| Clone Name | rbags19m20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464386.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1076 Score = 482 bits (243), Expect = e-133 Identities = 435/499 (87%) Strand = Plus / Minus Query: 152 cacggaacggagcagctccagggaagttgccagccctaggaaatgcgacagtatggtgtt 211 |||||| || |||| ||||||||| | ||||| || |||||||||||||| ||| |||| Sbjct: 864 cacggagcgcagcaactccagggagctcgccaggccaaggaaatgcgacaggatgatgtt 805 Query: 212 cgctgaagcctgaaccaggaatacatctagagccaaaacaggactttgaccagcggaagt 271 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 804 cgctgaagcctgaactaggaaaacatctagagccaaaacaggactttgaccaggggaagt 745 Query: 272 tgtctgataataggggactgcagaggtagtaagggcttttgctaccaaagcaccaacaag 331 || ||||| || || ||||||||||||||||| || || ||||||||||| |||||| Sbjct: 744 tgcttgatagtaaggtactgcagaggtagtaagagccttcgctaccaaagccccaacagt 685 Query: 332 tgcctgcataccgagaacagctgcgcccatcccaagaatattgagcacaatgccattttt 391 ||| ||||| |||||||| || || |||||||| || ||||||||||||||||||||||| Sbjct: 684 tgcttgcatgccgagaactgcagcacccatcccgagcatattgagcacaatgccattttt 625 Query: 392 cagacttttaatcacatcagcccgtggaggagcctttgcgggtgcgcttgctgttttccg 451 ||||||| |||| |||||||| |||||||||||||| || ||| | ||||||||||| | Sbjct: 624 cagacttctaattacatcagcacgtggaggagccttagcaggttcacttgctgtttttct 565 Query: 452 tagtctttcagacagacggatgtaaccaaatgaccagaagactgagataaaagctgcagc 511 ||||||||||| || ||||||||||||||||||||||||||||| |||||| | || || Sbjct: 564 aagtctttcagaaaggcggatgtaaccaaatgaccagaagactgaaataaaacccgcggc 505 Query: 512 aacaccagcagcagttgtgtagaatgtaaagggcgatgtaaccttcccagtaacaactgt 571 || |||||||||||||| ||||||||||| || | ||| ||||||||||||| |||||| Sbjct: 504 aataccagcagcagttgcatagaatgtaaaaggtgctgtcaccttcccagtaataactgt 445 Query: 572 ggagaatgacaaaattccagcagaaacaaacgtgcacaccaactgggaccagaaccctag 631 || ||||||||||||||||| ||||||| ||| |||||||||||||||||||||| || Sbjct: 444 agaaaatgacaaaattccagcggaaacaactgtggacaccaactgggaccagaacccaag 385 Query: 632 ggtacccaagttcttgaaa 650 |||||||| ||||||||| Sbjct: 384 agtacccaaattcttgaaa 366
>dbj|AK109387.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D08, full insert sequence Length = 1010 Score = 482 bits (243), Expect = e-133 Identities = 435/499 (87%) Strand = Plus / Minus Query: 152 cacggaacggagcagctccagggaagttgccagccctaggaaatgcgacagtatggtgtt 211 |||||| || |||| ||||||||| | ||||| || |||||||||||||| ||| |||| Sbjct: 826 cacggagcgcagcaactccagggagctcgccaggccaaggaaatgcgacaggatgatgtt 767 Query: 212 cgctgaagcctgaaccaggaatacatctagagccaaaacaggactttgaccagcggaagt 271 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 766 cgctgaagcctgaactaggaaaacatctagagccaaaacaggactttgaccaggggaagt 707 Query: 272 tgtctgataataggggactgcagaggtagtaagggcttttgctaccaaagcaccaacaag 331 || ||||| || || ||||||||||||||||| || || ||||||||||| |||||| Sbjct: 706 tgcttgatagtaaggtactgcagaggtagtaagagccttcgctaccaaagccccaacagt 647 Query: 332 tgcctgcataccgagaacagctgcgcccatcccaagaatattgagcacaatgccattttt 391 ||| ||||| |||||||| || || |||||||| || ||||||||||||||||||||||| Sbjct: 646 tgcttgcatgccgagaactgcagcacccatcccgagcatattgagcacaatgccattttt 587 Query: 392 cagacttttaatcacatcagcccgtggaggagcctttgcgggtgcgcttgctgttttccg 451 ||||||| |||| |||||||| |||||||||||||| || ||| | ||||||||||| | Sbjct: 586 cagacttctaattacatcagcacgtggaggagccttagcaggttcacttgctgtttttct 527 Query: 452 tagtctttcagacagacggatgtaaccaaatgaccagaagactgagataaaagctgcagc 511 ||||||||||| || ||||||||||||||||||||||||||||| |||||| | || || Sbjct: 526 aagtctttcagaaaggcggatgtaaccaaatgaccagaagactgaaataaaacccgcggc 467 Query: 512 aacaccagcagcagttgtgtagaatgtaaagggcgatgtaaccttcccagtaacaactgt 571 || |||||||||||||| ||||||||||| || | ||| ||||||||||||| |||||| Sbjct: 466 aataccagcagcagttgcatagaatgtaaaaggtgctgtcaccttcccagtaataactgt 407 Query: 572 ggagaatgacaaaattccagcagaaacaaacgtgcacaccaactgggaccagaaccctag 631 || ||||||||||||||||| ||||||| ||| |||||||||||||||||||||| || Sbjct: 406 agaaaatgacaaaattccagcggaaacaactgtggacaccaactgggaccagaacccaag 347 Query: 632 ggtacccaagttcttgaaa 650 |||||||| ||||||||| Sbjct: 346 agtacccaaattcttgaaa 328
>dbj|AK069783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030E23, full insert sequence Length = 999 Score = 482 bits (243), Expect = e-133 Identities = 435/499 (87%) Strand = Plus / Minus Query: 152 cacggaacggagcagctccagggaagttgccagccctaggaaatgcgacagtatggtgtt 211 |||||| || |||| ||||||||| | ||||| || |||||||||||||| ||| |||| Sbjct: 808 cacggagcgcagcaactccagggagctcgccaggccaaggaaatgcgacaggatgatgtt 749 Query: 212 cgctgaagcctgaaccaggaatacatctagagccaaaacaggactttgaccagcggaagt 271 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 748 cgctgaagcctgaactaggaaaacatctagagccaaaacaggactttgaccaggggaagt 689 Query: 272 tgtctgataataggggactgcagaggtagtaagggcttttgctaccaaagcaccaacaag 331 || ||||| || || ||||||||||||||||| || || ||||||||||| |||||| Sbjct: 688 tgcttgatagtaaggtactgcagaggtagtaagagccttcgctaccaaagccccaacagt 629 Query: 332 tgcctgcataccgagaacagctgcgcccatcccaagaatattgagcacaatgccattttt 