| Clone Name | rbags19m24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ISOA_PSEUM (P26501) Isoamylase precursor (EC 3.2.1.68) | 34 | 0.26 | 2 | ISOA_PSEAY (P10342) Isoamylase precursor (EC 3.2.1.68) | 34 | 0.26 | 3 | EEA1_MOUSE (Q8BL66) Early endosome antigen 1 | 31 | 1.7 | 4 | Y1342_ARATH (Q9C810) PHD finger protein At1g33420 | 31 | 2.2 | 5 | EUTT_ECOLI (P65643) Ethanolamine utilization cobalamin adenosylt... | 29 | 8.5 | 6 | EUTT_ECOL6 (P65644) Ethanolamine utilization cobalamin adenosylt... | 29 | 8.5 | 7 | CX022_HUMAN (Q6ZTR5) Protein CXorf22 | 29 | 8.5 |
|---|
>ISOA_PSEUM (P26501) Isoamylase precursor (EC 3.2.1.68)| Length = 776 Score = 33.9 bits (76), Expect = 0.26 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = -2 Query: 442 NTPEL-TKGDLYICFNASEEPASATLPAPAEGSVWLRLVDT 323 N P L +Y+ +N + TLPAP G+ W R+ DT Sbjct: 697 NGPSLGDSNSIYVAYNGWSSSVTFTLPAPPSGTQWYRVTDT 737
>ISOA_PSEAY (P10342) Isoamylase precursor (EC 3.2.1.68)| Length = 776 Score = 33.9 bits (76), Expect = 0.26 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = -2 Query: 442 NTPEL-TKGDLYICFNASEEPASATLPAPAEGSVWLRLVDT 323 N P L +Y+ +N + TLPAP G+ W R+ DT Sbjct: 697 NGPSLGDSNSIYVAYNGWSSSVTFTLPAPPSGTQWYRVTDT 737
>EEA1_MOUSE (Q8BL66) Early endosome antigen 1| Length = 1411 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 130 ISTKALKAESRRQQTYCFIRETGEDPSSIQIKHNCAL 240 + TKAL+ + + T ++E G + S+QIKH AL Sbjct: 1309 LQTKALELQRKLDNTTAAVQELGRENQSLQIKHTQAL 1345
>Y1342_ARATH (Q9C810) PHD finger protein At1g33420| Length = 697 Score = 30.8 bits (68), Expect = 2.2 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 7/90 (7%) Frame = -2 Query: 493 DPTSKFL-CMHIIAENDGNTPELTKGDLYICFNASEE------PASATLPAPAEGSVWLR 335 D +K L C H I + +T +L+ C S+E P L P +V Sbjct: 475 DAATKILDCKHFIKDYLSSTVNPVAINLWCCVELSDELKESPAPPPERLVLPLNATVSDL 534 Query: 334 LVDTSLTFPSFFTTESNLEVQQVLGYSSYE 245 ++ + F + EV+++LGY S + Sbjct: 535 KIEAAKAFQEVYAMFKRFEVEELLGYGSID 564
>EUTT_ECOLI (P65643) Ethanolamine utilization cobalamin adenosyltransferase (EC| 2.5.1.17) Length = 267 Score = 28.9 bits (63), Expect = 8.5 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%) Frame = +3 Query: 198 GRSLFDSNKTQ---LCAFTS*DEYPSTCCTSRLDSVVKKLGNVSDVSTKRNHTDPSAGAG 368 GR D + Q + TS DE+P CC V KK ++ +S ++ G Sbjct: 52 GRLFVDDEQQQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKMVAKSDPRLG 111 Query: 369 NVALAGSSLAL 401 A+ S++AL Sbjct: 112 FRAVLDSTIAL 122
>EUTT_ECOL6 (P65644) Ethanolamine utilization cobalamin adenosyltransferase (EC| 2.5.1.17) Length = 267 Score = 28.9 bits (63), Expect = 8.5 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%) Frame = +3 Query: 198 GRSLFDSNKTQ---LCAFTS*DEYPSTCCTSRLDSVVKKLGNVSDVSTKRNHTDPSAGAG 368 GR D + Q + TS DE+P CC V KK ++ +S ++ G Sbjct: 52 GRLFVDDEQQQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKMVAKSDPRLG 111 Query: 369 NVALAGSSLAL 401 A+ S++AL Sbjct: 112 FRAVLDSTIAL 122
>CX022_HUMAN (Q6ZTR5) Protein CXorf22| Length = 976 Score = 28.9 bits (63), Expect = 8.5 Identities = 13/53 (24%), Positives = 29/53 (54%) Frame = +1 Query: 124 QLISTKALKAESRRQQTYCFIRETGEDPSSIQIKHNCALLLHKMNILALVVLP 282 +L++T+ + ++ ++ +PS+ Q KH+C+L+L I ++V P Sbjct: 701 RLLTTRGIASQEEESVRRKVLKGLKSEPSTPQEKHDCSLMLTPKQIHQVIVGP 753 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,346,431 Number of Sequences: 219361 Number of extensions: 1401671 Number of successful extensions: 3532 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3467 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3532 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)