagagaaaatcgtccaatgacacatca 933

                                                                        
Query: 361  ttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatca 420
             || ||||||| ||||| || || ||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 932  gtagctagttcgtagtcaccgtcacccttcgatctgcatggcatgctgaacacgatatcc 873

                                                                       
Query: 421  tctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 872  tctgctatgccataaggatttccagtcgtataaacccctgtagagaaccagtcgccttc 814



to top

>emb|AJ512371.1|PMA512371 Panicum maximum partial mRNA for NADP-dependant malate dehydrogenase
            (nadp-mdh gene)
          Length = 1269

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                        
Query: 246  atcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcgatcag 305
            ||||||||||||| | ||||| ||  |||||||| |||||||| | ||||| || | || 
Sbjct: 1260 atcacaaaatgcaatcccctctccaataagatggccaacacatttcttctcggcaagcaa 1201

                                                                        
Query: 306  ttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatctttaac 365
            ||||||||||||||||||||||||  |||| |||||||||||||||  ||||||  || |
Sbjct: 1200 ttcagcttcactctttttgatccgttcccacagaaaatcgtccattaacacatcagtagc 1141

                                                                        
Query: 366  tagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatcatctac 425
            |||||||||||| ||||| |||||||||||||| ||||||||||| ||||| || ||| |
Sbjct: 1140 tagttcatagtcaccatccccctttgatctgcatggcatactgaacacgatgtcctctgc 1081

                                                                  
Query: 426  tatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            |||||||||||||||||| || ||||||||||||| ||||||||| || |||||
Sbjct: 1080 tatgccataaggatttccagtagtataaacccctgaagagaaccaatcgccttc 1027



to top

>emb|AJ621581.1| Melinis repens partial mRNA for NADP-dependant malate dehydrogenase
            (nadp-MDH gene)
          Length = 1270

 Score =  208 bits (105), Expect = 1e-50
 Identities = 204/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 243  aagatcacaaaatgcattaccctcccctgtaagatgggcaacacatcttttctcagcgat 302
            ||||| |||||||||| | ||||| || |||||||||||||||||| | |||||||| | 
Sbjct: 1263 aagattacaaaatgcaatcccctctccggtaagatgggcaacacatttcttctcagcaag 1204

                                                                        
Query: 303  cagttcagcttcactctttttgatccggccccagagaaaatcgtccattgccacatcttt 362
            || ||||||||||||||||||||||||   ||| |||||||||||||||   |||||  |
Sbjct: 1203 caattcagcttcactctttttgatccgttgccacagaaaatcgtccattaagacatcagt 1144

                                                                        
Query: 363  aactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatcatc 422
            | ||||||||||||| ||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 1143 agctagttcatagtcaccatccccctttgatctgcatggcatactgaacacgatgtcctc 1084

                                                                     
Query: 423  tactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctccttc 479
            | ||||||||||||||||||| || ||||||||||| | ||||||||| || |||||
Sbjct: 1083 tgctatgccataaggatttccagtagtataaacccccgaagagaaccaatcgccttc 1027



to top

>emb|AJ306489.1|VPL306489 Vanilla planifolia partial mRNA for NADP-malate dehydrogenase (mdh1
           gene)
          Length = 498

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                       
Query: 369 ttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatcatctactat 428
           |||||||||||| |||||||||||||||||||||||||| || |||||||| ||  | ||
Sbjct: 498 ttcatagtcgccgtcgccctttgatctgcacggcatactaaagacgatatcctcggcaat 439

                          
Query: 429 gccataaggatttcc 443
           |||||||||||||||
Sbjct: 438 gccataaggatttcc 424



to top

>gb|AY725477.1| Lycopersicon esculentum chloroplast malate dehydrogenase (chMDH)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1293

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 185/232 (79%)
 Strand = Plus / Minus

                                                                        
Query: 212  acatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcccctg 271
            |||| |||||||| |||||||| || || || |||||||| |   || ||||||| ||||
Sbjct: 1291 acatttctccagggagcattgtgtctcctggcagatcacatataccaataccctctcctg 1232

