ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags19m05 |
|---|---|
| Clone Library Name | barley_pub |
>MGST3_MOUSE (Q9CPU4) Microsomal glutathione S-transferase 3 (EC 2.5.1.18)| (Microsomal GST-3) (Microsomal GST-III) Length = 153 Score = 100 bits (250), Expect = 2e-21 Identities = 49/111 (44%), Positives = 69/111 (62%), Gaps = 2/111 (1%) Frame = -3 Query: 543 MSFQVGGARKKYKVSYPTMYAIEAENKDAKRFNCVQRGHQNSLEMMPLFFVTLLLGGLQH 364 ++ VG ARKKYKV YP MY+ + EN FNC+QR HQN+LE+ P F L +GG+ H Sbjct: 25 LAINVGKARKKYKVEYPVMYSTDPEN--GHMFNCIQRAHQNTLEVYPPFLFFLTVGGVYH 82 Query: 363 PVVAAALGVMYTVARFFYFKGYATGVPENRLK--LGGLNFLAIIGLILCTA 217 P +A+ LG+ + + R Y GY TG P R + +G L A++G +C+A Sbjct: 83 PRIASGLGLAWIIGRVLYAYGYYTGDPSKRYRGAVGSLALFALMGTTVCSA 133
>MGST3_HUMAN (O14880) Microsomal glutathione S-transferase 3 (EC 2.5.1.18)| (Microsomal GST-3) (Microsomal GST-III) Length = 152 Score = 99.0 bits (245), Expect = 9e-21 Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 2/111 (1%) Frame = -3 Query: 543 MSFQVGGARKKYKVSYPTMYAIEAENKDAKRFNCVQRGHQNSLEMMPLFFVTLLLGGLQH 364 ++ V ARKKYKV YP MY+ + EN FNC+QR HQN+LE+ P F L +GG+ H Sbjct: 25 LAINVSKARKKYKVEYPIMYSTDPENGHI--FNCIQRAHQNTLEVYPPFLFFLAVGGVYH 82 Query: 363 PVVAAALGVMYTVARFFYFKGYATGVPENRLK--LGGLNFLAIIGLILCTA 217 P +A+ LG+ + V R Y GY TG P R + LG + L ++G +C+A Sbjct: 83 PRIASGLGLAWIVGRVLYAYGYYTGEPSKRSRGALGSIALLGLVGTTVCSA 133
>MGST2_HUMAN (Q99735) Microsomal glutathione S-transferase 2 (EC 2.5.1.18)| (Microsomal GST-2) (Microsomal GST-II) Length = 147 Score = 59.7 bits (143), Expect = 6e-09 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 5/117 (4%) Frame = -3 Query: 546 WMSFQVGGARKKYKVSYPTMYAIEAENKDAKRFNCVQRGHQNSLEMMPLFFVTLLLGGLQ 367 + + QVG AR KYKV+ P + + F V R QN +E P+F +TL + G Sbjct: 21 YFALQVGKARLKYKVTPPAVTG-------SPEFERVFRAQQNCVEFYPIFIITLWMAGWY 73 Query: 366 -HPVVAAALGVMYTVARFFYFKGYATGVPEN----RLKLGGLNFLAIIGLILCTASF 211 + V A LG++Y R YF GY+ + RL LG L L ++G + SF Sbjct: 74 FNQVFATCLGLVYIYGRHLYFWGYSEAAKKRITGFRLSLGILALLTLLGALGIANSF 130
>LTC4S_HUMAN (Q16873) Leukotriene C4 synthase (EC 4.4.1.20) (Leukotriene-C(4)| synthase) (LTC4 synthase) Length = 150 Score = 48.1 bits (113), Expect = 2e-05 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 2/119 (1%) Frame = -3 Query: 555 LNFWMSFQVGGARKKYKVSYPTMYAIEAENKDAKRFNCVQRGHQNSLEMMPLFFVTLLLG 376 L + S QV AR+ ++VS P F V R N E PLF TL + Sbjct: 18 LQAYFSLQVISARRAFRVSPPL-------TTGPPEFERVYRAQVNCSEYFPLFLATLWVA 70 Query: 375 GLQ-HPVVAAALGVMYTVARFFYFKGYATGVPENRLKLGGLNFLA-IIGLILCTASFGI 205 G+ H AA G++Y AR YF+GYA +L+L L A + L++ A+ G+ Sbjct: 71 GIFFHEGAAALCGLVYLFARLRYFQGYARSA---QLRLAPLYASARALWLLVALAALGL 126
>LTC4S_MOUSE (Q60860) Leukotriene C4 synthase (EC 4.4.1.20) (Leukotriene-C(4)| synthase) (LTC4 synthase) Length = 150 Score = 45.4 bits (106), Expect = 1e-04 Identities = 32/88 (36%), Positives = 39/88 (44%), Gaps = 1/88 (1%) Frame = -3 Query: 555 LNFWMSFQVGGARKKYKVSYPTMYAIEAENKDAKRFNCVQRGHQNSLEMMPLFFVTLLLG 376 L + S QV AR+ + VS P F V R N E PLF TL + Sbjct: 18 LQAYFSLQVISARRAFHVSPPL-------TSGPPEFERVFRAQVNCSEYFPLFLATLWVA 70 Query: 375 GLQ-HPVVAAALGVMYTVARFFYFKGYA 295 G+ H AA G+ Y AR YF+GYA Sbjct: 71 GIFFHEGAAALCGLFYLFARLRYFQGYA 98
