Clone Name	rbags19n24
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_476547.1| Oryza sativa (japonica cultivar-group), mRNA	184	2e-43
2	ref|XM_507349.1| PREDICTED Oryza sativa (japonica cultivar-group...	184	2e-43
3	ref|XM_506156.2| PREDICTED Oryza sativa (japonica cultivar-group...	184	2e-43
4	dbj|AK099460.1| Oryza sativa (japonica cultivar-group) cDNA clon...	184	2e-43
5	dbj|AK072048.1| Oryza sativa (japonica cultivar-group) cDNA clon...	184	2e-43
6	dbj|AK065901.1| Oryza sativa (japonica cultivar-group) cDNA clon...	184	2e-43
7	dbj|AK062102.1| Oryza sativa (japonica cultivar-group) cDNA clon...	184	2e-43
8	gb|BT019039.1| Zea mays clone Contig558.F mRNA sequence	161	3e-36
9	gb|AY104384.1| Zea mays PCO096143 mRNA sequence	161	3e-36
10	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	113	6e-22
11	dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic D...	113	6e-22
12	ref|NM_127401.2| Arabidopsis thaliana SDH1-2 AT2G18450 (SDH1-2) ...	58	3e-05
13	gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map...	58	3e-05
14	gb|BT005938.1| Arabidopsis thaliana At2g18450 gene, complete cds	58	3e-05
15	dbj|AK119142.1| Arabidopsis thaliana At2g18450 mRNA for putative...	58	3e-05
16	ref|NM_126074.2| Arabidopsis thaliana SDH1-1 AT5G66760 (SDH1-1) ...	52	0.002
17	emb|AJ001809.1|ATSDFAS Arabidopsis thaliana mRNA for Succinate d...	52	0.002
18	gb|AY124812.1| Arabidopsis thaliana AT5g66760/MSN2_16 mRNA, comp...	52	0.002
19	gb|AF367341.1| Arabidopsis thaliana AT5g66760/MSN2_16 mRNA, comp...	52	0.002
20	gb|AF436833.1|AF436833 Arabidopsis thaliana AT5g66760/MSN2_16 mR...	52	0.002
21	gb|AY045674.1| Arabidopsis thaliana AT5g66760/MSN2_16 mRNA, comp...	52	0.002
22	dbj|AB018119.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	48	0.030
23	ref|XM_796760.1| PREDICTED: Strongylocentrotus purpuratus simila...	46	0.12
24	ref|XM_796693.1| PREDICTED: Strongylocentrotus purpuratus simila...	46	0.12
25	ref|XM_774825.1| PREDICTED: Strongylocentrotus purpuratus simila...	46	0.12
26	gb|AF385822.1| Gadus morhua blue-sensitive pigment mRNA, complet...	42	1.9
27	gb|AE008583.1| Rickettsia conorii str. Malish 7, section 15 of 1...	42	1.9
28	gb|AC103613.7| Mus musculus chromosome 14, clone RP24-75B12, com...	42	1.9
29	gb|AC156247.2| Xenopus tropicalis clone ISB1-181M9, complete seq...	42	1.9
30	gb|AC156343.2| Xenopus tropicalis clone ISB1-163H16, complete se...	42	1.9
31	emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in...	42	1.9
32	gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malay...	42	1.9
33	gb|AC161883.6| Mus musculus BAC clone RP23-91K1 from chromosome ...	42	1.9
34	emb|AL354740.29| Human DNA sequence from clone RP11-513I15 on ch...	40	7.4
35	gb|AC095034.2| Homo sapiens chromosome 1 clone RP11-545E24, comp...	40	7.4
36	gb|AC095056.3| Homo sapiens BAC clone RP11-373J21 from 4, comple...	40	7.4
37	gb|L17131.1|HUMHMGIY Homo sapiens high mobility group protein (H...	40	7.4
38	emb|CT033768.1| Medicago truncatula chromosome 5 clone mte1-72b1...	40	7.4
39	emb|AL133246.3|CNS01DUJ BAC sequence from the SPG4 candidate reg...	40	7.4
40	gb|AC132131.4| Mus musculus BAC clone RP23-356D16 from 10, compl...	40	7.4
41	emb|AL844191.16| Mouse DNA sequence from clone RP23-335E10 on ch...	40	7.4
42	emb|X82582.1|MMIGPE13 M.musculus mRNA for immunoglobulin heavy c...	40	7.4