                                                                        
Query: 272  taagatgggcaacacatcttttctcagcgatcagttcagcttcactctttttgatccggc 331
            ||||||| || |||||||| |||||||| | || |||| ||||   |||||| || ||||
Sbjct: 1231 taagatgcgcgacacatctcttctcagcaagcaattcatcttctgacttttttattcggc 1172

                                                                        
Query: 332  cccagagaaaatcgtccattgccacatctttaactagttcatagtcgccatcgccctttg 391
              | |||  | || ||||||   |||||||| || ||||||||||| ||||| || ||||
Sbjct: 1171 ttcggaggtagtcatccattaatacatctttgacaagttcatagtcaccatcaccttttg 1112

                                                                
Query: 392  atctgcacggcatactgaatacgatatcatctactatgccataaggatttcc 443
            ||||||| ||||| ||||| || ||||| | | |||| ||||||||||||||
Sbjct: 1111 atctgcatggcatgctgaaaactatatcctttgctatcccataaggatttcc 1060



to top

>emb|X54404.1|SVNADPMG S.vulgare NADH II gene for NADP-malate dehydrogenase
          Length = 4759

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                        
Query: 386  cctttgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccgg 445
            |||| |||||||| ||||| ||||| |||||||| ||| ||||||||||||||||||| |
Sbjct: 3788 ccttcgatctgcatggcatgctgaacacgatatcctctgctatgccataaggatttccag 3729

                       
Query: 446  tcgtataaacc 456
            |||||||||||
Sbjct: 3728 tcgtataaacc 3718



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 271  gtaagatgggcaacacatcttttctcagcgatcagttcagcttcactct 319
            |||||||||||||| ||| | |||||||| | || ||||||||||||||
Sbjct: 4068 gtaagatgggcaacgcatttcttctcagcaagcaattcagcttcactct 4020



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 318  ctttttgatccggccccagagaaaatcgtccattgccacatctttaactagttcatagtc 377
            |||||| |||||  |||| |||||||||||||||| ||||||  || ||||||| || ||
Sbjct: 3929 ctttttaatccgttcccacagaaaatcgtccattgacacatcagtagctagttcgtaatc 3870

                       
Query: 378  gccatcgccct 388
             ||||| ||||
Sbjct: 3869 accatcaccct 3859



to top

>gb|S55884.1| Sorghum bicolor NADP-malate dehydrogenase (NMDH II) gene, complete
            cds
          Length = 4759

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                        
Query: 386  cctttgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccgg 445
            |||| |||||||| ||||| ||||| |||||||| ||| ||||||||||||||||||| |
Sbjct: 3788 ccttcgatctgcatggcatgctgaacacgatatcctctgctatgccataaggatttccag 3729

                       
Query: 446  tcgtataaacc 456
            |||||||||||
Sbjct: 3728 tcgtataaacc 3718



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 271  gtaagatgggcaacacatcttttctcagcgatcagttcagcttcactct 319
            |||||||||||||| ||| | |||||||| | || ||||||||||||||
Sbjct: 4068 gtaagatgggcaacgcatttcttctcagcaagcaattcagcttcactct 4020



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 318  ctttttgatccggccccagagaaaatcgtccattgccacatctttaactagttcatagtc 377
            |||||| |||||  |||| |||||||||||||||| ||||||  || ||||||| || ||
Sbjct: 3929 ctttttaatccgttcccacagaaaatcgtccattgacacatcagtagctagttcgtaatc 3870

                       
Query: 378  gccatcgccct 388
             ||||| ||||
Sbjct: 3869 accatcaccct 3859



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                            
Query: 318      ctttttgatccggccccagagaaaatcgtccattgccacatctttaactagttcatagtc 377
                |||||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 28137058 cttttttatccgttcccagaggaaatcgtccattgccacatctttaactagttcgtagtc 28136999

                           
Query: 378      gccatcgccct 388
                 ||||| ||||
Sbjct: 28136998 accatcaccct 28136988



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                            
Query: 386      cctttgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccgg 445
                ||||||| ||||| ||||||||||| ||||| || ||| ||||||||||||||||||| |
Sbjct: 28136892 cctttgacctgcatggcatactgaacacgatgtcctctgctatgccataaggatttccag 28136833