391 ||| ||||| |||||||| || || |||||||| || ||||||||||||||||||||||| Sbjct: 628 tgcttgcatgccgagaactgcagcacccatcccgagcatattgagcacaatgccattttt 569 Query: 392 cagacttttaatcacatcagcccgtggaggagcctttgcgggtgcgcttgctgttttccg 451 ||||||| |||| |||||||| |||||||||||||| || ||| | ||||||||||| | Sbjct: 568 cagacttctaattacatcagcacgtggaggagccttagcaggttcacttgctgtttttct 509 Query: 452 tagtctttcagacagacggatgtaaccaaatgaccagaagactgagataaaagctgcagc 511 ||||||||||| || ||||||||||||||||||||||||||||| |||||| | || || Sbjct: 508 aagtctttcagaaaggcggatgtaaccaaatgaccagaagactgaaataaaacccgcggc 449 Query: 512 aacaccagcagcagttgtgtagaatgtaaagggcgatgtaaccttcccagtaacaactgt 571 || |||||||||||||| ||||||||||| || | ||| ||||||||||||| |||||| Sbjct: 448 aataccagcagcagttgcatagaatgtaaaaggtgctgtcaccttcccagtaataactgt 389 Query: 572 ggagaatgacaaaattccagcagaaacaaacgtgcacaccaactgggaccagaaccctag 631 || ||||||||||||||||| ||||||| ||| |||||||||||||||||||||| || Sbjct: 388 agaaaatgacaaaattccagcggaaacaactgtggacaccaactgggaccagaacccaag 329 Query: 632 ggtacccaagttcttgaaa 650 |||||||| ||||||||| Sbjct: 328 agtacccaaattcttgaaa 310
>gb|BT017876.1| Zea mays clone EL01N0513D08.c mRNA sequence Length = 1200 Score = 434 bits (219), Expect = e-118 Identities = 431/502 (85%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 149 tgacacggaacggagcagctccagggaagttgccagccctaggaaatgcgacagtatggt 208 |||||| || || |||||||||||||| | |||| ||| |||||||||||||| ||||| Sbjct: 857 tgacaccgagcgcagcagctccagggagctcgccaccccaaggaaatgcgacaggatggt 798 Query: 209 gttcgctgaagcctgaaccaggaatacatctagagccaaaacaggactttgaccagcgga 268 |||||||||||||||||| ||||| ||||||| |||||| ||||| ||||| ||||| | Sbjct: 797 gttcgctgaagcctgaactaggaaaacatctaaagccaagacagggctttggccagcagc 738 Query: 269 agttgtctgataataggggactgcagaggtagtaagggcttttgctaccaaagcaccaac 328 |||||||||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 737 ------ctgataatagggtactgcagaggttgtgagagcttttgctaccaaagcaccaac 684 Query: 329 aagtgcctgcataccgagaacagctgcgcccatcccaagaatattgagcacaatgccatt 388 | || ||||| ||||||||||| |||||||||||||||||||| | ||| |||||||| Sbjct: 683 agtagcttgcatgccgagaacagcagcgcccatcccaagaatattaaccacgatgccatt 624 Query: 389 tttcagacttttaatcacatcagcccgtggaggagcctttgcgggtgcgcttgctgtttt 448 ||| || || |||| |||||||| |||||||||||||| || ||| | | | |||||| Sbjct: 623 tttaaggctcttaacaacatcagcacgtggaggagccttagcaggttctttggatgtttt 564 Query: 449 ccgtagtctttcagacagacggatgtaaccaaatgaccagaagactgagataaaagctgc 508 | || |||||||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 563 tctaagcctttcagagagacggatgtaaccaaatgaccagaagactgaaataaaagcagc 504 Query: 509 agcaacaccagcagcagttgtgtagaatgtaaagggcgatgtaaccttcccagtaacaac 568 ||||| |||||||||||||| |||||||||||||| ||||| |||||||| || ||||| Sbjct: 503 agcaataccagcagcagttgcatagaatgtaaagggtgatgtcaccttccccgttacaac 444 Query: 569 tgtggagaatgacaaaattccagcagaaacaaacgtgcacaccaactgggaccagaaccc 628 ||| ||||||| ||||||||||||||||| || ||||||||||| |||||||||||||| Sbjct: 443 tgtagagaatgccaaaattccagcagaaataattgtgcacaccaattgggaccagaaccc 384 Query: 629 tagggtacccaagttcttgaaa 650 ||||||||||| ||||||||| Sbjct: 383 cagggtacccaaattcttgaaa 362
>gb|BT017168.1| Zea mays clone EL01N0368H03.c mRNA sequence Length = 1170 Score = 434 bits (219), Expect = e-118 Identities = 431/502 (85%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 149 tgacacggaacggagcagctccagggaagttgccagccctaggaaatgcgacagtatggt 208 |||||| || || |||||||||||||| | |||| ||| |||||||||||||| ||||| Sbjct: 862 tgacaccgagcgcagcagctccagggagctcgccaccccaaggaaatgcgacaggatggt 803 Query: 209 gttcgctgaagcctgaaccaggaatacatctagagccaaaacaggactttgaccagcgga 268 |||||||||||||||||| ||||| ||||||| |||||| ||||| ||||| ||||| | Sbjct: 802 gttcgctgaagcctgaactaggaaaacatctaaagccaagacagggctttggccagcagc 743 Query: 269 agttgtctgataataggggactgcagaggtagtaagggcttttgctaccaaagcaccaac 328 |||||||||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 742 ------ctgataatagggtactgcagaggttgtgagagcttttgctaccaaagcaccaac 689 Query: 329 aagtgcctgcataccgagaacagctgcgcccatcccaagaatattgagcacaatgccatt 388 | || ||||| ||||||||||| |||||||||||||||||||| | ||| |||||||| Sbjct: 688 agtagcttgcatgccgagaacagcagcgcccatcccaagaatattaaccacgatgccatt 629 Query: 389 tttcagacttttaatcacatcagcccgtggaggagcctttgcgggtgcgcttgctgtttt 448 ||| || || |||| |||||||| |||||||||||||| || ||| | | | |||||| Sbjct: 628 tttaaggctcttaacaacatcagcacgtggaggagccttagcaggttctttggatgtttt 569 Query: 449 ccgtagtctttcagacagacggatgtaaccaaatgaccagaagactgagataaaagctgc 508 | || |||||||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 568 tctaagcctttcagagagacggatgtaaccaaatgaccagaagactgaaataaaagcagc 509 Query: 509 agcaacaccagcagcagttgtgtagaatgtaaagggcgatgtaaccttcccagtaacaac 568 ||||| |||||||||||||| |||||||||||||| ||||| |||||||| || ||||| Sbjct: 508 agcaataccagcagcagttgcatagaatgtaaagggtgatgtcaccttccccgttacaac 449 Query: 569 tgtggagaatgacaaaattccagcagaaacaaacgtgcacaccaactgggaccagaaccc 628 ||| ||||||| ||||||||||||||||| || ||||||||||| |||||||||||||| Sbjct: 448 tgtagagaatgccaaaattccagcagaaataattgtgcacaccaattgggaccagaaccc 389 Query: 629 tagggtacccaagttcttgaaa 650 ||||||||||| ||||||||| Sbjct: 388 cagggtacccaaattcttgaaa 367
