ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags19n16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105237.1| Zea mays PCO145474 mRNA sequence Length = 1683 Score = 133 bits (67), Expect = 7e-28 Identities = 133/155 (85%) Strand = Plus / Minus Query: 445 agctgctcgacccggctcgcgatatgtttgccataggtgtacttcctcagtgcttgcaag 504 ||||||||||| ||||| |||| || ||||| || ||||||||||||| |||||||| Sbjct: 1316 agctgctcgactcggcttacgatgtgcttgccgtatgtgtacttcctcaatgcttgcata 1257 Query: 505 tgaccctttacacggctgaccagaagttcccgctgctcatcgttgcatgtttcaagtatc 564 ||| ||||||| ||||||| |||||| |||||||| || |||||||| |||||||||||| Sbjct: 1256 tgatcctttacgcggctgagcagaagctcccgctgatcctcgttgcaagtttcaagtatc 1197 Query: 565 ttctgaacaacataattagcgtactgatccttcat 599 ||||| || || |||||||| ||||| |||||||| Sbjct: 1196 ttctggaccacgtaattagcatactggtccttcat 1162
>ref|XM_483360.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3586 Score = 117 bits (59), Expect = 4e-23 Identities = 144/171 (84%), Gaps = 1/171 (0%) Strand = Plus / Minus Query: 429 tctccttcaccgcaaaagctgctcgacccggctcgcgatatgtttgccataggtgtactt 488 ||||||||||| |||| | ||||| || |||||| | ||||| ||||||||||||||||| Sbjct: 3246 tctccttcaccacaaa-gttgctcaactcggctcacaatatgcttgccataggtgtactt 3188 Query: 489 cctcagtgcttgcaagtgaccctttacacggctgaccagaagttcccgctgctcatcgtt 548 ||| | |||||||| || ||||| |||||||||| ||| || || | ||| | ||||| Sbjct: 3187 ccttaatgcttgcagatggcccttcacacggctgagcaggagctctctctgttgctcgtt 3128 Query: 549 gcatgtttcaagtatcttctgaacaacataattagcgtactgatccttcat 599 |||||||||||||||||||||||| ||||| || || ||||| |||||||| Sbjct: 3127 gcatgtttcaagtatcttctgaactacatagtttgcatactggtccttcat 3077 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 46 aagcaagcaattacattaccaagcagtc 73 |||||||| ||||||||||||||||||| Sbjct: 3571 aagcaagcgattacattaccaagcagtc 3544 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 ccctaacatagatacactgatgc 205 ||||||||||||||||||||||| Sbjct: 3451 ccctaacatagatacactgatgc 3429
>dbj|AK121539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031I02, full insert sequence Length = 3828 Score = 117 bits (59), Expect = 4e-23 Identities = 144/171 (84%), Gaps = 1/171 (0%) Strand = Plus / Minus Query: 429 tctccttcaccgcaaaagctgctcgacccggctcgcgatatgtttgccataggtgtactt 488 ||||||||||| |||| | ||||| || |||||| | ||||| ||||||||||||||||| Sbjct: 3372 tctccttcaccacaaa-gttgctcaactcggctcacaatatgcttgccataggtgtactt 3314 Query: 489 cctcagtgcttgcaagtgaccctttacacggctgaccagaagttcccgctgctcatcgtt 548 ||| | |||||||| || ||||| |||||||||| ||| || || | ||| | ||||| Sbjct: 3313 ccttaatgcttgcagatggcccttcacacggctgagcaggagctctctctgttgctcgtt 3254 Query: 549 gcatgtttcaagtatcttctgaacaacataattagcgtactgatccttcat 599 |||||||||||||||||||||||| ||||| || || ||||| |||||||| Sbjct: 3253 gcatgtttcaagtatcttctgaactacatagtttgcatactggtccttcat 3203 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 46 aagcaagcaattacattaccaagcagtc 73 |||||||| ||||||||||||||||||| Sbjct: 3697 aagcaagcgattacattaccaagcagtc 3670 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 ccctaacatagatacactgatgc 205 ||||||||||||||||||||||| Sbjct: 3577 ccctaacatagatacactgatgc 3555
>dbj|AK064999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E01, full insert sequence Length = 3586 Score = 117 bits (59), Expect = 4e-23 Identities = 144/171 (84%), Gaps = 1/171 (0%) Strand = Plus / Minus Query: 429 tctccttcaccgcaaaagctgctcgacccggctcgcgatatgtttgccataggtgtactt 488 ||||||||||| |||| | ||||| || |||||| | ||||| ||||||||||||||||| Sbjct: 3246 tctccttcaccacaaa-gttgctcaactcggctcacaatatgcttgccataggtgtactt 3188 Query: 489 cctcagtgcttgcaagtgaccctttacacggctgaccagaagttcccgctgctcatcgtt 548 ||| | |||||||| || ||||| |||||||||| ||| || || | ||| | ||||| Sbjct: 3187 ccttaatgcttgcagatggcccttcacacggctgagcaggagctctctctgttgctcgtt 3128 Query: 549 gcatgtttcaagtatcttctgaacaacataattagcgtactgatccttcat 599 |||||||||||||||||||||||| ||||| || || ||||| |||||||| Sbjct: 3127 gcatgtttcaagtatcttctgaactacatagtttgcatactggtccttcat 3077 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 46 aagcaagcaattacattaccaagcagtc 73 |||||||| ||||||||||||||||||| Sbjct: 3571 aagcaagcgattacattaccaagcagtc 3544 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 ccctaacatagatacactgatgc 205 ||||||||||||||||||||||| Sbjct: 3451 ccctaacatagatacactgatgc 3429
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 113 bits (57), Expect = 7e-22 Identities = 132/157 (84%) Strand = Plus / Minus Query: 443 aaagctgctcgacccggctcgcgatatgtttgccataggtgtacttcctcagtgcttgca 502 |||| ||||| || |||||| | ||||| |||||||||||||||||||| | |||||||| Sbjct: 25836717 aaagttgctcaactcggctcacaatatgcttgccataggtgtacttccttaatgcttgca 25836658 Query: 503 agtgaccctttacacggctgaccagaagttcccgctgctcatcgttgcatgtttcaagta 562 || ||||| |||||||||| ||| || || | ||| | ||||||||||||||||||| Sbjct: 25836657 gatggcccttcacacggctgagcaggagctctctctgttgctcgttgcatgtttcaagta 25836598 Query: 563 tcttctgaacaacataattagcgtactgatccttcat 599 |||||||||| ||||| || || ||||| |||||||| Sbjct: 25836597 tcttctgaactacatagtttgcatactggtccttcat 25836561 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 46 aagcaagcaattacattaccaagcagtc 73 |||||||| ||||||||||||||||||| Sbjct: 25837163 aagcaagcgattacattaccaagcagtc 25837136 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 ccctaacatagatacactgatgc 205 ||||||||||||||||||||||| Sbjct: 25837043 ccctaacatagatacactgatgc 25837021
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 113 bits (57), Expect = 7e-22 Identities = 132/157 (84%) Strand = Plus / Minus Query: 443 aaagctgctcgacccggctcgcgatatgtttgccataggtgtacttcctcagtgcttgca 502 |||| ||||| || |||||| | ||||| |||||||||||||||||||| | |||||||| Sbjct: 22504 aaagttgctcaactcggctcacaatatgcttgccataggtgtacttccttaatgcttgca 22445 Query: 503 agtgaccctttacacggctgaccagaagttcccgctgctcatcgttgcatgtttcaagta 562 || ||||| |||||||||| ||| || || | ||| | ||||||||||||||||||| Sbjct: 22444 gatggcccttcacacggctgagcaggagctctctctgttgctcgttgcatgtttcaagta 22385 Query: 563 tcttctgaacaacataattagcgtactgatccttcat 599 |||||||||| ||||| || || ||||| |||||||| Sbjct: 22384 tcttctgaactacatagtttgcatactggtccttcat 22348 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 46 aagcaagcaattacattaccaagcagtc 73 |||||||| ||||||||||||||||||| Sbjct: 22950 aagcaagcgattacattaccaagcagtc 22923 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 ccctaacatagatacactgatgc 205 ||||||||||||||||||||||| Sbjct: 22830 ccctaacatagatacactgatgc 22808
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 113 bits (57), Expect = 7e-22 Identities = 132/157 (84%) Strand = Plus / Minus Query: 443 aaagctgctcgacccggctcgcgatatgtttgccataggtgtacttcctcagtgcttgca 502 |||| ||||| || |||||| | ||||| |||||||||||||||||||| | |||||||| Sbjct: 108928 aaagttgctcaactcggctcacaatatgcttgccataggtgtacttccttaatgcttgca 108869 Query: 503 agtgaccctttacacggctgaccagaagttcccgctgctcatcgttgcatgtttcaagta 562 || ||||| |||||||||| ||| || || | ||| | ||||||||||||||||||| Sbjct: 108868 gatggcccttcacacggctgagcaggagctctctctgttgctcgttgcatgtttcaagta 108809 Query: 563 tcttctgaacaacataattagcgtactgatccttcat 599 |||||||||| ||||| || || ||||| |||||||| Sbjct: 108808 tcttctgaactacatagtttgcatactggtccttcat 108772 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 46 aagcaagcaattacattaccaagcagtc 73 |||||||| ||||||||||||||||||| Sbjct: 109374 aagcaagcgattacattaccaagcagtc 109347 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 ccctaacatagatacactgatgc 205 ||||||||||||||||||||||| Sbjct: 109254 ccctaacatagatacactgatgc 109232
