Clone Name	rbags19n04
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY110246.1| Zea mays CL9441_1 mRNA sequence	327	2e-86
2	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
3	dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
4	gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome...	127	5e-26
5	gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome...	127	5e-26
6	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	127	5e-26
7	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	127	5e-26
8	gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, co...	46	0.13
9	gb|AC040918.7| Homo sapiens chromosome 15, clone RP11-684B21, co...	46	0.13
10	gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility lo...	44	0.52
11	gb|AC123947.5| Mus musculus BAC clone RP23-103O6 from chromosome...	44	0.52
12	emb|CT009767.6| Mouse DNA sequence from clone RP23-24A13 on chro...	44	0.52
13	gb|AC122237.4| Mus musculus BAC clone RP23-143A15 from 8, comple...	44	0.52
14	gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana...	44	0.52
15	gb|AF153677.1|AF153677 Arabidopsis thaliana vacuolar H+-pumping ...	44	0.52
16	gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7,...	44	0.52
17	gb|AC131111.4| Mus musculus BAC clone RP23-449N4 from chromosome...	42	2.1
18	emb|Z70751.1|CEF11A3 Caenorhabditis elegans Cosmid F11A3, comple...	42	2.1
19	gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complet...	42	2.1
20	ref|NM_001028614.2| Caenorhabditis elegans F11A3.2b (F11A3.2) mR...	42	2.1
21	ref|NM_001028613.1| Caenorhabditis elegans F11A3.2a (F11A3.2) mR...	42	2.1
22	gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome	42	2.1
23	gb|AC147232.4| Mus musculus BAC clone RP23-311C15 from 7, comple...	42	2.1
24	ref|NM_114019.1| Arabidopsis thaliana unknown protein AT3G31960 ...	40	8.2
25	gb|AC084385.5| Mus musculus chromosome 15 clone RP23-54K18, comp...	40	8.2
26	gb|AC121517.7| Mus musculus chromosome 15, clone RP23-120A12, co...	40	8.2
27	gb|AC124358.4| Mus musculus BAC clone RP24-491B24 from chromosom...	40	8.2
28	gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cance...	40	8.2
29	emb|AL353631.17| Human DNA sequence from clone RP11-5N16 on chro...	40	8.2
30	emb|AL009179.1|HS97D16 Human DNA sequence from clone RP1-97D16 o...	40	8.2
31	emb|AL929553.6| Mouse DNA sequence from clone RP24-316B1 on chro...	40	8.2
32	gb|AC157551.6| Mus musculus chromosome 5, clone RP24-270K7, comp...	40	8.2
33	gb|AC027308.5| Homo sapiens chromosome 5 clone CTB-56J15, comple...	40	8.2
34	gb|AC020549.4|AC020549 Homo sapiens BAC clone RP11-172C16 from 1...	40	8.2
35	gb|AC007217.5| Homo sapiens chromosome 16 clone RP11-167B4, comp...	40	8.2
36	gb|AC007750.3| Homo sapiens BAC clone RP11-576I16 from 2, comple...	40	8.2
37	dbj|AB180731.1| Meriones unguiculatus immt mRNA for Immt-Es, com...	40	8.2
38	dbj|AB180730.1| Meriones unguiculatus immt mRNA for Immt-Er, com...	40	8.2
39	emb|BX119959.7| Mouse DNA sequence from clone RP23-346N16 on chr...	40	8.2
40	dbj|AP002043.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	40	8.2
41	dbj|AP001301.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	40	8.2
42	gb|AF177401.1|AF177401 Spermophilus tridecemlineatus hormone-sen...	40	8.2
43	emb|BX928749.12| Zebrafish DNA sequence from clone CH211-201A8 i...	40	8.2
44	gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome...	40	8.2
45	gb|AC126692.4| Mus musculus BAC clone RP23-246J18 from 6, comple...	40	8.2
46	gb|AC156573.3| Mus musculus BAC clone RP23-133P6 from chromosome...	40	8.2
47	emb|AL627211.13| Mouse DNA sequence from clone RP23-104G20 on ch...	40	8.2

---

>gb|AY110246.1| Zea mays CL9441_1 mRNA sequence
          Length = 690

 Score =  327 bits (165), Expect = 2e-86
 Identities = 275/312 (88%)
 Strand = Plus / Plus

