Clone Information

BLAST Search Result

Clone Name	rbags19p03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL31_NICGU (P46290) 60S ribosomal protein L31	156	5e-38
2	RL31_PERFR (Q9M573) 60S ribosomal protein L31	153	3e-37
3	RL312_ARATH (P51420) 60S ribosomal protein L31-2	152	7e-37
4	RL311_ARATH (Q9STR1) 60S ribosomal protein L31-1	149	6e-36
5	RL31_PANGI (Q9MAV7) 60S ribosomal protein L31	144	1e-34
6	RL31_PICMA (O65071) 60S ribosomal protein L31	144	1e-34
7	RL31_CHLRE (P45841) 60S ribosomal protein L31	115	7e-26
8	RL31_CYAPA (Q9XGL4) 60S ribosomal protein L31	106	4e-23
9	RL31_DROME (Q9V597) 60S ribosomal protein L31	102	8e-22
10	RL31_SPOFR (Q7KF90) 60S ribosomal protein L31	101	1e-21
11	RL31_HELVI (Q9GP16) 60S ribosomal protein L31	101	1e-21
12	RL31_DROVI (O18602) 60S ribosomal protein L31	100	2e-21
13	RL31_PAROL (Q9IA76) 60S ribosomal protein L31	99	7e-21
14	RL31_ICTPU (Q90YT7) 60S ribosomal protein L31	98	2e-20
15	RL31_RAT (P62902) 60S ribosomal protein L31	96	7e-20
16	RL31_PIG (P62901) 60S ribosomal protein L31	96	7e-20
17	RL31_MOUSE (P62900) 60S ribosomal protein L31	96	7e-20
18	RL31_HUMAN (P62899) 60S ribosomal protein L31	96	7e-20
19	RL31_XENLA (Q6NUH0) 60S ribosomal protein L31	95	2e-19
20	RL31_AEDAE (Q9GN74) 60S ribosomal protein L31	94	3e-19
21	RL31_ASHGO (Q757D7) 60S ribosomal protein L31	89	1e-17
22	RL31_YEAST (P04649) 60S ribosomal protein L31 (L34) (YL28)	89	1e-17
23	RL31_CANGA (Q6FWF4) 60S ribosomal protein L31	87	3e-17
24	RL31_CAEEL (Q9U332) 60S ribosomal protein L31	85	1e-16
25	RL31_SCHPO (Q9URX6) 60S ribosomal protein L31	73	5e-13
26	RL31_METKA (Q8TUY4) 50S ribosomal protein L31e	44	3e-04
27	RL31_METJA (P54009) 50S ribosomal protein L31e	44	3e-04
28	RL31_METMP (Q6M155) 50S ribosomal protein L31e	40	0.005
29	RL31_PYRFU (Q8U3S7) 50S ribosomal protein L31e	37	0.032
30	RL31_METTH (O27649) 50S ribosomal protein L31e	37	0.041
31	RL31_PYRAB (Q9UYI7) 50S ribosomal protein L31e	36	0.092
32	RL31_PYRHO (P58189) 50S ribosomal protein L31e	35	0.12
33	RL31_ARCFU (O28213) 50S ribosomal protein L31e	34	0.35
34	NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neur...	33	0.78
35	IF2C_PHAVU (P57997) Translation initiation factor IF-2, chloropl...	33	0.78
36	RL31_METAC (Q8TIN3) 50S ribosomal protein L31e	33	0.78
37	MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia p...	32	1.0
38	ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)	32	1.3
39	RL31_METMA (Q8PYQ4) 50S ribosomal protein L31e	32	1.3
40	SH3K1_MOUSE (Q8R550) SH3-domain kinase-binding protein 1 (SH3-co...	32	1.7
41	CPXM2_HUMAN (Q8N436) Carboxypeptidase-like protein X2 precursor	32	1.7
42	SH3K1_RAT (Q925Q9) SH3-domain kinase-binding protein 1 (SH3-cont...	31	2.3
43	RL31_AERPE (Q9YD25) 50S ribosomal protein L31e	31	3.0
44	YBOX1_HUMAN (P67809) Nuclease sensitive element-binding protein ...	31	3.0
45	YBOX1_BOVIN (P67808) Nuclease sensitive element-binding protein ...	31	3.0
46	ADA2A_PIG (P18871) Alpha-2A adrenergic receptor (Alpha-2A adreno...	31	3.0
47	YBOX1_RAT (P62961) Nuclease sensitive element-binding protein 1 ...	31	3.0
48	YBOX1_MOUSE (P62960) Nuclease sensitive element-binding protein ...	31	3.0
49	GDF6_BOVIN (P55106) Growth/differentiation factor 6 precursor (G...	31	3.0
50	THOC2_HUMAN (Q8NI27) THO complex subunit 2 (Tho2)	31	3.0
51	SH3K1_HUMAN (Q96B97) SH3-domain kinase-binding protein 1 (Cbl-in...	31	3.0
52	RL31_PYRAE (Q8ZTU2) 50S ribosomal protein L31e	30	3.9
53	SCG1_MOUSE (P16014) Secretogranin-1 precursor (Secretogranin I) ...	30	3.9
54	TOP2_ARATH (P30182) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoi...	30	3.9
55	ADA2A_CAVPO (Q60474) Alpha-2A adrenergic receptor (Alpha-2A adre...	30	3.9
56	PTH_SILPO (Q5LV91) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)	30	3.9
57	NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neur...	30	5.0
58	MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.4...	30	5.0
59	PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicas...	30	5.0
60	YBOX1_CHICK (Q06066) Nuclease sensitive element-binding protein ...	30	5.0
61	CHLD_TOBAC (O24133) Magnesium-chelatase subunit chlD, chloroplas...	30	6.6
62	GTR10_HUMAN (O95528) Solute carrier family 2, facilitated glucos...	30	6.6
63	ZN185_HUMAN (O15231) Zinc finger protein 185 (LIM-domain protein...	30	6.6
64	MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog) (SMA...	30	6.6
65	BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...	30	6.6
66	MKL2_MOUSE (P59759) MKL/myocardin-like protein 2 (Myocardin-rela...	30	6.6
67	YPRR_ECOLI (P03848) Hypothetical protein repA4	30	6.6
68	CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22	29	8.6
69	CNR1A_FUGRU (Q98894) Cannabinoid receptor type 1A	29	8.6
70	SYNG_RAT (Q9JKC9) AP1 gamma subunit-binding protein 1 (Gamma-syn...	29	8.6
71	CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)	29	8.6
72	PRGC1_MOUSE (O70343) Peroxisome proliferator-activated receptor ...	29	8.6
73	MAP1A_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A) ...	29	8.6
74	MA1B1_HUMAN (Q9UKM7) Endoplasmic reticulum mannosyl-oligosacchar...	29	8.6
75	PRGC1_RAT (Q9QYK2) Peroxisome proliferator-activated receptor ga...	29	8.6
76	NFM_CHICK (P16053) Neurofilament triplet M protein (160 kDa neur...	29	8.6