>gb|AY105814.1| Zea mays PCO145471 mRNA sequence Length = 912 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 482 tgtacttcctcagtgcttgcaagtgaccctttacacggctgaccagaagttcccgctgct 541 |||||||||||| |||||||| ||| ||||| |||||||||||||| ||||||||||| | Sbjct: 912 tgtacttcctcaatgcttgcatgtggcccttgacacggctgaccaggagttcccgctggt 853 Query: 542 catcgttgcatgtttcaagtatcttctgaacaacataattagcgtactgatccttcat 599 || ||||||||||| ||||||||||| || || ||||| || ||||| |||||||| Sbjct: 852 tctcattgcatgtttcgagtatcttctggaccacgtaattcgcatactggtccttcat 795
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 547 ttgcatgtttcaagtatcttctgaacaacataattagcgtactgatccttcat 599 ||||||||| ||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 18929866 ttgcatgttgtaagcatcttctgtaccacataattagcatactggtccttcat 18929918
>dbj|AK070870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075A04, full insert sequence Length = 3589 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 547 ttgcatgtttcaagtatcttctgaacaacataattagcgtactgatccttcat 599 ||||||||| ||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 3062 ttgcatgttgtaagcatcttctgtaccacataattagcatactggtccttcat 3010
>gb|AF153276.1|AF153276 Populus tremula x Populus tremuloides pumilio domain-containing protein PPD1 (PPD1) mRNA, complete cds Length = 3474 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 547 ttgcatgtttcaagtatcttctgaacaacataatt 581 |||| ||||||||||||||| || ||||||||||| Sbjct: 3032 ttgcttgtttcaagtatcttttggacaacataatt 2998
>gb|AC116136.9| Mus musculus chromosome 5, clone RP23-116G17, complete sequence Length = 212184 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 85 aaaaacatatatgtatcacacacaca 110 ||||| |||||||||||||||||||| Sbjct: 65060 aaaaatatatatgtatcacacacaca 65035
>gb|AY365046.1| Pan troglodytes BRCA1 (BRCA1) gene, complete cds Length = 80966 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 85 aaaaacatatatgtatcacacacaca 110 ||||| |||||||||||||||||||| Sbjct: 13695 aaaaatatatatgtatcacacacaca 13670
>gb|AY589042.1| Gorilla gorilla breast cancer type 1 (BRCA1) gene, complete cds Length = 81346 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 85 aaaaacatatatgtatcacacacaca 110 ||||| |||||||||||||||||||| Sbjct: 14030 aaaaatatatatgtatcacacacaca 14005
>gb|AY589040.1| Pongo pygmaeus breast cancer type 1 (BRCA1) gene, complete cds Length = 83366 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 85 aaaaacatatatgtatcacacacaca 110 ||||| |||||||||||||||||||| Sbjct: 15194 aaaaatatatatgtatcacacacaca 15169
>ref|XM_873366.1| PREDICTED: Bos taurus similar to pumilio homolog 2, transcript variant 8 (LOC540170), mRNA Length = 5859 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 2571 atcttctgaacgacataattggcatactggtccttcat 2534
>ref|XM_592016.2| PREDICTED: Bos taurus similar to pumilio homolog 2, transcript variant 6 (LOC540170), mRNA Length = 4385 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 1097 atcttctgaacgacataattggcatactggtccttcat 1060
>ref|XM_864456.1| PREDICTED: Bos taurus similar to pumilio homolog 2, transcript variant 7 (LOC540170), mRNA Length = 6120 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 2832 atcttctgaacgacataattggcatactggtccttcat 2795
>gb|BC041773.1| Mus musculus pumilio 2 (Drosophila), mRNA (cDNA clone MGC:31021 IMAGE:3986207), complete cds Length = 3295 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 2809 atcttctgaaccacatagttggcatactgatccttcat 2772
>ref|XM_978653.1| PREDICTED: Mus musculus pumilio 2 (Drosophila), transcript variant 5 (Pum2), mRNA Length = 1692 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 1345 atcttctgaaccacatagttggcatactgatccttcat 1308
>ref|XM_978774.1| PREDICTED: Mus musculus pumilio 2 (Drosophila), transcript variant 4 (Pum2), mRNA Length = 3502 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3155 atcttctgaaccacatagttggcatactgatccttcat 3118
>ref|XM_978734.1| PREDICTED: Mus musculus pumilio 2 (Drosophila), transcript variant 3 (Pum2), mRNA Length = 3581 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3234 atcttctgaaccacatagttggcatactgatccttcat 3197
>ref|XM_978894.1| PREDICTED: Mus musculus pumilio 2 (Drosophila), transcript variant 7 (Pum2), mRNA Length = 3270 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 2923 atcttctgaaccacatagttggcatactgatccttcat 2886
>ref|XM_978808.1| PREDICTED: Mus musculus pumilio 2 (Drosophila), transcript variant 8 (Pum2), mRNA Length = 3489 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3142 atcttctgaaccacatagttggcatactgatccttcat 3105
>ref|XM_979014.1| PREDICTED: Mus musculus pumilio 2 (Drosophila), transcript variant 2 (Pum2), mRNA Length = 5905 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3072 atcttctgaaccacatagttggcatactgatccttcat 3035
>ref|XM_978977.1| PREDICTED: Mus musculus pumilio 2 (Drosophila), transcript variant 10 (Pum2), mRNA Length = 3441 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3094 atcttctgaaccacatagttggcatactgatccttcat 3057
>ref|XM_978945.1| PREDICTED: Mus musculus pumilio 2 (Drosophila), transcript variant 9 (Pum2), mRNA Length = 3507 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3160 atcttctgaaccacatagttggcatactgatccttcat 3123
>ref|XM_852972.1| PREDICTED: Canis familiaris similar to pumilio homolog 2, transcript variant 6 (LOC607618), mRNA Length = 6351 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 3286 atcttctgaaccacataattggcatactggtccttcat 3249
>ref|XM_852930.1| PREDICTED: Canis familiaris similar to pumilio homolog 2, transcript variant 5 (LOC607618), mRNA Length = 6108 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 3043 atcttctgaaccacataattggcatactggtccttcat 3006
>ref|XM_852888.1| PREDICTED: Canis familiaris similar to pumilio homolog 2, transcript variant 4 (LOC607618), mRNA Length = 6330 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 3265 atcttctgaaccacataattggcatactggtccttcat 3228
>ref|XM_852845.1| PREDICTED: Canis familiaris similar to pumilio homolog 2, transcript variant 3 (LOC607618), mRNA Length = 6357 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 3292 atcttctgaaccacataattggcatactggtccttcat 3255
>ref|XM_852804.1| PREDICTED: Canis familiaris similar to pumilio homolog 2, transcript variant 2 (LOC607618), mRNA Length = 4593 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 1528 atcttctgaaccacataattggcatactggtccttcat 1491
>ref|XM_843995.1| PREDICTED: Canis familiaris similar to pumilio homolog 2, transcript variant 1 (LOC607618), mRNA Length = 6366 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 3280 atcttctgaaccacataattggcatactggtccttcat 3243
>gb|AC110382.3| Mus musculus BAC clone RP24-555I16 from chromosome 12, complete sequence Length = 170164 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 148741 atcttctgaaccacatagttggcatactgatccttcat 148704
>gb|BC050747.1| Mus musculus pumilio 1 (Drosophila), mRNA (cDNA clone MGC:58112 IMAGE:6593374), complete cds Length = 4037 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 3476 atcttctggaccacatagttagcatactgatccttcat 3439
