ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19m05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469492.1| Oryza sativa (japonica cultivar-group), mRNA 440 e-120
2dbj|AK062406.1| Oryza sativa (japonica cultivar-group) cDNA clon... 440 e-120
3gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome... 224 3e-55
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 224 3e-55
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 224 3e-55
6emb|X82071.1|PAHEMA Pseudomonas aeruginosa hemA gene, ORF2, ORF3... 44 0.52
7gb|AE004880.1| Pseudomonas aeruginosa PAO1, section 441 of 529 o... 44 0.52
8emb|AJ132555.1|MPL132555 Mus platythrix internal transcribed spa... 44 0.52
9gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 44 0.52
10gb|AC159288.4| Mus musculus BAC clone RP23-300L21 from chromosom... 42 2.0
11gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 42 2.0
12gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 2.0
13gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.0
14dbj|AK108299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
15emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 2.0
16gb|BC029669.1| Mus musculus microsomal glutathione S-transferase... 40 8.1
17gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 8.1
18gb|AC113970.8| Mus musculus chromosome 1, clone RP23-125E16, com... 40 8.1
19emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 8.1
20ref|XM_824061.1| Trypanosoma brucei TREU927 hypothetical protein... 40 8.1
21ref|XM_846395.1| PREDICTED: Canis familiaris similar to CUB and ... 40 8.1
22ref|XM_387625.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 8.1
23emb|CR644435.2|CNS0EW7T Tetraodon nigroviridis full-length cDNA 40 8.1
24gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 8.1
25emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genom... 40 8.1
26gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 8.1
27gb|AC148335.4| Mus musculus BAC clone RP23-103H10 from chromosom... 40 8.1
28dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 8.1
29gb|AE012039.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 8.1
30gb|AE012311.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 8.1
31gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 8.1
32gb|AC026395.11| Homo sapiens chromosome 10 clone RP11-45D20, com... 40 8.1
33gb|AC025947.9| Homo sapiens chromosome 10 clone RP11-78A18, comp... 40 8.1
34dbj|AK135742.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 8.1
35dbj|AK003492.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 8.1
36dbj|AK003476.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 8.1
37dbj|AK003309.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 8.1
38dbj|AK003246.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 8.1
39gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 8.1
40gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 8.1
41dbj|AK008533.1| Mus musculus adult male small intestine cDNA, RI... 40 8.1
42ref|NM_074156.2| Caenorhabditis elegans Sperm-Specific family, c... 40 8.1
43emb|BX890610.8| Zebrafish DNA sequence from clone DKEY-122C9, co... 40 8.1
44gb|AE004461.1| Pseudomonas aeruginosa PAO1, section 22 of 529 of... 40 8.1
45ref|XM_213943.3| PREDICTED: Rattus norvegicus microsomal glutath... 40 8.1
46gb|AF275376.1|AF275376 Platichthys flesus taurine transporter mR... 40 8.1
47dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 8.1
48gb|AF077869.2|AF077869 Streptomyces argillaceus glycosyltransfer... 40 8.1
49emb|Z77662.1|CEF47B8 Caenorhabditis elegans Cosmid F47B8, comple... 40 8.1
50gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 8.1
51ref|NM_025569.1| Mus musculus microsomal glutathione S-transfera... 40 8.1
52gb|AC123806.4| Mus musculus BAC clone RP24-152B7 from 10, comple... 40 8.1
53emb|CT005238.2| Methylocapsa acidiphila B2, overlapping BAC clon... 40 8.1 
>ref|XM_469492.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 900

 Score =  440 bits (222), Expect = e-120
 Identities = 351/394 (89%)
 Strand = Plus / Minus

                                                                       
Query: 200 aggttgatgccgaacgacgccgtgcagaggatgagcccgatgatcgccaagaagttgagc 259
           ||||||||||||||||| |||||||||| ||| | ||| | ||||||||||||||| |||
Sbjct: 521 aggttgatgccgaacgaagccgtgcagatgatcaacccaaagatcgccaagaagttcagc 462