                                                                       
Query: 273 tcggagctgagggtgacacacgggaaccagtatctacgcttgccatccctgtgtccgtcg 332
           ||||||||||  ||||| || |||||||| ||||| ||||||||||||||||| || |||
Sbjct: 178 tcggagctgacagtgacgcatgggaaccaatatcttcgcttgccatccctgtggccatcg 237

                                                                       
Query: 333 tcgatcatagcaagtccctcctttagcaaggtttcaagggcatcaattgcacggccagtt 392
           |||||||||||||| |||||||| ||||| |||||||| |||||||| ||||| ||||| 
Sbjct: 238 tcgatcatagcaagcccctccttcagcaaagtttcaagagcatcaatcgcacgcccagta 297

                                                                       
Query: 393 gaccatgagaactccttctcaacttgttctacggtgacatagcctttagcctgagctagt 452
           ||||||||||| ||||| ||||||||||| || ||||||||||| | |||||||||||| 
Sbjct: 298 gaccatgagaattccttttcaacttgttccaccgtgacatagccatcagcctgagctagc 357

                                                                       
Query: 453 tcaagtatcccattatggtctttatttaactcagtaggaaccgatcgcacaagctttttc 512
            ||||||||||| | |||||||||||||| || |||||||| || |||||||||||| ||
Sbjct: 358 ccaagtatcccactgtggtctttatttaattcggtaggaactgaacgcacaagctttctc 417

                                                                       
Query: 513 ttnccaacagaaaatacttcaaaaccactaccaaggaccttgagcttacttatagcacgt 572
            | |||||||||| |||||||||||||||||||||||| || ||||| ||||||||||| 
Sbjct: 418 ctcccaacagaaattacttcaaaaccactaccaaggacttttagcttgcttatagcacgc 477

                       
Query: 573 aaacagtcatct 584
           ||||||||||||
Sbjct: 478 aaacagtcatct 489

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  135 bits (68), Expect = 2e-28
 Identities = 100/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 442      cctgagctagttcaagtatcccattatggtctttatttaactcagtaggaaccgatcgca 501
                |||||||||| |||||||||||||| || |||||||| |  || |||||||| || ||||
Sbjct: 20444462 cctgagctagctcaagtatcccattgtgatctttattcagttctgtaggaacagaacgca 20444521

                                                                   
Query: 502      caagctttttcttnccaacagaaaatacttcaaaaccactaccaaggacct 552
                ||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 20444522 caagctttttcttcccaacagaaattacttcaaaaccactaccaaggacct 20444572



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                            
Query: 276      gagctgagggtgacacacgggaaccagtatctacgcttgccatccctgtgtccgtcgtcg 335
                |||||||| ||||| ||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 20443717 gagctgagagtgacgcacgggaaccagtatctgcgcttgccatccctgtgcccatcgtcg 20443776

                           
Query: 336      atcatagcaag 346
                ||||| |||||
Sbjct: 20443777 atcatcgcaag 20443787



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                            
Query: 352      cctttagcaaggtttcaagggcatcaattgcacggccagttgaccatgagaactccttct 411
                |||| ||||| ||||||||| | ||||| ||||||||||||||||| |||||||   |||
Sbjct: 20444082 ccttgagcaaagtttcaaggacgtcaatggcacggccagttgaccacgagaactttctct 20444141

                                                  
Query: 412      caacttgttctacggtgacatagcctttagcctg 445
                | ||||| |||||||||||| | |||| ||||||
Sbjct: 20444142 cgacttgctctacggtgacaaaaccttcagcctg 20444175



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 550      ccttgagcttacttatagcacgtaaacagtcatctga 586
                |||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 20444734 ccttcagcttacttatcgcacgcaaacaatcatctga 20444770

---

>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1531_B07
          Length = 115245

 Score =  135 bits (68), Expect = 2e-28
 Identities = 100/111 (90%)
 Strand = Plus / Plus

                                                                         
Query: 442   cctgagctagttcaagtatcccattatggtctttatttaactcagtaggaaccgatcgca 501
             |||||||||| |||||||||||||| || |||||||| |  || |||||||| || ||||
Sbjct: 72601 cctgagctagctcaagtatcccattgtgatctttattcagttctgtaggaacagaacgca 72660