>RL31_NICGU (P46290) 60S ribosomal protein L31|
          Length = 120

 Score =  156 bits (394), Expect = 5e-38
 Identities = 82/123 (66%), Positives = 93/123 (75%)
 Frame = -1

Query: 522 MSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRID 343
           MS+K +    RK+EVVTREYT+NL +     TFKKKAP AIKEIRKFAQKAMGT DVR+D
Sbjct: 1   MSDKTKG---RKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVD 57

Query: 342 VKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVE 163
           VKLNK IWS GI              RND+EDAKEELYSLVTVAE+P +GLKGLGTK++E
Sbjct: 58  VKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIE 117

Query: 162 DED 154
           DED
Sbjct: 118 DED 120

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>RL31_PERFR (Q9M573) 60S ribosomal protein L31|
          Length = 121

 Score =  153 bits (387), Expect = 3e-37
 Identities = 77/114 (67%), Positives = 90/114 (78%)
 Frame = -1

Query: 495 PRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWS 316
           PRK+EVV+REYT+NL +     TFKKKAP AIKEIRKFAQKAMGT DVR+DVKLNKHIWS
Sbjct: 8   PRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWS 67

Query: 315 SGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 154
            GI              RND+EDAKEELYSLVTVAE+P+ GLKGLGT+V+++E+
Sbjct: 68  RGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121

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>RL312_ARATH (P51420) 60S ribosomal protein L31-2|
          Length = 119

 Score =  152 bits (384), Expect = 7e-37
 Identities = 80/123 (65%), Positives = 92/123 (74%)
 Frame = -1

Query: 522 MSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRID 343
           MSEKK     RK+EV+TREYT+NL +   + TFKKKAP AIKEIRKFA+KAMGT DVR+D
Sbjct: 1   MSEKKG----RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56

Query: 342 VKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVE 163
           VKLNK IWS GI              RND+EDAKEE +SLVTVAE+P EGL GLGTKV+E
Sbjct: 57  VKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIE 116

Query: 162 DED 154
           +ED
Sbjct: 117 EED 119

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>RL311_ARATH (Q9STR1) 60S ribosomal protein L31-1|
          Length = 119

 Score =  149 bits (376), Expect = 6e-36
 Identities = 79/123 (64%), Positives = 90/123 (73%)
 Frame = -1

Query: 522 MSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRID 343
           MSEKK     RK+EVVTREYT+NL +     TFKKKAP AIKEIRKFA+K MGT DVR+D
Sbjct: 1   MSEKKG----RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVD 56

Query: 342 VKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVE 163
           VKLNK IWS GI              RND+EDAKEE +SLVTVAE+P EGL GLGTK++E
Sbjct: 57  VKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIE 116

Query: 162 DED 154
           +ED
Sbjct: 117 EED 119

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>RL31_PANGI (Q9MAV7) 60S ribosomal protein L31|
          Length = 121

 Score =  144 bits (364), Expect = 1e-34
 Identities = 74/113 (65%), Positives = 86/113 (76%)
 Frame = -1

Query: 492 RKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 313
           RK+EVVTREYT+NL +     TFKKKAPNAIKEIRKFAQKAMGT DVR+DVKLNK IWS 
Sbjct: 8   RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSR 67

Query: 312 GIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 154
           GI              RND+EDAKEELYSLVTVA++P   LKGLG +++E++D
Sbjct: 68  GIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

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>RL31_PICMA (O65071) 60S ribosomal protein L31|
          Length = 120

 Score =  144 bits (364), Expect = 1e-34
 Identities = 73/113 (64%), Positives = 85/113 (75%)
 Frame = -1

Query: 492 RKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 313
           R++EV TREYT+NL +     TFKK AP A+KEIRKFAQKAMGT DVR+DVKLNK +WS 
Sbjct: 8   RRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNKAVWSR 67

Query: 312 GIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 154
           GI              RNDEEDAK+ELYS+VTVAEVP EGL GLGTK++E+ED
Sbjct: 68  GIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 120

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>RL31_CHLRE (P45841) 60S ribosomal protein L31|
          Length = 116

 Score =  115 bits (289), Expect = 7e-26
 Identities = 62/111 (55%), Positives = 75/111 (67%)
 Frame = -1

Query: 492 RKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 313
           R  E VTREYT++L +   + +FKK AP A+KEIRKFA K MGT+DVR+DVKLNK +WS 
Sbjct: 7   RSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVWSK 66

Query: 312 GIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVED 160
           GI              RND+EDAKEE+YS VTVAE   +  KG GT VV+D
Sbjct: 67  GIKNVPTRLRIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVVVQD 115

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>RL31_CYAPA (Q9XGL4) 60S ribosomal protein L31|
          Length = 119

 Score =  106 bits (265), Expect = 4e-23
 Identities = 60/125 (48%), Positives = 78/125 (62%)
 Frame = -1

Query: 531 PSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDV 352
           P   ++K RA      E+VTREYT+NL +    + FKK+AP A+KEI+KFA K MGT DV
Sbjct: 2   PKAENKKSRAA-----EIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDV 56

Query: 351 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTK 172
           R+D +LNK +W+ GI              RND+EDAKE+LY+LVT   VP    KGL T+
Sbjct: 57  RVDPRLNKFVWNQGIRSVPYRVRVRLARKRNDDEDAKEKLYTLVTY--VPVTSFKGLQTQ 114

Query: 171 VVEDE 157
            V+ E
Sbjct: 115 NVDAE 119

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>RL31_DROME (Q9V597) 60S ribosomal protein L31|
          Length = 124

 Score =  102 bits (254), Expect = 8e-22
 Identities = 56/111 (50%), Positives = 70/111 (63%)
 Frame = -1

Query: 486 DEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           +EVVTRE T++L +    + FKK+AP AIKEIRKFA++ MGT DVRID +LNKHIWS GI
Sbjct: 15  NEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGI 74

Query: 306 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 154
                         RND+ED+  +LY+ VT   VP    K L T+ VE  D
Sbjct: 75  RSTPFRIRVRLARRRNDDEDSPNKLYTYVTY--VPVSTFKNLQTENVESSD 123

