ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19n12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AMP1_PLAFQ (O96935) M1-family aminopeptidase (EC 3.4.11.-) (Pfa-M1) 32 1.5

>AMP1_PLAFQ (O96935) M1-family aminopeptidase (EC 3.4.11.-) (Pfa-M1)|
          Length = 1085

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 527 KISLQGPHFIATLKDYVFALYQERFLCSFRSPVDVIMWAD 408
           K  L+ PH  A  K Y+ +L Q+R++ +F S +D  + AD
Sbjct: 808 KYLLEDPHADAGFKSYIVSLPQDRYIINFVSNLDTDVLAD 847


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,160,881
Number of Sequences: 219361
Number of extensions: 1371607
Number of successful extensions: 2594
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2594
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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