                                                                       
Query: 260 cccccaagcttgaggcggttctccgggacgccggtggcgtagcccttgaagtagaagaac 319
           ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 461 cccccaatcttgaggcggttgtccgggatgccggtggcgtagcccttgaagtagaagaac 402

                                                                       
Query: 320 ctggcgacggtgtacatgacccccagcgcggcggcgacgaccgggtgctgcaggccgccg 379
           || ||||||| ||| |  ||||| ||| | |||||||||| |||||||||||| ||||||
Sbjct: 401 ctcgcgacggcgtagaacaccccgagccccgcggcgacgagcgggtgctgcagcccgccg 342

                                                                       
Query: 380 agcagcagcgtgacgaagaagagcggcatcatctccagcgagttctggtgccccctctgg 439
           | |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| 
Sbjct: 341 accagcagcgtgacgaagaacagcggcatcatctccagcgagttctggtgcccccgctgc 282

                                                                       
Query: 440 acgcagttgaatcgcttggcgtccttgttctccgcctcgatggcgtacatcgtcgggtag 499
           |||||||||||  ||||||||||||||||||||| |||||  |||||||| || ||||||
Sbjct: 281 acgcagttgaagagcttggcgtccttgttctccgactcgaccgcgtacatggtggggtag 222

                                                                       
Query: 500 gacaccttgtacttcttgcgggcgccgccgacctggaagctcatccagaagttgaggaag 559
            |||||||||||||  |||||||   ||||||||||||||||||||||||||||||||| 
Sbjct: 221 aacaccttgtactttctgcgggccttgccgacctggaagctcatccagaagttgaggaac 162

                                             
Query: 560 gcataggcgaccacggcgagcaccacgtagccgt 593
           || ||||||||||  || ||||||||||| ||||
Sbjct: 161 gcgtaggcgaccagcgccagcaccacgtacccgt 128
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>dbj|AK062406.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-E08, full
           insert sequence
          Length = 926

 Score =  440 bits (222), Expect = e-120
 Identities = 351/394 (89%)
 Strand = Plus / Minus

                                                                       
Query: 200 aggttgatgccgaacgacgccgtgcagaggatgagcccgatgatcgccaagaagttgagc 259
           ||||||||||||||||| |||||||||| ||| | ||| | ||||||||||||||| |||
Sbjct: 532 aggttgatgccgaacgaagccgtgcagatgatcaacccaaagatcgccaagaagttcagc 473

                                                                       
Query: 260 cccccaagcttgaggcggttctccgggacgccggtggcgtagcccttgaagtagaagaac 319
           ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 472 cccccaatcttgaggcggttgtccgggatgccggtggcgtagcccttgaagtagaagaac 413

                                                                       
Query: 320 ctggcgacggtgtacatgacccccagcgcggcggcgacgaccgggtgctgcaggccgccg 379
           || ||||||| ||| |  ||||| ||| | |||||||||| |||||||||||| ||||||
Sbjct: 412 ctcgcgacggcgtagaacaccccgagccccgcggcgacgagcgggtgctgcagcccgccg 353

                                                                       
Query: 380 agcagcagcgtgacgaagaagagcggcatcatctccagcgagttctggtgccccctctgg 439
           | |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| 
Sbjct: 352 accagcagcgtgacgaagaacagcggcatcatctccagcgagttctggtgcccccgctgc 293

                                                                       
Query: 440 acgcagttgaatcgcttggcgtccttgttctccgcctcgatggcgtacatcgtcgggtag 499
           |||||||||||  ||||||||||||||||||||| |||||  |||||||| || ||||||
Sbjct: 292 acgcagttgaagagcttggcgtccttgttctccgactcgaccgcgtacatggtggggtag 233

                                                                       
Query: 500 gacaccttgtacttcttgcgggcgccgccgacctggaagctcatccagaagttgaggaag 559
            |||||||||||||  |||||||   ||||||||||||||||||||||||||||||||| 
Sbjct: 232 aacaccttgtactttctgcgggccttgccgacctggaagctcatccagaagttgaggaac 173