                           
Query: 446      tcgtataaacc 456
                |||||||||||
Sbjct: 28136832 tcgtataaacc 28136822



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                 
Query: 271      gtaagatgggcaacacatcttttctcagcgatcagttcagcttcactct 319
                |||||||||||||| ||||||||||| |||| || ||||||||||||||
Sbjct: 28137204 gtaagatgggcaacgcatcttttctcggcgagcaattcagcttcactct 28137156



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 210      ctacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccct 265
                |||||| ||||| |||||||| || || || |||||||||||||||||||| ||||
Sbjct: 28137368 ctacatttctcctggaagcatggtgtctccgggaagatcacaaaatgcattgccct 28137313



to top

>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0604E01
          Length = 159049

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                          
Query: 318    ctttttgatccggccccagagaaaatcgtccattgccacatctttaactagttcatagtc 377
              |||||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 134553 cttttttatccgttcccagaggaaatcgtccattgccacatctttaactagttcgtagtc 134494

                         
Query: 378    gccatcgccct 388
               ||||| ||||
Sbjct: 134493 accatcaccct 134483



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                          
Query: 386    cctttgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccgg 445
              ||||||| ||||| ||||||||||| ||||| || ||| ||||||||||||||||||| |
Sbjct: 134387 cctttgacctgcatggcatactgaacacgatgtcctctgctatgccataaggatttccag 134328

                         
Query: 446    tcgtataaacc 456
              |||||||||||
Sbjct: 134327 tcgtataaacc 134317



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                               
Query: 271    gtaagatgggcaacacatcttttctcagcgatcagttcagcttcactct 319
              |||||||||||||| ||||||||||| |||| || ||||||||||||||
Sbjct: 134699 gtaagatgggcaacgcatcttttctcggcgagcaattcagcttcactct 134651



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                      
Query: 210    ctacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccct 265
              |||||| ||||| |||||||| || || || |||||||||||||||||||| ||||
Sbjct: 134863 ctacatttctcctggaagcatggtgtctccgggaagatcacaaaatgcattgccct 134808



to top

>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0543D10
          Length = 134866

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                         
Query: 318   ctttttgatccggccccagagaaaatcgtccattgccacatctttaactagttcatagtc 377
             |||||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 20531 cttttttatccgttcccagaggaaatcgtccattgccacatctttaactagttcgtagtc 20472

                        
Query: 378   gccatcgccct 388
              ||||| ||||
Sbjct: 20471 accatcaccct 20461



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                         
Query: 386   cctttgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccgg 445
             ||||||| ||||| ||||||||||| ||||| || ||| ||||||||||||||||||| |
Sbjct: 20365 cctttgacctgcatggcatactgaacacgatgtcctctgctatgccataaggatttccag 20306

                        
Query: 446   tcgtataaacc 456
             |||||||||||
Sbjct: 20305 tcgtataaacc 20295



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                              
Query: 271   gtaagatgggcaacacatcttttctcagcgatcagttcagcttcactct 319
             |||||||||||||| ||||||||||| |||| || ||||||||||||||
Sbjct: 20677 gtaagatgggcaacgcatcttttctcggcgagcaattcagcttcactct 20629



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 210   ctacatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccct 265
             |||||| ||||| |||||||| || || || |||||||||||||||||||| ||||
Sbjct: 20841 ctacatttctcctggaagcatggtgtctccgggaagatcacaaaatgcattgccct 20786



to top

>gb|M31965.1|SRGMDH S.vulgare NADP malate dehydrogenase gene, complete cds
          Length = 4638

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                        
Query: 386  cctttgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccgg 445
            |||| |||||||| ||||| ||||| |||||||| ||| ||||||||||||||||||| |
Sbjct: 3372 ccttcgatctgcatggcatgctgaacacgatatcctctgctatgccataaggatttccag 3313