>gb|AC154906.3| Mus musculus BAC clone RP23-344H23 from chromosome 12, complete sequence Length = 205985 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 77617 atcttctgaaccacatagttggcatactgatccttcat 77580
>dbj|AB211230.2| Oncorhynchus mykiss Ompum1 mRNA for pumilio-1, partial cds Length = 3762 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || |||||||| |||||||| Sbjct: 3303 atcttctgaaccacatagttggcgtactggtccttcat 3266
>ref|NM_030722.1| Mus musculus pumilio 1 (Drosophila) (Pum1), mRNA Length = 5029 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 3482 atcttctggaccacatagttagcatactgatccttcat 3445
>dbj|AK141921.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130063J01 product:pumilio 1 (Drosophila), full insert sequence Length = 5319 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 3509 atcttctggaccacatagttagcatactgatccttcat 3472
>dbj|AK134185.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830468I10 product:pumilio 2 (Drosophila), full insert sequence Length = 4982 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3071 atcttctgaaccacatagttggcatactgatccttcat 3034
>dbj|AK141682.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030020M23 product:pumilio 2 (Drosophila), full insert sequence Length = 5103 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3119 atcttctgaaccacatagttggcatactgatccttcat 3082
>ref|NM_030723.1| Mus musculus pumilio 2 (Drosophila) (Pum2), mRNA Length = 4000 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3203 atcttctgaaccacatagttggcatactgatccttcat 3166
>dbj|AK147185.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920195H24 product:pumilio 1 (Drosophila), full insert sequence Length = 4586 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 2749 atcttctggaccacatagttagcatactgatccttcat 2712
>dbj|AK154059.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430031D14 product:pumilio 1 (Drosophila), full insert sequence Length = 3721 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 3101 atcttctggaccacatagttagcatactgatccttcat 3064
>dbj|AK161357.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930463P09 product:pumilio 2 (Drosophila), full insert sequence Length = 2231 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 1428 atcttctgaaccacatagttggcatactgatccttcat 1391
>dbj|AK161135.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732465P08 product:pumilio 1 (Drosophila), full insert sequence Length = 4535 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 3215 atcttctggaccacatagttagcatactgatccttcat 3178
>dbj|AK147617.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1092I08 product:pumilio 2 (Drosophila), full insert sequence Length = 6220 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3205 atcttctgaaccacatagttggcatactgatccttcat 3168
>dbj|AK163977.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330024P05 product:pumilio 1 (Drosophila), full insert sequence Length = 4120 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 3500 atcttctggaccacatagttagcatactgatccttcat 3463
>dbj|AK163964.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330013P12 product:pumilio 2 (Drosophila), full insert sequence Length = 3588 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 2810 atcttctgaaccacatagttggcatactgatccttcat 2773
>dbj|AK162742.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130009G24 product:pumilio 1 (Drosophila), full insert sequence Length = 4478 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 3199 atcttctggaccacatagttagcatactgatccttcat 3162
>gb|BC013765.1| Mus musculus pumilio 2 (Drosophila), mRNA (cDNA clone IMAGE:3595161), partial cds Length = 3477 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 438 atcttctgaaccacatagttggcatactgatccttcat 401
>dbj|AK048119.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130035P13 product:pumilio 2 (Drosophila), full insert sequence Length = 2886 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 2126 atcttctgaaccacatagttggcatactgatccttcat 2089
>gb|AY027917.1| Mus musculus PUM1 (Pum1) mRNA, complete cds Length = 3569 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3103 atcttctgaaccacatagttggcatactgatccttcat 3066
>ref|NM_001039292.1| Gallus gallus pumilio 2 (PUM2), mRNA Length = 3329 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||||||||| || || ||||| |||||||| Sbjct: 3029 atcttctgaacaacatagttggcatactggtccttcat 2992
>ref|XM_342928.2| PREDICTED: Rattus norvegicus pumilio 1 (Drosophila) (predicted) (Pum1_predicted), mRNA Length = 4164 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || |||||||| || |||||||||||||| Sbjct: 3638 atcttctggaccacataattggcatactgatccttcat 3601
>gb|AF315590.1| Mus musculus Pumilio 2 (Pumm2) mRNA, complete cds Length = 4000 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3203 atcttctgaaccacatagttggcatactgatccttcat 3166
>gb|AF321909.1| Mus musculus pumilio 1 (Pumm1) mRNA, complete cds Length = 5029 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 3482 atcttctggaccacatagttagcatactgatccttcat 3445
>emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, complete sequence Length = 166110 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 37 taagcaagcaagcaagcaatta 58 |||||||||||||||||||||| Sbjct: 38896 taagcaagcaagcaagcaatta 38917
>gb|BC048174.1| Mus musculus pumilio 1 (Drosophila), mRNA (cDNA clone MGC:61243 IMAGE:6825203), complete cds Length = 4002 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 3462 atcttctggaccacatagttagcatactgatccttcat 3425
>dbj|AK122225.1| Mus musculus mRNA for mKIAA0235 protein Length = 3570 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||| ||||| || || |||||||||||||| Sbjct: 3105 atcttctgaaccacatagttggcatactgatccttcat 3068
>dbj|AK122205.1| Mus musculus mRNA for mKIAA0099 protein Length = 5329 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 3492 atcttctggaccacatagttagcatactgatccttcat 3455
>gb|DQ275192.1| Gallus gallus pumilio 2 (pum2) mRNA, complete cds Length = 3329 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 ||||||||||||||||| || || ||||| |||||||| Sbjct: 3029 atcttctgaacaacatagttggcatactggtccttcat 2992
>emb|AL627104.16| Mouse DNA sequence from clone RP23-412B2 on chromosome 4, complete sequence Length = 193363 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 562 atcttctgaacaacataattagcgtactgatccttcat 599 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 23840 atcttctggaccacatagttagcatactgatccttcat 23803
>ref|XM_950467.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU09_0080) partial mRNA Length = 417 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 gttttattacataactggaga 34 ||||||||||||||||||||| Sbjct: 60 gttttattacataactggaga 80
>gb|AC116502.11| Mus musculus chromosome 13, clone RP24-300G17, complete sequence Length = 170654 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 catatatgtatcacacacaca 110 ||||||||||||||||||||| Sbjct: 79158 catatatgtatcacacacaca 79178
>gb|AC131190.3| Mus musculus BAC clone RP24-332E15 from chromosome 5, complete sequence Length = 176925 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tttaagcaagcaagcaagcaa 55 ||||||||||||||||||||| Sbjct: 151898 tttaagcaagcaagcaagcaa 151878
>gb|AC132293.3| Mus musculus BAC clone RP24-322H1 from chromosome 1, complete sequence Length = 158294 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaattacatt 62 ||||||||||||||||||| ||||| Sbjct: 30589 aagcaagcaagcaagcaatcacatt 30565
