>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2161

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 111  PPPTPRKACTPSKTDPIHI*ENQVR*LC*IRPPSP 215
            PPP+PR++  PS T P    EN +  L  + PP+P
Sbjct: 1519 PPPSPRRSVPPSPTSPRASEENGLP-LLVLPPPAP 1552

>ESR1_ONCMY (P16058) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
          Length = 622

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 110 TATHTS*GLHPFKNGSDTHIREPGTVAL 193
           T T T   + P +   DTHIR PG+  L
Sbjct: 582 TTTSTGSSIGPMRGSQDTHIRSPGSGVL 609

>LPPX_MYCTU (P65306) Putative lipoprotein lppX precursor|
          Length = 233

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 186 TVPGSLICVSDPFLKGCRPYEVWVAV*GT 100
           T+P S + + DP  K  RP  VW+A  G+
Sbjct: 176 TIPASSVKMLDPGAKSARPATVWIAQDGS 204

>LPPX_MYCBO (P65307) Putative lipoprotein lppX precursor|
          Length = 233

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 186 TVPGSLICVSDPFLKGCRPYEVWVAV*GT 100
           T+P S + + DP  K  RP  VW+A  G+
Sbjct: 176 TIPASSVKMLDPGAKSARPATVWIAQDGS 204

>ESR1_SALSA (P50242) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
           (Fragment)
          Length = 535

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 110 TATHTS*GLHPFKNGSDTHIREPGTVAL 193
           T T T   + P +   DTHIR PG+  L
Sbjct: 495 TTTSTGSSIGPMRGSQDTHIRSPGSGVL 522

>TRMD_BACSU (O31741) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)|
           (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
          Length = 243

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 52  PTTIKSEVAHNNDTQSSPLNRHPHLVRPA 138
           P  +  E +H  D+ S+ L  HPH  RPA
Sbjct: 157 PGVLGKEASHIEDSFSTGLLEHPHYTRPA 185

>ATM_ASHGO (Q751J3) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase TEL1) (Telomere length
            regulation protein 1) (ATM homolog)
          Length = 2768

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 245  LREML*VVLDLGAFFLACLLGTEFFMPRKKRRAPNSARFCVNFMK 379
            L++   V  ++G  ++ACLL  EF M       PN AR  V +MK
Sbjct: 1709 LQDAYKVAAEVGEKYIACLLFEEFHM-------PNLARLDVTYMK 1746


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,344,432
Number of Sequences: 219361
Number of extensions: 1290102
Number of successful extensions: 4127
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4117
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)