>ref|XM_467429.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3201

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                        
Query: 533  tcttcctttggaggtttcttctcaaccttgggttttggctttggaatcctattgacacta 592
            |||||||| ||||||||||| || | |||||||||||| || || |||||||||||||||
Sbjct: 2696 tcttccttgggaggtttcttttctatcttgggttttggtttaggtatcctattgacacta 2637

                              
Query: 593  gagaccttatcttgtagg 610
            || |||||||||||||||
Sbjct: 2636 gaaaccttatcttgtagg 2619



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 390  ctaataatcacaactcatcatgagattctggttctgaatcgttagtctttt 440
            |||||||||||||||||||||||| ||| |||||| |||||| ||||||||
Sbjct: 2860 ctaataatcacaactcatcatgagcttcaggttctaaatcgtcagtctttt 2810



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 203  atgccctagagaccacaatactgctatacagggatt 238
            ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 3093 atgccatagagaccataatactgctatacagcgatt 3058

>dbj|AK100997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146N12, full
            insert sequence
          Length = 3201

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                        
Query: 533  tcttcctttggaggtttcttctcaaccttgggttttggctttggaatcctattgacacta 592
            |||||||| ||||||||||| || | |||||||||||| || || |||||||||||||||
Sbjct: 2696 tcttccttgggaggtttcttttctatcttgggttttggtttaggtatcctattgacacta 2637

                              
Query: 593  gagaccttatcttgtagg 610
            || |||||||||||||||
Sbjct: 2636 gaaaccttatcttgtagg 2619



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 390  ctaataatcacaactcatcatgagattctggttctgaatcgttagtctttt 440
            |||||||||||||||||||||||| ||| |||||| |||||| ||||||||
Sbjct: 2860 ctaataatcacaactcatcatgagcttcaggttctaaatcgtcagtctttt 2810



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 203  atgccctagagaccacaatactgctatacagggatt 238
            ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 3093 atgccatagagaccataatactgctatacagcgatt 3058

>gb|AY110979.1| Zea mays CL36581_1 mRNA sequence
          Length = 1101

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 554 tcaaccttgggttttggctttggaatcctattgacactagagaccttatcttgta 608
           |||||||| |||||||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 563 tcaaccttcggttttggttttggaatcctattgacacttgagaccttgtcttgta 617



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 397 tcacaactcatcatgagattctggttctgaatc 429
           ||||||||| ||||||| ||| |||||||||||
Sbjct: 385 tcacaactcgtcatgaggttcaggttctgaatc 417

>gb|AY105463.1| Zea mays PCO086874 mRNA sequence
          Length = 823

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 547 tttcttctcaaccttgggttttggctttggaatcctattgacactagagaccttatcttg 606
           |||||||||  ||||||||||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 667 tttcttctcggccttgggttttggttttggaattctgttgacacttgagaccttatcttg 608

             
Query: 607 ta 608
           ||
Sbjct: 607 ta 606

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                   
Query: 390      ctaataatcacaactcatcatgagattctggttctgaatcgttagtctttt 440
                |||||||||||||||||||||||| ||| |||||| |||||| ||||||||
Sbjct: 29475891 ctaataatcacaactcatcatgagcttcaggttctaaatcgtcagtctttt 29475841



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                            
Query: 533      tcttcctttggaggtttcttctcaaccttgggttttggctttggaatcctattgacacta 592
                |||||||| ||||||||||| || | |||||||||||| || || |||||||||||||||
Sbjct: 29475727 tcttccttgggaggtttcttttctatcttgggttttggtttaggtatcctattgacacta 29475668

                       
Query: 593      gagacct 599
                || ||||
Sbjct: 29475667 gaaacct 29475661



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 203      atgccctagagaccacaatactgctatacagggatt 238
                ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 29476124 atgccatagagaccataatactgctatacagcgatt 29476089

>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1038_A06
          Length = 147836

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                
Query: 390   ctaataatcacaactcatcatgagattctggttctgaatcgttagtctttt 440
             |||||||||||||||||||||||| ||| |||||| |||||| ||||||||
Sbjct: 70921 ctaataatcacaactcatcatgagcttcaggttctaaatcgtcagtctttt 70871



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                         
Query: 533   tcttcctttggaggtttcttctcaaccttgggttttggctttggaatcctattgacacta 592
             |||||||| ||||||||||| || | |||||||||||| || || |||||||||||||||
Sbjct: 70757 tcttccttgggaggtttcttttctatcttgggttttggtttaggtatcctattgacacta 70698

