ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19m24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB102671.1| Hordeum vulgare Hviso2 mRNA for 85kDa isoamylase... 912 0.0
2gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
4gb|AY172633.3| Zea mays isoamylase-type starch debranching enzym... 80 8e-12
5gb|AC105403.2| Mus musculus BAC clone RP24-111L5 from 3, complet... 44 0.44
6gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, comple... 44 0.44
7gb|AC154326.1| Mus musculus chromosome 16 clone RP24-496J3, comp... 42 1.7
8emb|AL355985.18| Human DNA sequence from clone RP11-98O17 on chr... 42 1.7
9emb|AL356137.10| Human DNA sequence from clone RP11-515I12 on ch... 42 1.7
10gb|AC117661.20| Mus musculus chromosome 6, clone RP23-343P1, com... 42 1.7
11gb|AC097262.10| Homo sapiens X BAC RP11-268G12 (Roswell Park Can... 42 1.7
12emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 i... 42 1.7
13gb|AC174449.2| Mus musculus BAC clone RP23-338O19 from chromosom... 42 1.7
14emb|CT573091.1| Pan troglodytes chromosome X BAC RP43-060K07, co... 42 1.7
15ref|NM_010266.2| Mus musculus guanine deaminase (Gda), mRNA 40 6.9
16gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome... 40 6.9
17gb|DQ069583.1| Acorus americanus maturase K (matK) gene, partial... 40 6.9
18gb|AC125083.3| Mus musculus chromosome 19 clone RP24-98I2, compl... 40 6.9
19gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, c... 40 6.9
20gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome... 40 6.9
21gb|AC124431.4| Mus musculus BAC clone RP24-243J21 from chromosom... 40 6.9
22gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosom... 40 6.9
23gb|AC110263.9| Mus musculus chromosome 3, clone RP23-296I12, com... 40 6.9
24emb|BX908753.8| Zebrafish DNA sequence from clone RP71-80I17 in ... 40 6.9
25emb|AL450164.7| Human DNA sequence from clone RP11-550L8 on chro... 40 6.9
26gb|AC105180.8| Homo sapiens chromosome 8, clone RP11-345J1, comp... 40 6.9
27gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, ... 40 6.9
28dbj|AK139617.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 40 6.9
29dbj|AK157014.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.9
30dbj|AK149199.1| Mus musculus 2 days neonate sympathetic ganglion... 40 6.9
31dbj|AK079459.1| Mus musculus adult female vagina cDNA, RIKEN ful... 40 6.9
32dbj|AK079419.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 6.9
33gb|AF066057.1|MMGIIA1 Mus musculus glucosidase II alpha-subunit ... 40 6.9
34dbj|AK041056.1| Mus musculus adult male aorta and vein cDNA, RIK... 40 6.9
35emb|BX530075.7| Zebrafish DNA sequence from clone CH211-1O14 in ... 40 6.9
36dbj|AK173138.1| Mus musculus mRNA for mKIAA1258 protein 40 6.9
37dbj|AB017314.1| Acorus calamus chloroplast gene for maturase, pa... 40 6.9
38emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in... 40 6.9
39gb|AF174583.1|AF174583 Mus musculus guanine deaminase (Gda) mRNA... 40 6.9
40dbj|AB040155.1| Acorus gramineus chloroplast matK gene for matur... 40 6.9
41dbj|AB040154.1| Acorus calamus chloroplast matK gene for maturas... 40 6.9
42emb|AJ879453.1| Acorus calamus chloroplast, complete genome 40 6.9 
>dbj|AB102671.1| Hordeum vulgare Hviso2 mRNA for 85kDa isoamylase, complete cds
          Length = 2676

 Score =  912 bits (460), Expect = 0.0
 Identities = 460/460 (100%)
 Strand = Plus / Minus

                                                                        
Query: 50   tggaaattaggtataccatccattggacaaatgctaaatttattatcataaacattctca 109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2666 tggaaattaggtataccatccattggacaaatgctaaatttattatcataaacattctca 2607

