ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19o14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465152.1| Oryza sativa (japonica cultivar-group), mRNA 58 4e-05
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
3dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
4dbj|AK102077.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
5gb|AC154326.1| Mus musculus chromosome 16 clone RP24-496J3, comp... 44 0.61
6ref|XM_448591.1| Candida glabrata CBS138, CAGL0K08514g partial mRNA 42 2.4
7gb|AY337026.1| Neopsylla biseta 16S ribosomal RNA gene, partial ... 42 2.4
8emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 42 2.4
9gb|AC020603.4|AC020603 Homo sapiens BAC clone RP11-534K13 from 8... 42 2.4
10dbj|AP005364.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.4
11dbj|AP006391.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 2.4
12ref|NM_201950.1| Arabidopsis thaliana GLX2-1 (GLYOXALASE 2-1); h... 40 9.6
13ref|NM_129904.2| Arabidopsis thaliana GLX2-1 (GLYOXALASE 2-1); h... 40 9.6
14gb|AC167725.9| Mus musculus BAC RP24-421G17 (Roswell Park Cance... 40 9.6
15gb|AY542981.1| Bigelowiella natans dynein 8 kDa light chain mRNA... 40 9.6
16gb|AC102784.8| Mus musculus chromosome 1, clone RP23-408B17, com... 40 9.6
17gb|AC182586.3| Pan troglodytes BAC clone CH251-499F21 from chrom... 40 9.6
18emb|BX322573.4| Human DNA sequence from clone RP11-343N7 on chro... 40 9.6
19emb|AL445670.19| Human DNA sequence from clone RP11-520B13 on ch... 40 9.6
20emb|AL390726.19| Human DNA sequence from clone RP11-392E22 on ch... 40 9.6
21emb|AL050322.13|HSJ727I10 Human DNA sequence from clone RP4-727I... 40 9.6
22gb|AY091278.1| Arabidopsis thaliana putative glyoxalase II (At2g... 40 9.6
23gb|AY063806.1| Arabidopsis thaliana putative glyoxalase II (At2g... 40 9.6
24emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genom... 40 9.6
25emb|AL096796.1|SPBC839 S.pombe chromosome II cosmid c839 40 9.6
26emb|CR376838.7| Zebrafish DNA sequence from clone DKEY-15F23 in ... 40 9.6
27gb|AC087865.8| Homo sapiens 12 BAC RP11-66D24 (Roswell Park Canc... 40 9.6
28gb|AC170732.3| Sorex araneus clone SA_Ba-167D21, complete sequence 40 9.6
29gb|AF246898.1| Streptococcus pneumoniae serotype 6A capsular pol... 40 9.6
30gb|AC002335.3| Arabidopsis thaliana chromosome 2 clone T1O24 map... 40 9.6
31gb|AC098976.2| Homo sapiens BAC clone RP11-751L19 from 4, comple... 40 9.6
32emb|BX511027.20| Zebrafish DNA sequence from clone CH211-281P14 ... 40 9.6
33gb|AC102465.11| Mus musculus chromosome 3, clone RP24-333O23, co... 40 9.6
34gb|AC016602.7| Homo sapiens chromosome 5 clone CTD-2061O12, comp... 40 9.6
35ref|NM_001021148.1| Schizosaccharomyces pombe 972h- hypothetical... 40 9.6
36gb|AF316642.1|AF316642 Streptococcus pneumoniae serotype 18C cap... 40 9.6
37gb|AF316640.1|AF316640 Streptococcus pneumoniae serotype 6B caps... 40 9.6
38emb|BX819061.1|CNS0A9US Arabidopsis thaliana Full-length cDNA Co... 40 9.6
39emb|BX820884.1|CNS0A9LP Arabidopsis thaliana Full-length cDNA Co... 40 9.6
40emb|BX820528.1|CNS0A9HY Arabidopsis thaliana Full-length cDNA Co... 40 9.6
41emb|BX818809.1|CNS0A9SG Arabidopsis thaliana Full-length cDNA Co... 40 9.6
42emb|BX819826.1|CNS0A9F8 Arabidopsis thaliana Full-length cDNA Co... 40 9.6
43gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome... 40 9.6
44gb|AC008950.4|AC008950 Homo sapiens chromosome 5 clone CTD-2336H... 40 9.6
45gb|AC144753.3| Ornithorhynchus anatinus clone OA_Bb-228F7, compl... 40 9.6
46dbj|AB061258.1| Solanum tuberosum mRNA for cytochrome P450, part... 40 9.6
47gb|AC153636.2| Mus musculus 6 BAC RP23-76E12 (Roswell Park Cance... 40 9.6
48emb|CR931688.1| Streptococcus pneumoniae strain 24F L (serotype ... 40 9.6
49emb|CR931639.1| Streptococcus pneumoniae strain 2616/39 (serotyp... 40 9.6
50emb|CR931718.1| Streptococcus pneumoniae strain Eddy nr. 72 (ser... 40 9.6
51emb|CR931673.1| Streptococcus pneumoniae strain 4593/40 (serotyp... 40 9.6
52emb|CR931672.1| Streptococcus pneumoniae strain 1033/41 (serotyp... 40 9.6
53emb|CR931671.1| Streptococcus pneumoniae strain 8609/43 (serotyp... 40 9.6
54gb|L43967.2| Mycoplasma genitalium G37, complete genome 40 9.6
55gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, co... 40 9.6
56gb|AC174458.2| Mus musculus BAC clone RP23-282D14 from chromosom... 40 9.6
57gb|U90928.1|ATU90928 Arabidopsis thaliana glyoxalase II mitochon... 40 9.6
58gb|U90927.1|ATU90927 Arabidopsis thaliana glyoxalase II isozyme ... 40 9.6
59dbj|AP005357.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 9.6 
>ref|XM_465152.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1401

