ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19m16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, co... 56 1e-04
2gb|AC154715.2| Mus musculus BAC clone RP24-361A22 from chromosom... 46 0.098
3gb|AY103562.1| Zea mays PCO085487 mRNA sequence 46 0.098
4gb|AY104323.1| Zea mays PCO085485 mRNA sequence 46 0.098
5ref|NM_184202.2| Oryza sativa (japonica cultivar-group), mRNA 44 0.39
6gb|AY190955.1| Drosophila virilis clone DVIF01_37_D05 (D1427) ge... 44 0.39
7emb|AL035454.18|HS1002M8 Human DNA sequence from clone RP5-1002M... 44 0.39
8gb|AC155294.2| Mus musculus BAC clone RP24-328F24 from chromosom... 44 0.39
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
10dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
11dbj|AK105455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
12dbj|AK102138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
13gb|AC113246.15| Mus musculus chromosome 6, clone RP23-315E20, co... 42 1.5
14emb|CT025605.11| Mouse DNA sequence from clone RP23-259D11 on ch... 42 1.5
15gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome... 42 1.5
16emb|CR759875.6| Zebrafish DNA sequence from clone DKEY-274K22 in... 42 1.5
17emb|CR405706.7| Zebrafish DNA sequence from clone CH211-233D12 i... 42 1.5
18emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 42 1.5
19ref|NM_009900.1| Mus musculus chloride channel 2 (Clcn2), mRNA 42 1.5
20gb|AC159505.7| Mus musculus 6 BAC RP23-81D20 (Roswell Park Cance... 42 1.5
21dbj|AK141656.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 42 1.5
22dbj|AK171231.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 1.5
23dbj|AK155104.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 1.5
24dbj|AK165000.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 42 1.5
25dbj|AK172148.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 1.5
26gb|AC022405.5|AC022405 Homo sapiens chromosome 15 clone CTD-2339... 42 1.5
27gb|AF097415.1|AF097415 Mus musculus chloride channel CLC-2 (Clcn... 42 1.5
28gb|AF139724.1|AF139724 Mus musculus voltage-regulated and volume... 42 1.5
29emb|CT010490.10| Mouse DNA sequence from clone RP23-148P12 on ch... 42 1.5
30gb|AC123821.4| Mus musculus BAC clone RP23-466F9 from chromosome... 42 1.5
31emb|AL844547.9| Mouse DNA sequence from clone RP23-216B20 on chr... 42 1.5
32ref|XM_549980.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
33gb|AC087861.2| Felis catus clone RP86-49M22, complete sequence 40 6.0
34gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosom... 40 6.0
35gb|BC043995.1| Xenopus laevis ACTN1 protein, mRNA (cDNA clone MG... 40 6.0
36gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome... 40 6.0
37gb|AC125075.4| Mus musculus BAC clone RP23-468P13 from chromosom... 40 6.0
38gb|AC124534.4| Mus musculus BAC clone RP23-316G7 from chromosome... 40 6.0
39gb|AC121857.2| Mus musculus BAC clone RP24-98A9 from 1, complete... 40 6.0
40emb|CR936410.12| Zebrafish DNA sequence from clone CH73-45K13 in... 40 6.0
41emb|CR626942.6| Zebrafish DNA sequence from clone DKEY-189F18 in... 40 6.0
42emb|Z99290.1|HS299C21 Human DNA sequence from clone RP1-299C21 o... 40 6.0
43emb|AL590100.6| Human DNA sequence from clone RP11-49O3 on chrom... 40 6.0
44ref|NM_009289.1| Mus musculus STE20-like kinase (yeast) (Slk), mRNA 40 6.0
45emb|AL162498.12| Human DNA sequence from clone RP11-315A9 on chr... 40 6.0
46emb|AL031430.2|HS406M12 Human DNA sequence from clone RP3-406M12... 40 6.0
47emb|CR352267.11| Zebrafish DNA sequence from clone DKEY-174N5 in... 40 6.0
48emb|Z48179.1|SC9302X S.cerevisiae chromosome IV cosmid 9302 40 6.0
49emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.0
50emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chrom... 40 6.0
51emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowm... 40 6.0
52emb|AL663065.9| Mouse DNA sequence from clone RP23-248G11 on chr... 40 6.0
53emb|AL929089.5| Mouse DNA sequence from clone RP24-402O2 on chro... 40 6.0
54emb|AL627326.16| Mouse DNA sequence from clone RP23-20A22 on chr... 40 6.0
55emb|BX547935.12| Zebrafish DNA sequence from clone CH211-207C1 i... 40 6.0
56gb|AC011492.8| Homo sapiens chromosome 19 clone CTB-187L3, compl... 40 6.0
57gb|DP000060.1| Atelerix albiventris target 117 genomic scaffold 40 6.0
58gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, comp... 40 6.0
59emb|BX537264.9| Zebrafish DNA sequence from clone CH211-1C4 in l... 40 6.0
60dbj|AK029491.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.0
61gb|AC153649.4| Mus musculus BAC clone RP24-93B8 from chromosome ... 40 6.0
62gb|AC157995.2| Mus musculus BAC clone RP24-364K9 from chromosome... 40 6.0
63emb|BX248233.7| Zebrafish DNA sequence from clone CH211-125N11 i... 40 6.0
64gb|AC131772.4| Mus musculus BAC clone RP24-300K9 from chromosome... 40 6.0
65gb|AC087738.13| Homo sapiens chromosome 15, clone RP11-365F16, c... 40 6.0
66gb|AF112855.1|AF112855 Mus musculus Ste20-related kinase SMAK (S... 40 6.0
67dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.0
68dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
69emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, co... 40 6.0
70emb|CR394522.8| Zebrafish DNA sequence from clone DKEY-159D6 in ... 40 6.0
71dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA f... 40 6.0
72dbj|AK122218.1| Mus musculus mRNA for mKIAA0204 protein 40 6.0
73gb|AC007450.1| Homo sapiens 12 BAC RP11-434C1 (Roswell Park Canc... 40 6.0
74emb|AL954843.8| Zebrafish DNA sequence from clone DKEY-149K8 in ... 40 6.0
75emb|AL935326.13| Mouse DNA sequence from clone RP23-10L17 on chr... 40 6.0
76gb|AF039574.1|AF039574 Mus musculus serine/threonine protein kin... 40 6.0
77gb|AC118593.6| Mus musculus chromosome 19, clone RP24-464I2, com... 40 6.0
78emb|CR392001.6| Zebrafish DNA sequence from clone DKEY-70B24 in ... 40 6.0
79gb|AC005587.1| Homo sapiens PAC clone RP5-988G15 from 6, complet... 40 6.0
80dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0 
>gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, complete sequence; putative Bowman
            Birk trypsin inhibitor gene, complete cds; Stowaway MITE,
            complete sequence; and insertion sequences xl_tt1a and
            xl_tt1b putative ripening related protein genes, complete
            cds
          Length = 26073