                                             
Query: 560 gcataggcgaccacggcgagcaccacgtagccgt 593
           || ||||||||||  || ||||||||||| ||||
Sbjct: 172 gcgtaggcgaccagcgccagcaccacgtacccgt 139
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>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01
              map R1538, complete sequence
          Length = 142712

 Score =  224 bits (113), Expect = 3e-55
 Identities = 158/173 (91%)
 Strand = Plus / Minus

                                                                          
Query: 262    cccaagcttgaggcggttctccgggacgccggtggcgtagcccttgaagtagaagaacct 321
              ||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 112301 cccaatcttgaggcggttgtccgggatgccggtggcgtagcccttgaagtagaagaacct 112242

                                                                          
Query: 322    ggcgacggtgtacatgacccccagcgcggcggcgacgaccgggtgctgcaggccgccgag 381
               ||||||| ||| |  ||||| ||| | |||||||||| |||||||||||| ||||||| 
Sbjct: 112241 cgcgacggcgtagaacaccccgagccccgcggcgacgagcgggtgctgcagcccgccgac 112182

                                                                   
Query: 382    cagcagcgtgacgaagaagagcggcatcatctccagcgagttctggtgccccc 434
              |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 112181 cagcagcgtgacgaagaacagcggcatcatctccagcgagttctggtgccccc 112129



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                          
Query: 526    gccgacctggaagctcatccagaagttgaggaaggcataggcgaccacggcgagcaccac 585
              ||||||||||||||||||||||||||||||||| || ||||||||||  || ||||||||
Sbjct: 111838 gccgacctggaagctcatccagaagttgaggaacgcgtaggcgaccagcgccagcaccac 111779

                      
Query: 586    gtagccgt 593
              ||| ||||
Sbjct: 111778 gtacccgt 111771



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                          
Query: 440    acgcagttgaatcgcttggcgtccttgttctccgcctcgatggcgtacatcgtcgggtag 499
              |||||||||||  ||||||||||||||||||||| |||||  |||||||| || ||||||
Sbjct: 112037 acgcagttgaagagcttggcgtccttgttctccgactcgaccgcgtacatggtggggtag 111978

                          
Query: 500    gacaccttgtac 511
               |||||||||||
Sbjct: 111977 aacaccttgtac 111966



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                          
Query: 200    aggttgatgccgaacgacgccgtgcagaggatgagcccgatgatcgccaagaagttgagc 259
              ||||||||||||||||| |||||||||| ||| | ||| | ||||||||||||||| |||
Sbjct: 113217 aggttgatgccgaacgaagccgtgcagatgatcaacccaaagatcgccaagaagttcagc 113158

                  
Query: 260    cccc 263
              ||||
Sbjct: 113157 cccc 113154
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  224 bits (113), Expect = 3e-55
 Identities = 158/173 (91%)
 Strand = Plus / Plus

                                                                            
Query: 262      cccaagcttgaggcggttctccgggacgccggtggcgtagcccttgaagtagaagaacct 321
                ||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 28300741 cccaatcttgaggcggttgtccgggatgccggtggcgtagcccttgaagtagaagaacct 28300800

                                                                            
Query: 322      ggcgacggtgtacatgacccccagcgcggcggcgacgaccgggtgctgcaggccgccgag 381
                 ||||||| ||| |  ||||| ||| | |||||||||| |||||||||||| ||||||| 
Sbjct: 28300801 cgcgacggcgtagaacaccccgagccccgcggcgacgagcgggtgctgcagcccgccgac 28300860

                                                                     
Query: 382      cagcagcgtgacgaagaagagcggcatcatctccagcgagttctggtgccccc 434
                |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 28300861 cagcagcgtgacgaagaacagcggcatcatctccagcgagttctggtgccccc 28300913



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                            
Query: 526      gccgacctggaagctcatccagaagttgaggaaggcataggcgaccacggcgagcaccac 585
                ||||||||||||||||||||||||||||||||| || ||||||||||  || ||||||||
Sbjct: 28301204 gccgacctggaagctcatccagaagttgaggaacgcgtaggcgaccagcgccagcaccac 28301263