                                                                
Query: 502   caagctttttcttnccaacagaaaatacttcaaaaccactaccaaggacct 552
             ||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 72661 caagctttttcttcccaacagaaattacttcaaaaccactaccaaggacct 72711



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                         
Query: 276   gagctgagggtgacacacgggaaccagtatctacgcttgccatccctgtgtccgtcgtcg 335
             |||||||| ||||| ||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 71856 gagctgagagtgacgcacgggaaccagtatctgcgcttgccatccctgtgcccatcgtcg 71915

                        
Query: 336   atcatagcaag 346
             ||||| |||||
Sbjct: 71916 atcatcgcaag 71926



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                         
Query: 352   cctttagcaaggtttcaagggcatcaattgcacggccagttgaccatgagaactccttct 411
             |||| ||||| ||||||||| | ||||| ||||||||||||||||| |||||||   |||
Sbjct: 72221 ccttgagcaaagtttcaaggacgtcaatggcacggccagttgaccacgagaactttctct 72280

                                               
Query: 412   caacttgttctacggtgacatagcctttagcctg 445
             | ||||| |||||||||||| | |||| ||||||
Sbjct: 72281 cgacttgctctacggtgacaaaaccttcagcctg 72314



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 550   ccttgagcttacttatagcacgtaaacagtcatctga 586
             |||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 72873 ccttcagcttacttatcgcacgcaaacaatcatctga 72909

---

>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0002C14, complete sequence
          Length = 154029

 Score =  127 bits (64), Expect = 5e-26
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                          
Query: 442    cctgagctagttcaagtatcccattatggtctttatttaactcagtaggaaccgatcgca 501
              |||||||||| |||||||||||||| || |||||||| |  || |||||||| || || |
Sbjct: 146593 cctgagctagctcaagtatcccattgtgatctttattcagttctgtaggaacagaacgta 146534

                                                                 
Query: 502    caagctttttcttnccaacagaaaatacttcaaaaccactaccaaggacct 552
              ||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 146533 caagctttttcttcccaacagaaattacttcaaaaccactaccaaggacct 146483



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Minus

                                                                      
Query: 291    cacgggaaccagtatctacgcttgccatccctgtgtccgtcgtcgatcatagcaag 346
              ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 147320 cacgggaaccagtatctgcgcttgccatccctgtgcccatcgtcgatcatagcaag 147265



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                          
Query: 352    cctttagcaaggtttcaagggcatcaattgcacggccagttgaccatgagaactccttct 411
              |||| ||||| ||||||||| |||| || ||||||||||||||||| |||||||   |||
Sbjct: 146988 ccttgagcaaagtttcaaggacatcgatggcacggccagttgaccacgagaactttctct 146929

                                                
Query: 412    caacttgttctacggtgacatagcctttagcctg 445
                ||||||||||| |||||| | |||| ||||||
Sbjct: 146928 tgacttgttctactgtgacaaaaccttcagcctg 146895



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 550    ccttgagcttacttatagcacgtaaacagtcatctga 586
              |||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 146339 ccttcagcttacttattgcacgcaaacaatcatctga 146303

---

>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0076M06, complete sequence
          Length = 133581

 Score =  127 bits (64), Expect = 5e-26
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                         
Query: 442   cctgagctagttcaagtatcccattatggtctttatttaactcagtaggaaccgatcgca 501
             |||||||||| |||||||||||||| || |||||||| |  || |||||||| || || |
Sbjct: 44353 cctgagctagctcaagtatcccattgtgatctttattcagttctgtaggaacagaacgta 44294

                                                                
Query: 502   caagctttttcttnccaacagaaaatacttcaaaaccactaccaaggacct 552
             ||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 44293 caagctttttcttcccaacagaaattacttcaaaaccactaccaaggacct 44243



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Minus

                                                                     
Query: 291   cacgggaaccagtatctacgcttgccatccctgtgtccgtcgtcgatcatagcaag 346
             ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 45080 cacgggaaccagtatctgcgcttgccatccctgtgcccatcgtcgatcatagcaag 45025