>gb|BT018285.1| Zea mays clone EL01T0205B03.c mRNA sequence Length = 1237 Score = 414 bits (209), Expect = e-112 Identities = 419/489 (85%) Strand = Plus / Minus Query: 162 agcagctccagggaagttgccagccctaggaaatgcgacagtatggtgttcgctgaagcc 221 |||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||| Sbjct: 804 agcagctccagggagctcgccagcccgaggaaatgcgacaggatggtgttcgctgaagcc 745 Query: 222 tgaaccaggaatacatctagagccaaaacaggactttgaccagcggaagttgtctgataa 281 ||||| ||||| ||||||| ||||| ||||| ||||| || | | || | ||||||| Sbjct: 744 tgaactaggaaaacatctaaggccaacacagggctttggcctggagcagcagcctgataa 685 Query: 282 taggggactgcagaggtagtaagggcttttgctaccaaagcaccaacaagtgcctgcata 341 ||||| ||||||||||| || || ||||||||||||||||||||||| || ||||| Sbjct: 684 tagggaactgcagaggttgtgagagcttttgctaccaaagcaccaacggtggcttgcatg 625 Query: 342 ccgagaacagctgcgcccatcccaagaatattgagcacaatgccatttttcagactttta 401 || |||||||| ||||||||||| |||||||| |||||||||||||||||||| || ||| Sbjct: 624 cccagaacagcggcgcccatcccgagaatattcagcacaatgccatttttcaggctatta 565 Query: 402 atcacatcagcccgtggaggagcctttgcgggtgcgcttgctgttttccgtagtctttca 461 | ||||| || |||||||||||||| || ||| | ||| |||| | | || |||||| Sbjct: 564 acaacatcggcgcgtggaggagccttagcaggttcctttgatgttcttctaagcctttca 505 Query: 462 gacagacggatgtaaccaaatgaccagaagactgagataaaagctgcagcaacaccagca 521 || ||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| Sbjct: 504 gagagacggatgtaaccaaatgaccagaaggatgagataaaagcagcagcaataccagca 445 Query: 522 gcagttgtgtagaatgtaaagggcgatgtaaccttcccagtaacaactgtggagaatgac 581 ||||| | |||||||||||||| | ||| |||||||| || |||||||| ||||||| | Sbjct: 444 gcagtcgcatagaatgtaaagggtgctgtcaccttccccgttacaactgtagagaatgcc 385 Query: 582 aaaattccagcagaaacaaacgtgcacaccaactgggaccagaaccctagggtacccaag 641 |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 384 aaaattccagcagagacaattgtgcacaccaactgggaccagaaccccagggtacccaaa 325 Query: 642 ttcttgaaa 650 ||||||||| Sbjct: 324 ttcttgaaa 316
>gb|AY104426.1| Zea mays PCO147781 mRNA sequence Length = 716 Score = 278 bits (140), Expect = 2e-71 Identities = 307/363 (84%), Gaps = 6/363 (1%) Strand = Plus / Minus Query: 149 tgacacggaacggagcagctccagggaagttgccagccctaggaaatgcgacagtatggt 208 |||||| || || |||||||||||||| | |||| ||| |||||||||||||| ||||| Sbjct: 358 tgacaccgagcgcagcagctccagggagctcgccaccccaaggaaatgcgacaggatggt 299 Query: 209 gttcgctgaagcctgaaccaggaatacatctagagccaaaacaggactttgaccagcgga 268 |||||||||||||||||| ||||| ||||||| |||||| ||||| ||||| ||||| | Sbjct: 298 gttcgctgaagcctgaactaggaaaacatctaaagccaagacagggctttggccagcagc 239 Query: 269 agttgtctgataataggggactgcagaggtagtaagggcttttgctaccaaagcaccaac 328 |||||||||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 238 ------ctgataatagggtactgcagaggttgtgagagcttttgctaccaaagcaccaac 185 Query: 329 aagtgcctgcataccgagaacagctgcgcccatcccaagaatattgagcacaatgccatt 388 | || ||||| ||||||||||| |||||||||||||||||||| | ||| |||||||| Sbjct: 184 agtagcttgcatgccgagaacagcagcgcccatcccaagaatattaaccacgatgccatt 125 Query: 389 tttcagacttttaatcacatcagcccgtggaggagcctttgcgggtgcgcttgctgtttt 448 ||| || || |||| |||||||| |||||||||||||| || ||| | | | |||||| Sbjct: 124 tttaaggctcttaacaacatcagcacgtggaggagccttagcaggttctttggatgtttt 65 Query: 449 ccgtagtctttcagacagacggatgtaaccaaatgaccagaagactgagataaaagctgc 508 | || |||||||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 64 tctaagcctttcagagagacggatgtaaccaaatgaccagaagactgaaataaaagcagc 5 Query: 509 agc 511 ||| Sbjct: 4 agc 2
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 220 bits (111), Expect = 4e-54 Identities = 183/207 (88%) Strand = Plus / Minus Query: 220 cctgaaccaggaatacatctagagccaaaacaggactttgaccagcggaagttgtctgat 279 ||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 4861598 cctgaactaggaaaacatctagagccaaaacaggactttgaccaggggaagttgcttgat 4861539 Query: 280 aataggggactgcagaggtagtaagggcttttgctaccaaagcaccaacaagtgcctgca 339 | || || ||||||||||||||||| || || ||||||||||| |||||| ||| |||| Sbjct: 4861538 agtaaggtactgcagaggtagtaagagccttcgctaccaaagccccaacagttgcttgca 4861479 Query: 340 taccgagaacagctgcgcccatcccaagaatattgagcacaatgccatttttcagacttt 399 | |||||||| || || |||||||| || |||||||||||||||||||||||||||||| Sbjct: 4861478 tgccgagaactgcagcacccatcccgagcatattgagcacaatgccatttttcagacttc 4861419 Query: 400 taatcacatcagcccgtggaggagcct 426 |||| |||||||| ||||||||||||| Sbjct: 4861418 taattacatcagcacgtggaggagcct 4861392 Score = 216 bits (109), Expect = 7e-53 Identities = 187/213 (87%) Strand = Plus / Minus Query: 438 cttgctgttttccgtagtctttcagacagacggatgtaaccaaatgaccagaagactgag 497 ||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 4861148 cttgctgtttttctaagtctttcagaaaggcggatgtaaccaaatgaccagaagactgaa 4861089 Query: 498 ataaaagctgcagcaacaccagcagcagttgtgtagaatgtaaagggcgatgtaaccttc 557 |||||| | || |||| |||||||||||||| ||||||||||| || | ||| |||||| Sbjct: 4861088 ataaaacccgcggcaataccagcagcagttgcatagaatgtaaaaggtgctgtcaccttc 4861029 Query: 558 ccagtaacaactgtggagaatgacaaaattccagcagaaacaaacgtgcacaccaactgg 617 ||||||| |||||| || ||||||||||||||||| ||||||| ||| ||||||||||| Sbjct: 4861028 ccagtaataactgtagaaaatgacaaaattccagcggaaacaactgtggacaccaactgg 4860969 Query: 618 gaccagaaccctagggtacccaagttcttgaaa 650 ||||||||||| || |||||||| ||||||||| Sbjct: 4860968 gaccagaacccaagagtacccaaattcttgaaa 4860936 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 152 cacggaacggagcagctccagggaagttgccagccctaggaaatgcgacagtatggtgtt 211 |||||| || |||| ||||||||| | ||||| || |||||||||||||| ||| |||| Sbjct: 4862571 cacggagcgcagcaactccagggagctcgccaggccaaggaaatgcgacaggatgatgtt 4862512 Query: 212 cgctgaagcctg 223 |||||||||||| Sbjct: 4862511 cgctgaagcctg 4862500
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 220 bits (111), Expect = 4e-54 Identities = 183/207 (88%) Strand = Plus / Minus Query: 220 cctgaaccaggaatacatctagagccaaaacaggactttgaccagcggaagttgtctgat 279 ||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 103757 cctgaactaggaaaacatctagagccaaaacaggactttgaccaggggaagttgcttgat 103698 Query: 280 aataggggactgcagaggtagtaagggcttttgctaccaaagcaccaacaagtgcctgca 339 | || || ||||||||||||||||| || || ||||||||||| |||||| ||| |||| Sbjct: 103697 agtaaggtactgcagaggtagtaagagccttcgctaccaaagccccaacagttgcttgca 103638 Query: 340 taccgagaacagctgcgcccatcccaagaatattgagcacaatgccatttttcagacttt 399 | |||||||| || || |||||||| || |||||||||||||||||||||||||||||| Sbjct: 103637 tgccgagaactgcagcacccatcccgagcatattgagcacaatgccatttttcagacttc 103578 Query: 400 taatcacatcagcccgtggaggagcct 426 |||| |||||||| ||||||||||||| Sbjct: 103577 taattacatcagcacgtggaggagcct 103551 Score = 216 bits (109), Expect = 7e-53 Identities = 187/213 (87%) Strand = Plus / Minus Query: 438 cttgctgttttccgtagtctttcagacagacggatgtaaccaaatgaccagaagactgag 497 ||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 103307 cttgctgtttttctaagtctttcagaaaggcggatgtaaccaaatgaccagaagactgaa 103248 Query: 498 ataaaagctgcagcaacaccagcagcagttgtgtagaatgtaaagggcgatgtaaccttc 557 |||||| | || |||| |||||||||||||| ||||||||||| || | ||| |||||| Sbjct: 103247 ataaaacccgcggcaataccagcagcagttgcatagaatgtaaaaggtgctgtcaccttc 103188 Query: 558 ccagtaacaactgtggagaatgacaaaattccagcagaaacaaacgtgcacaccaactgg 617 ||||||| |||||| || ||||||||||||||||| ||||||| ||| ||||||||||| Sbjct: 103187 ccagtaataactgtagaaaatgacaaaattccagcggaaacaactgtggacaccaactgg 103128 Query: 618 gaccagaaccctagggtacccaagttcttgaaa 650 ||||||||||| || |||||||| ||||||||| Sbjct: 103127 gaccagaacccaagagtacccaaattcttgaaa 103095 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 152 cacggaacggagcagctccagggaagttgccagccctaggaaatgcgacagtatggtgtt 211 |||||| || |||| ||||||||| | ||||| || |||||||||||||| ||| |||| Sbjct: 104730 cacggagcgcagcaactccagggagctcgccaggccaaggaaatgcgacaggatgatgtt 104671 Query: 212 cgctgaagcctg 223 |||||||||||| Sbjct: 104670 cgctgaagcctg 104659
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 220 bits (111), Expect = 4e-54 Identities = 183/207 (88%) Strand = Plus / Minus Query: 220 cctgaaccaggaatacatctagagccaaaacaggactttgaccagcggaagttgtctgat 279 ||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 6337 cctgaactaggaaaacatctagagccaaaacaggactttgaccaggggaagttgcttgat 6278 Query: 280 aataggggactgcagaggtagtaagggcttttgctaccaaagcaccaacaagtgcctgca 339 | || || ||||||||||||||||| || || ||||||||||| |||||| ||| |||| Sbjct: 6277 agtaaggtactgcagaggtagtaagagccttcgctaccaaagccccaacagttgcttgca 6218 Query: 340 taccgagaacagctgcgcccatcccaagaatattgagcacaatgccatttttcagacttt 399 | |||||||| || || |||||||| || |||||||||||||||||||||||||||||| Sbjct: 6217 tgccgagaactgcagcacccatcccgagcatattgagcacaatgccatttttcagacttc 6158 Query: 400 taatcacatcagcccgtggaggagcct 426 |||| |||||||| ||||||||||||| Sbjct: 6157 taattacatcagcacgtggaggagcct 6131 Score = 216 bits (109), Expect = 7e-53 Identities = 187/213 (87%) Strand = Plus / Minus Query: 438 cttgctgttttccgtagtctttcagacagacggatgtaaccaaatgaccagaagactgag 497 ||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 5887 cttgctgtttttctaagtctttcagaaaggcggatgtaaccaaatgaccagaagactgaa 5828 Query: 498 ataaaagctgcagcaacaccagcagcagttgtgtagaatgtaaagggcgatgtaaccttc 557 |||||| | || |||| |||||||||||||| ||||||||||| || | ||| |||||| Sbjct: 5827 ataaaacccgcggcaataccagcagcagttgcatagaatgtaaaaggtgctgtcaccttc 5768 Query: 558 ccagtaacaactgtggagaatgacaaaattccagcagaaacaaacgtgcacaccaactgg 617 ||||||| |||||| || ||||||||||||||||| ||||||| ||| ||||||||||| Sbjct: 5767 ccagtaataactgtagaaaatgacaaaattccagcggaaacaactgtggacaccaactgg 5708 Query: 618 gaccagaaccctagggtacccaagttcttgaaa 650 ||||||||||| || |||||||| ||||||||| Sbjct: 5707 gaccagaacccaagagtacccaaattcttgaaa 5675 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 152 cacggaacggagcagctccagggaagttgccagccctaggaaatgcgacagtatggtgtt 211 |||||| || |||| ||||||||| | ||||| || |||||||||||||| ||| |||| Sbjct: 7310 cacggagcgcagcaactccagggagctcgccaggccaaggaaatgcgacaggatgatgtt 7251 Query: 212 cgctgaagcctg 223 |||||||||||| Sbjct: 7250 cgctgaagcctg 7239