                        
Query: 586      gtagccgt 593
                ||| ||||
Sbjct: 28301264 gtacccgt 28301271



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                            
Query: 440      acgcagttgaatcgcttggcgtccttgttctccgcctcgatggcgtacatcgtcgggtag 499
                |||||||||||  ||||||||||||||||||||| |||||  |||||||| || ||||||
Sbjct: 28301005 acgcagttgaagagcttggcgtccttgttctccgactcgaccgcgtacatggtggggtag 28301064

                            
Query: 500      gacaccttgtac 511
                 |||||||||||
Sbjct: 28301065 aacaccttgtac 28301076



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 200      aggttgatgccgaacgacgccgtgcagaggatgagcccgatgatcgccaagaagttgagc 259
                ||||||||||||||||| |||||||||| ||| | ||| | ||||||||||||||| |||
Sbjct: 28299825 aggttgatgccgaacgaagccgtgcagatgatcaacccaaagatcgccaagaagttcagc 28299884

                    
Query: 260      cccc 263
                ||||
Sbjct: 28299885 cccc 28299888
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  224 bits (113), Expect = 3e-55
 Identities = 158/173 (91%)
 Strand = Plus / Plus

                                                                            
Query: 262      cccaagcttgaggcggttctccgggacgccggtggcgtagcccttgaagtagaagaacct 321
                ||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 28392065 cccaatcttgaggcggttgtccgggatgccggtggcgtagcccttgaagtagaagaacct 28392124

                                                                            
Query: 322      ggcgacggtgtacatgacccccagcgcggcggcgacgaccgggtgctgcaggccgccgag 381
                 ||||||| ||| |  ||||| ||| | |||||||||| |||||||||||| ||||||| 
Sbjct: 28392125 cgcgacggcgtagaacaccccgagccccgcggcgacgagcgggtgctgcagcccgccgac 28392184

                                                                     
Query: 382      cagcagcgtgacgaagaagagcggcatcatctccagcgagttctggtgccccc 434
                |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 28392185 cagcagcgtgacgaagaacagcggcatcatctccagcgagttctggtgccccc 28392237



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                            
Query: 526      gccgacctggaagctcatccagaagttgaggaaggcataggcgaccacggcgagcaccac 585
                ||||||||||||||||||||||||||||||||| || ||||||||||  || ||||||||
Sbjct: 28392528 gccgacctggaagctcatccagaagttgaggaacgcgtaggcgaccagcgccagcaccac 28392587

                        
Query: 586      gtagccgt 593
                ||| ||||
Sbjct: 28392588 gtacccgt 28392595



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                            
Query: 440      acgcagttgaatcgcttggcgtccttgttctccgcctcgatggcgtacatcgtcgggtag 499
                |||||||||||  ||||||||||||||||||||| |||||  |||||||| || ||||||
Sbjct: 28392329 acgcagttgaagagcttggcgtccttgttctccgactcgaccgcgtacatggtggggtag 28392388

                            
Query: 500      gacaccttgtac 511
                 |||||||||||
Sbjct: 28392389 aacaccttgtac 28392400



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 200      aggttgatgccgaacgacgccgtgcagaggatgagcccgatgatcgccaagaagttgagc 259
                ||||||||||||||||| |||||||||| ||| | ||| | ||||||||||||||| |||
Sbjct: 28391149 aggttgatgccgaacgaagccgtgcagatgatcaacccaaagatcgccaagaagttcagc 28391208

                    
Query: 260      cccc 263
                ||||
Sbjct: 28391209 cccc 28391212
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>emb|X82071.1|PAHEMA Pseudomonas aeruginosa hemA gene, ORF2, ORF3, prf1 gene and hemM
            gene, strain PAO1
          Length = 4781

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 373  gccgccgagcagcagcgtgacg 394
            ||||||||||||||||||||||
Sbjct: 2972 gccgccgagcagcagcgtgacg 2993
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>gb|AE004880.1| Pseudomonas aeruginosa PAO1, section 441 of 529 of the complete
            genome
          Length = 13518