---

>ref|XM_476547.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2188

 Score =  184 bits (93), Expect = 2e-43
 Identities = 180/209 (86%)
 Strand = Plus / Minus

                                                                        
Query: 338  tccaaggtgttcatgtgaactggcctgtattctagcctaaccttttcatcctcccagtac 397
            ||||| ||||||||||| |||||||||||| | |  | |||||| |||| ||||||||||
Sbjct: 1957 tccaatgtgttcatgtggactggcctgtatgccaagcgaaccttctcattctcccagtac 1898

                                                                        
Query: 398  cctagcgagtgcttcatccacttgtcgtcatctcttgtcttgaaatcttcgcgagcatga 457
            || ||||||||||||||||| |  || ||||||||| || |||||||||| |||||||||
Sbjct: 1897 cccagcgagtgcttcatccattgctcatcatctcttttcgtgaaatcttcacgagcatga 1838

                                                                        
Query: 458  gctcctctgctctcttggcgagcctcagctgaatgcatggttatgcatgcatttattagc 517
            ||||||||||| || |  |||||||| ||||| ||||||||||||||||||||||| |  
Sbjct: 1837 gctcctctgctttccttccgagcctctgctgagtgcatggttatgcatgcatttatcaag 1778

                                         
Query: 518  agattttctaattctatggtctctatcaa 546
            |||||||| || || ||||||||||||||
Sbjct: 1777 agattttccaactcaatggtctctatcaa 1749

---

>ref|XM_507349.1| PREDICTED Oryza sativa (japonica cultivar-group), P0507H12.6 mRNA
          Length = 2211

 Score =  184 bits (93), Expect = 2e-43
 Identities = 180/209 (86%)
 Strand = Plus / Minus

                                                                        
Query: 338  tccaaggtgttcatgtgaactggcctgtattctagcctaaccttttcatcctcccagtac 397
            ||||| ||||||||||| |||||||||||| | |  | |||||| |||| ||||||||||
Sbjct: 1954 tccaatgtgttcatgtggactggcctgtatgccaagcgaaccttctcattctcccagtac 1895

                                                                        
Query: 398  cctagcgagtgcttcatccacttgtcgtcatctcttgtcttgaaatcttcgcgagcatga 457
            || ||||||||||||||||| |  || ||||||||| || |||||||||| |||||||||
Sbjct: 1894 cccagcgagtgcttcatccattgctcatcatctcttttcgtgaaatcttcacgagcatga 1835

                                                                        
Query: 458  gctcctctgctctcttggcgagcctcagctgaatgcatggttatgcatgcatttattagc 517
            ||||||||||| || |  |||||||| ||||| ||||||||||||||||||||||| |  
Sbjct: 1834 gctcctctgctttccttccgagcctctgctgagtgcatggttatgcatgcatttatcaag 1775

                                         
Query: 518  agattttctaattctatggtctctatcaa 546
            |||||||| || || ||||||||||||||
Sbjct: 1774 agattttccaactcaatggtctctatcaa 1746

---

>ref|XM_506156.2| PREDICTED Oryza sativa (japonica cultivar-group), P0507H12.6 mRNA
          Length = 2309

 Score =  184 bits (93), Expect = 2e-43
 Identities = 180/209 (86%)
 Strand = Plus / Minus

                                                                        
Query: 338  tccaaggtgttcatgtgaactggcctgtattctagcctaaccttttcatcctcccagtac 397
            ||||| ||||||||||| |||||||||||| | |  | |||||| |||| ||||||||||
Sbjct: 1954 tccaatgtgttcatgtggactggcctgtatgccaagcgaaccttctcattctcccagtac 1895

                                                                        
Query: 398  cctagcgagtgcttcatccacttgtcgtcatctcttgtcttgaaatcttcgcgagcatga 457
            || ||||||||||||||||| |  || ||||||||| || |||||||||| |||||||||
Sbjct: 1894 cccagcgagtgcttcatccattgctcatcatctcttttcgtgaaatcttcacgagcatga 1835