>gb|AC125537.4| Mus musculus BAC clone RP24-165M1 from chromosome 12, complete sequence Length = 167744 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatta 58 ||||||||||||||||||||| Sbjct: 78417 aagcaagcaagcaagcaatta 78437
>gb|AC117623.7| Mus musculus chromosome 1, clone RP23-114L12, complete sequence Length = 211821 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaattacatt 62 ||||||||||||||||||| ||||| Sbjct: 122756 aagcaagcaagcaagcaatcacatt 122732
>emb|AL627433.3| Human DNA sequence from clone RP11-331L19 on chromosome 13, complete sequence Length = 35052 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 acatatatgtatcacacacac 109 ||||||||||||||||||||| Sbjct: 23570 acatatatgtatcacacacac 23590
>emb|AL591047.6| Human DNA sequence from clone RP13-467P9 on chromosome 6, complete sequence Length = 54456 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tttaagcaagcaagcaagcaa 55 ||||||||||||||||||||| Sbjct: 27728 tttaagcaagcaagcaagcaa 27708
>gb|AC129886.3| Atelerix albiventris clone LB4-234A16, complete sequence Length = 176448 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tttaagcaagcaagcaagcaa 55 ||||||||||||||||||||| Sbjct: 141254 tttaagcaagcaagcaagcaa 141234
>emb|BX883052.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 11/11 Length = 349381 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 acatatatgtatcacacacac 109 ||||||||||||||||||||| Sbjct: 208014 acatatatgtatcacacacac 207994
>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17, complete sequence Length = 193986 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatta 58 ||||||||||||||||||||| Sbjct: 156585 aagcaagcaagcaagcaatta 156565
>emb|AL606522.6| Mouse DNA sequence from clone RP23-19L22 on chromosome 11 Contains the Actr2 gene for ARP2 actin-related protein 2 homolog (yeast), a small nuclear ribonucleoprotein polypeptide G (Snrpg) pseudogene, two novel genes, the Rab1 gene for RAB1, member RAS oncogene family and three CpG islands, complete sequence Length = 203071 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tttaagcaagcaagcaagcaa 55 ||||||||||||||||||||| Sbjct: 43018 tttaagcaagcaagcaagcaa 43038
>gb|AC110004.2| Homo sapiens chromosome 5 clone RP11-265I24, complete sequence Length = 117879 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tttaagcaagcaagcaagcaa 55 ||||||||||||||||||||| Sbjct: 90371 tttaagcaagcaagcaagcaa 90351
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tttaagcaagcaagcaagcaa 55 ||||||||||||||||||||| Sbjct: 750526 tttaagcaagcaagcaagcaa 750506
>gb|AC008685.8| Homo sapiens chromosome 5 clone CTB-59H21, complete sequence Length = 159713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tttaagcaagcaagcaagcaa 55 ||||||||||||||||||||| Sbjct: 15596 tttaagcaagcaagcaagcaa 15576
>gb|AC154450.3| Mus musculus BAC clone RP24-169J2 from chromosome 12, complete sequence Length = 168477 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tttaagcaagcaagcaagcaa 55 ||||||||||||||||||||| Sbjct: 36537 tttaagcaagcaagcaagcaa 36517
>gb|AC013509.5|AC013509 Homo sapiens chromosome , clone RP11-115I9, complete sequence Length = 151544 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 aagcaagcaagcaattacatt 62 ||||||||||||||||||||| Sbjct: 12565 aagcaagcaagcaattacatt 12545
>gb|DQ008837.1| Podocarpus macrophyllus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3014 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tttaagcaagcaagcaagcaa 55 ||||||||||||||||||||| Sbjct: 1533 tttaagcaagcaagcaagcaa 1513
>emb|BX465859.13| Zebrafish DNA sequence from clone DKEYP-67G10 in linkage group 4, complete sequence Length = 214205 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatta 58 ||||||||||||||||||||| Sbjct: 27757 aagcaagcaagcaagcaatta 27737
>gb|AC010132.5|AC010132 Homo sapiens BAC clone RP11-111K18 from 7p11.2-p2, complete sequence Length = 166680 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 acatatatgtatcacacacac 109 ||||||||||||||||||||| Sbjct: 136292 acatatatgtatcacacacac 136312
>gb|AC011716.7|AC011716 Homo sapiens chromosome 8 clone RP11-65D13, complete sequence Length = 172327 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aagcaagcaagcaattacatt 62 ||||||||||||||||||||| Sbjct: 21268 aagcaagcaagcaattacatt 21288
>emb|BX005472.11| Zebrafish DNA sequence from clone CH211-119C22 in linkage group 11, complete sequence Length = 158170 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatta 58 ||||||||||||||||||||| Sbjct: 32360 aagcaagcaagcaagcaatta 32380
>emb|BX005468.9| Mouse DNA sequence from clone RP23-142E21 on chromosome X, complete sequence Length = 217179 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatta 58 ||||||||||||||||||||| Sbjct: 188220 aagcaagcaagcaagcaatta 188240
>emb|AL954171.10| Zebrafish DNA sequence from clone CH211-284B7 in linkage group 2, complete sequence Length = 148854 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 taagcaagcaagcaagcaattacat 61 ||||||||||||||||||| ||||| Sbjct: 21107 taagcaagcaagcaagcaaatacat 21083
>gb|AC124395.5| Mus musculus BAC clone RP24-342J3 from 13, complete sequence Length = 147971 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tttaagcaagcaagcaagcaa 55 ||||||||||||||||||||| Sbjct: 114039 tttaagcaagcaagcaagcaa 114019
>emb|BX248111.7| Zebrafish DNA sequence from clone DKEY-22L11 in linkage group 4, complete sequence Length = 185023 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatta 58 ||||||||||||||||||||| Sbjct: 71954 aagcaagcaagcaagcaatta 71974
>emb|AL590451.2|CNS07EGI chromosome IX of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 251002 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 gttttattacataactggaga 34 ||||||||||||||||||||| Sbjct: 9579 gttttattacataactggaga 9599
>gb|AF034897.1|AF034897 Rattus norvegicus olfactory receptor-like protein (SCR D-8) gene, complete cds Length = 1325 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 catatatgtatcacacacaca 110 ||||||||||||||||||||| Sbjct: 71 catatatgtatcacacacaca 91
>gb|AC132618.3| Mus musculus BAC clone RP23-238K12 from 6, complete sequence Length = 155828 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatta 58 ||||||||||||||||||||| Sbjct: 76226 aagcaagcaagcaagcaatta 76206
>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence Length = 207157 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatta 58 ||||||||||||||||||||| Sbjct: 104688 aagcaagcaagcaagcaatta 104708
>emb|CT030646.6| Mouse DNA sequence from clone RP23-222A16 on chromosome 13, complete sequence Length = 195169 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatta 58 ||||||||||||||||||||| Sbjct: 167991 aagcaagcaagcaagcaatta 168011
>gb|AC171197.1| Mus musculus BAC clone RP23-216J7 from chromosome 5, complete sequence Length = 211677 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tttaagcaagcaagcaagcaa 55 ||||||||||||||||||||| Sbjct: 64922 tttaagcaagcaagcaagcaa 64902
>gb|AC110252.25| Mus musculus chromosome 6, clone RP23-267G12, complete sequence Length = 172806 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 130052 ttaagcaagcaagcaagcaa 130033
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gctgctcgacccggctcgcg 465 |||||||||||||||||||| Sbjct: 3224388 gctgctcgacccggctcgcg 3224407