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 484 atggtagcatctcttcattacttgtatgaaactcctgcagtgtttgtaagtatgagaaac 543
           |||||||  ||| |||||| ||||||||||||||||||  ||||| || |||||||||| 
Sbjct: 903 atggtagggtctgttcattgcttgtatgaaactcctgccatgtttatatgtatgagaaaa 844

                                    
Query: 544 acaggtccttgtgtgcgataccccc 568
            |||| | ||||||  |||||||||
Sbjct: 843 gcaggactttgtgtatgataccccc 819



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 395 gagatggacccacccaagaagaaggcattaggc 427
           |||||||| ||||||||||||||| ||||||||
Sbjct: 992 gagatggatccacccaagaagaagacattaggc 960
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                            
Query: 484      atggtagcatctcttcattacttgtatgaaactcctgcagtgtttgtaagtatgagaaac 543
                |||||||  ||| |||||| ||||||||||||||||||  ||||| || |||||||||| 
Sbjct: 11935690 atggtagggtctgttcattgcttgtatgaaactcctgccatgtttatatgtatgagaaaa 11935749

                                         
Query: 544      acaggtccttgtgtgcgataccccc 568
                 |||| | ||||||  |||||||||
Sbjct: 11935750 gcaggactttgtgtatgataccccc 11935774



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 395      gagatggacccacccaagaagaaggcattaggc 427
                |||||||| ||||||||||||||| ||||||||
Sbjct: 11935239 gagatggatccacccaagaagaagacattaggc 11935271
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>dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0543C11
          Length = 159075

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 484   atggtagcatctcttcattacttgtatgaaactcctgcagtgtttgtaagtatgagaaac 543
             |||||||  ||| |||||| ||||||||||||||||||  ||||| || |||||||||| 
Sbjct: 32968 atggtagggtctgttcattgcttgtatgaaactcctgccatgtttatatgtatgagaaaa 33027

                                      
Query: 544   acaggtccttgtgtgcgataccccc 568
              |||| | ||||||  |||||||||
Sbjct: 33028 gcaggactttgtgtatgataccccc 33052



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 395   gagatggacccacccaagaagaaggcattaggc 427
             |||||||| ||||||||||||||| ||||||||
Sbjct: 32517 gagatggatccacccaagaagaagacattaggc 32549
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>dbj|AK102077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082I12, full
           insert sequence
          Length = 1401

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 484 atggtagcatctcttcattacttgtatgaaactcctgcagtgtttgtaagtatgagaaac 543
           |||||||  ||| |||||| ||||||||||||||||||  ||||| || |||||||||| 
Sbjct: 902 atggtagggtctgttcattgcttgtatgaaactcctgccatgtttatatgtatgagaaaa 843