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 323  ggcagctcttgcaggtcggagcacactgctcgacctcgtc 362
            ||||| ||||||||||||| || |||||||||||||||||
Sbjct: 8897 ggcaggtcttgcaggtcggggcgcactgctcgacctcgtc 8858
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>gb|AC154715.2| Mus musculus BAC clone RP24-361A22 from chromosome 16, complete
             sequence
          Length = 172362

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 54    tgagcttccatttttattttattgttt 80
             ||||||| |||||||||||||||||||
Sbjct: 82094 tgagcttgcatttttattttattgttt 82120
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>gb|AY103562.1| Zea mays PCO085487 mRNA sequence
          Length = 2258

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 408  gtcgcagcatttccacggcctct 430
            |||||||||||||||||||||||
Sbjct: 2199 gtcgcagcatttccacggcctct 2177
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>gb|AY104323.1| Zea mays PCO085485 mRNA sequence
          Length = 1303

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 408 gtcgcagcatttccacggcctct 430
           |||||||||||||||||||||||
Sbjct: 579 gtcgcagcatttccacggcctct 557
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>ref|NM_184202.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 876

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 408 gtcgcagcatttccacggcctc 429
           ||||||||||||||||||||||
Sbjct: 405 gtcgcagcatttccacggcctc 384
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>gb|AY190955.1| Drosophila virilis clone DVIF01_37_D05 (D1427) genomic sequence
          Length = 43945