                       
Query: 446  tcgtataaacc 456
            |||||||||||
Sbjct: 3312 tcgtataaacc 3302



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 318  ctttttgatccggccccagagaaaatcgtccattgccacatctttaactagttcatagtc 377
            |||||| |||||  ||||||||||||||||||||| ||||||  || ||||||| || ||
Sbjct: 3524 ctttttaatccgttcccagagaaaatcgtccattgacacatcagtagctagttcgtaatc 3465

                       
Query: 378  gccatcgccct 388
             ||||| ||||
Sbjct: 3464 accatcaccct 3454



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 271  gtaagatgggcaacacatcttttctcagcgatcagttcagcttcactct 319
            |||||||||||||| ||| | |||||||| | || ||||||||||||||
Sbjct: 3665 gtaagatgggcaacgcatttcttctcagcaagcaattcagcttcactct 3617



to top

>gb|BT013888.1| Lycopersicon esculentum clone 132873F, mRNA sequence
          Length = 1512

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                        
Query: 212  acatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcccctg 271
            |||||||||| |||||||| ||||| || || |||||||| |  ||  ||||||| ||||
Sbjct: 1327 acatctctccgggaagcatcgtatctccggggagatcacagaccgcgataccctctcctg 1268

                                          
Query: 272  taagatgggcaacacatcttttctcagcga 301
            ||||||||||||||||||||||||| ||||
Sbjct: 1267 taagatgggcaacacatcttttctccgcga 1238



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 101/122 (82%)
 Strand = Plus / Minus

                                                                        
Query: 358  tctttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgata 417
            ||||| ||||||||||| || ||||| || |||||||| || ||||||||||| || |||
Sbjct: 1181 tcttttactagttcataatcaccatctccttttgatctacaaggcatactgaaaactata 1122

                                                                        
Query: 418  tcatctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctcct 477
            || | | |||| ||||||||||||||  | ||||| || || ||||| ||||| ||||||
Sbjct: 1121 tcctgtgctattccataaggatttccatttgtatatactccagtagaaaaccaatctcct 1062

              
Query: 478  tc 479
            ||
Sbjct: 1061 tc 1060



to top

>emb|AJ849379.1| Lycopersicon esculentum mRNA for chloroplast malate dehydrogenase
            (mdh gene)
          Length = 1757

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                        
Query: 212  acatctctccaggaagcattgtatccccaggaagatcacaaaatgcattaccctcccctg 271
            |||||||||| |||||||| ||||| || || |||||||| |  ||  ||||||| ||||
Sbjct: 1521 acatctctccgggaagcatcgtatctccggggagatcacagaccgcgataccctctcctg 1462

                                          
Query: 272  taagatgggcaacacatcttttctcagcga 301
            ||||||||||||||||||||||||| ||||
Sbjct: 1461 taagatgggcaacacatcttttctccgcga 1432



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 101/122 (82%)
 Strand = Plus / Minus

                                                                        
Query: 358  tctttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaatacgata 417
            ||||| ||||||||||| || ||||| || |||||||| || ||||||||||| || |||
Sbjct: 1375 tcttttactagttcataatcaccatctccttttgatctacaaggcatactgaaaactata 1316

                                                                        
Query: 418  tcatctactatgccataaggatttccggtcgtataaacccctgtagagaaccagtctcct 477
            || | | |||| ||||||||||||||  | ||||| || || ||||| ||||| ||||||
Sbjct: 1315 tcctgtgctattccataaggatttccatttgtatatactccagtagaaaaccaatctcct 1256

              
Query: 478  tc 479
            ||
Sbjct: 1255 tc 1254



to top

>gb|AF020269.1|AF020269 Medicago sativa chloroplast malate dehydrogenase precursor (p1mdh)
            mRNA, nuclear gene encoding chloroplast protein, complete
            cds
          Length = 2050

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 367  agttcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatcatctact 426
            |||||||| || ||||| ||||||||||  |||||||||||||| || ||||| ||  ||
Sbjct: 1301 agttcataatcaccatctccctttgatcgacacggcatactgaaaacaatatcttcagct 1242