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 373  gccgccgagcagcagcgtgacg 394
            ||||||||||||||||||||||
Sbjct: 9170 gccgccgagcagcagcgtgacg 9149
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>emb|AJ132555.1|MPL132555 Mus platythrix internal transcribed spacer 2
          Length = 1219

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 369 gcaggccgccgagcagcagcgtgacgaaga 398
           ||||||||||| ||||||||||| ||||||
Sbjct: 723 gcaggccgccgggcagcagcgtggcgaaga 694
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 373     gccgccgagcagcagcgtgacg 394
               ||||||||||||||||||||||
Sbjct: 1906471 gccgccgagcagcagcgtgacg 1906450
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>gb|AC159288.4| Mus musculus BAC clone RP23-300L21 from chromosome 7, complete sequence
          Length = 201500

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 23    cttgatcttacattacaaacc 43
             |||||||||||||||||||||
Sbjct: 87767 cttgatcttacattacaaacc 87787
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 359    accgggtgctgcaggccgccg 379
              |||||||||||||||||||||
Sbjct: 620704 accgggtgctgcaggccgccg 620724
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 365     tgctgcaggccgccgagcagcagcg 389
               |||||| ||||||||||||||||||
Sbjct: 2097396 tgctgctggccgccgagcagcagcg 2097372
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 339     cccccagcgcggcggcgacga 359
               |||||||||||||||||||||
Sbjct: 2584663 cccccagcgcggcggcgacga 2584643
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>dbj|AK108299.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-E11, full
           insert sequence
          Length = 949

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 369 gcaggccgccgagcagcagcg 389
           |||||||||||||||||||||
Sbjct: 797 gcaggccgccgagcagcagcg 817
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 370     caggccgccgagcagcagcgtgacg 394
               ||||||||||||||||| |||||||
Sbjct: 2971192 caggccgccgagcagcaacgtgacg 2971168
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>gb|BC029669.1| Mus musculus microsomal glutathione S-transferase 3, mRNA (cDNA
           clone MGC:35738 IMAGE:5372427), complete cds
          Length = 614

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 503 accttgtacttcttgcgggc 522
           ||||||||||||||||||||
Sbjct: 146 accttgtacttcttgcgggc 127
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 369     gcaggccgccgagcagcagc 388
               ||||||||||||||||||||
Sbjct: 4122758 gcaggccgccgagcagcagc 4122739
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>gb|AC113970.8| Mus musculus chromosome 1, clone RP23-125E16, complete sequence
          Length = 235703

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 503    accttgtacttcttgcgggc 522
              ||||||||||||||||||||
Sbjct: 138718 accttgtacttcttgcgggc 138737
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 360     ccgggtgctgcaggccgccg 379
               ||||||||||||||||||||
Sbjct: 4611247 ccgggtgctgcaggccgccg 4611266
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>ref|XM_824061.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.2670)
            partial mRNA
          Length = 2547

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 363  ggtgctgcaggccgccgagcagca 386
            |||||||||||||| |||||||||
Sbjct: 1344 ggtgctgcaggccgtcgagcagca 1367
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>ref|XM_846395.1| PREDICTED: Canis familiaris similar to CUB and Sushi multiple
           domains 2 (LOC609181), mRNA
          Length = 561

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 agagcggcatcatctccagc 418
           ||||||||||||||||||||
Sbjct: 383 agagcggcatcatctccagc 402
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>ref|XM_387625.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07449.1)
           partial mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 521 gcgccgccgacctggaagct 540
           ||||||||||||||||||||
Sbjct: 419 gcgccgccgacctggaagct 438
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>emb|CR644435.2|CNS0EW7T Tetraodon nigroviridis full-length cDNA
          Length = 626