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                         
Query: 352   cctttagcaaggtttcaagggcatcaattgcacggccagttgaccatgagaactccttct 411
             |||| ||||| ||||||||| |||| || ||||||||||||||||| |||||||   |||
Sbjct: 44748 ccttgagcaaagtttcaaggacatcgatggcacggccagttgaccacgagaactttctct 44689

                                               
Query: 412   caacttgttctacggtgacatagcctttagcctg 445
               ||||||||||| |||||| | |||| ||||||
Sbjct: 44688 tgacttgttctactgtgacaaaaccttcagcctg 44655



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 550   ccttgagcttacttatagcacgtaaacagtcatctga 586
             |||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 44099 ccttcagcttacttattgcacgcaaacaatcatctga 44063

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  127 bits (64), Expect = 5e-26
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                            
Query: 442      cctgagctagttcaagtatcccattatggtctttatttaactcagtaggaaccgatcgca 501
                |||||||||| |||||||||||||| || |||||||| |  || |||||||| || || |
Sbjct: 26242704 cctgagctagctcaagtatcccattgtgatctttattcagttctgtaggaacagaacgta 26242645

                                                                   
Query: 502      caagctttttcttnccaacagaaaatacttcaaaaccactaccaaggacct 552
                ||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 26242644 caagctttttcttcccaacagaaattacttcaaaaccactaccaaggacct 26242594



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Minus

                                                                        
Query: 291      cacgggaaccagtatctacgcttgccatccctgtgtccgtcgtcgatcatagcaag 346
                ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 26243431 cacgggaaccagtatctgcgcttgccatccctgtgcccatcgtcgatcatagcaag 26243376



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                            
Query: 352      cctttagcaaggtttcaagggcatcaattgcacggccagttgaccatgagaactccttct 411
                |||| ||||| ||||||||| |||| || ||||||||||||||||| |||||||   |||
Sbjct: 26243099 ccttgagcaaagtttcaaggacatcgatggcacggccagttgaccacgagaactttctct 26243040

                                                  
Query: 412      caacttgttctacggtgacatagcctttagcctg 445
                  ||||||||||| |||||| | |||| ||||||
Sbjct: 26243039 tgacttgttctactgtgacaaaaccttcagcctg 26243006



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 550      ccttgagcttacttatagcacgtaaacagtcatctga 586
                |||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 26242450 ccttcagcttacttattgcacgcaaacaatcatctga 26242414

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  127 bits (64), Expect = 5e-26
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                            
Query: 442      cctgagctagttcaagtatcccattatggtctttatttaactcagtaggaaccgatcgca 501
                |||||||||| |||||||||||||| || |||||||| |  || |||||||| || || |
Sbjct: 26556962 cctgagctagctcaagtatcccattgtgatctttattcagttctgtaggaacagaacgta 26556903

                                                                   
Query: 502      caagctttttcttnccaacagaaaatacttcaaaaccactaccaaggacct 552
                ||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 26556902 caagctttttcttcccaacagaaattacttcaaaaccactaccaaggacct 26556852



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Minus

                                                                        
Query: 291      cacgggaaccagtatctacgcttgccatccctgtgtccgtcgtcgatcatagcaag 346
                ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 26557689 cacgggaaccagtatctgcgcttgccatccctgtgcccatcgtcgatcatagcaag 26557634



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                            
Query: 352      cctttagcaaggtttcaagggcatcaattgcacggccagttgaccatgagaactccttct 411
                |||| ||||| ||||||||| |||| || ||||||||||||||||| |||||||   |||
Sbjct: 26557357 ccttgagcaaagtttcaaggacatcgatggcacggccagttgaccacgagaactttctct 26557298

                                                  
Query: 412      caacttgttctacggtgacatagcctttagcctg 445
                  ||||||||||| |||||| | |||| ||||||
Sbjct: 26557297 tgacttgttctactgtgacaaaaccttcagcctg 26557264



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 550      ccttgagcttacttatagcacgtaaacagtcatctga 586
                |||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 26556708 ccttcagcttacttattgcacgcaaacaatcatctga 26556672

---

>gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, complete sequence
          Length = 175123

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 203    catgaagacaaggggaaaagaaa 225
              |||||||||||||||||||||||
Sbjct: 150045 catgaagacaaggggaaaagaaa 150067