>FLAP_RAT (P20291) Arachidonate 5-lipoxygenase-activating protein (FLAP)| (MK-886-binding protein) Length = 161 Score = 33.5 bits (75), Expect = 0.48 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -3 Query: 450 FNCVQRGHQNSLEMMPLFFVTLLLGGLQ-HPVVAAALGVMYTVARFFYFKGY 298 F V +QN ++ P F V L GL V AA G+MY R YF GY Sbjct: 50 FERVYTANQNCVDAYPTFLVVLWTAGLLCSQVPAAFAGLMYLFVRQKYFVGY 101
>FLAP_MOUSE (P30355) Arachidonate 5-lipoxygenase-activating protein (FLAP)| (MK-886-binding protein) Length = 161 Score = 33.5 bits (75), Expect = 0.48 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -3 Query: 450 FNCVQRGHQNSLEMMPLFFVTLLLGGLQ-HPVVAAALGVMYTVARFFYFKGY 298 F V +QN ++ P F V L GL V AA G+MY R YF GY Sbjct: 50 FERVYTANQNCVDAYPTFLVVLWTAGLLCSQVPAAFAGLMYLFVRQKYFVGY 101
>FLAP_SHEEP (P30358) 5-lipoxygenase-activating protein (FLAP) (MK-886-binding| protein) (Fragment) Length = 153 Score = 32.7 bits (73), Expect = 0.81 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -3 Query: 450 FNCVQRGHQNSLEMMPLFFVTLLLGGLQ-HPVVAAALGVMYTVARFFYFKGY 298 F V +QN ++ P F V L GL V AA G+MY R YF GY Sbjct: 50 FERVYTANQNCVDAYPTFLVMLWSAGLLCSQVPAAFAGLMYLFVRQKYFVGY 101
>FLAP_PIG (P30356) Arachidonate 5-lipoxygenase-activating protein (FLAP)| (MK-886-binding protein) (Fragment) Length = 153 Score = 32.7 bits (73), Expect = 0.81 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -3 Query: 450 FNCVQRGHQNSLEMMPLFFVTLLLGGLQHPVVAAAL-GVMYTVARFFYFKGY 298 F V +QN ++ P F V L GL V AA G+MY R YF GY Sbjct: 50 FERVYTANQNCVDAYPTFLVVLWSAGLFCSQVPAAFAGLMYLFVRQKYFVGY 101
>FLAP_HORSE (P30353) Arachidonate 5-lipoxygenase-activating protein (FLAP)| (MK-886-binding protein) (Fragment) Length = 153 Score = 32.7 bits (73), Expect = 0.81 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -3 Query: 450 FNCVQRGHQNSLEMMPLFFVTLLLGGLQ-HPVVAAALGVMYTVARFFYFKGY 298 F V +QN ++ P F V L GL V AA G+MY R YF GY Sbjct: 50 FERVYTANQNCVDAYPTFLVMLWSAGLLCSQVPAAFAGLMYLFVRQKYFVGY 101
>FLAP_MACMU (P30354) Arachidonate 5-lipoxygenase-activating protein (FLAP)| (MK-886-binding protein) (Fragment) Length = 153 Score = 32.3 bits (72), Expect = 1.1 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -3 Query: 450 FNCVQRGHQNSLEMMPLFFVTLLLGGLQ-HPVVAAALGVMYTVARFFYFKGY 298 F V +QN ++ P F L GL V AA G+MY + R YF GY Sbjct: 50 FERVYTANQNCVDAYPTFLAVLWSAGLLCSQVPAAFAGLMYLLVRQKYFVGY 101
>FLAP_RABIT (P30357) Arachidonate 5-lipoxygenase-activating protein (FLAP)| (MK-886-binding protein) (Fragment) Length = 153 Score = 32.0 bits (71), Expect = 1.4 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = -3 Query: 450 FNCVQRGHQNSLEMMPLFFVTLLLGGLQ-HPVVAAALGVMYTVARFFYFKGY 298 F V +QN ++ P F L GL V AA G+MY R YF GY Sbjct: 50 FERVYTANQNCVDAYPTFLAVLWTAGLLCSQVPAAFAGLMYLFVRQKYFVGY 101