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 370 caggccgccgagcagcagcgtgacgaag 397
           ||||||||| |||||||||||| |||||
Sbjct: 229 caggccgcccagcagcagcgtgccgaag 202
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 376     gccgagcagcagcgtgacga 395
               ||||||||||||||||||||
Sbjct: 1720276 gccgagcagcagcgtgacga 1720257
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>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 365    tgctgcaggccgccgagcagcagc 388
              |||||||||||||||||| |||||
Sbjct: 142853 tgctgcaggccgccgagctgcagc 142876
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 365     tgctgcaggccgccgagcag 384
               ||||||||||||||||||||
Sbjct: 1505427 tgctgcaggccgccgagcag 1505446
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>gb|AC148335.4| Mus musculus BAC clone RP23-103H10 from chromosome 10, complete sequence
          Length = 210685

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    ttgaagtagaagaacctggc 324
              ||||||||||||||||||||
Sbjct: 205321 ttgaagtagaagaacctggc 205340
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    ccgggtgctgcaggccgccg 379
              ||||||||||||||||||||
Sbjct: 515738 ccgggtgctgcaggccgccg 515719
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>gb|AE012039.1| Xanthomonas axonopodis pv. citri str. 306,  section 417 of 469 of the
            complete genome
          Length = 10587

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 360  ccgggtgctgcaggccgccg 379
            ||||||||||||||||||||
Sbjct: 7095 ccgggtgctgcaggccgccg 7114
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>gb|AE012311.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 219
            of 460 of the complete genome
          Length = 5810

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  aggttgatgccgaacgacgc 219
            ||||||||||||||||||||
Sbjct: 1448 aggttgatgccgaacgacgc 1467
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    cgaccgggtgctgcaggccg 376
              ||||||||||||||||||||
Sbjct: 462344 cgaccgggtgctgcaggccg 462325
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>gb|AC026395.11| Homo sapiens chromosome 10 clone RP11-45D20, complete sequence
          Length = 172777

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 85     acacacatttcttgacactataaa 108
              |||||||||||||| |||||||||
Sbjct: 128959 acacacatttcttggcactataaa 128936
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>gb|AC025947.9| Homo sapiens chromosome 10 clone RP11-78A18, complete sequence
          Length = 159082

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 85    acacacatttcttgacactataaa 108
             |||||||||||||| |||||||||
Sbjct: 53853 acacacatttcttggcactataaa 53830
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>dbj|AK135742.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420409G23 product:microsomal
           glutathione S-transferase 3, full insert sequence
          Length = 604

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 503 accttgtacttcttgcgggc 522
           ||||||||||||||||||||
Sbjct: 142 accttgtacttcttgcgggc 123
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>dbj|AK003492.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110006E17 product:microsomal
           glutathione S-transferase 3, full insert sequence
          Length = 628

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 503 accttgtacttcttgcgggc 522
           ||||||||||||||||||||
Sbjct: 160 accttgtacttcttgcgggc 141
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>dbj|AK003476.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110005L17 product:microsomal
           glutathione S-transferase 3, full insert sequence
          Length = 626

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 503 accttgtacttcttgcgggc 522
           ||||||||||||||||||||
Sbjct: 160 accttgtacttcttgcgggc 141
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>dbj|AK003309.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110002K08 product:microsomal
           glutathione S-transferase 3, full insert sequence
          Length = 614

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 503 accttgtacttcttgcgggc 522
           ||||||||||||||||||||
Sbjct: 153 accttgtacttcttgcgggc 134
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>dbj|AK003246.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110001M02 product:microsomal
           glutathione S-transferase 3, full insert sequence
          Length = 635

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 503 accttgtacttcttgcgggc 522
           ||||||||||||||||||||
Sbjct: 167 accttgtacttcttgcgggc 148
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 342     ccagcgcggcggcgacgacc 361
               ||||||||||||||||||||
Sbjct: 3100199 ccagcgcggcggcgacgacc 3100180
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 200     aggttgatgccgaacgacgc 219
               ||||||||||||||||||||
Sbjct: 2558288 aggttgatgccgaacgacgc 2558269
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>dbj|AK008533.1| Mus musculus adult male small intestine cDNA, RIKEN full-length
           enriched library, clone:2010306B17 product:microsomal
           glutathione S-transferase 3, full insert sequence
          Length = 627