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 67    ttattttattgtttacatgcacacac 92
             |||||||||||||||| |||||||||
Sbjct: 19783 ttattttattgtttacctgcacacac 19808
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>emb|AL035454.18|HS1002M8 Human DNA sequence from clone RP5-1002M8 on chromosome 20p11.21-11.23
             Contains the 3' end of the NAT5 gene for
             N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae), the
             CRNKL1 gene for crooked neck-like 1 (Drosophila) (Crn),
             the 5' end of the C20orf26 gene for chromosome 20 open
             reading frame 26 (C20orf26) and a CpG island, complete
             sequence
          Length = 111768

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 54    tgagcttccatttttattttattgtt 79
             |||| |||||||||||||||||||||
Sbjct: 50578 tgagattccatttttattttattgtt 50603
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>gb|AC155294.2| Mus musculus BAC clone RP24-328F24 from chromosome 13, complete
             sequence
          Length = 174186

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 71    tttattgtttacatgcacacac 92
             ||||||||||||||||||||||
Sbjct: 72825 tttattgtttacatgcacacac 72846
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 408     gtcgcagcatttccacggcctc 429
               ||||||||||||||||||||||
Sbjct: 1515243 gtcgcagcatttccacggcctc 1515222



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 408     gtcgcagcatttccacggcctctc 431
               ||||||||| ||||||||||||||
Sbjct: 1353366 gtcgcagcacttccacggcctctc 1353389
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>dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0409B08
          Length = 134673

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 408   gtcgcagcatttccacggcctc 429
             ||||||||||||||||||||||
Sbjct: 80891 gtcgcagcatttccacggcctc 80870
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>dbj|AK105455.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-D07, full
           insert sequence
          Length = 876

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 408 gtcgcagcatttccacggcctc 429
           ||||||||||||||||||||||
Sbjct: 405 gtcgcagcatttccacggcctc 384
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>dbj|AK102138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085I16, full
           insert sequence
          Length = 879

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 408 gtcgcagcatttccacggcctc 429
           ||||||||||||||||||||||
Sbjct: 408 gtcgcagcatttccacggcctc 387
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>gb|AC113246.15| Mus musculus chromosome 6, clone RP23-315E20, complete sequence
          Length = 193776

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 62    catttttattttattgtttac 82
             |||||||||||||||||||||
Sbjct: 68302 catttttattttattgtttac 68282
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>emb|CT025605.11| Mouse DNA sequence from clone RP23-259D11 on chromosome 13, complete
             sequence
          Length = 188616

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 78    tttacatgcacacactgcagg 98
             |||||||||||||||||||||
Sbjct: 56045 tttacatgcacacactgcagg 56025
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>gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome 13, complete sequence
          Length = 211181

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 78    tttacatgcacacactgcagg 98
             |||||||||||||||||||||
Sbjct: 12152 tttacatgcacacactgcagg 12132
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>emb|CR759875.6| Zebrafish DNA sequence from clone DKEY-274K22 in linkage group 1,
             complete sequence
          Length = 216255

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    catttttattttattgtttac 82
             |||||||||||||||||||||
Sbjct: 34918 catttttattttattgtttac 34938
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>emb|CR405706.7| Zebrafish DNA sequence from clone CH211-233D12 in linkage group 1,
              complete sequence
          Length = 181249

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 62     catttttattttattgtttac 82
              |||||||||||||||||||||
Sbjct: 125642 catttttattttattgtttac 125662
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>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     ccatttttattttattgttta 81
              |||||||||||||||||||||
Sbjct: 935230 ccatttttattttattgttta 935210
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>ref|NM_009900.1| Mus musculus chloride channel 2 (Clcn2), mRNA
          Length = 3148

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 319  ggctggcagctcttgcaggtc 339
            |||||||||||||||||||||
Sbjct: 1112 ggctggcagctcttgcaggtc 1092
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>gb|AC159505.7| Mus musculus 6 BAC RP23-81D20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 254457