---

>gb|AC040918.7| Homo sapiens chromosome 15, clone RP11-684B21, complete sequence
          Length = 175919

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 203   catgaagacaaggggaaaagaaa 225
             |||||||||||||||||||||||
Sbjct: 12562 catgaagacaaggggaaaagaaa 12584

---

>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III
             region:butyrophilin-like protein gene, partial cds;
             Notch4, PBX2, RAGE, lysophatidic acid acyl
             transferase-alpha, palmitoyl-protein thioesterase 2
             (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds;
             and CYP21OHB pseudogene, complete sequence
          Length = 201964

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   tccctacttcttacacaggaag 149
             ||||||||||||||||||||||
Sbjct: 48675 tccctacttcttacacaggaag 48696

---

>gb|AC123947.5| Mus musculus BAC clone RP23-103O6 from chromosome 8, complete sequence
          Length = 187773

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 30     ataaccagcatccacaacttta 51
              ||||||||||||||||||||||
Sbjct: 176395 ataaccagcatccacaacttta 176416

---

>emb|CT009767.6| Mouse DNA sequence from clone RP23-24A13 on chromosome 17, complete
              sequence
          Length = 221442

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    tccctacttcttacacaggaag 149
              ||||||||||||||||||||||
Sbjct: 129710 tccctacttcttacacaggaag 129731

---

>gb|AC122237.4| Mus musculus BAC clone RP23-143A15 from 8, complete sequence
          Length = 183867

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 30    ataaccagcatccacaacttta 51
             ||||||||||||||||||||||
Sbjct: 28180 ataaccagcatccacaacttta 28201

---

>gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana BAC F10A5, complete sequence
          Length = 129547

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 12    tttactgaaaaagtgaaaataa 33
             ||||||||||||||||||||||
Sbjct: 56946 tttactgaaaaagtgaaaataa 56967

---

>gb|AF153677.1|AF153677 Arabidopsis thaliana vacuolar H+-pumping ATPase 16 kDa subunit c
            isoform 4 (AVAP4) gene, complete cds
          Length = 2762

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 12   tttactgaaaaagtgaaaataa 33
            ||||||||||||||||||||||
Sbjct: 2175 tttactgaaaaagtgaaaataa 2154

---

>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence
          Length = 201986

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   tccctacttcttacacaggaag 149
             ||||||||||||||||||||||
Sbjct: 48672 tccctacttcttacacaggaag 48693

---

>gb|AC131111.4| Mus musculus BAC clone RP23-449N4 from chromosome 7, complete sequence
          Length = 179068

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 212    aaggggaaaagaaaatacaac 232
              |||||||||||||||||||||
Sbjct: 162113 aaggggaaaagaaaatacaac 162133

---

>emb|Z70751.1|CEF11A3 Caenorhabditis elegans Cosmid F11A3, complete sequence
          Length = 8362

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 19   aaaaagtgaaaataaccagca 39
            |||||||||||||||||||||
Sbjct: 7670 aaaaagtgaaaataaccagca 7690

---

>gb|AC019084.9| Homo sapiens BAC clone RP11-354O2 from 7, complete sequence
          Length = 201215

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 54    tgaaaaacacaacagaattct 74
             |||||||||||||||||||||
Sbjct: 44225 tgaaaaacacaacagaattct 44245

---

>ref|NM_001028614.2| Caenorhabditis elegans F11A3.2b (F11A3.2) mRNA, complete cds
          Length = 1536

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 aaaaagtgaaaataaccagca 39
          |||||||||||||||||||||
Sbjct: 57 aaaaagtgaaaataaccagca 77

---

>ref|NM_001028613.1| Caenorhabditis elegans F11A3.2a (F11A3.2) mRNA, complete cds
          Length = 2056

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 19  aaaaagtgaaaataaccagca 39
           |||||||||||||||||||||
Sbjct: 174 aaaaagtgaaaataaccagca 194

---

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 523     aaaatacttcaaaaccactac 543
               |||||||||||||||||||||
Sbjct: 3803924 aaaatacttcaaaaccactac 3803944