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>RL31_SPOFR (Q7KF90) 60S ribosomal protein L31|
          Length = 124

 Score =  101 bits (252), Expect = 1e-21
 Identities = 55/108 (50%), Positives = 72/108 (66%)
 Frame = -1

Query: 486 DEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           +EVVTREYTVNL +    + FKK+AP AIKEIRKFA+K MGT DVR+D +LNK +WS G+
Sbjct: 15  NEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGV 74

Query: 306 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVE 163
                         RND+ED+  +L++LVT   VP   +KGL T+ V+
Sbjct: 75  RNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 120

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>RL31_HELVI (Q9GP16) 60S ribosomal protein L31|
          Length = 124

 Score =  101 bits (252), Expect = 1e-21
 Identities = 55/108 (50%), Positives = 72/108 (66%)
 Frame = -1

Query: 486 DEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           +EVVTREYTVNL +    + FKK+AP AIKEIRKFA+K MGT DVR+D +LNK +WS G+
Sbjct: 15  NEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGV 74

Query: 306 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVE 163
                         RND+ED+  +L++LVT   VP   +KGL T+ V+
Sbjct: 75  RNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 120

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>RL31_DROVI (O18602) 60S ribosomal protein L31|
          Length = 128

 Score =  100 bits (250), Expect = 2e-21
 Identities = 57/115 (49%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
 Frame = -1

Query: 486 DEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           +EVVTRE T++L +    + FKK+AP AIKEIRKF ++ MGTNDVRID +LNKHIWS GI
Sbjct: 15  NEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFTEREMGTNDVRIDTRLNKHIWSKGI 74

Query: 306 XXXXXXX----XXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 154
                             RND+ED+  +LY+LVT   VP    K L T+ VE  D
Sbjct: 75  SLRYRSTPFRVRVRLARRRNDDEDSPNKLYTLVTYVPVPT--FKNLQTENVESSD 127

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>RL31_PAROL (Q9IA76) 60S ribosomal protein L31|
          Length = 124

 Score = 99.4 bits (246), Expect = 7e-21
 Identities = 58/124 (46%), Positives = 77/124 (62%)
 Frame = -1

Query: 531 PSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDV 352
           P++  EKK+      +EVVTREYT+N+ +    + FKK+AP AIKEIRKFA K MGT DV
Sbjct: 3   PTKKGEKKKGRSAI-NEVVTREYTINVHKRIHGVGFKKRAPRAIKEIRKFAVKEMGTPDV 61

Query: 351 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTK 172
           RID +LNK +WS G+              RN++ED+  +LY+LVT   VP    KGL T 
Sbjct: 62  RIDTRLNKAVWSKGVRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTCKGLQTV 119

Query: 171 VVED 160
            V++
Sbjct: 120 NVDE 123

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>RL31_ICTPU (Q90YT7) 60S ribosomal protein L31|
          Length = 125

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 55/124 (44%), Positives = 76/124 (61%)
 Frame = -1

Query: 531 PSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDV 352
           P +   +K+      +EVVTREYT+N+ +    ++FKK+AP AIKEIRKFA K MGT DV
Sbjct: 3   PLKKGGEKKKGRSAINEVVTREYTINVHKRIHGISFKKRAPRAIKEIRKFAMKEMGTPDV 62

Query: 351 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTK 172
           RID +LNK +W+ G+              RN++ED+  +LY+LVT   VP    KGL T 
Sbjct: 63  RIDTRLNKAVWAKGVRNVPYRMRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTYKGLQTV 120

Query: 171 VVED 160
            V++
Sbjct: 121 NVDE 124

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>RL31_RAT (P62902) 60S ribosomal protein L31|
          Length = 125

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 54/124 (43%), Positives = 75/124 (60%)
 Frame = -1

Query: 531 PSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDV 352
           P++   +K+      +EVVTREYT+N+ +    + FKK+AP A+KEIRKFA K MGT DV
Sbjct: 3   PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDV 62

Query: 351 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTK 172
           RID +LNK +W+ GI              RN++ED+  +LY+LVT   VP    K L T 
Sbjct: 63  RIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTV 120

Query: 171 VVED 160
            V++
Sbjct: 121 NVDE 124

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>RL31_PIG (P62901) 60S ribosomal protein L31|
          Length = 125

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 54/124 (43%), Positives = 75/124 (60%)
 Frame = -1

Query: 531 PSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDV 352
           P++   +K+      +EVVTREYT+N+ +    + FKK+AP A+KEIRKFA K MGT DV
Sbjct: 3   PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDV 62

Query: 351 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTK 172
           RID +LNK +W+ GI              RN++ED+  +LY+LVT   VP    K L T 
Sbjct: 63  RIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTV 120

Query: 171 VVED 160
            V++
Sbjct: 121 NVDE 124

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>RL31_MOUSE (P62900) 60S ribosomal protein L31|
          Length = 125

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 54/124 (43%), Positives = 75/124 (60%)
 Frame = -1

Query: 531 PSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDV 352
           P++   +K+      +EVVTREYT+N+ +    + FKK+AP A+KEIRKFA K MGT DV
Sbjct: 3   PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDV 62

Query: 351 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTK 172
           RID +LNK +W+ GI              RN++ED+  +LY+LVT   VP    K L T 
Sbjct: 63  RIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTV 120

Query: 171 VVED 160
            V++
Sbjct: 121 NVDE 124

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>RL31_HUMAN (P62899) 60S ribosomal protein L31|
          Length = 125

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 54/124 (43%), Positives = 75/124 (60%)
 Frame = -1

Query: 531 PSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDV 352
           P++   +K+      +EVVTREYT+N+ +    + FKK+AP A+KEIRKFA K MGT DV
Sbjct: 3   PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDV 62

Query: 351 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTK 172
           RID +LNK +W+ GI              RN++ED+  +LY+LVT   VP    K L T 
Sbjct: 63  RIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTTFKNLQTV 120

Query: 171 VVED 160
            V++
Sbjct: 121 NVDE 124

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>RL31_XENLA (Q6NUH0) 60S ribosomal protein L31|
          Length = 125

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 54/124 (43%), Positives = 75/124 (60%)
 Frame = -1

Query: 531 PSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDV 352
           P++   +K+      +EVVTREYT+N+ +    + FKK+AP A+KEIRKFA K M T DV
Sbjct: 3   PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGIGFKKRAPRALKEIRKFAVKEMRTPDV 62

Query: 351 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTK 172
           RID +LNK +W+ GI              RN++ED+  +LY+LVT   VP    KGL T 
Sbjct: 63  RIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTY--VPVTNYKGLQTV 120