                                    
Query: 544 acaggtccttgtgtgcgataccccc 568
            |||| | ||||||  |||||||||
Sbjct: 842 gcaggactttgtgtatgataccccc 818



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 395 gagatggacccacccaagaagaaggcattaggc 427
           |||||||| ||||||||||||||| ||||||||
Sbjct: 991 gagatggatccacccaagaagaagacattaggc 959
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>gb|AC154326.1| Mus musculus chromosome 16 clone RP24-496J3, complete sequence
          Length = 167679

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 491    catctcttcattacttgtatga 512
              ||||||||||||||||||||||
Sbjct: 108091 catctcttcattacttgtatga 108070
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>ref|XM_448591.1| Candida glabrata CBS138, CAGL0K08514g partial mRNA
          Length = 4470

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 379  agaaatgcatgattttgagat 399
            |||||||||||||||||||||
Sbjct: 2262 agaaatgcatgattttgagat 2282
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>gb|AY337026.1| Neopsylla biseta 16S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 545

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 66  ataaatacagcctatatttca 86
           |||||||||||||||||||||
Sbjct: 167 ataaatacagcctatatttca 147
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>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 379    agaaatgcatgattttgagat 399
              |||||||||||||||||||||
Sbjct: 855522 agaaatgcatgattttgagat 855502
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>gb|AC020603.4|AC020603 Homo sapiens BAC clone RP11-534K13 from 8, complete sequence
          Length = 202317

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 372    aaggaagagaaatgcatgatt 392
              |||||||||||||||||||||
Sbjct: 173867 aaggaagagaaatgcatgatt 173847
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>dbj|AP005364.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1970D8, complete
             sequence
          Length = 168850

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 372   aaggaagagaaatgcatgatt 392
             |||||||||||||||||||||
Sbjct: 21352 aaggaagagaaatgcatgatt 21332
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>dbj|AP006391.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09E08, TM0265,
             complete sequence
          Length = 100864

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 379   agaaatgcatgattttgagat 399
             |||||||||||||||||||||
Sbjct: 38196 agaaatgcatgattttgagat 38216
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>ref|NM_201950.1| Arabidopsis thaliana GLX2-1 (GLYOXALASE 2-1); hydroxyacylglutathione
            hydrolase AT2G43430 (GLX2-1) transcript variant
            AT2G43430.2 mRNA, complete cds
          Length = 1746

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 607  cttcagaagtatgtccattccagg 630
            ||||||||||||||| ||||||||
Sbjct: 1077 cttcagaagtatgtcaattccagg 1054
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>ref|NM_129904.2| Arabidopsis thaliana GLX2-1 (GLYOXALASE 2-1);
           hydroxyacylglutathione hydrolase AT2G43430 (GLX2-1)
           transcript variant AT2G43430.1 mRNA, complete cds
          Length = 1387

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 607 cttcagaagtatgtccattccagg 630
           ||||||||||||||| ||||||||
Sbjct: 698 cttcagaagtatgtcaattccagg 675
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>gb|AC167725.9| Mus musculus  BAC RP24-421G17 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 210774

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   ttcattacttgtatgaaact 516
             ||||||||||||||||||||
Sbjct: 18712 ttcattacttgtatgaaact 18693
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>gb|AY542981.1| Bigelowiella natans dynein 8 kDa light chain mRNA, complete cds
          Length = 532

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 gtccaaggtaaaagtagatg 136
           ||||||||||||||||||||
Sbjct: 261 gtccaaggtaaaagtagatg 242
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>gb|AC102784.8| Mus musculus chromosome 1, clone RP23-408B17, complete sequence
          Length = 195644

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    taaatacagcctatatttca 86
             ||||||||||||||||||||
Sbjct: 14691 taaatacagcctatatttca 14710
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>gb|AC182586.3| Pan troglodytes BAC clone CH251-499F21 from chromosome 9, complete
              sequence
          Length = 208237

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    ggaagagaaatgcatgattt 393
              ||||||||||||||||||||
Sbjct: 180788 ggaagagaaatgcatgattt 180769
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>emb|BX322573.4| Human DNA sequence from clone RP11-343N7 on chromosome X, complete
             sequence
          Length = 72675