---

>gb|AC147232.4| Mus musculus BAC clone RP23-311C15 from 7, complete sequence
          Length = 191521

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 212   aaggggaaaagaaaatacaac 232
             |||||||||||||||||||||
Sbjct: 30140 aaggggaaaagaaaatacaac 30160

---

>ref|NM_114019.1| Arabidopsis thaliana unknown protein AT3G31960 mRNA, complete cds
          Length = 354

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 46/55 (83%)
 Strand = Plus / Minus

                                                                  
Query: 465 ttatggtctttatttaactcagtaggaaccgatcgcacaagctttttcttnccaa 519
           ||||||||||| || | |||||| || ||||| || |||| ||||||||| ||||
Sbjct: 323 ttatggtctttgttcagctcagtgggtaccgaacgaacaaactttttcttgccaa 269

---

>gb|AC084385.5| Mus musculus chromosome 15 clone RP23-54K18, complete sequence
          Length = 203712

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 83     aatggcacacaatttacatttgca 106
              |||||||||||||| |||||||||
Sbjct: 125275 aatggcacacaattgacatttgca 125252

---

>gb|AC121517.7| Mus musculus chromosome 15, clone RP23-120A12, complete sequence
          Length = 222681

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 83     aatggcacacaatttacatttgca 106
              |||||||||||||| |||||||||
Sbjct: 179674 aatggcacacaattgacatttgca 179697

---

>gb|AC124358.4| Mus musculus BAC clone RP24-491B24 from chromosome 3, complete sequence
          Length = 161119

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 518   aacagaaaatacttcaaaac 537
             ||||||||||||||||||||
Sbjct: 92845 aacagaaaatacttcaaaac 92826

---

>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 188300

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   tgaagacaaggggaaaagaa 224
             ||||||||||||||||||||
Sbjct: 13258 tgaagacaaggggaaaagaa 13239

---

>emb|AL353631.17| Human DNA sequence from clone RP11-5N16 on chromosome 9 Contains the 5'
             end of the gene for netrin G2 protein (KIAA1857) and three
             CpG islands, complete sequence
          Length = 97112

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 456   agtatcccattatggtctttattt 479
             ||||||||||||||||||| ||||
Sbjct: 60108 agtatcccattatggtcttgattt 60131

---

>emb|AL009179.1|HS97D16 Human DNA sequence from clone RP1-97D16 on chromosome 6p21.3-22.2
             Contains a novel pseudogene, a 60S Ribosomal protein L30
             (RPL30) pseudogene, H4 histone family member F pseudogene
             H4FFP and histone genes H2BFC, H2AFC, H3FK. Contains ESTs,
             STSs, GSSs and two CpG islands, complete sequence
          Length = 139904

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 47    ctttaactgaaaaacacaacagaa 70
             |||||||| |||||||||||||||
Sbjct: 91556 ctttaactaaaaaacacaacagaa 91533

---

>emb|AL929553.6| Mouse DNA sequence from clone RP24-316B1 on chromosome 4 Contains the
             5' end of a variant of the Ptprd gene for receptor type
             protein tyrosine phosphatase D and a CpG island, complete
             sequence
          Length = 163370

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   agacaaggggaaaagaaaat 227
             ||||||||||||||||||||
Sbjct: 37522 agacaaggggaaaagaaaat 37541

---

>gb|AC157551.6| Mus musculus chromosome 5, clone RP24-270K7, complete sequence
          Length = 171680

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   gaaaagaaaatacaacagta 236
             ||||||||||||||||||||
Sbjct: 21157 gaaaagaaaatacaacagta 21138

---

>gb|AC027308.5| Homo sapiens chromosome 5 clone CTB-56J15, complete sequence
          Length = 270154

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    agaatggcacacaatttaca 100
             ||||||||||||||||||||
Sbjct: 54796 agaatggcacacaatttaca 54777

---

>gb|AC020549.4|AC020549 Homo sapiens BAC clone RP11-172C16 from 11, complete sequence
          Length = 146841

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    caaggggaaaagaaaataca 230
              ||||||||||||||||||||
Sbjct: 140202 caaggggaaaagaaaataca 140221

---

>gb|AC007217.5| Homo sapiens chromosome 16 clone RP11-167B4, complete sequence
          Length = 173929