>gb|AC109272.20| Mus musculus chromosome 7, clone RP23-354L18, complete sequence Length = 202993 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 taagcaagcaagcaagcaat 56 |||||||||||||||||||| Sbjct: 18959 taagcaagcaagcaagcaat 18978
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 caagtgaccctttacacggc 520 |||||||||||||||||||| Sbjct: 1565066 caagtgaccctttacacggc 1565085
>gb|AC108399.11| Mus musculus chromosome 19, clone RP24-375O7, complete sequence Length = 180312 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 39693 aagcaagcaagcaagcaatt 39712
>gb|AC137978.8| Mus musculus chromosome 1, clone RP24-468M12, complete sequence Length = 181633 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tatatgtatcacacacacaa 111 |||||||||||||||||||| Sbjct: 160764 tatatgtatcacacacacaa 160783
>gb|AC148991.2| Mus musculus BAC clone RP23-52N2 from chromosome 19, complete sequence Length = 221043 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 215875 ttaagcaagcaagcaagcaa 215894
>gb|AC131725.2| Mus musculus BAC clone RP23-129H16 from chromosome 5, complete sequence Length = 203437 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 78810 ttaagcaagcaagcaagcaa 78829
>gb|AC158619.12| Mus musculus 10 BAC RP23-291O3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250421 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 acatatgtacaatcttcctt 272 |||||||||||||||||||| Sbjct: 193923 acatatgtacaatcttcctt 193904
>gb|AC147380.2| Mus musculus BAC clone RP24-119J10 from chromosome 17, complete sequence Length = 156475 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 69434 ttaagcaagcaagcaagcaa 69415
>gb|AC140927.2| Mus musculus BAC clone RP23-409D19 from chromosome 5, complete sequence Length = 209257 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 134968 ttaagcaagcaagcaagcaa 134987
>gb|AC127551.7| Mus musculus BAC clone RP24-547H23 from chromosome 8, complete sequence Length = 204342 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 76214 ttaagcaagcaagcaagcaa 76195
>gb|AC161595.3| Mus musculus BAC clone RP23-471H21 from chromosome 9, complete sequence Length = 189223 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 136781 ttaagcaagcaagcaagcaa 136762
>gb|AC163498.3| Mus musculus chromosome 1, clone RP23-86J11, complete sequence Length = 192061 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 cataactggagatttaagcaagca 46 ||||||||||||||||| |||||| Sbjct: 148234 cataactggagatttaaacaagca 148211
>gb|AY811134.1| Schistosoma japonicum SJCHGC07942 protein mRNA, partial cds Length = 561 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 568 tgaacaacataattagcgtactgatccttcat 599 |||||||||||||| || |||||||| ||||| Sbjct: 453 tgaacaacataatttgcatactgatctttcat 422
>gb|AC158138.13| Mus musculus chromosome 7, clone RP23-26C21, complete sequence Length = 232699 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 149961 ttaagcaagcaagcaagcaa 149942
>gb|AC132284.5| Mus musculus BAC clone RP24-351O18 from chromosome 5, complete sequence Length = 174681 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 45562 atatatgtatcacacacaca 45581
>gb|AC157218.13| Mus musculus 6 BAC RP24-200A9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173704 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 82733 ttaagcaagcaagcaagcaa 82714
>gb|AC124374.5| Mus musculus BAC clone RP24-567K8 from chromosome 5, complete sequence Length = 181395 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 108437 ttaagcaagcaagcaagcaa 108418
>gb|AC103894.3| Papio anubis clone RP41-312D4, complete sequence Length = 124063 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 acatatatgtatcacacaca 108 |||||||||||||||||||| Sbjct: 3954 acatatatgtatcacacaca 3935
>gb|AC141481.4| Mus musculus BAC clone RP23-145E16 from chromosome 15, complete sequence Length = 195197 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 taagcaagcaagcaagcaat 56 |||||||||||||||||||| Sbjct: 26061 taagcaagcaagcaagcaat 26080
>gb|AC132402.3| Mus musculus BAC clone RP23-404I24 from chromosome 19, complete sequence Length = 217490 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 102729 ttaagcaagcaagcaagcaa 102748
>gb|AC117662.13| Mus musculus chromosome 16, clone RP23-351D19, complete sequence Length = 293822 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 270615 aagcaagcaagcaagcaatt 270596
>gb|AC110524.11| Mus musculus chromosome 9, clone RP23-403L22, complete sequence Length = 225122 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 161615 aagcaagcaagcaagcaatt 161596
>gb|AC125375.3| Mus musculus BAC clone RP23-464K21 from chromosome 14, complete sequence Length = 198193 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 187443 atatatgtatcacacacaca 187462
>gb|AC129212.4| Mus musculus BAC clone RP24-373G21 from chromosome 15, complete sequence Length = 174846 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 taagcaagcaagcaagcaat 56 |||||||||||||||||||| Sbjct: 142657 taagcaagcaagcaagcaat 142676
>gb|AC140053.4| Mus musculus BAC clone RP23-258J2 from chromosome 19, complete sequence Length = 186595 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 89556 ttaagcaagcaagcaagcaa 89537
>emb|CR774185.17| Zebrafish DNA sequence from clone CH211-237H18 in linkage group 13, complete sequence Length = 154017 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 73972 atatatgtatcacacacaca 73953
>gb|AE014303.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 3 of 3 of the complete sequence Length = 209806 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 28981 atatatgtatcacacacaca 29000
>gb|AC122274.4| Mus musculus BAC clone RP23-228J3 from 14, complete sequence Length = 192135 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 51714 atatatgtatcacacacaca 51695
>gb|AC112144.4| Mus musculus BAC clone RP23-32B4 from 19, complete sequence Length = 216521 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 208747 ttaagcaagcaagcaagcaa 208766
>gb|AC121768.2| Mus musculus BAC clone RP23-339H16 from 15, complete sequence Length = 199607 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 152852 ttaagcaagcaagcaagcaa 152833
>emb|CR293534.5| Zebrafish DNA sequence from clone CH211-13J1 in linkage group 6, complete sequence Length = 109426 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 gcttgcaagtgaccctttac 515 |||||||||||||||||||| Sbjct: 56189 gcttgcaagtgaccctttac 56170
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence Length = 219004 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 aaacatatatgtatcacacacaca 110 |||||||||||||||| ||||||| Sbjct: 162564 aaacatatatgtatcatacacaca 162587
>gb|AC117574.7| Mus musculus chromosome 5, clone RP23-32E20, complete sequence Length = 255008 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 acatatatgtatcacacaca 108 |||||||||||||||||||| Sbjct: 153361 acatatatgtatcacacaca 153380
>gb|AC105325.11| Mus musculus chromosome 1, clone RP24-455G23, complete sequence Length = 139801 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 62186 ttaagcaagcaagcaagcaa 62205