Query: 171 VVED 160
            V++
Sbjct: 121 NVDE 124

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>RL31_AEDAE (Q9GN74) 60S ribosomal protein L31|
          Length = 124

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 52/111 (46%), Positives = 70/111 (63%)
 Frame = -1

Query: 486 DEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           +EVVTRE T+NL +   ++ +KK+AP A+K +RKFA+K MGTNDVRID +LNK +W  GI
Sbjct: 15  NEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDTRLNKALWHRGI 74

Query: 306 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 154
                         RND+ED+  +LY+LVT   VP    K L T+ VE  +
Sbjct: 75  RNPPFRIRVRLSRRRNDDEDSPNKLYTLVTY--VPVSTFKELQTENVESTE 123

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>RL31_ASHGO (Q757D7) 60S ribosomal protein L31|
          Length = 114

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 50/110 (45%), Positives = 66/110 (60%)
 Frame = -1

Query: 483 EVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGIX 304
           +VVTREYT+NL +    +TFKK+AP A+KEI+KFA+  MGT DVR+D +LN  IW  G+ 
Sbjct: 6   DVVTREYTINLHKRLHGVTFKKRAPRAVKEIKKFAKLHMGTEDVRLDPRLNTEIWKRGVK 65

Query: 303 XXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 154
                        RN+E+ A   L+S V    V     KGL T VVE+E+
Sbjct: 66  GVPFRMRLRISRRRNEEDTAPPPLFSYVEPVVV--ASAKGLHTVVVEEEE 113

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>RL31_YEAST (P04649) 60S ribosomal protein L31 (L34) (YL28)|
          Length = 112

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 50/109 (45%), Positives = 68/109 (62%)
 Frame = -1

Query: 483 EVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGIX 304
           +VVTREYT+NL +    ++FKK+AP A+KEI+KFA+  MGT+DVR+  +LN+ IW  G+ 
Sbjct: 5   DVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRGVK 64

Query: 303 XXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDE 157
                        RN+EEDAK  L+S V    V     KGL T VVE++
Sbjct: 65  GVEYRLRLRISRKRNEEEDAKNPLFSYVEPVLV--ASAKGLQTVVVEED 111

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>RL31_CANGA (Q6FWF4) 60S ribosomal protein L31|
          Length = 113

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 48/109 (44%), Positives = 67/109 (61%)
 Frame = -1

Query: 483 EVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGIX 304
           +VVTREYT+N+ +    ++FKK+AP A+KEI+KFA+  MGT DVR+  +LN+ IW  G+ 
Sbjct: 6   DVVTREYTINMHKRLHGVSFKKRAPKAVKEIKKFAKLHMGTEDVRLAPELNQEIWKRGVK 65

Query: 303 XXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDE 157
                        RN+EE+AK  L+S V    V     KGL T VVE++
Sbjct: 66  GVAFRLRLRISRKRNEEENAKNPLFSYVEPVFV--ASAKGLQTTVVEED 112

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>RL31_CAEEL (Q9U332) 60S ribosomal protein L31|
          Length = 122

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 49/111 (44%), Positives = 66/111 (59%)
 Frame = -1

Query: 486 DEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           +EVVTREYT+++      +  KK+AP AI EI+KFA+  M TNDVR+D KLNK IWS GI
Sbjct: 14  NEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNKFIWSKGI 73

Query: 306 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 154
                         RN++ED+ ++LY+L T   VP     GL    V+ E+
Sbjct: 74  KNVPYRVRVRLSRRRNEDEDSAQKLYTLCTY--VPCTNFHGLTNVNVDSEE 122

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>RL31_SCHPO (Q9URX6) 60S ribosomal protein L31|
          Length = 113

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 43/109 (39%), Positives = 64/109 (58%)
 Frame = -1

Query: 486 DEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           ++VVTR+YT+++ +    ++FKK+AP AIKEI  FAQK M T +VR+D  LNK +W  GI
Sbjct: 10  NQVVTRDYTIHMHKRLYGVSFKKRAPRAIKEIVAFAQKHMQTKEVRVDPSLNKEVWKRGI 69

Query: 306 XXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVED 160
                         R+DE+D  + LY+ V   +V    ++   T VVE+
Sbjct: 70  RNVPHRLRLRLSRKRSDEDD--KALYTYVQAVDVANPKME---TTVVEE 113

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>RL31_METKA (Q8TUY4) 50S ribosomal protein L31e|
          Length = 86

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 23/55 (41%), Positives = 33/55 (60%)
 Frame = -1

Query: 471 REYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           R YTV L  A  +   KK+AP A+K +R+F ++ M   +VRI   +N+ IW  GI
Sbjct: 8   RVYTVPLRDAK-KAPLKKRAPRAVKALRQFIERHMKAEEVRIGNDVNEKIWERGI 61

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>RL31_METJA (P54009) 50S ribosomal protein L31e|
          Length = 87

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 22/55 (40%), Positives = 33/55 (60%)
 Frame = -1

Query: 471 REYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           R YT+ L     +    K+AP AIK+I++F ++ M    V+ID +LN+ IW  GI
Sbjct: 9   RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGI 63

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>RL31_METMP (Q6M155) 50S ribosomal protein L31e|
          Length = 83

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = -1

Query: 471 REYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           R YT+ L     +    K+AP AI+ IR+F +K M ++ V++D  +N+ +W   +
Sbjct: 5   RIYTIPLRDVTNKSPTTKRAPRAIRAIREFLKKHMKSDIVKLDNTINEKVWERSL 59

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>RL31_PYRFU (Q8U3S7) 50S ribosomal protein L31e|
          Length = 95

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -1

Query: 420 KKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           K+AP A+K +R+F  +     +V ID K+N+ IW  GI
Sbjct: 26  KRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGI 63

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>RL31_METTH (O27649) 50S ribosomal protein L31e|
          Length = 81

 Score = 37.0 bits (84), Expect = 0.041
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -1

Query: 417 KAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           +AP A+K +R+F  K M  + V++D  +N+ +W  GI
Sbjct: 20  RAPKAVKIVREFLMKHMKADTVKLDESINEKLWERGI 56

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>RL31_PYRAB (Q9UYI7) 50S ribosomal protein L31e|
          Length = 94

 Score = 35.8 bits (81), Expect = 0.092
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -1

Query: 420 KKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           K+AP A+K +R+F  +     +V I  K+N+ IW  GI
Sbjct: 26  KRAPRAVKFVREFVARHAKAQEVIISTKVNEKIWERGI 63