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    aactgaaaaacacaacagaa 70
             ||||||||||||||||||||
Sbjct: 79679 aactgaaaaacacaacagaa 79660

---

>gb|AC007750.3| Homo sapiens BAC clone RP11-576I16 from 2, complete sequence
          Length = 163681

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      tgacttacttttactgaaaa 22
              ||||||||||||||||||||
Sbjct: 151579 tgacttacttttactgaaaa 151560

---

>dbj|AB180731.1| Meriones unguiculatus immt mRNA for Immt-Es, complete cds
          Length = 2592

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 actccttctcaacttgttct 422
           ||||||||||||||||||||
Sbjct: 715 actccttctcaacttgttct 696

---

>dbj|AB180730.1| Meriones unguiculatus immt mRNA for Immt-Er, complete cds
          Length = 2592

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 actccttctcaacttgttct 422
           ||||||||||||||||||||
Sbjct: 715 actccttctcaacttgttct 696

---

>emb|BX119959.7| Mouse DNA sequence from clone RP23-346N16 on chromosome X, complete
              sequence
          Length = 193860

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     tactgaaaaagtgaaaataa 33
              ||||||||||||||||||||
Sbjct: 103574 tactgaaaaagtgaaaataa 103555

---

>dbj|AP002043.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJI6
          Length = 83912

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 46/55 (83%)
 Strand = Plus / Minus

                                                                    
Query: 465   ttatggtctttatttaactcagtaggaaccgatcgcacaagctttttcttnccaa 519
             ||||||||||| || | ||| || |||||||  || |||||||||||||| ||||
Sbjct: 70029 ttatggtctttgttcagctccgtgggaaccgtacgaacaagctttttcttgccaa 69975

---

>dbj|AP001301.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F8N14
          Length = 68639

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 46/55 (83%)
 Strand = Plus / Minus

                                                                    
Query: 465   ttatggtctttatttaactcagtaggaaccgatcgcacaagctttttcttnccaa 519
             ||||||||||| || | |||||| || ||||| || |||| ||||||||| ||||
Sbjct: 31760 ttatggtctttgttcagctcagtgggtaccgaacgaacaaactttttcttgccaa 31706

---

>gb|AF177401.1|AF177401 Spermophilus tridecemlineatus hormone-sensitive lipase (HSL) mRNA,
            complete cds
          Length = 2792

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 538  cactaccaaggaccttgagc 557
            ||||||||||||||||||||
Sbjct: 1103 cactaccaaggaccttgagc 1084

---

>emb|BX928749.12| Zebrafish DNA sequence from clone CH211-201A8 in linkage group 2,
             complete sequence
          Length = 215263

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    aatggcacacaatttacatt 102
             ||||||||||||||||||||
Sbjct: 44731 aatggcacacaatttacatt 44750

---

>gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome 3, complete sequence
          Length = 200505

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 518   aacagaaaatacttcaaaac 537
             ||||||||||||||||||||
Sbjct: 33354 aacagaaaatacttcaaaac 33335

---

>gb|AC126692.4| Mus musculus BAC clone RP23-246J18 from 6, complete sequence
          Length = 195236

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    tgaagacaaggggaaaagaa 224
              ||||||||||||||||||||
Sbjct: 119802 tgaagacaaggggaaaagaa 119783

---

>gb|AC156573.3| Mus musculus BAC clone RP23-133P6 from chromosome 15, complete sequence
          Length = 198278

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   gcttgccatccctgtgtccg 329
             ||||||||||||||||||||
Sbjct: 90735 gcttgccatccctgtgtccg 90754

---

>emb|AL627211.13| Mouse DNA sequence from clone RP23-104G20 on chromosome 4, complete
              sequence
          Length = 216944

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 209    gacaaggggaaaagaaaatacaac 232
              ||||||||||||| ||||||||||
Sbjct: 193809 gacaaggggaaaaaaaaatacaac 193832


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,990,493
Number of Sequences: 3902068
Number of extensions: 5990493
Number of successful extensions: 122726
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122488
Number of HSP's gapped (non-prelim): 234
length of query: 601
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 578
effective length of database: 17,143,297,704
effective search space: 9908826072912
effective search space used: 9908826072912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---