>dbj|AK073270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027A18, full insert sequence Length = 1207 Score = 159 bits (80), Expect = 1e-35 Identities = 353/444 (79%) Strand = Plus / Minus Query: 207 gtgttcgctgaagcctgaaccaggaatacatctagagccaaaacaggactttgaccagcg 266 ||||| |||||||||||||| ||||| ||||||| || | |||||| || || |||| Sbjct: 802 gtgttggctgaagcctgaacaaggaaaacatctaaagatagaacagggctctggccagga 743 Query: 267 gaagttgtctgataataggggactgcagaggtagtaagggcttttgctaccaaagcacca 326 || || ||| || || || |||||||| ||||| ||||||||||||||||| || || Sbjct: 742 gatattccctggtagtacggcactgcagatgtagtgagggcttttgctaccaatgcccct 683 Query: 327 acaagtgcctgcataccgagaacagctgcgcccatcccaagaatattgagcacaatgcca 386 ||| |||||||||||| |||| || || ||||| ||||||| |||||||||||| ||| Sbjct: 682 acagttgcctgcataccaagaattgcagcacccattccaagaacattgagcacaatacca 623 Query: 387 tttttcagacttttaatcacatcagcccgtggaggagcctttgcgggtgcgcttgctgtt 446 ||||| ||| |||| | |||||| || ||||||||||||||||| ||| | |||||||| Sbjct: 622 tttttgagattttttaccacatcggcacgtggaggagcctttgcaggtttgtttgctgtt 563 Query: 447 ttccgtagtctttcagacagacggatgtaaccaaatgaccagaagactgagataaaagct 506 || || |||| || |||||||| |||||||| | ||| |||||||| ||||| || Sbjct: 562 ctcttaagcctttgtgaaagacggatataaccaaaagcccaaaagactgaaataaatgcc 503 Query: 507 gcagcaacaccagcagcagttgtgtagaatgtaaagggcgatgtaaccttcccagtaaca 566 ||| ||| |||| | ||||| ||||||||||||| ||||| | ||||| ||| | Sbjct: 502 gcaacaataccaattgaagttgcaaagaatgtaaagggagatgttgcattccctgtagcg 443 Query: 567 actgtggagaatgacaaaattccagcagaaacaaacgtgcacaccaactgggaccagaac 626 |||| ||||||||||||||||| || || ||| |||||||| ||||| |||||||| Sbjct: 442 actgccgagaatgacaaaattcctgctgagacagttgtgcacactaactgagaccagaat 383 Query: 627 cctagggtacccaagttcttgaaa 650 || ||||| ||||| |||||||| Sbjct: 382 cccagggtgcccaaagtcttgaaa 359
>dbj|AK063888.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-G03, full insert sequence Length = 728 Score = 127 bits (64), Expect = 5e-26 Identities = 238/296 (80%) Strand = Plus / Minus Query: 207 gtgttcgctgaagcctgaaccaggaatacatctagagccaaaacaggactttgaccagcg 266 ||||| |||||||||||||| ||||| ||||||| || | |||||| || || |||| Sbjct: 321 gtgttggctgaagcctgaacaaggaaaacatctaaagatagaacagggctctggccagga 262 Query: 267 gaagttgtctgataataggggactgcagaggtagtaagggcttttgctaccaaagcacca 326 || || ||| || || || |||||||| ||||| ||||||||||||||||| || || Sbjct: 261 gatattccctggtagtacggcactgcagatgtagtgagggcttttgctaccaatgcccct 202 Query: 327 acaagtgcctgcataccgagaacagctgcgcccatcccaagaatattgagcacaatgcca 386 ||| |||||||||||| |||| || || ||||| ||||||| |||||||||||| ||| Sbjct: 201 acagttgcctgcataccaagaattgcagcacccattccaagaacattgagcacaatacca 142 Query: 387 tttttcagacttttaatcacatcagcccgtggaggagcctttgcgggtgcgcttgctgtt 446 ||||| ||| |||| | |||||| || ||||||||||||||||| ||| | |||||||| Sbjct: 141 tttttgagattttttaccacatcggcacgtggaggagcctttgcaggtttgtttgctgtt 82 Query: 447 ttccgtagtctttcagacagacggatgtaaccaaatgaccagaagactgagataaa 502 || || |||| || |||||||| |||||||| | ||| |||||||| ||||| Sbjct: 81 ctcttaagcctttgtgaaagacggatataaccaaaagcccaaaagactgaaataaa 26
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 109 bits (55), Expect = 1e-20 Identities = 118/139 (84%) Strand = Plus / Plus Query: 288 actgcagaggtagtaagggcttttgctaccaaagcaccaacaagtgcctgcataccgaga 347 |||||||| ||||| ||||||||||||||||| || || ||| |||||||||||| ||| Sbjct: 25545006 actgcagatgtagtgagggcttttgctaccaatgcccctacagttgcctgcataccaaga 25545065 Query: 348 acagctgcgcccatcccaagaatattgagcacaatgccatttttcagacttttaatcaca 407 | || || ||||| ||||||| |||||||||||| |||||||| ||| |||| | |||| Sbjct: 25545066 attgcagcacccattccaagaacattgagcacaataccatttttgagattttttaccaca 25545125 Query: 408 tcagcccgtggaggagcct 426 || || ||||||||||||| Sbjct: 25545126 tcggcacgtggaggagcct 25545144 Score = 67.9 bits (34), Expect = 4e-08 Identities = 148/186 (79%) Strand = Plus / Plus Query: 465 agacggatgtaaccaaatgaccagaagactgagataaaagctgcagcaacaccagcagca 524 |||||||| |||||||| | ||| |||||||| ||||| || ||| ||| |||| | | Sbjct: 25545534 agacggatataaccaaaagcccaaaagactgaaataaatgccgcaacaataccaattgaa 25545593 Query: 525 gttgtgtagaatgtaaagggcgatgtaaccttcccagtaacaactgtggagaatgacaaa 584 |||| ||||||||||||| ||||| | ||||| ||| | |||| |||||||||||| Sbjct: 25545594 gttgcaaagaatgtaaagggagatgttgcattccctgtagcgactgccgagaatgacaaa 25545653 Query: 585 attccagcagaaacaaacgtgcacaccaactgggaccagaaccctagggtacccaagttc 644 ||||| || || ||| |||||||| ||||| |||||||| || ||||| ||||| || Sbjct: 25545654 attcctgctgagacagttgtgcacactaactgagaccagaatcccagggtgcccaaagtc 25545713 Query: 645 ttgaaa 650 |||||| Sbjct: 25545714 ttgaaa 25545719 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 aatgacaaaattccagcaga 595 |||||||||||||||||||| Sbjct: 4377601 aatgacaaaattccagcaga 4377582