                                                                        
Query: 458  gctcctctgctctcttggcgagcctcagctgaatgcatggttatgcatgcatttattagc 517
            ||||||||||| || |  |||||||| ||||| ||||||||||||||||||||||| |  
Sbjct: 1834 gctcctctgctttccttccgagcctctgctgagtgcatggttatgcatgcatttatcaag 1775

                                         
Query: 518  agattttctaattctatggtctctatcaa 546
            |||||||| || || ||||||||||||||
Sbjct: 1774 agattttccaactcaatggtctctatcaa 1746

---

>dbj|AK099460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023D02, full
            insert sequence
          Length = 2211

 Score =  184 bits (93), Expect = 2e-43
 Identities = 180/209 (86%)
 Strand = Plus / Minus

                                                                        
Query: 338  tccaaggtgttcatgtgaactggcctgtattctagcctaaccttttcatcctcccagtac 397
            ||||| ||||||||||| |||||||||||| | |  | |||||| |||| ||||||||||
Sbjct: 1954 tccaatgtgttcatgtggactggcctgtatgccaagcgaaccttctcattctcccagtac 1895

                                                                        
Query: 398  cctagcgagtgcttcatccacttgtcgtcatctcttgtcttgaaatcttcgcgagcatga 457
            || ||||||||||||||||| |  || ||||||||| || |||||||||| |||||||||
Sbjct: 1894 cccagcgagtgcttcatccattgctcatcatctcttttcgtgaaatcttcacgagcatga 1835

                                                                        
Query: 458  gctcctctgctctcttggcgagcctcagctgaatgcatggttatgcatgcatttattagc 517
            ||||||||||| || |  |||||||| ||||| ||||||||||||||||||||||| |  
Sbjct: 1834 gctcctctgctttccttccgagcctctgctgagtgcatggttatgcatgcatttatcaag 1775

                                         
Query: 518  agattttctaattctatggtctctatcaa 546
            |||||||| || || ||||||||||||||
Sbjct: 1774 agattttccaactcaatggtctctatcaa 1746

---

>dbj|AK072048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112C13, full
            insert sequence
          Length = 2188

 Score =  184 bits (93), Expect = 2e-43
 Identities = 180/209 (86%)
 Strand = Plus / Minus

                                                                        
Query: 338  tccaaggtgttcatgtgaactggcctgtattctagcctaaccttttcatcctcccagtac 397
            ||||| ||||||||||| |||||||||||| | |  | |||||| |||| ||||||||||
Sbjct: 1957 tccaatgtgttcatgtggactggcctgtatgccaagcgaaccttctcattctcccagtac 1898

                                                                        
Query: 398  cctagcgagtgcttcatccacttgtcgtcatctcttgtcttgaaatcttcgcgagcatga 457
            || ||||||||||||||||| |  || ||||||||| || |||||||||| |||||||||
Sbjct: 1897 cccagcgagtgcttcatccattgctcatcatctcttttcgtgaaatcttcacgagcatga 1838

                                                                        
Query: 458  gctcctctgctctcttggcgagcctcagctgaatgcatggttatgcatgcatttattagc 517
            ||||||||||| || |  |||||||| ||||| ||||||||||||||||||||||| |  
Sbjct: 1837 gctcctctgctttccttccgagcctctgctgagtgcatggttatgcatgcatttatcaag 1778

                                         
Query: 518  agattttctaattctatggtctctatcaa 546
            |||||||| || || ||||||||||||||
Sbjct: 1777 agattttccaactcaatggtctctatcaa 1749

---

>dbj|AK065901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048I16, full
            insert sequence
          Length = 2309

 Score =  184 bits (93), Expect = 2e-43
 Identities = 180/209 (86%)
 Strand = Plus / Minus

                                                                        
Query: 338  tccaaggtgttcatgtgaactggcctgtattctagcctaaccttttcatcctcccagtac 397
            ||||| ||||||||||| |||||||||||| | |  | |||||| |||| ||||||||||
Sbjct: 1954 tccaatgtgttcatgtggactggcctgtatgccaagcgaaccttctcattctcccagtac 1895

                                                                        
Query: 398  cctagcgagtgcttcatccacttgtcgtcatctcttgtcttgaaatcttcgcgagcatga 457
            || ||||||||||||||||| |  || ||||||||| || |||||||||| |||||||||
Sbjct: 1894 cccagcgagtgcttcatccattgctcatcatctcttttcgtgaaatcttcacgagcatga 1835