>emb|Z97989.1|HS66H14 Human DNA sequence from clone RP1-66H14 on chromosome 6q21-22 Contains the 3' end of the FYN gene for the FYN oncogene related to SRC, FGR, YES and the 5' end of the C6orf5 gene for chromosome 6 open reading frame 5 (NFkB-activating protein ACT1, connection to IKK and SAPK/JNK, chromosome 6 open reading frame 6) (C6orf5)(ACT1, CIKS, C6ORF6, DKFZP586G0522)(contains FLJ22949), complete sequence Length = 155937 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 154381 aagcaagcaagcaagcaatt 154400
>emb|AL590385.23| Human DNA sequence from clone RP11-5K23 on chromosome 1 Contains the FCGR2A gene for Fc fragment of IgG low affinity IIa receptor for (CD32), the HSPA6 gene for heat shock 70kDa protein 6 (HSP70B'), a ribosomal protein S23 (RPS23) pseudogene, the FCGR3A gene for Fc fragment of IgG low affinity IIIa receptor for (CD16), a novel gene and three CpG islands, complete sequence Length = 129505 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 113332 aagcaagcaagcaagcaatt 113351
>emb|AL359541.11| Human DNA sequence from clone RP11-474I16 on chromosome 1 Contains three novel genes, the FCGR2B gene for Fc fragment of IgG low affinity IIb receptor for (CD32), a ribosomal protein L31 (RPL31) pseudogene, the gene for Fc receptor homolog expressed in B cells (FREB), the gene for a novel protein (FLJ31052), the DUSP12 gene for dual specificity phosphatase 12, the 5' end of the ATF6 gene for activating transcription factor 6 and a CpG island, complete sequence Length = 158641 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 154104 aagcaagcaagcaagcaatt 154085
>emb|AL160153.11| Human DNA sequence from clone RP11-397O8 on chromosome 13 Contains the 3' end of the ITGBL1 gene for integrin, beta-like 1 (with EGF-like repeat domains), a novel gene, the 3' end of the FGF14 gene for fibroblast growth factor 14 and a high-mobility group box 1 (HMGB1) pseudogene, complete sequence Length = 147607 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 80416 atatatgtatcacacacaca 80435
>emb|AL109916.17|HSDJ139A3 Human DNA sequence from clone RP1-139A3 on chromosome 6q21-22.1 Contains part of the FYN gene for the FYN oncogene related to SRC, FGR, YES, complete sequence Length = 49183 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 444 aagcaagcaagcaagcaatt 463
>gb|AC157794.3| Mus musculus chromosome 1, clone RP24-111L14, complete sequence Length = 157029 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tatatgtatcacacacacaa 111 |||||||||||||||||||| Sbjct: 29441 tatatgtatcacacacacaa 29422
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ggcgggcgttgatttcttcc 368 |||||||||||||||||||| Sbjct: 2111213 ggcgggcgttgatttcttcc 2111232
>gb|AC102274.20| Mus musculus chromosome 3, clone RP24-286L19, complete sequence Length = 183113 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 29634 atatatgtatcacacacaca 29653
>gb|AC131386.2| Homo sapiens chromosome 5 clone CTD-3179P9, complete sequence Length = 169076 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 51217 atatatgtatcacacacaca 51198
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 28 ctggagatttaagcaagcaagcaagcaa 55 ||||||| | |||||||||||||||||| Sbjct: 135131 ctggagaatcaagcaagcaagcaagcaa 135158
>emb|AL451067.12| Human DNA sequence from clone RP11-25K21 on chromosome 1, complete sequence Length = 150019 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 102723 aagcaagcaagcaagcaatt 102742 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 21375 aagcaagcaagcaagcaatt 21394
>emb|AL672225.15| Mouse DNA sequence from clone RP23-384G1 on chromosome 11 Contains the 5' end of the Spnb2 gene for spectrin beta 2 and a CpG island, complete sequence Length = 172823 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 141903 ttaagcaagcaagcaagcaa 141922
>emb|AL662902.14| Mouse DNA sequence from clone RP23-417K16 on chromosome 11 Contains two novel genes, complete sequence Length = 154002 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 58926 ttaagcaagcaagcaagcaa 58945
>emb|AL669903.16| Mouse DNA sequence from clone RP23-72A14 on chromosome 11 Contains a CpG island, complete sequence Length = 208028 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 68466 atatatgtatcacacacaca 68485
>gb|AC164970.2| Mus musculus BAC clone RP24-222P1 from chromosome 16, complete sequence Length = 202577 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 18057 aagcaagcaagcaagcaatt 18076
>gb|AC161570.6| Mus musculus chromosome 5, clone RP23-36O9, complete sequence Length = 228402 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 23238 ttaagcaagcaagcaagcaa 23257
>gb|AC104850.2| Homo sapiens chromosome 3 clone RP11-241K18, complete sequence Length = 173580 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 115623 aagcaagcaagcaagcaatt 115604
>gb|AC161592.2| Mus musculus BAC clone RP24-252H17 from chromosome 13, complete sequence Length = 186026 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 143168 aagcaagcaagcaagcaatt 143149
>emb|BX679668.12| Mouse DNA sequence from clone RP23-83P7 on chromosome X, complete sequence Length = 121586 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 51213 aagcaagcaagcaagcaatt 51232
>gb|AC158900.4| Mus musculus chromosome 5, clone RP23-168G15, complete sequence Length = 211621 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 155610 ttaagcaagcaagcaagcaa 155591
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 taagcaagcaagcaagcaat 56 |||||||||||||||||||| Sbjct: 72032 taagcaagcaagcaagcaat 72051
>gb|AC114977.2| Homo sapiens chromosome 5 clone RP11-49C20, complete sequence Length = 180697 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 72310 atatatgtatcacacacaca 72291
>gb|AC026118.17| Homo sapiens 3 BAC RP11-67F24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176108 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 61863 aagcaagcaagcaagcaatt 61844
>gb|AC103834.2| Homo sapiens chromosome 8, clone RP11-1081K18, complete sequence Length = 173817 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 51244 aagcaagcaagcaagcaatt 51225
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 tcggcatctccttcaccgcaaaag 446 |||||||||| ||||||||||||| Sbjct: 1726932 tcggcatctctttcaccgcaaaag 1726955
>gb|AC099332.2| Homo sapiens chromosome 3 clone RP11-256B12, complete sequence Length = 164268 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 133263 aagcaagcaagcaagcaatt 133282
>gb|AC010370.5| Homo sapiens chromosome 3 clone CTD-2049J23, complete sequence Length = 157079 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 125147 aagcaagcaagcaagcaatt 125128
>ref|XM_692975.1| PREDICTED: Danio rerio similar to pumilio 2 (LOC569578), mRNA Length = 1750 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 568 tgaacaacataattagcgtactgatccttcat 599 |||||||||||||| || ||||| |||||||| Sbjct: 461 tgaacaacataatttgcatactggtccttcat 430
>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222553 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 acatatgtacaatcttcctt 272 |||||||||||||||||||| Sbjct: 201691 acatatgtacaatcttcctt 201710
>gb|AC018574.6| Homo sapiens chromosome , clone RP11-4G2, complete sequence Length = 171858 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 58453 aagcaagcaagcaagcaatt 58434