                                                        
Query: 427  atgccataaggatttccggtcgtataaacccctgtagagaacca 470
            || |||||||||||||| || ||||| || || ||||| |||||
Sbjct: 1241 attccataaggatttccagtggtatacacaccagtagaaaacca 1198



to top

>gb|L40958.2|FTRNADPMAL Flaveria bidentis NADP-malate dehydrogenase precursor, mRNA, complete
            cds; nuclear gene encoding chloroplast protein
          Length = 1560

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 210  ctacatctctccaggaagcattgtatccccaggaagatcacaaa 253
            |||||| ||||||||||||||||||||| | || ||||||||||
Sbjct: 1395 ctacatttctccaggaagcattgtatcctctggtagatcacaaa 1352



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 370  tcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatcatctactatg 429
            ||||| || ||||| ||||| |||||||| ||||| || || || ||||| ||| |||| 
Sbjct: 1235 tcataatcaccatcccccttagatctgcaaggcatgctaaaaacaatatcctctgctatt 1176

                       
Query: 430  ccataaggatt 440
            |||||||||||
Sbjct: 1175 ccataaggatt 1165



to top

>emb|X74507.1|PSMDH P.sativum mdh mRNA for chloroplast malate dehydrogenase (NADP+)
          Length = 1326

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 379  ccatcgccctttgatctgcacggcatactgaatacgatatcatctactatgccataagga 438
            ||||| ||||||||||| || ||||| ||||| |||||||| ||  |||| || ||||||
Sbjct: 1157 ccatctccctttgatctacatggcatgctgaacacgatatcttcagctattccgtaagga 1098

                                               
Query: 439  tttccggtcgtataaacccctgtagagaaccagtc 473
            |||||| | ||||| || || | ||| ||||||||
Sbjct: 1097 tttccgttggtatatacaccagaagaaaaccagtc 1063



to top

>emb|X63727.1|MCMDH1A M.crystallinum mRNA for NADP-malate dehydrogenase
          Length = 1747

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 353  ccacatctttaactagttcatagtcgccatcgccctttgatctgcacggcatactgaa 410
            ||||||| || || || ||||| || ||||| |||||||||||||| |||||||||||
Sbjct: 1255 ccacatccttgacaagctcataatcaccatctccctttgatctgcatggcatactgaa 1198



to top

>gb|U22533.1|FTU22533 Flaveria trinervia NADP-malate dehydrogenase mRNA, complete cds
          Length = 1583

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 210  ctacatctctccaggaagcattgtatccccaggaagatcacaaa 253
            |||||| ||||| ||||||||||||||| | || ||||||||||
Sbjct: 1374 ctacatttctccgggaagcattgtatcctctggtagatcacaaa 1331



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 370  tcatagtcgccatcgccctttgatctgcacggcatactgaatacgatatcatctactatg 429
            ||||| || ||||| ||||| |||||||| ||||| || || || ||||| ||| |||| 
Sbjct: 1214 tcataatcaccatcccccttagatctgcaaggcatgctaaaaacaatatcctctgctatt 1155

                       
Query: 430  ccataaggatt 440
            |||||||||||
Sbjct: 1154 ccataaggatt 1144



to top

>gb|AY994154.1| Glycine max flavanone 3-hydroxylase (F3H1) gene, F3H1-wp allele,
            complete cds; and transposon Tgm-Express1, complete
            sequence
          Length = 9219

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 386  cctttgatctgcacggcatactgaatacgatatcatctactatgccataaggatttccg 444
            ||||||||| ||| ||||||||||| || ||| | ||  |||| |||||||||||||||
Sbjct: 5211 cctttgatcggcatggcatactgaaaacaataccttcagctattccataaggatttccg 5153



to top

>emb|X84020.1|SOMRNAMDH S.oleracea mRNA for NADP-malate dehydrogenase
          Length = 1608

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 370  tcatagtcgccatcgccctttgatctgcacggcatact 407
            ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 1223 tcataatcaccatctccctttgatctgcaaggcatact 1186



to top

>ref|NM_179725.1| Arabidopsis thaliana ATCNGC14; calmodulin binding / cyclic nucleotide
            binding / ion channel AT2G24610 (ATCNGC14) mRNA, complete
            cds
          Length = 2398