                                                                        
Query: 110  gctacagtacatatcaacttatttcaaccaaagctctgaaagcagaaagtaggcgtcaac 169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2606 gctacagtacatatcaacttatttcaaccaaagctctgaaagcagaaagtaggcgtcaac 2547

                                                                        
Query: 170  agacttactgctttatccgagaaactggggaagatccctcttcgattcaaataaaacaca 229
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2546 agacttactgctttatccgagaaactggggaagatccctcttcgattcaaataaaacaca 2487

                                                                        
Query: 230  actgtgcgcttttacttcataagatgaatatcctagcacttgttgtacttccagattaga 289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2486 actgtgcgcttttacttcataagatgaatatcctagcacttgttgtacttccagattaga 2427

                                                                        
Query: 290  ctcggttgtaaagaaacttggaaacgtaagtgatgtatcaaccaaacgtaaccacacaga 349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2426 ctcggttgtaaagaaacttggaaacgtaagtgatgtatcaaccaaacgtaaccacacaga 2367

                                                                        
Query: 350  tccttctgcaggagcaggtaatgtagcacttgctggttcctcacttgcattgaaacatat 409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2366 tccttctgcaggagcaggtaatgtagcacttgctggttcctcacttgcattgaaacatat 2307

                                                                        
Query: 410  gtacaagtcacctttggttaactctggtgtattcccatcattttctgcgattatgtgcat 469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2306 gtacaagtcacctttggttaactctggtgtattcccatcattttctgcgattatgtgcat 2247

                                                    
Query: 470  gcaaagaaacttgctagtaggatcctcccatcgtggttca 509
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 gcaaagaaacttgctagtaggatcctcccatcgtggttca 2207
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>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0014C03, complete sequence
          Length = 143739

 Score =  131 bits (66), Expect = 2e-27
 Identities = 186/226 (82%)
 Strand = Plus / Plus

                                                                         
Query: 189   agaaactggggaagatccctcttcgattcaaataaaacacaactgtgcgcttttacttca 248
             ||||||| || |||| | ||||| |||||||||| ||||||| | |||||||  || | |
Sbjct: 23591 agaaactaggcaagagcgctctttgattcaaatagaacacaagtatgcgcttccacatga 23650

                                                                         
Query: 249   taagatgaatatcctagcacttgttgtacttccagattagactcggttgtaaagaaactt 308
             ||||| ||  ||||| |||||||||| || |   ||||||| ||||||| |||||||| |
Sbjct: 23651 taagaggataatcctggcacttgttgcaccttgggattagattcggttgcaaagaaacct 23710

                                                                         
Query: 309   ggaaacgtaagtgatgtatcaaccaaacgtaaccacacagatccttctgcaggagcaggt 368
             ||||| | ||||||||| |||||||| || |||||||| |||||||||||| ||||||| 
Sbjct: 23711 ggaaatgcaagtgatgtgtcaaccaagcgcaaccacacggatccttctgcaagagcaggc 23770

                                                           
Query: 369   aatgtagcacttgctggttcctcacttgcattgaaacatatgtaca 414
             || | ||||||  ||| ||||||  ||||||||||||| |||||||
Sbjct: 23771 aaggcagcactcactgattcctcgtttgcattgaaacagatgtaca 23816



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 460   ttatgtgcatgcaaagaaacttgctagtaggatcctccca 499
             ||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 23862 ttatgtgcatgcaaagaaagttgctggtaggatcatccca 23901
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  131 bits (66), Expect = 2e-27
 Identities = 186/226 (82%)
 Strand = Plus / Plus

                                                                            
Query: 189      agaaactggggaagatccctcttcgattcaaataaaacacaactgtgcgcttttacttca 248
                ||||||| || |||| | ||||| |||||||||| ||||||| | |||||||  || | |
Sbjct: 19010948 agaaactaggcaagagcgctctttgattcaaatagaacacaagtatgcgcttccacatga 19011007

                                                                            
Query: 249      taagatgaatatcctagcacttgttgtacttccagattagactcggttgtaaagaaactt 308
                ||||| ||  ||||| |||||||||| || |   ||||||| ||||||| |||||||| |
Sbjct: 19011008 taagaggataatcctggcacttgttgcaccttgggattagattcggttgcaaagaaacct 19011067