>gb|AC116380.14| Mus musculus chromosome 1, clone RP23-6F21, complete sequence Length = 232429 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 27680 ttaagcaagcaagcaagcaa 27699
>gb|AC160945.5| Mus musculus 10 BAC RP24-187J13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168109 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 3076 atatatgtatcacacacaca 3095
>gb|AC155827.10| Mus musculus 10 BAC RP24-408N5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149754 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 75471 ttaagcaagcaagcaagcaa 75490
>dbj|AK021040.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030003B10 product:unclassifiable, full insert sequence Length = 710 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 482 ttaagcaagcaagcaagcaa 463
>gb|AC022211.5|AC022211 Homo sapiens BAC clone RP11-649A18 from 17, complete sequence Length = 191155 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 24333 aagcaagcaagcaagcaatt 24314
>gb|AC153557.8| Mus musculus 10 BAC RP23-203H20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 233640 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 tccaagttttgttagcactt 300 |||||||||||||||||||| Sbjct: 95530 tccaagttttgttagcactt 95511
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 28 ctggagatttaagcaagcaagcaagcaa 55 ||||||| | |||||||||||||||||| Sbjct: 12310247 ctggagaatcaagcaagcaagcaagcaa 12310274
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 taagcaagcaagcaagcaat 56 |||||||||||||||||||| Sbjct: 16193143 taagcaagcaagcaagcaat 16193162
>gb|AC073436.62| Mus musculus strain C57BL/6J chromosome 2 clone rp23-50k8, complete sequence Length = 203901 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 28 ctggagatttaagcaagcaagcaagcaa 55 |||||| || |||||||||||||||||| Sbjct: 181362 ctggagtttaaagcaagcaagcaagcaa 181335
>gb|AY016370.1| Homo sapiens hnRNPA1 pseudogene, complete sequence; and CC chemokine receptor 8 (CCR8) and CX3C chemokine receptor 1 (CX3CR1) genes, complete cds Length = 86172 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 19887 aagcaagcaagcaagcaatt 19906
>gb|AC159746.5| Mus musculus 6 BAC RP23-437F11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 171039 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 acatatatgtatcacacaca 108 |||||||||||||||||||| Sbjct: 67799 acatatatgtatcacacaca 67780
>gb|AC157519.2| Mus musculus BAC clone RP23-202O17 from chromosome 19, complete sequence Length = 215073 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 153797 ttaagcaagcaagcaagcaa 153778
>gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome 7, complete sequence Length = 215193 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 43627 aagcaagcaagcaagcaatt 43646
>gb|AC131772.4| Mus musculus BAC clone RP24-300K9 from chromosome 5, complete sequence Length = 161015 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 53059 aagcaagcaagcaagcaatt 53078
>gb|AC093509.3| Homo sapiens chromosome 16 clone CTD-2337L2, complete sequence Length = 120592 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 33000 aagcaagcaagcaagcaatt 32981
>gb|AF257711.1|AF257711 Mus musculus proton-dependent high affinity oligopeptide transporter (Pept2) gene, complete cds Length = 44259 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 4048 aagcaagcaagcaagcaatt 4067
>gb|AC103893.2| Papio anubis clone RP41-216H1, complete sequence Length = 155255 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 acatatatgtatcacacaca 108 |||||||||||||||||||| Sbjct: 146936 acatatatgtatcacacaca 146917
>gb|AC093424.3| Homo sapiens chromosome 1 clone RP11-467C18, complete sequence Length = 153854 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 36170 atatatgtatcacacacaca 36189
>gb|AC154232.1| Mus musculus BAC clone RP24-340J3 from chromosome 16, complete sequence Length = 141529 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 49562 aagcaagcaagcaagcaatt 49543
>gb|AC114313.2| Homo sapiens chromosome 5 clone RP11-30D9, complete sequence Length = 109840 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 30992 atatatgtatcacacacaca 30973
>gb|AC153994.8| Mus musculus 6 BAC RP24-178H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179333 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 72027 aagcaagcaagcaagcaatt 72046
>emb|AL928950.8| Mouse DNA sequence from clone RP23-70E1 on chromosome 2, complete sequence Length = 157063 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 10591 aagcaagcaagcaagcaatt 10610
>dbj|BS000124.1| Pan troglodytes chromosome 22 clone:PTB-069P04, map 22, complete sequences Length = 84339 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 65693 atatatgtatcacacacaca 65674
>dbj|BS000050.1| Pan troglodytes chromosome 22 clone:RP43-038C12, map 22, complete sequences Length = 202014 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 agcaagcaagcaagcaatta 58 |||||||||||||||||||| Sbjct: 85698 agcaagcaagcaagcaatta 85717
>gb|AC002528.1|AC002528 Human BAC clone GS1-542D18 from 7q31-q32, complete sequence Length = 141120 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 agatttaagcaagcaagcaagcaa 55 ||||||||| |||||||||||||| Sbjct: 41074 agatttaagtaagcaagcaagcaa 41051
>gb|AF506935.1| Bos taurus clone BMS5033 microsatellite sequence Length = 227 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 155 atatatgtatcacacacaca 174
>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence Length = 204416 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 181368 ttaagcaagcaagcaagcaa 181387
>emb|BX927074.16| Zebrafish DNA sequence from clone DKEY-7L12 in linkage group 18, complete sequence Length = 152517 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 taagcaagcaagcaagcaattaca 60 ||||||||||||||||||| |||| Sbjct: 142823 taagcaagcaagcaagcaactaca 142800
>gb|AC144461.33| Mus musculus strain C57BL/6J clone rp23-427m23, complete sequence Length = 164848 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 81212 ttaagcaagcaagcaagcaa 81193
>gb|AC123994.11| Mus musculus chromosome 5, clone RP24-360P14, complete sequence Length = 148929 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 87215 ttaagcaagcaagcaagcaa 87196
>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 279677 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 74075 atatatgtatcacacacaca 74056
>emb|CT025735.16| Mouse DNA sequence from clone RP24-338F19 on chromosome 12, complete sequence Length = 165439 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 89321 ttaagcaagcaagcaagcaa 89302
>dbj|AP001729.1| Homo sapiens genomic DNA, chromosome 21q, section 73/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 284184 atatatgtatcacacacaca 284165
>gb|AY102585.1| Fusarium pseudograminearum strain NRRL 28338 trichothecene gene cluster, partial sequence Length = 18891 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 10665 aagcaagcaagcaagcaatt 10646
>gb|AY102583.1| Fusarium pseudograminearum strain NRRL 28334 trichothecene gene cluster, partial sequence Length = 18875 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 10653 aagcaagcaagcaagcaatt 10634
>gb|AY102582.1| Fusarium pseudograminearum strain NRRL 28065 trichothecene gene cluster, partial sequence Length = 18894 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 10669 aagcaagcaagcaagcaatt 10650