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 109 bits (55), Expect = 1e-20 Identities = 118/139 (84%) Strand = Plus / Plus Query: 288 actgcagaggtagtaagggcttttgctaccaaagcaccaacaagtgcctgcataccgaga 347 |||||||| ||||| ||||||||||||||||| || || ||| |||||||||||| ||| Sbjct: 63323 actgcagatgtagtgagggcttttgctaccaatgcccctacagttgcctgcataccaaga 63382 Query: 348 acagctgcgcccatcccaagaatattgagcacaatgccatttttcagacttttaatcaca 407 | || || ||||| ||||||| |||||||||||| |||||||| ||| |||| | |||| Sbjct: 63383 attgcagcacccattccaagaacattgagcacaataccatttttgagattttttaccaca 63442 Query: 408 tcagcccgtggaggagcct 426 || || ||||||||||||| Sbjct: 63443 tcggcacgtggaggagcct 63461 Score = 67.9 bits (34), Expect = 4e-08 Identities = 148/186 (79%) Strand = Plus / Plus Query: 465 agacggatgtaaccaaatgaccagaagactgagataaaagctgcagcaacaccagcagca 524 |||||||| |||||||| | ||| |||||||| ||||| || ||| ||| |||| | | Sbjct: 63851 agacggatataaccaaaagcccaaaagactgaaataaatgccgcaacaataccaattgaa 63910 Query: 525 gttgtgtagaatgtaaagggcgatgtaaccttcccagtaacaactgtggagaatgacaaa 584 |||| ||||||||||||| ||||| | ||||| ||| | |||| |||||||||||| Sbjct: 63911 gttgcaaagaatgtaaagggagatgttgcattccctgtagcgactgccgagaatgacaaa 63970 Query: 585 attccagcagaaacaaacgtgcacaccaactgggaccagaaccctagggtacccaagttc 644 ||||| || || ||| |||||||| ||||| |||||||| || ||||| ||||| || Sbjct: 63971 attcctgctgagacagttgtgcacactaactgagaccagaatcccagggtgcccaaagtc 64030 Query: 645 ttgaaa 650 |||||| Sbjct: 64031 ttgaaa 64036
>ref|XM_318376.2| Anopheles gambiae str. PEST ENSANGP00000002726 (ENSANGG00000002259), partial mRNA Length = 3549 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 503 agctgcagcaacaccagcagcag 525 ||||||||||||||||||||||| Sbjct: 3341 agctgcagcaacaccagcagcag 3363
>ref|XM_637869.1| Dictyostelium discoideum hypothetical protein (DDB0169026), partial mRNA Length = 2448 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 500 aaaagctgcagcaacaccagcagcag 525 |||||||||||||| ||||||||||| Sbjct: 813 aaaagctgcagcaataccagcagcag 788
>gb|AC091865.3| Homo sapiens chromosome 5 clone CTD-2354N18, complete sequence Length = 87256 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 cagtcaaaggaaaaaaggaaaa 83 |||||||||||||||||||||| Sbjct: 61538 cagtcaaaggaaaaaaggaaaa 61559
>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence Length = 254733 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 500 aaaagctgcagcaacaccagcagcag 525 |||||||||||||| ||||||||||| Sbjct: 227712 aaaagctgcagcaataccagcagcag 227737
>gb|AC026722.4|AC026722 Homo sapiens chromosome 5 clone CTD-2203N22, complete sequence Length = 150162 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 cagtcaaaggaaaaaaggaaaa 83 |||||||||||||||||||||| Sbjct: 101100 cagtcaaaggaaaaaaggaaaa 101121
>ref|XM_817746.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.0940) partial mRNA Length = 1380 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 cagcaacaccagcagcagttg 528 ||||||||||||||||||||| Sbjct: 103 cagcaacaccagcagcagttg 123
>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179892 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 agctgcagcaacaccagcagcagtt 527 |||||||||| |||||||||||||| Sbjct: 62979 agctgcagcagcaccagcagcagtt 63003
>ref|NM_132538.1| Drosophila melanogaster CG15737-RA (CG15737), mRNA Length = 5119 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 agctgcagcaacaccagcagcagtt 527 |||||||||| |||||||||||||| Sbjct: 4514 agctgcagcagcaccagcagcagtt 4538
>gb|AC073283.8| Homo sapiens BAC clone RP11-761B3 from 2, complete sequence Length = 181720 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 501 aaagctgcagcaacaccagcagcag 525 ||||| ||||||||||||||||||| Sbjct: 130362 aaagcagcagcaacaccagcagcag 130338
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 agctgcagcaacaccagcagcagtt 527 |||||||||| |||||||||||||| Sbjct: 190420 agctgcagcagcaccagcagcagtt 190444
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 gcagcaacaccagcagcagt 526 |||||||||||||||||||| Sbjct: 1058088 gcagcaacaccagcagcagt 1058069
>gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosome 10, complete sequence Length = 195132 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 aaattccagcagaaacaaac 602 |||||||||||||||||||| Sbjct: 192142 aaattccagcagaaacaaac 192123
>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence Length = 162020 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 619 accagaaccctagggtacccaagt 642 ||||||||||| |||||||||||| Sbjct: 66902 accagaaccctggggtacccaagt 66879
>emb|CR728634.1|CNS0GP5S Tetraodon nigroviridis full-length cDNA Length = 1562 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gtcaaaggaaaaaaggaaaa 83 |||||||||||||||||||| Sbjct: 1483 gtcaaaggaaaaaaggaaaa 1464
>gb|AC092031.4| Homo sapiens BAC clone RP11-660M7 from 7, complete sequence Length = 99374 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 566 aactgtggagaatgacaaaattcc 589 ||||||| |||||||||||||||| Sbjct: 39984 aactgtgtagaatgacaaaattcc 40007