                                                                        
Query: 458  gctcctctgctctcttggcgagcctcagctgaatgcatggttatgcatgcatttattagc 517
            ||||||||||| || |  |||||||| ||||| ||||||||||||||||||||||| |  
Sbjct: 1834 gctcctctgctttccttccgagcctctgctgagtgcatggttatgcatgcatttatcaag 1775

                                         
Query: 518  agattttctaattctatggtctctatcaa 546
            |||||||| || || ||||||||||||||
Sbjct: 1774 agattttccaactcaatggtctctatcaa 1746

---

>dbj|AK062102.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A10, full
            insert sequence
          Length = 1518

 Score =  184 bits (93), Expect = 2e-43
 Identities = 180/209 (86%)
 Strand = Plus / Minus

                                                                        
Query: 338  tccaaggtgttcatgtgaactggcctgtattctagcctaaccttttcatcctcccagtac 397
            ||||| ||||||||||| |||||||||||| | |  | |||||| |||| ||||||||||
Sbjct: 1195 tccaatgtgttcatgtggactggcctgtatgccaagcgaaccttctcattctcccagtac 1136

                                                                        
Query: 398  cctagcgagtgcttcatccacttgtcgtcatctcttgtcttgaaatcttcgcgagcatga 457
            || ||||||||||||||||| |  || ||||||||| || |||||||||| |||||||||
Sbjct: 1135 cccagcgagtgcttcatccattgctcatcatctcttttcgtgaaatcttcacgagcatga 1076

                                                                        
Query: 458  gctcctctgctctcttggcgagcctcagctgaatgcatggttatgcatgcatttattagc 517
            ||||||||||| || |  |||||||| ||||| ||||||||||||||||||||||| |  
Sbjct: 1075 gctcctctgctttccttccgagcctctgctgagtgcatggttatgcatgcatttatcaag 1016

                                         
Query: 518  agattttctaattctatggtctctatcaa 546
            |||||||| || || ||||||||||||||
Sbjct: 1015 agattttccaactcaatggtctctatcaa 987

---

>gb|BT019039.1| Zea mays clone Contig558.F mRNA sequence
          Length = 832

 Score =  161 bits (81), Expect = 3e-36
 Identities = 210/253 (83%)
 Strand = Plus / Plus

                                                                       
Query: 293 gatcagtaaacacgtgcctttggcgggaaagtctcgacttcgtcatccaaggtgttcatg 352
           ||||| || ||||| || || |||||||| | ||| ||||| || || || |||||||||
Sbjct: 208 gatcaatagacacgggctttcggcgggaaggactctacttcatcgtctaatgtgttcatg 267

                                                                       
Query: 353 tgaactggcctgtattctagcctaaccttttcatcctcccagtaccctagcgagtgcttc 412
           || |||||||||||| | |  | |||||| || |  ||||||||||| || |||||||||
Sbjct: 268 tgcactggcctgtatgccaatcgaaccttctcgttttcccagtaccccagtgagtgcttc 327

                                                                       
Query: 413 atccacttgtcgtcatctcttgtcttgaaatcttcgcgagcatgagctcctctgctctct 472
           |||||||| ||||||||||||||| ||||||| || |||||||||||||||||||| || 
Sbjct: 328 atccacttctcgtcatctcttgtcgtgaaatcctcacgagcatgagctcctctgctttcc 387

                                                                       
Query: 473 tggcgagcctcagctgaatgcatggttatgcatgcatttattagcagattttctaattct 532
           |  |||||||| || |||| ||||||||||||||||||||| |  |||||||| |  || 
Sbjct: 388 ttccgagcctctgccgaatacatggttatgcatgcatttatcaaaagattttccagctca 447

                        
Query: 533 atggtctctatca 545
           | |||||||||||
Sbjct: 448 agggtctctatca 460

---

>gb|AY104384.1| Zea mays PCO096143 mRNA sequence
          Length = 2250

 Score =  161 bits (81), Expect = 3e-36
 Identities = 210/253 (83%)
 Strand = Plus / Minus

                                                                        
Query: 293  gatcagtaaacacgtgcctttggcgggaaagtctcgacttcgtcatccaaggtgttcatg 352
            ||||| || ||||| || || |||||||| | ||| ||||| || || || |||||||||
Sbjct: 1999 gatcaatagacacgagctttcggcgggaaggactctacttcatcgtctaatgtgttcatg 1940