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     catttttattttattgtttac 82
              |||||||||||||||||||||
Sbjct: 235832 catttttattttattgtttac 235812
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>dbj|AK141656.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030011H03 product:chloride
            channel 2, full insert sequence
          Length = 3945

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 319  ggctggcagctcttgcaggtc 339
            |||||||||||||||||||||
Sbjct: 2270 ggctggcagctcttgcaggtc 2250
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>dbj|AK171231.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630312D12
           product:chloride channel 2, full insert sequence
          Length = 2934

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 319 ggctggcagctcttgcaggtc 339
           |||||||||||||||||||||
Sbjct: 928 ggctggcagctcttgcaggtc 908
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>dbj|AK155104.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630201N06
           product:chloride channel 2, full insert sequence
          Length = 2934

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 319 ggctggcagctcttgcaggtc 339
           |||||||||||||||||||||
Sbjct: 928 ggctggcagctcttgcaggtc 908
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>dbj|AK165000.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130114N01 product:chloride channel 2,
            full insert sequence
          Length = 3513

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 319  ggctggcagctcttgcaggtc 339
            |||||||||||||||||||||
Sbjct: 1162 ggctggcagctcttgcaggtc 1142
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>dbj|AK172148.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830048E20 product:chloride channel 2,
            full insert sequence
          Length = 3757

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 319  ggctggcagctcttgcaggtc 339
            |||||||||||||||||||||
Sbjct: 1617 ggctggcagctcttgcaggtc 1597
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>gb|AC022405.5|AC022405 Homo sapiens chromosome 15 clone CTD-2339L15 map 15q14, complete
             sequence
          Length = 111035

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 59    ttccatttttattttattgtttaca 83
             |||||||||||||||||| ||||||
Sbjct: 62296 ttccatttttattttattctttaca 62272
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>gb|AF097415.1|AF097415 Mus musculus chloride channel CLC-2 (Clcn2) mRNA, complete cds
          Length = 3148

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 319  ggctggcagctcttgcaggtc 339
            |||||||||||||||||||||
Sbjct: 1112 ggctggcagctcttgcaggtc 1092
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>gb|AF139724.1|AF139724 Mus musculus voltage-regulated and volume-regulated chloride channel
            ClC-2 mRNA, complete cds
          Length = 3107

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 319  ggctggcagctcttgcaggtc 339
            |||||||||||||||||||||
Sbjct: 1063 ggctggcagctcttgcaggtc 1043
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>emb|CT010490.10| Mouse DNA sequence from clone RP23-148P12 on chromosome 16, complete
             sequence
          Length = 206348

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 319   ggctggcagctcttgcaggtc 339
             |||||||||||||||||||||
Sbjct: 57146 ggctggcagctcttgcaggtc 57166
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>gb|AC123821.4| Mus musculus BAC clone RP23-466F9 from chromosome 7, complete sequence
          Length = 174785

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    ttttattttattgtttacatg 85
             |||||||||||||||||||||
Sbjct: 95549 ttttattttattgtttacatg 95529
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>emb|AL844547.9| Mouse DNA sequence from clone RP23-216B20 on chromosome 2, complete
              sequence
          Length = 210589

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 72     ttattgtttacatgcacacac 92
              |||||||||||||||||||||
Sbjct: 171138 ttattgtttacatgcacacac 171118
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>ref|XM_549980.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 411

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 408 gtcgcagcatttccacggcctctc 431
           ||||||||| ||||||||||||||
Sbjct: 27  gtcgcagcacttccacggcctctc 4
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>gb|AC087861.2| Felis catus clone RP86-49M22, complete sequence
          Length = 107365

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ttttattttattgtttacat 84
             ||||||||||||||||||||
Sbjct: 95760 ttttattttattgtttacat 95741
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>gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosome 19, complete
            sequence
          Length = 216902

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   cacacactgcaggctgctgc 105
            ||||||||||||||||||||
Sbjct: 2622 cacacactgcaggctgctgc 2603
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>gb|BC043995.1| Xenopus laevis ACTN1 protein, mRNA (cDNA clone MGC:53955
           IMAGE:5570582), complete cds
          Length = 3658

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ctgcaggctgctgcagcgac 111
           ||||||||||||||||||||
Sbjct: 25  ctgcaggctgctgcagcgac 44
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>gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome 19, complete sequence
          Length = 222814