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 127   aaagtagatggccaaaactgtgat 150
             ||||||| ||||||||||||||||
Sbjct: 69137 aaagtaggtggccaaaactgtgat 69160
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>emb|AL445670.19| Human DNA sequence from clone RP11-520B13 on chromosome 9 Contains the 5'
              end of a novel gene (MGC12954), the CTSL2 gene for
              cathepsin L2 (CTSU, CTSV, CATL2), a pseudogene similar to
              part of growth arrest-specific 2 like 1 (GAS2L1), a
              transcription elongation factor A (SII), 1 (TFS2, GTFS2)
              (TCEA1) pseudogene, a novel gene, a vomeronasal 1
              pseudogene, a noval pseudogene and four CpG islands,
              complete sequence
          Length = 168026

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    ggaagagaaatgcatgattt 393
              ||||||||||||||||||||
Sbjct: 103715 ggaagagaaatgcatgattt 103696
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>emb|AL390726.19| Human DNA sequence from clone RP11-392E22 on chromosome 9 Contains a
             pseudogene similar to part of growth arrest-specific 2
             like 1 (GAR22, MGC17243) (GAS2L1), a FKSG83 pseudogene,
             two novel pseudogenes, a novel gene, possible ortholog of
             mouse RIKEN cDNA 2810453I06 gene, a pseudogene similar to
             sorting nexin associated golgi protein 1 (SNAG1) and a CpG
             island, complete sequence
          Length = 84881

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   ggaagagaaatgcatgattt 393
             ||||||||||||||||||||
Sbjct: 14649 ggaagagaaatgcatgattt 14630
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>emb|AL050322.13|HSJ727I10 Human DNA sequence from clone RP4-727I10 on chromosome 20 Contains a
            novel gene, ESTs, STSs and GSSs, complete sequence
          Length = 114152

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 610  cagaagtatgtccattccag 629
            ||||||||||||||||||||
Sbjct: 5982 cagaagtatgtccattccag 5963
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>gb|AY091278.1| Arabidopsis thaliana putative glyoxalase II (At2g43430) mRNA,
           complete cds
          Length = 1027

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 607 cttcagaagtatgtccattccagg 630
           ||||||||||||||| ||||||||
Sbjct: 507 cttcagaagtatgtcaattccagg 484
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>gb|AY063806.1| Arabidopsis thaliana putative glyoxalase II (At2g43430) mRNA,
           complete cds
          Length = 1348

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 607 cttcagaagtatgtccattccagg 630
           ||||||||||||||| ||||||||
Sbjct: 662 cttcagaagtatgtcaattccagg 639
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>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   accagatacgccaggcagaa 249
             ||||||||||||||||||||
Sbjct: 84288 accagatacgccaggcagaa 84307
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>emb|AL096796.1|SPBC839 S.pombe chromosome II cosmid c839
          Length = 40357

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  acttgaacctcgtagtgaag 333
            ||||||||||||||||||||
Sbjct: 3803 acttgaacctcgtagtgaag 3784
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>emb|CR376838.7| Zebrafish DNA sequence from clone DKEY-15F23 in linkage group 14,
              complete sequence
          Length = 256006

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     aaatacagcctatatttcac 87
              ||||||||||||||||||||
Sbjct: 160107 aaatacagcctatatttcac 160088
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>gb|AC087865.8| Homo sapiens 12 BAC RP11-66D24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169045

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    tgaaatggaaatcttgaatt 365
              ||||||||||||||||||||
Sbjct: 143971 tgaaatggaaatcttgaatt 143952
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>gb|AC170732.3| Sorex araneus clone SA_Ba-167D21, complete sequence
          Length = 160765

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 531    aagtatgagaaacacaggtc 550
              ||||||||||||||||||||
Sbjct: 137761 aagtatgagaaacacaggtc 137742
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>gb|AF246898.1| Streptococcus pneumoniae serotype 6A capsular polysaccharide locus,
            partial sequence
          Length = 11480