>gb|AY102580.1| Fusarium pseudograminearum strain 28062 trichothecene gene cluster, partial sequence Length = 18872 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 10647 aagcaagcaagcaagcaatt 10628
>gb|AC162300.3| Mus musculus chromosome 3, clone RP23-224F23, complete sequence Length = 162774 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 73104 atatatgtatcacacacaca 73085
>emb|BX004889.8| Zebrafish DNA sequence from clone DKEY-65P15 in linkage group 25, complete sequence Length = 253422 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 agatttaagcaagcaagcaagcaa 55 |||| ||||||||||||||||||| Sbjct: 228801 agatataagcaagcaagcaagcaa 228778
>gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosome 7, complete sequence Length = 228892 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 226150 ttaagcaagcaagcaagcaa 226131
>gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosome 17, complete sequence Length = 209191 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 aaacatatatgtatcacacacaca 110 ||||||||||| |||||||||||| Sbjct: 156217 aaacatatatgcatcacacacaca 156194
>gb|AF030695.1|AF030695 Filobasidiella neoformans putative Cel1p (CEL1) gene, complete cds Length = 2500 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 caagtgaccctttacacggc 520 |||||||||||||||||||| Sbjct: 54 caagtgaccctttacacggc 35
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 taagcaagcaagcaagcaat 56 |||||||||||||||||||| Sbjct: 16201384 taagcaagcaagcaagcaat 16201403
>gb|AC154700.2| Mus musculus BAC clone RP24-344E15 from chromosome 16, complete sequence Length = 199878 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 155265 aagcaagcaagcaagcaatt 155284
>gb|AC135360.3| Mus musculus BAC clone RP24-396P4 from 10, complete sequence Length = 154276 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 148443 ttaagcaagcaagcaagcaa 148424
>gb|AC140264.2| Mus musculus BAC clone RP23-316F10 from 10, complete sequence Length = 176292 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 160074 ttaagcaagcaagcaagcaa 160093
>gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complete sequence Length = 186518 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 acatatatgtatcacacacacaag 112 |||||||| ||||||||||||||| Sbjct: 66902 acatatatatatcacacacacaag 66879
>emb|CT025575.12| Mouse DNA sequence from clone RP23-272A7 on chromosome 9, complete sequence Length = 232192 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 29971 aagcaagcaagcaagcaatt 29990
>gb|AC173340.1| Mus musculus BAC clone RP24-257F22 from chromosome 9, complete sequence Length = 195116 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 29246 aagcaagcaagcaagcaatt 29227
>dbj|AB066010.1| Chordaria flagelliformis DNA, 26S rRNA, IGS, 5S rRNA, partial and complete sequence, strain:Isle. of Man_E Length = 720 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 691 aagcaagcaagcaagcaatt 672
>emb|AL805904.12| Mouse DNA sequence from clone RP23-47B18 on chromosome 4, complete sequence Length = 132319 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 90329 ttaagcaagcaagcaagcaa 90310
>emb|AL732615.15| Mouse DNA sequence from clone RP23-190O8 on chromosome 4, complete sequence Length = 189819 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 tttaagcaagcaagcaagca 54 |||||||||||||||||||| Sbjct: 76966 tttaagcaagcaagcaagca 76947
>emb|AL928574.7| Mouse DNA sequence from clone RP23-332L19 on chromosome 4, complete sequence Length = 114436 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 61744 ttaagcaagcaagcaagcaa 61763
>gb|AC158169.2| Mus musculus BAC clone RP23-210A16 from chromosome 5, complete sequence Length = 223006 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 212292 aagcaagcaagcaagcaatt 212311
>gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosome 17, complete sequence Length = 177378 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 aaacatatatgtatcacacacaca 110 ||||||||||| |||||||||||| Sbjct: 468 aaacatatatgcatcacacacaca 445
>emb|AL671229.11| Mouse DNA sequence from clone RP23-93N10 on chromosome 4, complete sequence Length = 237082 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 74946 aagcaagcaagcaagcaatt 74927
>emb|AL844547.9| Mouse DNA sequence from clone RP23-216B20 on chromosome 2, complete sequence Length = 210589 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 19066 ttaagcaagcaagcaagcaa 19047
>emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromosome 2, complete sequence Length = 212009 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 28 ctggagatttaagcaagcaagcaagcaa 55 |||||| || |||||||||||||||||| Sbjct: 61391 ctggagtttaaagcaagcaagcaagcaa 61364
>gb|AC166834.2| Mus musculus BAC clone RP23-158D24 from chromosome 7, complete sequence Length = 212016 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 85086 ttaagcaagcaagcaagcaa 85105
>emb|AJ421481.1| Bos taurus X-inactivation center region, Jpx and Xist genes Length = 233345 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 62360 ttaagcaagcaagcaagcaa 62341
>gb|AC108908.16| Mus musculus chromosome 7, clone RP23-179K7, complete sequence Length = 220289 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 taagcaagcaagcaagcaat 56 |||||||||||||||||||| Sbjct: 135004 taagcaagcaagcaagcaat 135023
>emb|AL732608.8| Mouse DNA sequence from clone RP23-243C9 on chromosome 4, complete sequence Length = 126615 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttaagcaagcaagcaagcaa 55 |||||||||||||||||||| Sbjct: 103138 ttaagcaagcaagcaagcaa 103119
>gb|AC087276.13| Homo sapiens chromosome 11, clone RP11-484D2, complete sequence Length = 204109 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 aaacatatatgtatcacaca 106 |||||||||||||||||||| Sbjct: 173401 aaacatatatgtatcacaca 173382
>dbj|AP000156.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 8/16, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 92601 atatatgtatcacacacaca 92582
>dbj|AP000014.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 7/13 Length = 302521 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 129518 atatatgtatcacacacaca 129499
>dbj|AP001430.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:T1435, LB7T-ERG region, complete sequence Length = 40307 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atatatgtatcacacacaca 110 |||||||||||||||||||| Sbjct: 27366 atatatgtatcacacacaca 27347
>dbj|AP005139.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-93H10, complete sequences Length = 165500 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aagcaagcaagcaagcaatt 57 |||||||||||||||||||| Sbjct: 117723 aagcaagcaagcaagcaatt 117742 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,449,304 Number of Sequences: 3902068 Number of extensions: 5449304 Number of successful extensions: 133942 Number of sequences better than 10.0: 228 Number of HSP's better than 10.0 without gapping: 228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 132748 Number of HSP's gapped (non-prelim): 1000 length of query: 599 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 576 effective length of database: 17,143,297,704 effective search space: 9874539477504 effective search space used: 9874539477504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