                                                                        
Query: 353  tgaactggcctgtattctagcctaaccttttcatcctcccagtaccctagcgagtgcttc 412
            || |||||||||||| | |  | |||||| || |  ||||||||||| || |||||||||
Sbjct: 1939 tgcactggcctgtatgccaatcgaaccttctcgttttcccagtaccccagtgagtgcttc 1880

                                                                        
Query: 413  atccacttgtcgtcatctcttgtcttgaaatcttcgcgagcatgagctcctctgctctct 472
            |||||||| ||||||||||||||| ||||||| || |||||||||||||||||||| || 
Sbjct: 1879 atccacttctcgtcatctcttgtcgtgaaatcctcacgagcatgagctcctctgctttcc 1820

                                                                        
Query: 473  tggcgagcctcagctgaatgcatggttatgcatgcatttattagcagattttctaattct 532
            |  |||||||| || |||| ||||||||||||||||||||| |  |||||||| |  || 
Sbjct: 1819 ttccgagcctctgccgaatacatggttatgcatgcatttatcaaaagattttccagctca 1760

                         
Query: 533  atggtctctatca 545
            | |||||||||||
Sbjct: 1759 agggtctctatca 1747

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  113 bits (57), Expect = 6e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                           
Query: 438     tgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagctgaatgcatgg 497
               |||||||||| |||||||||||||||||||| || |  |||||||| ||||| |||||||
Sbjct: 1893588 tgaaatcttcacgagcatgagctcctctgctttccttccgagcctctgctgagtgcatgg 1893647

                                                                
Query: 498     ttatgcatgcatttattagcagattttctaattctatggtctctatcaa 546
               |||||||||||||||| |  |||||||| || || ||||||||||||||
Sbjct: 1893648 ttatgcatgcatttatcaagagattttccaactcaatggtctctatcaa 1893696



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                           
Query: 338     tccaaggtgttcatgtgaactggcctgtattctagcctaaccttttcatcctcccagtac 397
               ||||| ||||||||||| |||||||||||| | |  | |||||| |||| ||||||||||
Sbjct: 1893122 tccaatgtgttcatgtggactggcctgtatgccaagcgaaccttctcattctcccagtac 1893181

                
Query: 398     c 398
               |
Sbjct: 1893182 c 1893182

---

>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0507H12
          Length = 143030

 Score =  113 bits (57), Expect = 6e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                         
Query: 438   tgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagctgaatgcatgg 497
             |||||||||| |||||||||||||||||||| || |  |||||||| ||||| |||||||
Sbjct: 98167 tgaaatcttcacgagcatgagctcctctgctttccttccgagcctctgctgagtgcatgg 98226

                                                              
Query: 498   ttatgcatgcatttattagcagattttctaattctatggtctctatcaa 546
             |||||||||||||||| |  |||||||| || || ||||||||||||||
Sbjct: 98227 ttatgcatgcatttatcaagagattttccaactcaatggtctctatcaa 98275



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 338   tccaaggtgttcatgtgaactggcctgtattctagcctaaccttttcatcctcccagtac 397
             ||||| ||||||||||| |||||||||||| | |  | |||||| |||| ||||||||||
Sbjct: 97701 tccaatgtgttcatgtggactggcctgtatgccaagcgaaccttctcattctcccagtac 97760

              
Query: 398   c 398
             |
Sbjct: 97761 c 97761

---

>ref|NM_127401.2| Arabidopsis thaliana SDH1-2 AT2G18450 (SDH1-2) mRNA, complete cds
          Length = 2020

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                        
Query: 438  tgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagctgaatgcatgg 497
            ||||||| || |||||||| |||||||  ||||| |  | ||||||||| |||||||| |
Sbjct: 1759 tgaaatcctcacgagcatgtgctcctcgactctccttcctagcctcagcagaatgcattg 1700

                         
Query: 498  ttatgcatgcatt 510
            |||||||||||||
Sbjct: 1699 ttatgcatgcatt 1687

---

>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete
             sequence
          Length = 92861