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>RL31_PYRHO (P58189) 50S ribosomal protein L31e|
          Length = 95

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -1

Query: 420 KKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 307
           K+AP A+K +R+F  +     +V I  K+N+ IW  GI
Sbjct: 27  KRAPRAVKFVREFIARHAKAQEVIISTKVNEKIWERGI 64

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>RL31_ARCFU (O28213) 50S ribosomal protein L31e|
          Length = 88

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -1

Query: 480 VVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTN--DVRIDVKLNKHIWSSG 310
           VV R Y++ L     R     +A  A K +RKF  + M     +V+ID  +N+ IW  G
Sbjct: 5   VVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWERG 63

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>NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neurofilament|
           protein) (Neurofilament medium polypeptide) (NF-M)
           (Neurofilament 3)
          Length = 915

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -1

Query: 573 QPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTV 457
           + P + + E+ E +P ++ EKK+A  P K+E V    T+
Sbjct: 710 EAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTI 748



 Score = 30.0 bits (66), Expect = 5.0
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = -1

Query: 579 SPQPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAI 400
           SP   +K + E G+    E  EK+    P++++V  +E      + P  +  KKKA + +
Sbjct: 684 SPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKE------EKPKDVPEKKKAESPV 737

Query: 399 KE 394
           KE
Sbjct: 738 KE 739

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>IF2C_PHAVU (P57997) Translation initiation factor IF-2, chloroplast precursor|
           (PvIF2cp)
          Length = 1012

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = -1

Query: 579 SPQPPSKPR----EEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKA 412
           +PQPPSKP+    ++  + +P+ +S+   AP P K  VV R+      +     + K K 
Sbjct: 239 APQPPSKPQPLKPQQPSKPQPALLSKPSIAPPPVKKPVVLRD------KGAAETSVKSKE 292

Query: 411 PNAIKEIRKFAQK 373
             +   I KFA K
Sbjct: 293 KKSPILIDKFASK 305

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>RL31_METAC (Q8TIN3) 50S ribosomal protein L31e|
          Length = 89

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = -1

Query: 486 DEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRI--DVKLNKHIWSS 313
           D V  + YT+ L +   ++   K+A  A+ E+R F  + M T  V++  D  +N+H+W  
Sbjct: 4   DMVKEQIYTIPLREVR-KVPAWKRANRAVIEVRGFLVRHMKTESVQVKLDKSINEHLWEK 62

Query: 312 G 310
           G
Sbjct: 63  G 63

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>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3|
           homolog (Histone-lysine N-methyltransferase, H3 lysine-4
           specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 576 PQPPSKPREEQGERRPSEMSEKKRAPG-PRKD 484
           PQPP  P EE G   PS  +  KR  G PRKD
Sbjct: 12  PQPPPPPPEEPGAPAPSPAAADKRPRGRPRKD 43

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>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)|
          Length = 2469

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 13/66 (19%)
 Frame = -1

Query: 576  PQPPSKPREEQGERRPSEMSEKKRAPGPR---------KDEVVTREYTVN----LPQAPP 436
            P+P ++ ++ +G+R P   S K+RAPG R         +D ++ +E  V+    + Q  P
Sbjct: 2118 PRPGARGQDAEGKRAPLVFSGKRRAPGARGRCAPDHFQEDHLLQKEKEVSSSHMVSQGGP 2177

Query: 435  RMTFKK 418
            R  F K
Sbjct: 2178 RGAFHK 2183

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>RL31_METMA (Q8PYQ4) 50S ribosomal protein L31e|
          Length = 93

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
 Frame = -1

Query: 498 GPRKDEVVTRE-YTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGT--NDVRIDVKLNK 328
           G   D++V  + YT+ L +   ++   K+A  A+KE+R F  + M T    V++D  +N+
Sbjct: 3   GKMADDMVKEQIYTIPLREVR-KVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61

Query: 327 HIWSSG 310
            +W  G
Sbjct: 62  CLWEKG 67

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>SH3K1_MOUSE (Q8R550) SH3-domain kinase-binding protein 1 (SH3-containing,|
           expressed in tumorigenic astrocytes) (Regulator of
           ubiquitous kinase) (Ruk)
          Length = 709

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = -1

Query: 576 PQPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAI 400
           P PPS P  +QG        E K+ P  R + +  R      P+  P++  +K +  AI
Sbjct: 384 PPPPSAPVVKQGAGTTERKHEIKKIPPERPETLPNRTEEKERPEREPKLDLQKPSVPAI 442

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>CPXM2_HUMAN (Q8N436) Carboxypeptidase-like protein X2 precursor|
          Length = 756

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 28/81 (34%), Positives = 33/81 (40%)
 Frame = -1

Query: 579 SPQPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAI 400
           SP  P+ P EE  ERRP E    KRA  P+K     RE +   P+ PP      K     
Sbjct: 58  SPPLPAGPGEEW-ERRPQEPRPPKRATKPKK--APKREKSA--PEPPPPGKHSNKKVMRT 112

Query: 399 KEIRKFAQKAMGTNDVRIDVK 337
           K   K A         R DV+
Sbjct: 113 KSSEKAANDDHSVRVAREDVR 133

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>SH3K1_RAT (Q925Q9) SH3-domain kinase-binding protein 1 (SH3-containing,|
           expressed in tumorigenic astrocytes) (Regulator of
           ubiquitous kinase) (Ruk)
          Length = 709

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = -1

Query: 576 PQPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAI 400
           P PPS P  +QG        E K+ P  R + +  R      P+  P++  +K +  AI
Sbjct: 384 PPPPSAPVIKQGAGTTERKHEIKKIPPERPETLPNRTEEKERPEREPKLDLQKPSVPAI 442

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>RL31_AERPE (Q9YD25) 50S ribosomal protein L31e|
          Length = 105

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 12/35 (34%), Positives = 24/35 (68%)
 Frame = -1

Query: 420 KKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWS 316
           ++A  A++ +R+F ++    ++V ID +LN +IWS
Sbjct: 24  RRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWS 58

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>YBOX1_HUMAN (P67809) Nuclease sensitive element-binding protein 1|
           (Y-box-binding protein 1) (Y-box transcription factor)
           (YB-1) (CCAAT-binding transcription factor I subunit A)
           (CBF-A) (Enhancer factor I subunit A) (EFI-A)
           (DNA-binding protein B) (DBPB)
          Length = 323

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
 Frame = -3

Query: 517 GEEARP-RPSQGRGGDPRVHRQPPTSASTDDLQEEGTKCHQGDQEVCPEGHGNK*CPHRR 341
           GE+ RP R +  RG  PR  R PP      +   E  K +QGD     E  G +  P RR
Sbjct: 226 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGD-----ETQGQQ-PPQRR 279