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     acatgcacacactgcaggct 100
              ||||||||||||||||||||
Sbjct: 168624 acatgcacacactgcaggct 168605



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     acatgcacacactgcaggct 100
              ||||||||||||||||||||
Sbjct: 168546 acatgcacacactgcaggct 168527
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>gb|AC125075.4| Mus musculus BAC clone RP23-468P13 from chromosome 19, complete sequence
          Length = 188709

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     cacacactgcaggctgctgc 105
              ||||||||||||||||||||
Sbjct: 151285 cacacactgcaggctgctgc 151266
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>gb|AC124534.4| Mus musculus BAC clone RP23-316G7 from chromosome 1, complete sequence
          Length = 177675

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    cttccatttttattttattg 77
             ||||||||||||||||||||
Sbjct: 91699 cttccatttttattttattg 91680
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>gb|AC121857.2| Mus musculus BAC clone RP24-98A9 from 1, complete sequence
          Length = 171124

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    gcctctcttcgtctcccccc 444
              ||||||||||||||||||||
Sbjct: 122749 gcctctcttcgtctcccccc 122768
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>emb|CR936410.12| Zebrafish DNA sequence from clone CH73-45K13 in linkage group 6,
             complete sequence
          Length = 123203

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    catttttattttattgttta 81
             ||||||||||||||||||||
Sbjct: 20941 catttttattttattgttta 20922
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>emb|CR626942.6| Zebrafish DNA sequence from clone DKEY-189F18 in linkage group 17,
            complete sequence
          Length = 113259

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   ccatttttattttattgttt 80
            ||||||||||||||||||||
Sbjct: 6844 ccatttttattttattgttt 6863
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>emb|Z99290.1|HS299C21 Human DNA sequence from clone RP1-299C21 on chromosome 6q16, complete
             sequence
          Length = 77183

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    tttattgtttacatgcacac 90
             ||||||||||||||||||||
Sbjct: 15833 tttattgtttacatgcacac 15814
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>emb|AL590100.6| Human DNA sequence from clone RP11-49O3 on chromosome 13 Contains a
            CpG island, complete sequence
          Length = 43138

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 64   tttttattttattgtttaca 83
            ||||||||||||||||||||
Sbjct: 5807 tttttattttattgtttaca 5826
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>ref|NM_009289.1| Mus musculus STE20-like kinase (yeast) (Slk), mRNA
          Length = 4279

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   cacacactgcaggctgctgc 105
            ||||||||||||||||||||
Sbjct: 2023 cacacactgcaggctgctgc 2004
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>emb|AL162498.12| Human DNA sequence from clone RP11-315A9 on chromosome 13 Contains a
            CpG island, complete sequence
          Length = 24565

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   atttttattttattgtttac 82
            ||||||||||||||||||||
Sbjct: 5510 atttttattttattgtttac 5491
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>emb|AL031430.2|HS406M12 Human DNA sequence from clone RP3-406M12 on chromosome 1p34.1-34.3
             Contains a CpG island, complete sequence
          Length = 159281

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    cttccatttttattttattg 77
             ||||||||||||||||||||
Sbjct: 56246 cttccatttttattttattg 56227
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>emb|CR352267.11| Zebrafish DNA sequence from clone DKEY-174N5 in linkage group 21,
             complete sequence
          Length = 143937

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ttttattttattgtttacat 84
             ||||||||||||||||||||
Sbjct: 48759 ttttattttattgtttacat 48740
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>emb|Z48179.1|SC9302X S.cerevisiae chromosome IV cosmid 9302
          Length = 37552

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    gcttccatttttattttatt 76
             ||||||||||||||||||||
Sbjct: 35613 gcttccatttttattttatt 35632
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>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   gcacactgctcgacctcgtc 362
             ||||||||||||||||||||
Sbjct: 92006 gcacactgctcgacctcgtc 91987
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>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4
          Length = 313050

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     ttttattttattgtttacat 84
              ||||||||||||||||||||
Sbjct: 195502 ttttattttattgtttacat 195521
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>emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowman Birk trypsin inhibitor
          Length = 4624

