>ref|XM_473385.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1536

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 124/150 (82%)
 Strand = Plus / Minus

                                                                        
Query: 353  atcaaggacttgtactcttcgttctcagcacaccctctacttctgagtacactcattaac 412
            ||||| |||||||||||||| |||||  | |||| ||||||||| |||||| |||| |||
Sbjct: 1508 atcaatgacttgtactcttcattctcctcgcaccgtctacttctaagtacattcatcaac 1449

                                                                        
Query: 413  ctgtcgacactctccgtgtcattcttctccttgaaatatgccaggagagtctcaacattg 472
            |||||  | || || |  || || |||||||||||||  || |||||  |||||||||||
Sbjct: 1448 ctgtctgcgctttctgcatcgtttttctccttgaaattcgcaaggaggctctcaacattg 1389

                                          
Query: 473  gttggtcttggtctccatttacttgcactt 502
            || ||||||||||||||||| |||| ||||
Sbjct: 1388 gtgggtcttggtctccatttgcttggactt 1359

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 124/150 (82%)
 Strand = Plus / Plus

                                                                            
Query: 353      atcaaggacttgtactcttcgttctcagcacaccctctacttctgagtacactcattaac 412
                ||||| |||||||||||||| |||||  | |||| ||||||||| |||||| |||| |||
Sbjct: 27229964 atcaatgacttgtactcttcattctcctcgcaccgtctacttctaagtacattcatcaac 27230023

                                                                            
Query: 413      ctgtcgacactctccgtgtcattcttctccttgaaatatgccaggagagtctcaacattg 472
                |||||  | || || |  || || |||||||||||||  || |||||  |||||||||||
Sbjct: 27230024 ctgtctgcgctttctgcatcgtttttctccttgaaattcgcaaggaggctctcaacattg 27230083

                                              
Query: 473      gttggtcttggtctccatttacttgcactt 502
                || ||||||||||||||||| |||| ||||
Sbjct: 27230084 gtgggtcttggtctccatttgcttggactt 27230113

>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03,
             complete sequence
          Length = 136656

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 124/150 (82%)
 Strand = Plus / Plus

                                                                         
Query: 353   atcaaggacttgtactcttcgttctcagcacaccctctacttctgagtacactcattaac 412
             ||||| |||||||||||||| |||||  | |||| ||||||||| |||||| |||| |||
Sbjct: 61053 atcaatgacttgtactcttcattctcctcgcaccgtctacttctaagtacattcatcaac 61112

                                                                         
Query: 413   ctgtcgacactctccgtgtcattcttctccttgaaatatgccaggagagtctcaacattg 472
             |||||  | || || |  || || |||||||||||||  || |||||  |||||||||||
Sbjct: 61113 ctgtctgcgctttctgcatcgtttttctccttgaaattcgcaaggaggctctcaacattg 61172

                                           
Query: 473   gttggtcttggtctccatttacttgcactt 502
             || ||||||||||||||||| |||| ||||
Sbjct: 61173 gtgggtcttggtctccatttgcttggactt 61202

>emb|CT009512.6| Mouse DNA sequence from clone RP23-94B13 on chromosome 14, complete
              sequence
          Length = 232468

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 236    ttcttccaacattcagattacaagca 261
              ||||||||||||| ||||||||||||
Sbjct: 180396 ttcttccaacattgagattacaagca 180371

>ref|XM_744614.1| Aspergillus fumigatus Af293 mRNA capping enzyme subunit alpha
           (Afu2g05780) partial mRNA
          Length = 1248

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 436 cttctccttgaaatatgccag 456
           |||||||||||||||||||||
Sbjct: 504 cttctccttgaaatatgccag 484

>gb|AC125121.4| Mus musculus BAC clone RP24-267O4 from chromosome 6, complete sequence
          Length = 162573

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    tgatgatctgagaatttctaa 82
             |||||||||||||||||||||
Sbjct: 98303 tgatgatctgagaatttctaa 98323

>gb|AC117594.8| Mus musculus chromosome 3, clone RP23-335D16, complete sequence
          Length = 230457

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    acaactgagaaaatgcaccta 178
              |||||||||||||||||||||
Sbjct: 120526 acaactgagaaaatgcaccta 120506

>emb|BX276128.8| Zebrafish DNA sequence from clone CH211-215C18 in linkage group 5,
             complete sequence
          Length = 176461

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 428   gtgtcattcttctccttgaaa 448
             |||||||||||||||||||||
Sbjct: 22723 gtgtcattcttctccttgaaa 22743

>gb|DQ215405.1| Taeniopygia guttata clone 0063P0030B12 NADH-ubiquinone
           oxidoreductase variant 2-like mRNA, complete sequence
          Length = 1273

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 agggaaacaactgagaaaat 171
           ||||||||||||||||||||
Sbjct: 578 agggaaacaactgagaaaat 597

>gb|AC158953.8| Mus musculus chromosome 3, clone RP23-437C24, complete sequence
          Length = 204136

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     cagacagaaggcaggcagac 116
              ||||||||||||||||||||
Sbjct: 193850 cagacagaaggcaggcagac 193869

>gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosome 12, complete sequence
          Length = 150375

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    aacaactgagaaaatgcacc 176
              ||||||||||||||||||||
Sbjct: 106787 aacaactgagaaaatgcacc 106806

>emb|AL445217.3| Human DNA sequence from clone RP11-335G18 on chromosome 13 Contains the
             5' end of the EPSTI1 gene for epithelial stromal
             interaction 1 (breast) and the gene for a DNAJ
             domain-containing protein (MCJ), complete sequence
          Length = 161699

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    cctcctcttgatgatctgag 73
             ||||||||||||||||||||
Sbjct: 15949 cctcctcttgatgatctgag 15968

>gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome 12, complete sequence
          Length = 226483

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   aacaactgagaaaatgcacc 176
             ||||||||||||||||||||
Sbjct: 76447 aacaactgagaaaatgcacc 76466

>gb|AC078854.16| Homo sapiens 3q BAC RP11-480B17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 162313

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    aatcatatcattggtgtcca 311
              ||||||||||||||||||||
Sbjct: 156327 aatcatatcattggtgtcca 156346

>emb|CR354750.1| Mus musculus chromosome 6, clone tr151 strain 129/Sv, complete sequence
          Length = 167508

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   gctgtggaataaaaagaagt 201
             ||||||||||||||||||||
Sbjct: 52132 gctgtggaataaaaagaagt 52151

>emb|AL844603.5| Mouse DNA sequence from clone RP24-334I20 on chromosome 2, complete
             sequence
          Length = 144391

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   attttgtgtagggaaacaac 162
             ||||||||||||||||||||
Sbjct: 73541 attttgtgtagggaaacaac 73560

>gb|AC154704.2| Mus musculus BAC clone RP24-349I24 from chromosome 9, complete sequence
          Length = 188875

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 173   cacctaaacgctgtggaataaaaagaag 200
             |||||||||||| | |||||||||||||
Sbjct: 49866 cacctaaacgctctagaataaaaagaag 49839


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,486,244
Number of Sequences: 3902068
Number of extensions: 4486244
Number of successful extensions: 91061
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91001
Number of HSP's gapped (non-prelim): 60
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)