                                                                            
Query: 309      ggaaacgtaagtgatgtatcaaccaaacgtaaccacacagatccttctgcaggagcaggt 368
                ||||| | ||||||||| |||||||| || |||||||| |||||||||||| ||||||| 
Sbjct: 19011068 ggaaatgcaagtgatgtgtcaaccaagcgcaaccacacggatccttctgcaagagcaggc 19011127

                                                              
Query: 369      aatgtagcacttgctggttcctcacttgcattgaaacatatgtaca 414
                || | ||||||  ||| ||||||  ||||||||||||| |||||||
Sbjct: 19011128 aaggcagcactcactgattcctcgtttgcattgaaacagatgtaca 19011173



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 460      ttatgtgcatgcaaagaaacttgctagtaggatcctccca 499
                ||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 19011219 ttatgtgcatgcaaagaaagttgctggtaggatcatccca 19011258



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 80       atgctaaatttattatcataaaca 103
                ||||||||||| ||||||||||||
Sbjct: 12695444 atgctaaattttttatcataaaca 12695421
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>gb|AY172633.3| Zea mays isoamylase-type starch debranching enzyme ISO2 (iso2) mRNA,
            complete cds
          Length = 2829

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 299  aaagaaacttggaaacgtaagtgatgtatcaaccaaacgtaaccacacagatccttctgc 358
            |||||||| |||||| | |||||||||||||||||| || | |||||  |||||||||||
Sbjct: 2432 aaagaaacctggaaatgcaagtgatgtatcaaccaagcgcagccacatggatccttctgc 2373

                                                                        
Query: 359  aggagcaggtaatgtagcacttgctggttcctcacttgcattgaaacatatgtacaagtc 418
            |   || ||||| |||||||| ||||  |||||  ||||||||||||| || ||||| ||
Sbjct: 2372 aattgctggtaaagtagcactcgctgactcctcgtttgcattgaaacagatatacaaatc 2313

                
Query: 419  acct 422
            ||||
Sbjct: 2312 acct 2309



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 460  ttatgtgcatgcaaagaaacttgctagtaggatcctccca 499
            ||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 2271 ttatgtgcaagcaaagaaagttgctagtaggatcctccca 2232
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>gb|AC105403.2| Mus musculus BAC clone RP24-111L5 from 3, complete sequence
          Length = 141439

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 239    ttttacttcataagatgaatat 260
              ||||||||||||||||||||||
Sbjct: 109698 ttttacttcataagatgaatat 109677
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>gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, complete sequence
          Length = 170634

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 239    ttttacttcataagatgaatat 260
              ||||||||||||||||||||||
Sbjct: 168920 ttttacttcataagatgaatat 168941
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>gb|AC154326.1| Mus musculus chromosome 16 clone RP24-496J3, complete sequence
          Length = 167679

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     taaatttattatcataaacat 104
              |||||||||||||||||||||
Sbjct: 106467 taaatttattatcataaacat 106487
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>emb|AL355985.18| Human DNA sequence from clone RP11-98O17 on chromosome 9 Contains a
             putative novel pseudogene, complete sequence
          Length = 64969

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 462   atgtgcatgcaaagaaacttg 482
             |||||||||||||||||||||
Sbjct: 36008 atgtgcatgcaaagaaacttg 36028
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>emb|AL356137.10| Human DNA sequence from clone RP11-515I12 on chromosome 6, complete
             sequence
          Length = 135837

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     aacttggaaattttatataga 21
             |||||||||||||||||||||
Sbjct: 42901 aacttggaaattttatataga 42921
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>gb|AC117661.20| Mus musculus chromosome 6, clone RP23-343P1, complete sequence
          Length = 180209

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 87     atttattatcataaacattct 107
              |||||||||||||||||||||
Sbjct: 146337 atttattatcataaacattct 146317
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>gb|AC097262.10| Homo sapiens X BAC RP11-268G12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184942

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 76     acaaatgctaaatttattatc 96
              |||||||||||||||||||||
Sbjct: 102751 acaaatgctaaatttattatc 102731
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>emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 in linkage group 1,
              complete sequence
          Length = 171618