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 408  gtcgcagcatttccacggcctctc 431
            ||||||||| ||||||||||||||
Sbjct: 3063 gtcgcagcacttccacggcctctc 3040
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>emb|AL663065.9| Mouse DNA sequence from clone RP23-248G11 on chromosome 11 Contains a
             heterogeneous nuclear ribonucleoprotein pseudogene and a
             CpG island, complete sequence
          Length = 210386

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    tgagcttccatttttatttt 73
             ||||||||||||||||||||
Sbjct: 17642 tgagcttccatttttatttt 17661
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>emb|AL929089.5| Mouse DNA sequence from clone RP24-402O2 on chromosome 11 Contains a
             novel gene (1700106J16Rik), complete sequence
          Length = 71354

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    atttttattttattgtttac 82
             ||||||||||||||||||||
Sbjct: 50020 atttttattttattgtttac 50039
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>emb|AL627326.16| Mouse DNA sequence from clone RP23-20A22 on chromosome 13 Contains the
              Plfr gene for proliferin related protein, the gene for
              novel protein 1600017N11Rik similar to prolactin, the Prlpm
              gene for prolactin-like protein M and the gene for a novel
              protein similar to proliferin, complete sequence
          Length = 184504

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     atttttattttattgtttac 82
              ||||||||||||||||||||
Sbjct: 110243 atttttattttattgtttac 110262
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>emb|BX547935.12| Zebrafish DNA sequence from clone CH211-207C1 in linkage group 16,
              complete sequence
          Length = 195252

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 64     tttttattttattgtttacatgca 87
              ||||| ||||||||||||||||||
Sbjct: 110408 ttttttttttattgtttacatgca 110431
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>gb|AC011492.8| Homo sapiens chromosome 19 clone CTB-187L3, complete sequence
          Length = 153064

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    gcttccatttttattttatt 76
             ||||||||||||||||||||
Sbjct: 70090 gcttccatttttattttatt 70071
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>gb|DP000060.1| Atelerix albiventris target 117 genomic scaffold
          Length = 527158

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     ccatttttattttattgttt 80
              ||||||||||||||||||||
Sbjct: 504065 ccatttttattttattgttt 504084
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>gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, complete sequence
          Length = 166114

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   catttccacggcctctcttc 434
             ||||||||||||||||||||
Sbjct: 88381 catttccacggcctctcttc 88362
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>emb|BX537264.9| Zebrafish DNA sequence from clone CH211-1C4 in linkage group 5, complete
              sequence
          Length = 160220

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     atttttattttattgtttac 82
              ||||||||||||||||||||
Sbjct: 108476 atttttattttattgtttac 108495
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>dbj|AK029491.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4921503G23 product:serine/threonine kinase
            2, full insert sequence
          Length = 2396

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   cacacactgcaggctgctgc 105
            ||||||||||||||||||||
Sbjct: 1885 cacacactgcaggctgctgc 1866
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>gb|AC153649.4| Mus musculus BAC clone RP24-93B8 from chromosome 1, complete sequence
          Length = 162838

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    gcctctcttcgtctcccccc 444
              ||||||||||||||||||||
Sbjct: 152173 gcctctcttcgtctcccccc 152192
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>gb|AC157995.2| Mus musculus BAC clone RP24-364K9 from chromosome 9, complete sequence
          Length = 181542

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    atttttattttattgtttac 82
             ||||||||||||||||||||
Sbjct: 51863 atttttattttattgtttac 51882
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>emb|BX248233.7| Zebrafish DNA sequence from clone CH211-125N11 in linkage group 10,
              complete sequence
          Length = 157428

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     ttttattttattgtttacat 84
              ||||||||||||||||||||
Sbjct: 107658 ttttattttattgtttacat 107639
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>gb|AC131772.4| Mus musculus BAC clone RP24-300K9 from chromosome 5, complete sequence
          Length = 161015

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    ttccatttttattttattgt 78
             ||||||||||||||||||||
Sbjct: 73554 ttccatttttattttattgt 73573
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>gb|AC087738.13| Homo sapiens chromosome 15, clone RP11-365F16, complete sequence
          Length = 181511