Query: 340 *AQQAHLEQRHQECP-----EESPCQDCPQE 263
             +  +  +R  E P     +E+   D P E
Sbjct: 280 YRRNFNYRRRRPENPKPQDGKETKAADPPAE 310

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>YBOX1_BOVIN (P67808) Nuclease sensitive element-binding protein 1|
           (Y-box-binding protein 1) (Y-box transcription factor)
           (YB-1) (CCAAT-binding transcription factor I subunit A)
           (CBF-A) (Enhancer factor I subunit A) (EFI-A)
           (DNA-binding protein B) (DBPB)
          Length = 323

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
 Frame = -3

Query: 517 GEEARP-RPSQGRGGDPRVHRQPPTSASTDDLQEEGTKCHQGDQEVCPEGHGNK*CPHRR 341
           GE+ RP R +  RG  PR  R PP      +   E  K +QGD     E  G +  P RR
Sbjct: 226 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGD-----ETQGQQ-PPQRR 279

Query: 340 *AQQAHLEQRHQECP-----EESPCQDCPQE 263
             +  +  +R  E P     +E+   D P E
Sbjct: 280 YRRNFNYRRRRPENPKPQDGKETKAADPPAE 310

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>ADA2A_PIG (P18871) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)|
           (Alpha-2A adrenoreceptor) (Alpha-2AAR)
          Length = 450

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
 Frame = -3

Query: 577 AAASIE--AER---GAGRKEAVGDVGEEARPRPSQGRGGDPRVHRQPPTSASTDDLQEEG 413
           AAA++   AER   G G +  VG VG EA P P Q  G         P  A   DL+E  
Sbjct: 238 AAAALPGGAERRPNGLGPERGVGRVGAEAEPLPVQLNGAPGEPAPAGPRDADGLDLEESS 297

Query: 412 TKCH 401
           +  H
Sbjct: 298 SSEH 301

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>YBOX1_RAT (P62961) Nuclease sensitive element-binding protein 1|
           (Y-box-binding protein 1) (Y-box transcription factor)
           (YB-1) (CCAAT-binding transcription factor I subunit A)
           (CBF-A) (Enhancer factor I subunit A) (EFI-A)
           (DNA-binding protein B) (DBPB)
          Length = 321

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
 Frame = -3

Query: 517 GEEARP-RPSQGRGGDPRVHRQPPTSASTDDLQEEGTKCHQGDQEVCPEGHGNK*CPHRR 341
           GE+ RP R +  RG  PR  R PP      +   E  K +QGD     E  G +  P RR
Sbjct: 224 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGD-----ETQGQQ-PPQRR 277

Query: 340 *AQQAHLEQRHQECP-----EESPCQDCPQE 263
             +  +  +R  E P     +E+   D P E
Sbjct: 278 YRRNFNYRRRRPENPKPQDGKETKAADPPAE 308

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>YBOX1_MOUSE (P62960) Nuclease sensitive element-binding protein 1|
           (Y-box-binding protein 1) (Y-box transcription factor)
           (YB-1) (CCAAT-binding transcription factor I subunit A)
           (CBF-A) (Enhancer factor I subunit A) (EFI-A)
           (DNA-binding protein B) (DBPB)
          Length = 321

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
 Frame = -3

Query: 517 GEEARP-RPSQGRGGDPRVHRQPPTSASTDDLQEEGTKCHQGDQEVCPEGHGNK*CPHRR 341
           GE+ RP R +  RG  PR  R PP      +   E  K +QGD     E  G +  P RR
Sbjct: 224 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGD-----ETQGQQ-PPQRR 277

Query: 340 *AQQAHLEQRHQECP-----EESPCQDCPQE 263
             +  +  +R  E P     +E+   D P E
Sbjct: 278 YRRNFNYRRRRPENPKPQDGKETKAADPPAE 308

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>GDF6_BOVIN (P55106) Growth/differentiation factor 6 precursor (GDF-6)|
           (Cartilage-derived morphogenetic protein 2) (CDMP-2)
           (Fragment)
          Length = 436

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -1

Query: 573 QPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNL 451
           +PP +P+EE  +RRP +  E +  PG R   +V  EY +++
Sbjct: 38  EPPPRPQEEP-QRRPPQQPEAREPPG-RGPRLVPHEYMLSI 76

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>THOC2_HUMAN (Q8NI27) THO complex subunit 2 (Tho2)|
          Length = 1478

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
 Frame = -1

Query: 579  SPQPPSKPREEQGERRPSEMSEKKRAPGPRKDE----VVTREYTVNLPQAPPRMTFKKKA 412
            +P P SK +E + +++  + S ++     +KDE       R+++ N  + PP +T ++K 
Sbjct: 1328 TPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLTKRRKE 1387

Query: 411  PNAIKEIRK 385
             N    + K
Sbjct: 1388 ENGTMGVSK 1396

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>SH3K1_HUMAN (Q96B97) SH3-domain kinase-binding protein 1 (Cbl-interacting|
           protein of 85 kDa) (Human Src-family kinase-binding
           protein 1) (HSB-1) (CD2-binding protein 3) (CD2BP3)
          Length = 665

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = -1

Query: 576 PQPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAI 400
           P PPS P  +QG        E K+ P  R + +  R      P+  P++  +K +  AI
Sbjct: 340 PPPPSAPVIKQGAGTTERKHEIKKIPPERPEMLPNRTEEKERPEREPKLDLQKPSVPAI 398

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>RL31_PYRAE (Q8ZTU2) 50S ribosomal protein L31e|
          Length = 91

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = -1

Query: 522 MSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKFAQKAMGTND--VR 349
           MSE+K+        V++REY +NL +A   ++  K+A  A+  IR+F  + +      V+
Sbjct: 1   MSEEKKV-------VLSREYVINLRRA-YEVSRTKRAKYAVGLIRRFVARHLKVEPKAVK 52

Query: 348 IDVKLNKHIWSSGI 307
           I   LN  +W+  I
Sbjct: 53  IGQLLNTALWARSI 66

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>SCG1_MOUSE (P16014) Secretogranin-1 precursor (Secretogranin I) (SgI)|
           (Chromogranin B) (CgB)
          Length = 677

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = -1

Query: 576 PQPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIK 397
           P+   + R  +G +     SE+ RAP PR +E   REY  N P +    T  +      +
Sbjct: 346 PEYGEESRSYRGLQYRGRGSEEDRAPRPRSEESQEREYKRNHPDSELESTANRHGEETEE 405