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   tttgataatctcaactcctc 109
            ||||||||||||||||||||
Sbjct: 6685 tttgataatctcaactcctc 6704
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>gb|AC002335.3| Arabidopsis thaliana chromosome 2 clone T1O24 map CIC10F02, complete
             sequence
          Length = 102057

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 607   cttcagaagtatgtccattccagg 630
             ||||||||||||||| ||||||||
Sbjct: 51684 cttcagaagtatgtcaattccagg 51707
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>gb|AC098976.2| Homo sapiens BAC clone RP11-751L19 from 4, complete sequence
          Length = 165221

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 175   caagccaaatcgtgtcgagaaaatgaac 202
             ||||||| ||| ||||||||||||||||
Sbjct: 89007 caagccacatcatgtcgagaaaatgaac 88980
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>emb|BX511027.20| Zebrafish DNA sequence from clone CH211-281P14 in linkage group 14,
              complete sequence
          Length = 198761

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     aaatacagcctatatttcac 87
              ||||||||||||||||||||
Sbjct: 160800 aaatacagcctatatttcac 160781
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>gb|AC102465.11| Mus musculus chromosome 3, clone RP24-333O23, complete sequence
          Length = 138893

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 364 tttctcataaggaagagaaa 383
           ||||||||||||||||||||
Sbjct: 307 tttctcataaggaagagaaa 288
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>gb|AC016602.7| Homo sapiens chromosome 5 clone CTD-2061O12, complete sequence
          Length = 186265

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   aaaactgtgatgctccagcc 159
             ||||||||||||||||||||
Sbjct: 81891 aaaactgtgatgctccagcc 81910
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>ref|NM_001021148.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC839.02),
           partial mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 314 acttgaacctcgtagtgaag 333
           ||||||||||||||||||||
Sbjct: 818 acttgaacctcgtagtgaag 799
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>gb|AF316642.1|AF316642 Streptococcus pneumoniae serotype 18C capsular polysaccharide gene
             cluster, complete sequence
          Length = 21648

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tttgataatctcaactcctc 109
             ||||||||||||||||||||
Sbjct: 16893 tttgataatctcaactcctc 16912
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>gb|AF316640.1|AF316640 Streptococcus pneumoniae serotype 6B capsular polysaccharide gene
             cluster, complete sequence
          Length = 17160

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tttgataatctcaactcctc 109
             ||||||||||||||||||||
Sbjct: 12707 tttgataatctcaactcctc 12726
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>emb|BX819061.1|CNS0A9US Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB41ZB01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1104

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 607 cttcagaagtatgtccattccagg 630
           ||||||||||||||| ||||||||
Sbjct: 537 cttcagaagtatgtcaattccagg 514
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>emb|BX820884.1|CNS0A9LP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH78ZG10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1708

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 607  cttcagaagtatgtccattccagg 630
            ||||||||||||||| ||||||||
Sbjct: 1076 cttcagaagtatgtcaattccagg 1053
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>emb|BX820528.1|CNS0A9HY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH44ZG08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1240

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 607 cttcagaagtatgtccattccagg 630
           ||||||||||||||| ||||||||
Sbjct: 641 cttcagaagtatgtcaattccagg 618
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>emb|BX818809.1|CNS0A9SG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB15ZD08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1164

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 607 cttcagaagtatgtccattccagg 630
           ||||||||||||||| ||||||||
Sbjct: 548 cttcagaagtatgtcaattccagg 525
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>emb|BX819826.1|CNS0A9F8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS32ZF06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1314

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 607 cttcagaagtatgtccattccagg 630
           ||||||||||||||| ||||||||
Sbjct: 672 cttcagaagtatgtcaattccagg 649
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>gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome 13, complete sequence
          Length = 169417

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   gtagatggccaaaactgtga 149
             ||||||||||||||||||||
Sbjct: 74881 gtagatggccaaaactgtga 74862
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>gb|AC008950.4|AC008950 Homo sapiens chromosome 5 clone CTD-2336H4, complete sequence
          Length = 111183

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   aaaactgtgatgctccagcc 159
             ||||||||||||||||||||
Sbjct: 48750 aaaactgtgatgctccagcc 48769
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>gb|AC144753.3| Ornithorhynchus anatinus clone OA_Bb-228F7, complete sequence
          Length = 116899