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                         
Query: 438   tgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagctgaatgcatgg 497
             ||||||| || |||||||| |||||||  ||||| |  | ||||||||| |||||||| |
Sbjct: 17588 tgaaatcctcacgagcatgtgctcctcgactctccttcctagcctcagcagaatgcattg 17529

                          
Query: 498   ttatgcatgcatt 510
             |||||||||||||
Sbjct: 17528 ttatgcatgcatt 17516

---

>gb|BT005938.1| Arabidopsis thaliana At2g18450 gene, complete cds
          Length = 1899

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                        
Query: 438  tgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagctgaatgcatgg 497
            ||||||| || |||||||| |||||||  ||||| |  | ||||||||| |||||||| |
Sbjct: 1756 tgaaatcctcacgagcatgtgctcctcgactctccttcctagcctcagcagaatgcattg 1697

                         
Query: 498  ttatgcatgcatt 510
            |||||||||||||
Sbjct: 1696 ttatgcatgcatt 1684

---

>dbj|AK119142.1| Arabidopsis thaliana At2g18450 mRNA for putative succinate
            dehydrogenase flavoprotein subunit, complete cds, clone:
            RAFL21-49-E11
          Length = 2020

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                        
Query: 438  tgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagctgaatgcatgg 497
            ||||||| || |||||||| |||||||  ||||| |  | ||||||||| |||||||| |
Sbjct: 1759 tgaaatcctcacgagcatgtgctcctcgactctccttcctagcctcagcagaatgcattg 1700

                         
Query: 498  ttatgcatgcatt 510
            |||||||||||||
Sbjct: 1699 ttatgcatgcatt 1687

---

>ref|NM_126074.2| Arabidopsis thaliana SDH1-1 AT5G66760 (SDH1-1) mRNA, complete cds
          Length = 2335

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                        
Query: 428  tctcttgtcttgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagct 487
            |||||| || |||| ||||| |||||||| ||||||||||| || |  || || || |||
Sbjct: 1890 tctcttttcgtgaagtcttcccgagcatgtgctcctctgctttcctttcgtgcttctgct 1831

                                      
Query: 488  gaatgcatggttatgcatgcatttat 513
            |||||||| |||||| |||| |||||
Sbjct: 1830 gaatgcattgttatggatgcgtttat 1805

---

>emb|AJ001809.1|ATSDFAS Arabidopsis thaliana mRNA for Succinate dehydrogenase flavoprotein
            (alpha) subunit
          Length = 2247

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                        
Query: 428  tctcttgtcttgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagct 487
            |||||| || |||| ||||| |||||||| ||||||||||| || |  || || || |||
Sbjct: 1814 tctcttttcgtgaagtcttcccgagcatgtgctcctctgctttcctttcgtgcttctgct 1755

                                      
Query: 488  gaatgcatggttatgcatgcatttat 513
            |||||||| |||||| |||| |||||
Sbjct: 1754 gaatgcattgttatggatgcgtttat 1729

---

>gb|AY124812.1| Arabidopsis thaliana AT5g66760/MSN2_16 mRNA, complete cds
          Length = 1905

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                        
Query: 428  tctcttgtcttgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagct 487
            |||||| || |||| ||||| |||||||| ||||||||||| || |  || || || |||
Sbjct: 1772 tctcttttcgtgaagtcttcccgagcatgtgctcctctgctttcctttcgtgcttctgct 1713

                                      
Query: 488  gaatgcatggttatgcatgcatttat 513
            |||||||| |||||| |||| |||||
Sbjct: 1712 gaatgcattgttatggatgcgtttat 1687

---

>gb|AF367341.1| Arabidopsis thaliana AT5g66760/MSN2_16 mRNA, complete cds
          Length = 2037

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                        
Query: 428  tctcttgtcttgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagct 487
            |||||| || |||| ||||| |||||||| ||||||||||| || |  || || || |||
Sbjct: 1844 tctcttttcgtgaagtcttcccgagcatgtgctcctctgctttcctttcgtgcttctgct 1785

                                      
Query: 488  gaatgcatggttatgcatgcatttat 513
            |||||||| |||||| |||| |||||
Sbjct: 1784 gaatgcattgttatggatgcgtttat 1759

---

>gb|AF436833.1|AF436833 Arabidopsis thaliana AT5g66760/MSN2_16 mRNA, complete cds
          Length = 2100