>gb|AC183690.3| Cavia porcellus clone CH234-212D11, complete sequence Length = 108490 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 aatgacaaaattccagcaga 595 |||||||||||||||||||| Sbjct: 57196 aatgacaaaattccagcaga 57177
>gb|AC175208.3| Cavia porcellus clone CH234-14J14, complete sequence Length = 140345 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 aatgacaaaattccagcaga 595 |||||||||||||||||||| Sbjct: 9103 aatgacaaaattccagcaga 9084
>emb|AL162582.30| Human DNA sequence from clone RP1-276N6 on chromosome 6 Contains the 5' end of the SLC22A2 gene for solute carrier family 22 (organic cation transporter), member 2 (OCT2) and a novel gene, complete sequence Length = 85786 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 gcagcaacaccagcagcagt 526 |||||||||||||||||||| Sbjct: 24494 gcagcaacaccagcagcagt 24513
>emb|AL162407.14| Human DNA sequence from clone RP11-393E20 on chromosome 10 Contains the 3' end of the gene for a novel NHL repeat domain containing protein (FLJ33312 FLJ25621 DKFZp313F0131 FLJ30653 FLJ36994 FLJ20147), complete sequence Length = 114145 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 atgacaaaattccagcagaa 596 |||||||||||||||||||| Sbjct: 47341 atgacaaaattccagcagaa 47360
>emb|AL035702.7|HS593C16 Human DNA sequence from clone RP4-593C16 on chromosome 1q24.1-25.2 Contains the 3' end of the RASAL2 gene for RAS protein activator like 2, the 3' end of a novel gene and a CpG island, complete sequence Length = 81971 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gaaccaggaatacatctaga 242 |||||||||||||||||||| Sbjct: 41373 gaaccaggaatacatctaga 41354
>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0099J16, complete sequence Length = 133198 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 ttgctgttttccgtagtctt 458 |||||||||||||||||||| Sbjct: 66021 ttgctgttttccgtagtctt 66040
>gb|AY129337.1| Mycobacteriophage Bxz1, complete genome Length = 156102 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 gcctttgcgggtgcgcttgc 442 |||||||||||||||||||| Sbjct: 39845 gcctttgcgggtgcgcttgc 39826
>emb|CR858242.1| Pongo pygmaeus mRNA; cDNA DKFZp469B244 (from clone DKFZp469B244) Length = 5660 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 aaaagctgcagcaacaccagcagc 523 ||||||||||||||| |||||||| Sbjct: 835 aaaagctgcagcaactccagcagc 812
>emb|CR857095.1| Pongo pygmaeus mRNA; cDNA DKFZp469L0417 (from clone DKFZp469L0417) Length = 5485 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 aaaagctgcagcaacaccagcagc 523 ||||||||||||||| |||||||| Sbjct: 861 aaaagctgcagcaactccagcagc 838
>gb|AC023503.23| Homo sapiens 3 BAC RP11-217I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160370 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 aaaattccagcagaaacaaa 601 |||||||||||||||||||| Sbjct: 50651 aaaattccagcagaaacaaa 50632
>dbj|AK220319.1| Mus musculus premature mRNA for mKIAA0046 protein Length = 3289 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 aaaagctgcagcaacaccagcagc 523 ||||||||||||||| |||||||| Sbjct: 419 aaaagctgcagcaacgccagcagc 396
>gb|AC104606.6| Drosophila melanogaster X BAC RP98-26L11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183105 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 502 aagctgcagcaacaccagcagcag 525 |||| ||||||||||||||||||| Sbjct: 91463 aagcagcagcaacaccagcagcag 91486
>gb|AF280768.1| Vitis vinifera dihydroflavonol reductase gene, partial cds Length = 2659 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aaaggaaaaaaggaaaacga 86 |||||||||||||||||||| Sbjct: 793 aaaggaaaaaaggaaaacga 812
>gb|AC105314.5| Homo sapiens BAC clone RP11-312H15 from 4, complete sequence Length = 193665 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 ccttcccagtaacaactgtg 572 |||||||||||||||||||| Sbjct: 136390 ccttcccagtaacaactgtg 136371
>gb|AY095064.1| Drosophila melanogaster RE06823 full insert cDNA Length = 1862 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 502 aagctgcagcaacaccagcagcag 525 |||| ||||||||||||||||||| Sbjct: 685 aagcagcagcaacaccagcagcag 708
>ref|NM_132172.2| Drosophila melanogaster CG15478-RA (CG15478), mRNA Length = 1845 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 502 aagctgcagcaacaccagcagcag 525 |||| ||||||||||||||||||| Sbjct: 684 aagcagcagcaacaccagcagcag 707
>dbj|AK145053.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830032D15 product:chloride channel 6, full insert sequence Length = 3123 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 aaaagctgcagcaacaccagcagc 523 ||||||||||||||| |||||||| Sbjct: 807 aaaagctgcagcaacgccagcagc 784
>dbj|AK165362.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430113C14 product:chloride channel 6, full insert sequence Length = 3311 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 aaaagctgcagcaacaccagcagc 523 ||||||||||||||| |||||||| Sbjct: 810 aaaagctgcagcaacgccagcagc 787
