>ref|XM_464473.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1029

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                  
Query: 241 gggcacgagaacagcagcgacgcgttggttccaccaaacccgaaagaattcgaga 295
           |||||||||||||||||||||| |||||||||||||||||| || ||||||||||
Sbjct: 713 gggcacgagaacagcagcgacgtgttggttccaccaaacccaaaggaattcgaga 659

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                      
Query: 241     gggcacgagaacagcagcgacgcgttggttccaccaaacccgaaagaattcgaga 295
               |||||||||||||||||||||| |||||||||||||||||| || ||||||||||
Sbjct: 5422484 gggcacgagaacagcagcgacgtgttggttccaccaaacccaaaggaattcgaga 5422538

>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1524_D08
          Length = 143046

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                    
Query: 241   gggcacgagaacagcagcgacgcgttggttccaccaaacccgaaagaattcgaga 295
             |||||||||||||||||||||| |||||||||||||||||| || ||||||||||
Sbjct: 76065 gggcacgagaacagcagcgacgtgttggttccaccaaacccaaaggaattcgaga 76119

>dbj|AK063866.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-E04, full
           insert sequence
          Length = 1029

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                  
Query: 241 gggcacgagaacagcagcgacgcgttggttccaccaaacccgaaagaattcgaga 295
           |||||||||||||||||||||| |||||||||||||||||| || ||||||||||
Sbjct: 713 gggcacgagaacagcagcgacgtgttggttccaccaaacccaaaggaattcgaga 659

>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome
          Length = 859006

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 265    ttggttccaccaaacccgaaagaattcgaga 295
              |||||||| |||||||| |||||||||||||
Sbjct: 370408 ttggttcccccaaacccaaaagaattcgaga 370378

>gb|AY552545.2| Uncultured marine gamma proteobacterium EBAC20E09 clone EBAC20E09,
              complete sequence
          Length = 144407

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 262    gcgttggttccaccaaacccgaaagaatt 290
              ||||| |||||||||||||| ||||||||
Sbjct: 109456 gcgtttgttccaccaaacccaaaagaatt 109484

>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0092N12, complete sequence
          Length = 109198

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 209   ggagagggagcgtgatgttggatc 232
             ||||||||||||||||| ||||||
Sbjct: 19244 ggagagggagcgtgatgctggatc 19267

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 258     cgacgcgttggttccaccaaacccgaaagaattcga 293
               |||||||||||| || || |||||||| ||||||||
Sbjct: 1839298 cgacgcgttggtgccgccgaacccgaacgaattcga 1839333

>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 209    ggagagggagcgtgatgttggatc 232
              ||||||||||||||||| ||||||
Sbjct: 983310 ggagagggagcgtgatgctggatc 983287

>emb|BX927156.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 9/10
          Length = 349115

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 261    cgcgttggttccaccaaacccgaa 284
              ||||||||||||||| ||||||||
Sbjct: 245923 cgcgttggttccaccgaacccgaa 245946

>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                          
Query: 250    aacagcagcgacgcgttggttccaccaaacccgaaagaattcga 293
              |||| |||||||||||| || ||||| |||||||| || |||||
Sbjct: 337359 aacaccagcgacgcgttcgtgccaccgaacccgaacgagttcga 337402

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
              complete sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 209    ggagagggagcgtgatgttggatc 232
              ||||||||||||||||| ||||||
Sbjct: 983310 ggagagggagcgtgatgctggatc 983287

>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 261     cgcgttggttccaccaaacccgaa 284
               ||||||||||||||| ||||||||
Sbjct: 3066204 cgcgttggttccaccgaacccgaa 3066227

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 258     cgacgcgttggttccaccaaacccgaaagaattcga 293
               |||||| ||||| || ||||| ||||||||||||||
Sbjct: 4518892 cgacgcattggtaccgccaaaaccgaaagaattcga 4518857

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 270     tccaccaaacccgaaagaattcga 293
               |||||||||||| |||||||||||
Sbjct: 2120576 tccaccaaacccaaaagaattcga 2120599

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 209    ggagagggagcgtgatgttggatc 232
              ||||||||||||||||| ||||||
Sbjct: 983307 ggagagggagcgtgatgctggatc 983284


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,977,970
Number of Sequences: 3902068
Number of extensions: 1977970
Number of successful extensions: 32653
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32532
Number of HSP's gapped (non-prelim): 121
length of query: 306
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 284
effective length of database: 17,147,199,772
effective search space: 4869804735248
effective search space used: 4869804735248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)