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 503 accttgtacttcttgcgggc 522
           ||||||||||||||||||||
Sbjct: 156 accttgtacttcttgcgggc 137
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>ref|NM_074156.2| Caenorhabditis elegans Sperm-Specific family, class S family member
           (sss-2) (sss-2) mRNA, complete cds
          Length = 846

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 535 gaagctcatccagaagttga 554
           ||||||||||||||||||||
Sbjct: 363 gaagctcatccagaagttga 344
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>emb|BX890610.8| Zebrafish DNA sequence from clone DKEY-122C9, complete sequence
          Length = 189827

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     gtactgcaaagctaaaacct 24
             ||||||||||||||||||||
Sbjct: 28285 gtactgcaaagctaaaacct 28266
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>gb|AE004461.1| Pseudomonas aeruginosa PAO1, section 22 of 529 of the complete genome
          Length = 11266

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 369  gcaggccgccgagcagcagc 388
            ||||||||||||||||||||
Sbjct: 7380 gcaggccgccgagcagcagc 7399
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>ref|XM_213943.3| PREDICTED: Rattus norvegicus microsomal glutathione S-transferase 3
           (predicted) (Mgst3_predicted), mRNA
          Length = 678

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 503 accttgtacttcttgcgggc 522
           ||||||||||||||||||||
Sbjct: 194 accttgtacttcttgcgggc 175
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>gb|AF275376.1|AF275376 Platichthys flesus taurine transporter mRNA, partial cds
          Length = 542

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 380 agcagcagcgtgacgaagaagagc 403
           ||||||||| ||||||||||||||
Sbjct: 88  agcagcagcatgacgaagaagagc 65
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 373     gccgccgagcagcagcgtga 392
               ||||||||||||||||||||
Sbjct: 3865195 gccgccgagcagcagcgtga 3865176
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>gb|AF077869.2|AF077869 Streptomyces argillaceus glycosyltransferase (mtmGIV),
           glycosyltransferase (mtmGIII), c-methyltransferase
           (mtmMII), o-methyltransferase (mtmMI),
           glycosyltransferase (mtmGII), glycosyltransferase
           (mtmGI), and oxygenase (mtmOIV) genes, complete cds; and
           MtrX (mtrX) gene, partial cds
          Length = 9316

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 341 cccagcgcggcggcgacgaccggg 364
           ||||||||||||||||| ||||||
Sbjct: 475 cccagcgcggcggcgaccaccggg 452
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>emb|Z77662.1|CEF47B8 Caenorhabditis elegans Cosmid F47B8, complete sequence
          Length = 34899

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 535   gaagctcatccagaagttga 554
             ||||||||||||||||||||
Sbjct: 33106 gaagctcatccagaagttga 33087
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    ccgggtgctgcaggccgccg 379
              ||||||||||||||||||||
Sbjct: 527882 ccgggtgctgcaggccgccg 527863
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>ref|NM_025569.1| Mus musculus microsomal glutathione S-transferase 3 (Mgst3), mRNA
          Length = 635

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 503 accttgtacttcttgcgggc 522
           ||||||||||||||||||||
Sbjct: 167 accttgtacttcttgcgggc 148
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>gb|AC123806.4| Mus musculus BAC clone RP24-152B7 from 10, complete sequence
          Length = 160167

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    ttgaagtagaagaacctggc 324
              ||||||||||||||||||||
Sbjct: 138163 ttgaagtagaagaacctggc 138144
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>emb|CT005238.2| Methylocapsa acidiphila B2, overlapping BAC clones, complete sequence
          Length = 100887

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   gatgagcccgatgatcgcca 248
             ||||||||||||||||||||
Sbjct: 98310 gatgagcccgatgatcgcca 98329


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,257,705
Number of Sequences: 3902068
Number of extensions: 4257705
Number of successful extensions: 96209
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93816
Number of HSP's gapped (non-prelim): 2393
length of query: 593
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 570
effective length of database: 17,143,297,704
effective search space: 9771679691280
effective search space used: 9771679691280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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