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 103    attctcagctacagtacatat 123
              |||||||||||||||||||||
Sbjct: 134180 attctcagctacagtacatat 134160
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>gb|AC174449.2| Mus musculus BAC clone RP23-338O19 from chromosome 6, complete sequence
          Length = 217169

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 87     atttattatcataaacattct 107
              |||||||||||||||||||||
Sbjct: 113169 atttattatcataaacattct 113149
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>emb|CT573091.1| Pan troglodytes chromosome X BAC RP43-060K07, complete sequence
          Length = 121895

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 76    acaaatgctaaatttattatc 96
             |||||||||||||||||||||
Sbjct: 54876 acaaatgctaaatttattatc 54856
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>ref|NM_010266.2| Mus musculus guanine deaminase (Gda), mRNA
          Length = 5417

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    cttggaaattttatatagagaaca 26
            ||||||||||| ||||||||||||
Sbjct: 2010 cttggaaatttaatatagagaaca 2033
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>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07,
             complete sequence
          Length = 136858

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 80    atgctaaatttattatcataaaca 103
             ||||||||||| ||||||||||||
Sbjct: 65731 atgctaaattttttatcataaaca 65708
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>gb|DQ069583.1| Acorus americanus maturase K (matK) gene, partial cds; chloroplast
          Length = 1527

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  ctaaatttattatcataaac 102
           ||||||||||||||||||||
Sbjct: 167 ctaaatttattatcataaac 148
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>gb|AC125083.3| Mus musculus chromosome 19 clone RP24-98I2, complete sequence
          Length = 172673

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 3      cttggaaattttatatagagaaca 26
              ||||||||||| ||||||||||||
Sbjct: 116240 cttggaaatttaatatagagaaca 116263
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>gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, complete sequence
          Length = 245390

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 3      cttggaaattttatatagagaaca 26
              ||||||||||| ||||||||||||
Sbjct: 224128 cttggaaatttaatatagagaaca 224105
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>gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome 18, complete sequence
          Length = 159308

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 371    tgtagcacttgctggttcct 390
              ||||||||||||||||||||
Sbjct: 121879 tgtagcacttgctggttcct 121898
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>gb|AC124431.4| Mus musculus BAC clone RP24-243J21 from chromosome 18, complete sequence
          Length = 143099

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    tgtagcacttgctggttcct 390
              ||||||||||||||||||||
Sbjct: 131779 tgtagcacttgctggttcct 131760
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>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete sequence
          Length = 175796

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    ctttatccgagaaactgggg 199
              ||||||||||||||||||||
Sbjct: 140663 ctttatccgagaaactgggg 140644
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>gb|AC110263.9| Mus musculus chromosome 3, clone RP23-296I12, complete sequence
          Length = 201908

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    ctaaatttattatcataaac 102
             ||||||||||||||||||||
Sbjct: 29425 ctaaatttattatcataaac 29444
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>emb|BX908753.8| Zebrafish DNA sequence from clone RP71-80I17 in linkage group 6,
             complete sequence
          Length = 93379

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   ataagatgaatatcctagca 267
             ||||||||||||||||||||
Sbjct: 30152 ataagatgaatatcctagca 30133
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>emb|AL450164.7| Human DNA sequence from clone RP11-550L8 on chromosome 6, complete
             sequence
          Length = 125051

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    agtatggaaattaggtatac 65
             ||||||||||||||||||||
Sbjct: 74165 agtatggaaattaggtatac 74146
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>gb|AC105180.8| Homo sapiens chromosome 8, clone RP11-345J1, complete sequence
          Length = 174617

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     tttatatagagaacaatggc 31
              ||||||||||||||||||||
Sbjct: 108143 tttatatagagaacaatggc 108162
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>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete
             Sequence, complete sequence
          Length = 220143

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   ctttatccgagaaactgggg 199
             ||||||||||||||||||||
Sbjct: 89324 ctttatccgagaaactgggg 89343
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>dbj|AK139617.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
            clone:B020006K13 product:guanine deaminase, full insert
            sequence
          Length = 2463