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   aagagaaatgcatgattttg 395
             ||||||||||||||||||||
Sbjct: 96519 aagagaaatgcatgattttg 96538
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>dbj|AB061258.1| Solanum tuberosum mRNA for cytochrome P450, partial cds
          Length = 1520

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 aaatcttgaatttctcataa 373
           ||||||||||||||||||||
Sbjct: 604 aaatcttgaatttctcataa 585
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>gb|AC153636.2| Mus musculus 6 BAC RP23-76E12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 164242

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 497    ttcattacttgtatgaaact 516
              ||||||||||||||||||||
Sbjct: 127201 ttcattacttgtatgaaact 127182
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>emb|CR931688.1| Streptococcus pneumoniae strain 24F L (serotype 24f)
          Length = 24165

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tttgataatctcaactcctc 109
             ||||||||||||||||||||
Sbjct: 19339 tttgataatctcaactcctc 19358
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>emb|CR931639.1| Streptococcus pneumoniae strain 2616/39 (serotype 6b)
          Length = 17506

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tttgataatctcaactcctc 109
             ||||||||||||||||||||
Sbjct: 12680 tttgataatctcaactcctc 12699
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>emb|CR931718.1| Streptococcus pneumoniae strain Eddy nr. 72 (serotype 45)
          Length = 27591

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tttgataatctcaactcctc 109
             ||||||||||||||||||||
Sbjct: 22372 tttgataatctcaactcctc 22391
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>emb|CR931673.1| Streptococcus pneumoniae strain 4593/40 (serotype 18c)
          Length = 21819

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tttgataatctcaactcctc 109
             ||||||||||||||||||||
Sbjct: 16994 tttgataatctcaactcctc 17013
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>emb|CR931672.1| Streptococcus pneumoniae strain 1033/41 (serotype 18b)
          Length = 21819

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tttgataatctcaactcctc 109
             ||||||||||||||||||||
Sbjct: 16994 tttgataatctcaactcctc 17013
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>emb|CR931671.1| Streptococcus pneumoniae strain 8609/43 (serotype 18a)
          Length = 21887

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tttgataatctcaactcctc 109
             ||||||||||||||||||||
Sbjct: 16984 tttgataatctcaactcctc 17003
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>gb|L43967.2| Mycoplasma genitalium G37, complete genome
          Length = 580076

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 645    cctcagataacctcctttta 664
              ||||||||||||||||||||
Sbjct: 412088 cctcagataacctcctttta 412107
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>gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, complete sequence
          Length = 149484

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   tttctcataaggaagagaaa 383
             ||||||||||||||||||||
Sbjct: 85601 tttctcataaggaagagaaa 85582
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>gb|AC174458.2| Mus musculus BAC clone RP23-282D14 from chromosome 13, complete sequence
          Length = 205673

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    gtagatggccaaaactgtga 149
              ||||||||||||||||||||
Sbjct: 172544 gtagatggccaaaactgtga 172563
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>gb|U90928.1|ATU90928 Arabidopsis thaliana glyoxalase II mitochondrial isozyme (Glx2-1)
           mRNA, nuclear gene encoding mitochondrial protein,
           complete cds
          Length = 1404

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 607 cttcagaagtatgtccattccagg 630
           ||||||||||||||| ||||||||
Sbjct: 696 cttcagaagtatgtcaattccagg 673
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>gb|U90927.1|ATU90927 Arabidopsis thaliana glyoxalase II isozyme (Glx2-1) gene, nuclear
            gene encoding mitochondrial protein, complete cds
          Length = 6570

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 607  cttcagaagtatgtccattccagg 630
            ||||||||||||||| ||||||||
Sbjct: 4563 cttcagaagtatgtcaattccagg 4540
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>dbj|AP005357.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1299A7, complete
             sequence
          Length = 157708

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 351   tggaaatcttgaatttctcataag 374
             ||||||||||| ||||||||||||
Sbjct: 52462 tggaaatcttggatttctcataag 52439


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,664,691
Number of Sequences: 3902068
Number of extensions: 6664691
Number of successful extensions: 116495
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116352
Number of HSP's gapped (non-prelim): 143
length of query: 700
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 677
effective length of database: 17,143,297,704
effective search space: 11606012545608
effective search space used: 11606012545608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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