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                        
Query: 428  tctcttgtcttgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagct 487
            |||||| || |||| ||||| |||||||| ||||||||||| || |  || || || |||
Sbjct: 1890 tctcttttcgtgaagtcttcccgagcatgtgctcctctgctttcctttcgtgcttctgct 1831

                                      
Query: 488  gaatgcatggttatgcatgcatttat 513
            |||||||| |||||| |||| |||||
Sbjct: 1830 gaatgcattgttatggatgcgtttat 1805

---

>gb|AY045674.1| Arabidopsis thaliana AT5g66760/MSN2_16 mRNA, complete cds
          Length = 2254

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                        
Query: 428  tctcttgtcttgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagct 487
            |||||| || |||| ||||| |||||||| ||||||||||| || |  || || || |||
Sbjct: 1842 tctcttttcgtgaagtcttcccgagcatgtgctcctctgctttcctttcgtgcttctgct 1783

                                      
Query: 488  gaatgcatggttatgcatgcatttat 513
            |||||||| |||||| |||| |||||
Sbjct: 1782 gaatgcattgttatggatgcgtttat 1757

---

>dbj|AB018119.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN2
          Length = 62927

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 438   tgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagctgaatgcatgg 497
             |||| ||||| |||||||| ||||||||||| || |  || || || ||||||||||| |
Sbjct: 62395 tgaagtcttcccgagcatgtgctcctctgctttcctttcgtgcttctgctgaatgcattg 62336

                             
Query: 498   ttatgcatgcatttat 513
             ||||| |||| |||||
Sbjct: 62335 ttatggatgcgtttat 62320

---

>ref|XM_796760.1| PREDICTED: Strongylocentrotus purpuratus similar to Succinate
            dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial precursor (Fp) (Flavoprotein subunit of
            complex II), transcript variant 3 (LOC580610), mRNA
          Length = 2560

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 436  cttgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagc 486
            |||||||||||| | |||||| ||||| |||||||| | ||| ||||||||
Sbjct: 1868 cttgaaatcttctctagcatgggctcccctgctctccttgcgtgcctcagc 1818

---

>ref|XM_796693.1| PREDICTED: Strongylocentrotus purpuratus similar to Succinate
            dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial precursor (Fp) (Flavoprotein subunit of
            complex II), transcript variant 2 (LOC580610), mRNA
          Length = 2578

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 436  cttgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagc 486
            |||||||||||| | |||||| ||||| |||||||| | ||| ||||||||
Sbjct: 1886 cttgaaatcttctctagcatgggctcccctgctctccttgcgtgcctcagc 1836

---

>ref|XM_774825.1| PREDICTED: Strongylocentrotus purpuratus similar to Succinate
            dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial precursor (Fp) (Flavoprotein subunit of
            complex II), transcript variant 1 (LOC580610), mRNA
          Length = 2554

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 436  cttgaaatcttcgcgagcatgagctcctctgctctcttggcgagcctcagc 486
            |||||||||||| | |||||| ||||| |||||||| | ||| ||||||||
Sbjct: 1862 cttgaaatcttctctagcatgggctcccctgctctccttgcgtgcctcagc 1812

---

>gb|AF385822.1| Gadus morhua blue-sensitive pigment mRNA, complete cds
          Length = 1440

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 25   ttatttacagttcataaaacg 45
            |||||||||||||||||||||
Sbjct: 1276 ttatttacagttcataaaacg 1256

---

>gb|AE008583.1| Rickettsia conorii str. Malish 7, section 15 of 114 of the complete
            genome
          Length = 10554

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 441  aatcttcgcgagcatgagctcctctgctctctt 473
            ||||||| || ||||||||||||||||| ||||
Sbjct: 9493 aatcttcacgtgcatgagctcctctgctttctt 9461

---

>gb|AC103613.7| Mus musculus chromosome 14, clone RP24-75B12, complete sequence
          Length = 191158

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 192   tgggagaatggagggtccctg 212
             |||||||||||||||||||||
Sbjct: 18632 tgggagaatggagggtccctg 18612

---

>gb|AC156247.2| Xenopus tropicalis clone ISB1-181M9, complete sequence
          Length = 96628

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    tatgcaaaaggttatttacag 34
             |||||||||||||||||||||
Sbjct: 35046 tatgcaaaaggttatttacag 35026