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 134  actgtgatccttctaataata 154
            |||||||||||||||||||||
Sbjct: 1016 actgtgatccttctaataata 1036



to top

>ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosome 20
          Length = 477159

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 145    tctaataataacatgacatct 165
              |||||||||||||||||||||
Sbjct: 178154 tctaataataacatgacatct 178174



to top

>emb|Z83850.1|HS82J11 Human DNA sequence from clone RP1-82J11 on chromosome Xq22, complete
             sequence
          Length = 132981

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 6     tgctttatatattattagtgcacaa 30
             |||||||||||| ||||||||||||
Sbjct: 28834 tgctttatatataattagtgcacaa 28858



to top

>emb|AL591074.10| Human DNA sequence from clone XXyac-60D10 on chromosome 20 Contains the
             CST5 gene for cystatin D, the CST2 gene for cystatin SA,
             the CST1 gene for cystatin SN and the CSTP2 gene for
             cystatin pseudogene 2, complete sequence
          Length = 203076

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   tctaataataacatgacatct 165
             |||||||||||||||||||||
Sbjct: 28558 tctaataataacatgacatct 28538



to top

>gb|AC157645.8| Medicago truncatula clone mth2-70l21, complete sequence
          Length = 118562

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 50    taaatacacacaagataaata 70
             |||||||||||||||||||||
Sbjct: 19268 taaatacacacaagataaata 19248



to top

>gb|AC090630.10| Homo sapiens 12 BAC RP11-630C16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184140

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 454    acccctgtagagaaccagtct 474
              |||||||||||||||||||||
Sbjct: 133671 acccctgtagagaaccagtct 133651



to top

>gb|AC006954.8| Arabidopsis thaliana chromosome 2 clone F25P17 map mi238, complete
             sequence
          Length = 93701

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 134   actgtgatccttctaataata 154
             |||||||||||||||||||||
Sbjct: 46839 actgtgatccttctaataata 46819



to top

>emb|BX323008.5| Zebrafish DNA sequence from clone DKEY-29D16 in linkage group 1, complete
              sequence
          Length = 216850

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 143    cttctaataataacatgacat 163
              |||||||||||||||||||||
Sbjct: 182546 cttctaataataacatgacat 182526



to top

>gb|AC154633.2| Mus musculus BAC clone RP23-296I10 from chromosome 12, complete
            sequence
          Length = 216169

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 208  cactacatctctccaggaagc 228
            |||||||||||||||||||||
Sbjct: 2462 cactacatctctccaggaagc 2442



to top

>emb|BX908758.16| Zebrafish DNA sequence from clone DKEY-32G22 in linkage group 1,
            complete sequence
          Length = 35797

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 143  cttctaataataacatgacat 163
            |||||||||||||||||||||
Sbjct: 7167 cttctaataataacatgacat 7187



to top

>gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome 7, complete sequence
          Length = 215537

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   ttaccctcccctgtaagatg 278
             ||||||||||||||||||||
Sbjct: 43767 ttaccctcccctgtaagatg 43786



to top

>gb|AC149300.1| Populus trichocarpa clone Pop1-040E01, complete sequence
          Length = 124725

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 406  ctgaatacgatatcatctac 425
            ||||||||||||||||||||
Sbjct: 9120 ctgaatacgatatcatctac 9101



to top

>gb|AC149296.1| Populus trichocarpa clone Pop1-012O23, complete sequence
          Length = 123280

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   ctgaatacgatatcatctac 425
             ||||||||||||||||||||
Sbjct: 66558 ctgaatacgatatcatctac 66577



to top

>gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complete sequence
          Length = 175515

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    ttaccctcccctgtaagatg 278
              ||||||||||||||||||||
Sbjct: 130844 ttaccctcccctgtaagatg 130863



to top

>emb|AL590682.9| Human DNA sequence from clone RP11-435F13 on chromosome 1 Contains a
             heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)
             pseudogene, part of the RGS7 gene for regulator of
             G-protein signalling 7 and a ribosomal protein large P1
             (RPLP1) pseudogene, complete sequence
          Length = 155156