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cttccatttttattttattg 77
              ||||||||||||||||||||
Sbjct: 100303 cttccatttttattttattg 100322
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>gb|AF112855.1|AF112855 Mus musculus Ste20-related kinase SMAK (SMAK) mRNA, complete cds
          Length = 5253

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   cacacactgcaggctgctgc 105
            ||||||||||||||||||||
Sbjct: 1907 cacacactgcaggctgctgc 1888
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 94      gcaggctgctgcagcgactc 113
               ||||||||||||||||||||
Sbjct: 3413388 gcaggctgctgcagcgactc 3413369
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>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0037C04
          Length = 137879

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   gtcgcagcatttccacggcctctc 431
             ||||||||| ||||||||||||||
Sbjct: 51417 gtcgcagcacttccacggcctctc 51440
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>emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, complete sequence
          Length = 229574

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    tccatttttattttattgtt 79
             ||||||||||||||||||||
Sbjct: 43736 tccatttttattttattgtt 43717
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>emb|CR394522.8| Zebrafish DNA sequence from clone DKEY-159D6 in linkage group 22,
             complete sequence
          Length = 91897

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    atttttattttattgtttac 82
             ||||||||||||||||||||
Sbjct: 55670 atttttattttattgtttac 55689
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>dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA for trypsin
           inhibitor, complete cds
          Length = 1061

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 408 gtcgcagcatttccacggcctctc 431
           ||||||||| ||||||||||||||
Sbjct: 386 gtcgcagcacttccacggcctctc 363
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>dbj|AK122218.1| Mus musculus mRNA for mKIAA0204 protein
          Length = 5840

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   cacacactgcaggctgctgc 105
            ||||||||||||||||||||
Sbjct: 2359 cacacactgcaggctgctgc 2340
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>gb|AC007450.1| Homo sapiens 12 BAC RP11-434C1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 210779

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     catttttattttattgttta 81
              ||||||||||||||||||||
Sbjct: 117179 catttttattttattgttta 117198
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>emb|AL954843.8| Zebrafish DNA sequence from clone DKEY-149K8 in linkage group 15,
              complete sequence
          Length = 204599

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     cttccatttttattttattg 77
              ||||||||||||||||||||
Sbjct: 156618 cttccatttttattttattg 156599
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>emb|AL935326.13| Mouse DNA sequence from clone RP23-10L17 on chromosome 2, complete
              sequence
          Length = 224044

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 53     ctgagcttccatttttattttatt 76
              ||||||||||| ||||||||||||
Sbjct: 209887 ctgagcttccaattttattttatt 209864
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>gb|AF039574.1|AF039574 Mus musculus serine/threonine protein kinase mRNA, complete cds
          Length = 4279

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   cacacactgcaggctgctgc 105
            ||||||||||||||||||||
Sbjct: 2023 cacacactgcaggctgctgc 2004
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>gb|AC118593.6| Mus musculus chromosome 19, clone RP24-464I2, complete sequence
          Length = 126059

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    acatgcacacactgcaggct 100
             ||||||||||||||||||||
Sbjct: 17417 acatgcacacactgcaggct 17398



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    acatgcacacactgcaggct 100
             ||||||||||||||||||||
Sbjct: 17339 acatgcacacactgcaggct 17320
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>emb|CR392001.6| Zebrafish DNA sequence from clone DKEY-70B24 in linkage group 14,
              complete sequence
          Length = 182769

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     tttttattttattgtttaca 83
              ||||||||||||||||||||
Sbjct: 134067 tttttattttattgtttaca 134048
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>gb|AC005587.1| Homo sapiens PAC clone RP5-988G15 from 6, complete sequence
          Length = 140915

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     catttttattttattgttta 81
              ||||||||||||||||||||
Sbjct: 121359 catttttattttattgttta 121378
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>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0044F08
          Length = 141528

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 408  gtcgcagcatttccacggcctctc 431
            ||||||||| ||||||||||||||
Sbjct: 2987 gtcgcagcacttccacggcctctc 3010


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,380,429
Number of Sequences: 3902068
Number of extensions: 4380429
Number of successful extensions: 127619
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127365
Number of HSP's gapped (non-prelim): 254
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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