                    
Query: 593   gagacct 599
             || ||||
Sbjct: 70697 gaaacct 70691



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 203   atgccctagagaccacaatactgctatacagggatt 238
             ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 71154 atgccatagagaccataatactgctatacagcgatt 71119

>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1311_H06
          Length = 139868

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                 
Query: 390    ctaataatcacaactcatcatgagattctggttctgaatcgttagtctttt 440
              |||||||||||||||||||||||| ||| |||||| |||||| ||||||||
Sbjct: 126763 ctaataatcacaactcatcatgagcttcaggttctaaatcgtcagtctttt 126713



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                          
Query: 533    tcttcctttggaggtttcttctcaaccttgggttttggctttggaatcctattgacacta 592
              |||||||| ||||||||||| || | |||||||||||| || || |||||||||||||||
Sbjct: 126599 tcttccttgggaggtttcttttctatcttgggttttggtttaggtatcctattgacacta 126540

                     
Query: 593    gagacct 599
              || ||||
Sbjct: 126539 gaaacct 126533



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 203    atgccctagagaccacaatactgctatacagggatt 238
              ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 126996 atgccatagagaccataatactgctatacagcgatt 126961

>gb|AC116605.1| Homo sapiens chromosome 5 clone RP11-443O6, complete sequence
          Length = 164774

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 106   gttatcaaaatataaatgagttt 128
             |||||||||||||||||||||||
Sbjct: 82474 gttatcaaaatataaatgagttt 82496

>gb|AC106811.2| Homo sapiens chromosome 5 clone RP11-551B15, complete sequence
          Length = 148362

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 106  gttatcaaaatataaatgagttt 128
            |||||||||||||||||||||||
Sbjct: 5607 gttatcaaaatataaatgagttt 5629

>gb|AY458646.2| Uncultured bacterium 578 clone EBAC080-L31E09 genomic sequence
          Length = 78078

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 346   agtatattgagcagtatctct 366
             |||||||||||||||||||||
Sbjct: 53130 agtatattgagcagtatctct 53110

>emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in linkage group 15,
             complete sequence
          Length = 179357

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   actgctatacagggatttata 242
             |||||||||||||||||||||
Sbjct: 87653 actgctatacagggatttata 87633

>ref|XM_445735.1| Candida glabrata CBS138, CAGL0E01089g partial mRNA
          Length = 2562

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 558  ccttgggttttggctttggaa 578
            |||||||||||||||||||||
Sbjct: 1843 ccttgggttttggctttggaa 1863

>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence
          Length = 687501

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   ccttgggttttggctttggaa 578
             |||||||||||||||||||||
Sbjct: 97301 ccttgggttttggctttggaa 97281

>gb|AC153837.4| Mus musculus 6 BAC RP23-192D5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 232039

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 100    gtagctgttatcaaaatataa 120
              |||||||||||||||||||||
Sbjct: 212740 gtagctgttatcaaaatataa 212760

>emb|AL691456.7| Mouse DNA sequence from clone RP23-468K2 on chromosome 4 Contains part
             of the Astn2 gene for astrotactin 2 and the Trim32 gene
             for tripartite motif protein 32, complete sequence
          Length = 158960

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 433   agtcttttccggggcatctga 453
             |||||||||||||||||||||
Sbjct: 19411 agtcttttccggggcatctga 19431

>ref|XM_623868.1| PREDICTED: Apis mellifera similar to ENSANGP00000013944
           (LOC551473), mRNA
          Length = 792

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  tatagtagctgttatcaaaat 116
           |||||||||||||||||||||
Sbjct: 400 tatagtagctgttatcaaaat 380

>gb|AC138277.16| Mus musculus chromosome 1, clone RP23-67I1, complete sequence
          Length = 216155

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 546    gtttcttctcaaccttgggtt 566
              |||||||||||||||||||||
Sbjct: 185734 gtttcttctcaaccttgggtt 185754

>gb|AC120217.13| Mus musculus chromosome 1, clone RP24-542K6, complete sequence
          Length = 164016

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 546   gtttcttctcaaccttgggtt 566
             |||||||||||||||||||||
Sbjct: 97460 gtttcttctcaaccttgggtt 97440

>gb|AC132305.3| Mus musculus BAC clone RP24-286A19 from 6, complete sequence
          Length = 187465

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 100   gtagctgttatcaaaatataa 120
             |||||||||||||||||||||
Sbjct: 37955 gtagctgttatcaaaatataa 37975

>gb|AC129093.34| Mus musculus strain C57BL/6J clone rp23-198m10 map 19, complete
             sequence
          Length = 190697