Query: 396 E 394
           E
Sbjct: 406 E 406

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>TOP2_ARATH (P30182) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)|
          Length = 1473

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 2/135 (1%)
 Frame = -1

Query: 561  KPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRKF 382
            KP+  QG ++ +  SE   A     D   T      + +   R   KKKAP A KE+ + 
Sbjct: 1242 KPKARQGAKKKASESETTEASHSAMD---TDNNVAEVVKPKGRQGAKKKAPAAAKEVEE- 1297

Query: 381  AQKAMGTNDVRIDV--KLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVTVAE 208
                    D  +D+  +L ++ + S                 +D++D       +V VA 
Sbjct: 1298 --------DEMLDLAQRLAQYNFGSAPADSSKTAETSKAIAVDDDDDD-----VVVEVAP 1344

Query: 207  VPQEGLKGLGTKVVE 163
            V + G K   TK  +
Sbjct: 1345 VKKGGRKPAATKAAK 1359

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>ADA2A_CAVPO (Q60474) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)|
           (Alpha-2A adrenoreceptor) (Alpha-2AAR)
          Length = 450

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -3

Query: 550 GAGRKEAVGDVGEEARPRPSQGRGGDPRVHRQPPTSASTDDLQEEGTKCH 401
           G G +  VG  G EA P P+Q  G         P  A   DL+E  +  H
Sbjct: 252 GLGLERGVGPGGAEAEPLPTQVNGAPGEPAPAGPRDAEALDLEESSSSEH 301

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>PTH_SILPO (Q5LV91) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 239

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 468 RGSPPRPCEGRGRASSPTSPTASFRPAPLSASMEAAA 578
           R +PPRP  G GR  + T   A   PAP ++   A A
Sbjct: 186 RTAPPRPSTGTGRPPAKTPARAEEPPAPAASPAPATA 222

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>NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neurofilament|
           protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1026

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = -1

Query: 579 SPQPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAI 400
           SP+    P +E  +    E+ +K+    P K+E   +E  V   + PP+   ++KAP   
Sbjct: 801 SPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKV---KEPPKKAEEEKAPATP 857

Query: 399 KEIRK 385
           K   K
Sbjct: 858 KTEEK 862

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>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            4) (Histone acetyltransferase MOZ2) (Monocytic leukemia
            zinc finger protein-related factor) (Histone
            acetyltransferas
          Length = 2073

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -1

Query: 564  SKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIRK 385
            S+  EE+ +    E  E++      ++E    E   N+  +PPR+T  K    AIK  R 
Sbjct: 1069 SEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLT--KPQSVAIKRKRP 1126

Query: 384  FAQK 373
            F  K
Sbjct: 1127 FVLK 1130

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>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC|
           3.6.1.-)
          Length = 803

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = -1

Query: 576 PQPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKK 415
           PQPP +P  E+    P    E+  AP P  + V       +LP APP    KKK
Sbjct: 15  PQPPPEP-VERPPTPPPPPPEESVAPPPPPEVVAPPPPPEDLPPAPPPPEPKKK 67

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>YBOX1_CHICK (Q06066) Nuclease sensitive element-binding protein 1 (Y-box|
           binding protein 1) (Y-box transcription factor)
          Length = 321

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -3

Query: 517 GEEARP-RPSQGRGGDPRVHRQPPTSASTDDLQEEGTKCHQGDQEVCPEGHGNK*CPHRR 341
           GE+ RP R +  RG  PR  R PP      +   E  K +QGD     E  G +  P RR
Sbjct: 224 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGD-----ETQGQQ-PPQRR 277

Query: 340 *AQQAHLEQRHQECPE 293
             +  +  +R  E P+
Sbjct: 278 YRRNFNYRRRRPENPK 293

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>CHLD_TOBAC (O24133) Magnesium-chelatase subunit chlD, chloroplast precursor|
           (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase)
           (Mg-chelatase subunit D)
          Length = 758

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = -1

Query: 573 QPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKE 394
           QPP  P   Q +    E +E++      +++   RE     PQ P    F  +     ++
Sbjct: 408 QPPPPPPPPQNQDSSEEQNEEEEKEEEDQEDEKDRENEQQQPQVPDEFIFDAEGGLVDEK 467

Query: 393 IRKFAQKA 370
           +  FAQ+A
Sbjct: 468 LLFFAQQA 475

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>GTR10_HUMAN (O95528) Solute carrier family 2, facilitated glucose transporter|
           member 10 (Glucose transporter type 10)
          Length = 541

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = -1

Query: 567 PSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAP 409
           P  PR  + +R P   + KK  P PR  +          P APPR+      P
Sbjct: 354 PPIPRTNEDQREPILSTAKKTKPHPRSGD----------PSAPPRLALSSALP 396

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>ZN185_HUMAN (O15231) Zinc finger protein 185 (LIM-domain protein ZNF185) (P1-A)|
          Length = 457

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = -3

Query: 538 KEAVGDVGEEARPRPSQGRG--GDPRVHRQPPTSASTDDLQEEGTKCHQ 398
           K+    VGE  + RP   RG  GDP V  Q P   ST + Q   +   Q
Sbjct: 245 KDVATKVGEAWQDRPGAPRGGQGDPAVPTQQPADPSTPEQQNSPSGSEQ 293

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>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)|
            (SMART/HDAC1-associated repressor protein)
          Length = 3644

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = -1

Query: 582  VSPQPPSKPRE--EQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMT 427
            V+P+P S   E  E+    PS   EK   P P  +E       V++P   PR +
Sbjct: 1662 VTPEPASSAPEKAEEAAEAPSPAGEKPAEPAPVSEETKLVSEPVSVPVEQPRQS 1715

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>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = -1

Query: 564 SKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNA 403
           S+P++ + +++  +  EKK+    RK+EV   + +    + PP+ T K  + N+
Sbjct: 529 SQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKS-KAKEPPPKKTKKNNSSNS 581

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>MKL2_MOUSE (P59759) MKL/myocardin-like protein 2 (Myocardin-related|
           transcription factor B) (MRTF-B)
          Length = 1080

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +3

Query: 474 SPPRPC--EGRGRASSPTSPTASFRPAPLSASMEA 572
           SP +P   E +G A+SP+ P  S  P P++AS  A
Sbjct: 185 SPDQPASQESQGSAASPSEPKVSASPPPVTASTPA 219

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>YPRR_ECOLI (P03848) Hypothetical protein repA4|
          Length = 128