>gb|AC026356.29| Homo sapiens 12 BAC RP11-817I4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 37490 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tcaaaggaaaaaaggaaaac 84 |||||||||||||||||||| Sbjct: 32516 tcaaaggaaaaaaggaaaac 32497
>gb|AY052081.1| Drosophila melanogaster SD03340 full length cDNA Length = 1933 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 502 aagctgcagcaacaccagcagcag 525 |||| ||||||||||||||||||| Sbjct: 750 aagcagcagcaacaccagcagcag 773
>gb|U90878.1|HSU90878 Homo sapiens carboxyl terminal LIM domain protein (CLIM1) mRNA, complete cds Length = 1496 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 485 ccagaagactgagataaaagctgcagca 512 |||||| ||||||| ||||||||||||| Sbjct: 1196 ccagaacactgagagaaaagctgcagca 1169
>dbj|AK045787.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230311B16 product:chloride channel 6, full insert sequence Length = 2335 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 aaaagctgcagcaacaccagcagc 523 ||||||||||||||| |||||||| Sbjct: 349 aaaagctgcagcaacgccagcagc 326
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 ttgctgttttccgtagtctt 458 |||||||||||||||||||| Sbjct: 25938945 ttgctgttttccgtagtctt 25938926
>ref|XM_227870.3| PREDICTED: Rattus norvegicus chloride channel 6 (predicted) (Clcn6_predicted), mRNA Length = 2908 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 aaaagctgcagcaacaccagcagc 523 ||||||||||||||| |||||||| Sbjct: 762 aaaagctgcagcaactccagcagc 739
>gb|AC146065.4| Pan troglodytes BAC clone clone RP43-60D22 from 7, complete sequence Length = 172757 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 566 aactgtggagaatgacaaaattcc 589 ||||||| |||||||||||||||| Sbjct: 67885 aactgtgtagaatgacaaaattcc 67862
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 aatgacaaaattccagcaga 595 |||||||||||||||||||| Sbjct: 25282 aatgacaaaattccagcaga 25263
>gb|AC005870.2|AC005870 b89h3, complete sequence Length = 78816 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 atgacaaaattccagcagaa 596 |||||||||||||||||||| Sbjct: 36291 atgacaaaattccagcagaa 36310
>gb|AC005886.2|AC005886 b240g16, complete sequence Length = 134011 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 atgacaaaattccagcagaa 596 |||||||||||||||||||| Sbjct: 128677 atgacaaaattccagcagaa 128658
>gb|AC153620.4| Mus musculus 6 BAC RP23-326P16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194383 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 aaccaaatgaccagaagact 494 |||||||||||||||||||| Sbjct: 124817 aaccaaatgaccagaagact 124798
>gb|AF030104.1|MMCLCNVI4 Mus musculus putative chloride channel protein CLC6 (Clc6), exons 5-18 Length = 14925 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 aaaagctgcagcaacaccagcagc 523 ||||||||||||||| |||||||| Sbjct: 8382 aaaagctgcagcaacgccagcagc 8359
>gb|AE003441.3| Drosophila melanogaster chromosome X, section 25 of 74 of the complete sequence Length = 285949 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 aagctgcagcaacaccagcagcag 525 |||| ||||||||||||||||||| Sbjct: 200385 aagcagcagcaacaccagcagcag 200362
>gb|AC004067.1|AC004067 Homo sapiens chromosome 4 clone B366O24 map 4q25, complete sequence Length = 161326 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 ccttcccagtaacaactgtg 572 |||||||||||||||||||| Sbjct: 36659 ccttcccagtaacaactgtg 36640
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 ttgctgttttccgtagtctt 458 |||||||||||||||||||| Sbjct: 26257643 ttgctgttttccgtagtctt 26257624
>ref|NM_011929.1| Mus musculus chloride channel 6 (Clcn6), mRNA Length = 2910 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 aaaagctgcagcaacaccagcagc 523 ||||||||||||||| |||||||| Sbjct: 762 aaaagctgcagcaacgccagcagc 739
>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence Length = 207157 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 aaattccagcagaaacaaac 602 |||||||||||||||||||| Sbjct: 116299 aaattccagcagaaacaaac 116318
>emb|AL606929.13| Mouse DNA sequence from clone RP23-139J21 on chromosome 4, complete sequence Length = 198728 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 aaaagctgcagcaacaccagcagc 523 ||||||||||||||| |||||||| Sbjct: 18840 aaaagctgcagcaacgccagcagc 18863
>emb|AL807765.6| Mouse DNA sequence from clone RP23-478J19 on chromosome X, complete sequence Length = 48105 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 aaagctgcagcaacaccagc 520 |||||||||||||||||||| Sbjct: 33891 aaagctgcagcaacaccagc 33910 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,791,494 Number of Sequences: 3902068 Number of extensions: 5791494 Number of successful extensions: 119120 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118842 Number of HSP's gapped (non-prelim): 276 length of query: 650 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 627 effective length of database: 17,143,297,704 effective search space: 10748847660408 effective search space used: 10748847660408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)