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 579   tcctattgacactagagacc 598
             ||||||||||||||||||||
Sbjct: 92609 tcctattgacactagagacc 92628

>ref|XM_638005.1| Dictyostelium discoideum hypothetical protein (DDB0217802), partial
           mRNA
          Length = 5604

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 10  tttaactgaaagttcacaac 29
           ||||||||||||||||||||
Sbjct: 510 tttaactgaaagttcacaac 529

>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence
          Length = 219218

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 317   caaaactgtggtacaaactatctt 340
             |||||||||| |||||||||||||
Sbjct: 48873 caaaactgtgttacaaactatctt 48850

>gb|AY375291.1| Buchnera aphidicola (Chaitophorus populeti)
            phosphoribosylformimino-5-aminoimidazole carboxamide
            ribotide isomerase (hisA) gene, partial cds; imidazole
            glycerol phosphatase synthase subunit (hisF), histidine
            biosynthesis bifunctional protein (hisIE),
            6-phosphogluconate dehydrogenase (gnd), 2-isopropylmalate
            synthase (leuA), 3-isopropylmalate dehydratase small
            subunit (leuD), 3-isopropylmalate dehydratase large
            subunit (leuC), and 3-isopropylmalate dehydrogenase
            (leuB) genes, complete cds; and deoxycytidine
            triphosphate deaminase (dcd) gene, partial cds
          Length = 8619

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  gttatcaaaatataaatgag 125
            ||||||||||||||||||||
Sbjct: 7237 gttatcaaaatataaatgag 7256

>gb|AC141563.3| Mus musculus BAC clone RP23-410M22 from chromosome 6, complete sequence
          Length = 186983

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 573   ttggaatcctattgacactagaga 596
             ||||||||||| ||||||||||||
Sbjct: 96563 ttggaatcctagtgacactagaga 96586

>gb|AC127412.4| Mus musculus BAC clone RP23-234O14 from chromosome 16, complete
             sequence
          Length = 225685

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 30    aatgcgtgatagacagtatgaaagagct 57
             ||||| |||||||||| |||||||||||
Sbjct: 33282 aatgcatgatagacagcatgaaagagct 33255

>emb|AL450321.15| Mouse DNA sequence from clone RP23-232M10 on chromosome 13 Contains a
             novel gene, a non-POU domain containing octamer-binding
             protein (Nono) pseudogene, a Sin3-associated polypeptide
             18 (Sap18) pseudogene, the 5' end of a novel gene and a
             CpG island, complete sequence
          Length = 209175

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   caaaatataaatgagtttca 130
             ||||||||||||||||||||
Sbjct: 61562 caaaatataaatgagtttca 61543

>gb|AC090578.6| Homo sapiens chromosome 8, clone RP11-642C5, complete sequence
          Length = 187209

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    aaaatataaatgagtttcag 131
              ||||||||||||||||||||
Sbjct: 116768 aaaatataaatgagtttcag 116787

>gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, complete sequence
          Length = 173808

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   gatttatatcaaattcttct 254
             ||||||||||||||||||||
Sbjct: 58015 gatttatatcaaattcttct 57996

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 398     cacaactcatcatgagattc 417
               ||||||||||||||||||||
Sbjct: 4993072 cacaactcatcatgagattc 4993053

>gb|AC115606.2| Dictyostelium discoideum chromosome 2 map 159760-209066 strain AX4,
             complete sequence
          Length = 49306

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    tttaactgaaagttcacaac 29
             ||||||||||||||||||||
Sbjct: 21861 tttaactgaaagttcacaac 21842

>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0049I08
          Length = 144379

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   cacaactcatcatgagattc 417
             ||||||||||||||||||||
Sbjct: 34761 cacaactcatcatgagattc 34742

>gb|AC122247.5| Mus musculus BAC clone RP23-155D8 from 16, complete sequence
          Length = 208505

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 30    aatgcgtgatagacagtatgaaagagct 57
             ||||| |||||||||| |||||||||||
Sbjct: 18924 aatgcatgatagacagcatgaaagagct 18951

>gb|AC138106.9| Mus musculus chromosome 1, clone RP23-278C19, complete sequence
          Length = 173026

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 579   tcctattgacactagagacc 598
             ||||||||||||||||||||
Sbjct: 46601 tcctattgacactagagacc 46582


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,191,181
Number of Sequences: 3902068
Number of extensions: 5191181
Number of successful extensions: 93767
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93624
Number of HSP's gapped (non-prelim): 143
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)