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   catgacatcttggtagcaat 175
             ||||||||||||||||||||
Sbjct: 47220 catgacatcttggtagcaat 47239



to top

>emb|AL513342.7| Human DNA sequence from clone RP11-96F14 on chromosome 1 Contains part
             of the FMN2 gene for formin 2, complete sequence
          Length = 127208

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   cagttcagcttcactctttt 322
             ||||||||||||||||||||
Sbjct: 96712 cagttcagcttcactctttt 96693



to top

>emb|AL139274.17| Human DNA sequence from clone RP11-393I2 on chromosome 6 Contains a
            reticulocalbin 1, EF-hand calcium binding domain (RCN1)
            pseudogene, a novel gene, a novel pseudogene, the gene
            for a novel zinc finger protein (C2H2 type) and 3 CpG
            islands, complete sequence
          Length = 163481

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  atcacaaaatgcattaccct 265
            ||||||||||||||||||||
Sbjct: 3247 atcacaaaatgcattaccct 3266



to top

>ref|XM_775488.1| PREDICTED: Strongylocentrotus purpuratus similar to
           Microtubule-associated protein 1A (MAP 1A) (LOC575071),
           mRNA
          Length = 6246

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 gccatcgccctttgatctgc 397
           ||||||||||||||||||||
Sbjct: 777 gccatcgccctttgatctgc 796



to top

>emb|X83924.1|SMSEL183 S.martensii mRNA NADP-dependent malate dehydrogenase (sel183)
          Length = 1448

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 364  actagttcatagtcgccatcgccctttgatctgcacggca 403
            |||| ||| ||||| ||||| |||||||||||||| ||||
Sbjct: 1237 actatttcgtagtctccatctccctttgatctgcatggca 1198



to top

>emb|X83925.1|SMSEL5 S.martensii mRNA NADP-dependent malate dehydrogenase (sel5)
          Length = 1359

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 364  actagttcatagtcgccatcgccctttgatctgcacggca 403
            |||| ||| ||||| ||||| |||||||||||||| ||||
Sbjct: 1176 actatttcgtagtctccatctccctttgatctgcatggca 1137



to top

>gb|AC079684.16| Homo sapiens 12 BAC RP11-351C21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 96000

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 46    ttattaaatacacacaagataaatagct 73
             ||||||||||||| || |||||||||||
Sbjct: 61070 ttattaaatacactcaggataaatagct 61097



to top

>gb|AC154028.7| Mus musculus 10 BAC RP23-246J13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206191

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ttttgctttatatattatta 22
              ||||||||||||||||||||
Sbjct: 116791 ttttgctttatatattatta 116772



to top

>gb|AC093729.2| Homo sapiens BAC clone RP11-11N6 from 4, complete sequence
          Length = 148616

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    atattattagtgcacaacaa 33
             ||||||||||||||||||||
Sbjct: 69127 atattattagtgcacaacaa 69108



to top

>gb|AC016674.9| Homo sapiens BAC clone RP11-36C8 from 2, complete sequence
          Length = 69948

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     tttgctttatatattattag 23
             ||||||||||||||||||||
Sbjct: 29623 tttgctttatatattattag 29642



to top

>emb|AJ605553.1| Solanum tuberosum mRNA for putrescine N-methyltransferase (pmt
           gene)
          Length = 1332

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 aataacatgacatcttggta 170
           ||||||||||||||||||||
Sbjct: 317 aataacatgacatcttggta 298



to top

>emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein, exons 1-12
          Length = 163455

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   ttaccctcccctgtaagatg 278
             ||||||||||||||||||||
Sbjct: 52864 ttaccctcccctgtaagatg 52883



to top

>emb|AL663052.8| Mouse DNA sequence from clone RP23-202N14 on chromosome X, complete
              sequence
          Length = 202972

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     ataaatagctgctgcagcct 83
              ||||||||||||||||||||
Sbjct: 194007 ataaatagctgctgcagcct 194026


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,697,830
Number of Sequences: 3902068
Number of extensions: 4697830
Number of successful extensions: 85306
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85151
Number of HSP's gapped (non-prelim): 152
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top