---

>gb|AC156343.2| Xenopus tropicalis clone ISB1-163H16, complete sequence
          Length = 97681

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    tatgcaaaaggttatttacag 34
             |||||||||||||||||||||
Sbjct: 10762 tatgcaaaaggttatttacag 10742

---

>emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in linkage group 14,
            complete sequence
          Length = 211706

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 504  atgcatttattagcagattttctaattct 532
            ||||||||||||||| ||||||| |||||
Sbjct: 8746 atgcatttattagcacattttcttattct 8718

---

>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome
          Length = 1080084

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 440    aaatcttcgcgagcatgagctcctctgct 468
              |||||||| ||||||||||| ||||||||
Sbjct: 584991 aaatcttcacgagcatgagcacctctgct 585019

---

>gb|AC161883.6| Mus musculus BAC clone RP23-91K1 from chromosome 14, complete sequence
          Length = 206274

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    tgggagaatggagggtccctg 212
              |||||||||||||||||||||
Sbjct: 117473 tgggagaatggagggtccctg 117453

---

>emb|AL354740.29| Human DNA sequence from clone RP11-513I15 on chromosome 6 Contains the 5'
              end of the GRM4 gene for glutamate receptor metabotropic 4,
              keratin 18 pseudogene 1 (KRT18P1), a cytochrome c, somatic
              (CYCS) pseudogene, the HMGA1 gene for high mobility group
              AT-hook 1, a ribosomal protein L35 (RPL35) pseudogene, part
              of a novel gene and CpG islands, complete sequence
          Length = 151828

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    gggagaatggagggtccctg 212
              ||||||||||||||||||||
Sbjct: 110411 gggagaatggagggtccctg 110430

---

>gb|AC095034.2| Homo sapiens chromosome 1 clone RP11-545E24, complete sequence
          Length = 170926

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   attatattacagttctgaag 188
             ||||||||||||||||||||
Sbjct: 62837 attatattacagttctgaag 62856

---

>gb|AC095056.3| Homo sapiens BAC clone RP11-373J21 from 4, complete sequence
          Length = 176993

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ttatttacagttcataaaac 44
             ||||||||||||||||||||
Sbjct: 98852 ttatttacagttcataaaac 98833

---

>gb|L17131.1|HUMHMGIY Homo sapiens high mobility group protein (HMG-I(Y)) gene exons 1-8,
            complete cds
          Length = 10144

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 193  gggagaatggagggtccctg 212
            ||||||||||||||||||||
Sbjct: 6821 gggagaatggagggtccctg 6840

---

>emb|CT033768.1| Medicago truncatula chromosome 5 clone mte1-72b19, COMPLETE SEQUENCE
          Length = 121254

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 410   ttcatccacttgtcgtcatctcttgtct 437
             ||||||||||| || |||||||||||||
Sbjct: 59167 ttcatccacttctcatcatctcttgtct 59140

---

>emb|AL133246.3|CNS01DUJ BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 852C13 of
             library RPCI-11 from chromosome 2 of Homo sapiens (Human)
          Length = 222730

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    catcaaaatttggtatgtgt 66
             ||||||||||||||||||||
Sbjct: 22004 catcaaaatttggtatgtgt 21985

---

>gb|AC132131.4| Mus musculus BAC clone RP23-356D16 from 10, complete sequence
          Length = 170192

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   tagcagattttctaattcta 533
             ||||||||||||||||||||
Sbjct: 83943 tagcagattttctaattcta 83924

---

>emb|AL844191.16| Mouse DNA sequence from clone RP23-335E10 on chromosome 4, complete
             sequence
          Length = 49063

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   taattctatggtctctatca 545
             ||||||||||||||||||||
Sbjct: 35691 taattctatggtctctatca 35710

---

>emb|X82582.1|MMIGPE13 M.musculus mRNA for immunoglobulin heavy chain, V region (pe13)
          Length = 363

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 tggagggtccctgaaatttt 219
           ||||||||||||||||||||
Sbjct: 39  tggagggtccctgaaatttt 58


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,802,043
Number of Sequences: 3902068
Number of extensions: 4802043
Number of successful extensions: 92077
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 91963
Number of HSP's gapped (non-prelim): 96
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---