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    cttggaaattttatatagagaaca 26
            ||||||||||| ||||||||||||
Sbjct: 1780 cttggaaatttaatatagagaaca 1803
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>dbj|AK157014.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830112J01 product:guanine deaminase, full
            insert sequence
          Length = 2682

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    cttggaaattttatatagagaaca 26
            ||||||||||| ||||||||||||
Sbjct: 1972 cttggaaatttaatatagagaaca 1995
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>dbj|AK149199.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120492J04
           product:guanine deaminase, full insert sequence
          Length = 2517

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 3   cttggaaattttatatagagaaca 26
           ||||||||||| ||||||||||||
Sbjct: 87  cttggaaatttaatatagagaaca 110
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>dbj|AK079459.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
            library, clone:9930124E23 product:guanine deaminase, full
            insert sequence
          Length = 2149

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    cttggaaattttatatagagaaca 26
            ||||||||||| ||||||||||||
Sbjct: 1949 cttggaaatttaatatagagaaca 1972
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>dbj|AK079419.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830164E16 product:guanine deaminase, full
            insert sequence
          Length = 3477

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    cttggaaattttatatagagaaca 26
            ||||||||||| ||||||||||||
Sbjct: 1818 cttggaaatttaatatagagaaca 1841
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>gb|AF066057.1|MMGIIA1 Mus musculus glucosidase II alpha-subunit gene, exon sequence
          Length = 815

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 180 ctttatccgagaaactgggg 199
           ||||||||||||||||||||
Sbjct: 481 ctttatccgagaaactgggg 462
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>dbj|AK041056.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530072N21 product:guanine
            deaminase, full insert sequence
          Length = 2659

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    cttggaaattttatatagagaaca 26
            ||||||||||| ||||||||||||
Sbjct: 1949 cttggaaatttaatatagagaaca 1972
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>emb|BX530075.7| Zebrafish DNA sequence from clone CH211-1O14 in linkage group 5,
             complete sequence
          Length = 176078

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    atcataaacattctcagcta 113
             ||||||||||||||||||||
Sbjct: 82856 atcataaacattctcagcta 82875
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>dbj|AK173138.1| Mus musculus mRNA for mKIAA1258 protein
          Length = 4382

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    cttggaaattttatatagagaaca 26
            ||||||||||| ||||||||||||
Sbjct: 1939 cttggaaatttaatatagagaaca 1962
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>dbj|AB017314.1| Acorus calamus chloroplast gene for maturase, partial cds
          Length = 1109

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  ctaaatttattatcataaac 102
           ||||||||||||||||||||
Sbjct: 22  ctaaatttattatcataaac 3
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>emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in linkage group 1, complete
              sequence
          Length = 190793

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    attctcagctacagtacata 122
              ||||||||||||||||||||
Sbjct: 161780 attctcagctacagtacata 161761
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>gb|AF174583.1|AF174583 Mus musculus guanine deaminase (Gda) mRNA, complete cds
          Length = 3241

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    cttggaaattttatatagagaaca 26
            ||||||||||| ||||||||||||
Sbjct: 1936 cttggaaatttaatatagagaaca 1959
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>dbj|AB040155.1| Acorus gramineus chloroplast matK gene for maturase, complete cds
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  ctaaatttattatcataaac 102
           ||||||||||||||||||||
Sbjct: 167 ctaaatttattatcataaac 148
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>dbj|AB040154.1| Acorus calamus chloroplast matK gene for maturase, complete cds
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  ctaaatttattatcataaac 102
           ||||||||||||||||||||
Sbjct: 167 ctaaatttattatcataaac 148
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>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ctaaatttattatcataaac 102
            ||||||||||||||||||||
Sbjct: 3377 ctaaatttattatcataaac 3396


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,323,957
Number of Sequences: 3902068
Number of extensions: 5323957
Number of successful extensions: 102742
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102616
Number of HSP's gapped (non-prelim): 126
length of query: 509
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 487
effective length of database: 17,147,199,772
effective search space: 8350686288964
effective search space used: 8350686288964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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