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -1

Query: 573 QPPSKPRE--EQGERRPSEMSEKKRAPGPRKDEVVTREY 463
           QPP KPR   E   + PS ++EK+  PGP+    V   Y
Sbjct: 22  QPPEKPRSSAELKPQSPSLITEKRPRPGPKGRNRVAFNY 60

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>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22|
          Length = 881

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -1

Query: 579 SPQPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPR 433
           SP PP +   EQ  RR S  +   R+P P +D    R    +L + PPR
Sbjct: 830 SPSPPPRYAREQRRRRNSSSASASRSP-PHRDSNRRR----SLSRTPPR 873

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>CNR1A_FUGRU (Q98894) Cannabinoid receptor type 1A|
          Length = 468

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
 Frame = -1

Query: 183 LGTKVVEDED*TLCLLFQS----VRT*Y-----ISAESMLGSLALAYCYLLFMMFHDFLI 31
           LGT  V +    LC++FQS     R  Y     ++   +LGS+   Y +L F +FH    
Sbjct: 125 LGTFTVLENLVVLCVIFQSRTLRCRPSYHFIGSLAVADLLGSVIFVYSFLDFHVFHK--- 181

Query: 30  EDLRRXYLFK 1
           +D    +LFK
Sbjct: 182 KDSPNVFLFK 191

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>SYNG_RAT (Q9JKC9) AP1 gamma subunit-binding protein 1 (Gamma-synergin)|
           (Fragment)
          Length = 700

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 21/90 (23%), Positives = 37/90 (41%)
 Frame = -1

Query: 450 PQAPPRMTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGIXXXXXXXXXXXX 271
           P+ PP +  +   P+A K+I +      G +      KL   + SSG+            
Sbjct: 206 PRMPPWIYNESLVPDAYKKILETTMTPTGIDTA----KLYPILMSSGLPRETLGQIWALA 261

Query: 270 XXRNDEEDAKEELYSLVTVAEVPQEGLKGL 181
                 +  KEELY+++ +  V Q G+  +
Sbjct: 262 NRTTPGKLTKEELYTVLAMVAVTQRGVPAM 291

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>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 21/79 (26%), Positives = 33/79 (41%)
 Frame = -1

Query: 579  SPQPPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAI 400
            +PQPP++P+       P+      R   P    V T + T  +P  PP       A  A 
Sbjct: 1902 TPQPPAQPQPSPVSMSPAGFPSVARTQPP--TTVSTGKPTSQVPAPPPPAQPPPAAVEAA 1959

Query: 399  KEIRKFAQKAMGTNDVRID 343
            ++I + AQ+      V I+
Sbjct: 1960 RQIEREAQQQQHLYRVNIN 1978

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>PRGC1_MOUSE (O70343) Peroxisome proliferator-activated receptor gamma|
           coactivator 1-alpha (PPAR gamma coactivator 1-alpha)
           (PPARGC-1-alpha) (PGC-1-alpha)
          Length = 797

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = -1

Query: 570 PPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEI 391
           P +KP E +   R    S+KK    P+      +  T++LP  P      K +P   K I
Sbjct: 220 PHTKPTENRNSSRDKCASKKKSHTQPQSQHAQAKPTTLSLPLTPESPNDPKGSPFENKTI 279

Query: 390 RK 385
            +
Sbjct: 280 ER 281

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>MAP1A_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)|
            (Proliferation-related protein p80) [Contains: MAP1 light
            chain LC2]
          Length = 2805

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -1

Query: 570  PPSKPREEQGERRPSEMSEKKRAPGPR-----KDEVVTREYTVNLPQAPPR 433
            PP+ P E  G+R PS   ++   P P+     K+E  T  +  ++P   P+
Sbjct: 1798 PPASPPEMVGQRVPSAPGQESPIPDPKLMPHMKNEPTTPSWLADIPPWVPK 1848

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>MA1B1_HUMAN (Q9UKM7) Endoplasmic reticulum mannosyl-oligosaccharide|
           1,2-alpha-mannosidase (EC 3.2.1.113) (ER
           alpha-1,2-mannosidase) (Mannosidase alpha class 1B
           member 1) (Man9GlcNAc2-specific-processing
           alpha-mannosidase)
          Length = 699

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
 Frame = -3

Query: 478 GDPRVHRQPPTSASTDDLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*A-----QQAHLEQ 314
           G P +  +PP+    D  QEE TK  +   +  PEG   +     R A     Q   L  
Sbjct: 164 GPPHLQIRPPSQDLKDGTQEEATKRQEAPVDPRPEGDPQRTVISWRGAVIEPEQGTELPS 223

Query: 313 RHQECPEESP 284
           R  E P + P
Sbjct: 224 RRAEVPTKPP 233

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>PRGC1_RAT (Q9QYK2) Peroxisome proliferator-activated receptor gamma|
           coactivator 1-alpha (PPAR gamma coactivator 1-alpha)
           (PPARGC-1-alpha) (PGC-1-alpha)
          Length = 796

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = -1

Query: 570 PPSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEI 391
           P +KP E +   R    S+KK    P+      +  T++LP  P      K +P   K I
Sbjct: 219 PHTKPTENRNSSRDKCASKKKSHTQPQSQHAQAKPTTLSLPLTPESPNDPKGSPFENKTI 278

Query: 390 RK 385
            +
Sbjct: 279 ER 280

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>NFM_CHICK (P16053) Neurofilament triplet M protein (160 kDa neurofilament|
            protein) (Neurofilament medium polypeptide) (NF-M)
          Length = 857

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 4/139 (2%)
 Frame = -1

Query: 567  PSKPREEQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLPQAPPRMTFKKKAPNAIKEIR 388
            P KP   +  R P + +  ++   P K     +  T   P++P + +   K   A+ E  
Sbjct: 670  PEKPASPEKPRTPEKPASPEKPATPEKPRTPEKPATPEKPRSPEKPSSPLKDEKAVVEES 729

Query: 387  KFAQKAMGTNDVRIDVKLNKHIWSSGIXXXXXXXXXXXXXXRNDEEDAKEELYSLVT--- 217
                K      V  +V+++K      I                 E++A+EE   +VT   
Sbjct: 730  ITVTK---VTKVTAEVEVSKEARKEDIAVNGEVEEKKDEA---KEKEAEEEEKGVVTNGL 783

Query: 216  -VAEVPQEGLKGLGTKVVE 163
             V+ V ++G K + TK  E
Sbjct: 784  DVSPVDEKGEKVVVTKKAE 802


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,244,312
Number of Sequences: 219361
Number of extensions: 1503944
Number of successful extensions: 6285
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 5555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6253
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result