>FLAP_HUMAN (P20292) Arachidonate 5-lipoxygenase-activating protein (FLAP)| (MK-886-binding protein) Length = 161 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = -3 Query: 450 FNCVQRGHQNSLEMMPLFFVTLLLGGLQ-HPVVAAALGVMYTVARFFYFKGY 298 F V +QN ++ P F L GL V AA G+MY R YF GY Sbjct: 50 FERVYTANQNCVDAYPTFLAVLWSAGLLCSQVPAAFAGLMYLFVRQKYFVGY 101
>AMD_MOUSE (P97467) Peptidyl-glycine alpha-amidating monooxygenase precursor| (EC 1.14.17.3) (PAM) Length = 979 Score = 31.2 bits (69), Expect = 2.4 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 Query: 265 KLEAVLRDAGGVALEVEEPGDGVHDPQRGGDDRV 366 +LE+ LR A AL ++PG+G +P+ GD V Sbjct: 468 RLESTLRPAESRALSFQQPGEGPWEPELAGDFHV 501
>MURC_NOCFA (Q5YYX8) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 501 Score = 29.6 bits (65), Expect = 6.9 Identities = 18/32 (56%), Positives = 19/32 (59%) Frame = +1 Query: 439 DAVESLGVLVLRLDGVHRRVGHLVLLAGAADL 534 DA ES GVL LR G R+GH AGA DL Sbjct: 49 DAKESRGVLALRARGAQVRIGH---DAGALDL 77
>NRX1B_RAT (Q63373) Neurexin-1-beta precursor (Neurexin I-beta)| Length = 468 Score = 29.3 bits (64), Expect = 9.0 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -2 Query: 268 AWGAQLLGDHRAHPLHGVVRH 206 AWGA LG H H HG +H Sbjct: 44 AWGASSLGAHHIHHFHGSSKH 64
>NRX1B_BOVIN (Q28142) Neurexin-1-beta precursor (Neurexin I-beta)| Length = 467 Score = 29.3 bits (64), Expect = 9.0 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -2 Query: 268 AWGAQLLGDHRAHPLHGVVRH 206 AWGA LG H H HG +H Sbjct: 43 AWGASSLGAHHIHHFHGSSKH 63
>NRX1B_HUMAN (P58400) Neurexin-1-beta precursor (Neurexin I-beta)| Length = 442 Score = 29.3 bits (64), Expect = 9.0 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -2 Query: 268 AWGAQLLGDHRAHPLHGVVRH 206 AWGA LG H H HG +H Sbjct: 48 AWGASSLGAHHIHHFHGSSKH 68
>DNAJ_DEIPR (O34136) Chaperone protein dnaJ| Length = 307 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%) Frame = -2 Query: 538 LPGRR----RPQEVQGVLPDDVRHRGGEQGRQAIQLRPEGAP 425 L GRR RPQ VQ + P DVR G G + P+G P Sbjct: 84 LSGRRLRRVRPQPVQRLFPGDVRGPGRWHGSRGGFTSPDGRP 125
>LOLB_XYLFT (Q87A20) Outer-membrane lipoprotein lolB precursor| Length = 218 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = -2 Query: 553 QLLDELPGRRRPQEVQGVLPDDVRHRGGEQGRQAIQLRPEGAP 425 Q+L E G + P G+LPD VR R + G +QL EG P Sbjct: 129 QVLFEATGWQVPM---GLLPDWVRGRNSDSGGGDVQLDAEGRP 168
>AMD_RAT (P14925) Peptidyl-glycine alpha-amidating monooxygenase precursor| (EC 1.14.17.3) (PAM) Length = 976 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 265 KLEAVLRDAGGVALEVEEPGDGVHDPQRGGDDRV 366 +LE+ LR A A ++PG+G +P+ GD V Sbjct: 468 QLESTLRPAESRAFSFQQPGEGPWEPEPSGDFHV 501 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,999,082 Number of Sequences: 219361 Number of extensions: 1241448 Number of successful extensions: 3945 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3849 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3931 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
