ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19m04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_468526.1| Oryza sativa (japonica cultivar-group), mRNA 266 9e-68
2ref|XM_507554.1| PREDICTED Oryza sativa (japonica cultivar-group... 266 9e-68
3ref|XM_468525.1| Oryza sativa (japonica cultivar-group), mRNA 266 9e-68
4ref|XM_507553.1| PREDICTED Oryza sativa (japonica cultivar-group... 266 9e-68
5ref|XM_507067.2| PREDICTED Oryza sativa (japonica cultivar-group... 266 9e-68
6dbj|AK122029.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 9e-68
7dbj|AK104532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 9e-68
8dbj|AK104364.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 9e-68
9dbj|AK065244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 9e-68
10dbj|AK064830.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 9e-68
11dbj|AK065885.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54
12gb|AY112293.1| Zea mays CL19799_1 mRNA sequence 147 5e-32
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
14dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
15ref|NM_119509.3| Arabidopsis thaliana catalytic AT4G33540 mRNA, ... 44 0.58
16emb|X77921.1|EAAMASL E.amylovara (Ea7/74) ams- A, B, C, D, E, F,... 44 0.58
17emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, ... 44 0.58
18emb|AL031394.1|ATT16L1 Arabidopsis thaliana DNA chromosome 4, BA... 44 0.58
19gb|AY093148.1| Arabidopsis thaliana putative protein (At4g33540)... 44 0.58
20dbj|AK054078.1| Mus musculus 2 days pregnant adult female oviduc... 44 0.58
21emb|BX827444.1|CNS0A2SJ Arabidopsis thaliana Full-length cDNA Co... 44 0.58
22gb|BT003391.1| Arabidopsis thaliana putative protein (At4g33540)... 44 0.58
23gb|BC082552.1| Mus musculus RIKEN cDNA A230063L24 gene, mRNA (cD... 44 0.58
24gb|AC171917.14| Mus musculus chromosome 8, clone RP23-390K13, co... 44 0.58
25gb|AC084567.1|CBRG36N05 Caenorhabditis briggsae cosmid G36N05, c... 42 2.3
26gb|AC170189.2| Mus musculus BAC clone RP23-103L12 from chromosom... 40 9.1
27gb|AC124226.12| Mus musculus chromosome 15, clone RP23-94G21, co... 40 9.1
28gb|AC139572.4| Mus musculus BAC clone RP24-196P9 from chromosome... 40 9.1
29gb|AC122934.2| Mus musculus BAC clone RP23-19A13 from 3, complet... 40 9.1
30emb|BX324210.12| Zebrafish DNA sequence from clone DKEY-20I20 in... 40 9.1
31emb|BX936372.3| Mouse DNA sequence from clone RP23-94O16 on chro... 40 9.1
32gb|AC015802.21| Homo sapiens chromosome 17, clone RP11-666A8, co... 40 9.1
33emb|BX323806.15| Zebrafish DNA sequence from clone DKEYP-123A9 i... 40 9.1
34emb|BX004966.12| Zebrafish DNA sequence from clone DKEY-5E12 in ... 40 9.1
35emb|CT025522.17| Mouse DNA sequence from clone RP23-332L23 on ch... 40 9.1
36gb|AC167563.3| Mus musculus BAC clone RP24-392I11 from chromosom... 40 9.1
37emb|AL928787.4| Mouse DNA sequence from clone RP23-435B11 on chr... 40 9.1
38gb|AC005899.1|AC005899 Homo sapiens chromosome 17, clone hRPK.2... 40 9.1

>ref|XM_468526.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1144

 Score =  266 bits (134), Expect = 9e-68
 Identities = 358/433 (82%)
 Strand = Plus / Minus

                                                                       
Query: 233 cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
           ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 959 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 900

                                                                       
Query: 293 cataccggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaact 352
            |||  |||||||||||||||| ||||||||| ||||||| || ||||  | ||  || |
Sbjct: 899 tataatggattcgatagccatgaccaggtaaaaaccactcgaagtctaacttcaacaatt 840

                                                                       
Query: 353 tcctcatgctatccagttgcaaattcactgattgcttgctgtacatccgaaagagattca 412
           | |||||||| ||||| |||||   |||||||||||||||||||||  |||||||||  |
Sbjct: 839 ttctcatgctgtccagctgcaagcccactgattgcttgctgtacataagaaagagatcta 780

                                                                       
Query: 413 gttcgtctgaatattctgattttgcgacatggtcgccagtgaatagtgcctttagcggtt 472
             || || || | |||||||||||| ||||| || |||||||| || |||||||  ||||
Sbjct: 779 aatcatcagattcttctgattttgcaacatgatctccagtgaaaagcgcctttactggtt 720

                                                                       
Query: 473 tgtacaacaagcagaccgatccttcggtgtggcctggggtatggataagttcaaaatcat 532
           |||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| 
Sbjct: 719 tgtagaataagcagactgaaccttcagtatgacctggggtatggataagttcgaaatcag 660

                                                                       
Query: 533 ttccaatgttccagggaccacttccagtaagtttccgctcgacatcagcagtaatgtcca 592
            |||||||| ||| || ||| ||||||||||||||| ||| ||||| |||||||  ||| 
Sbjct: 659 ctccaatgtcccatgggccatttccagtaagtttccactcaacatctgcagtaacatcct 600

                                                                       
Query: 593 ctacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgat 652
           ||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||
Sbjct: 599 ctacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgat 540

                        
Query: 653 ccgctacatcatc 665
           |||| ||||||||
Sbjct: 539 ccgcgacatcatc 527



to top

>ref|XM_507554.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2
            mRNA
          Length = 1218

 Score =  266 bits (134), Expect = 9e-68
 Identities = 358/433 (82%)
 Strand = Plus / Minus

                                                                        
Query: 233  cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
            ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 1031 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 972

                                                                        
Query: 293  cataccggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaact 352
             |||  |||||||||||||||| ||||||||| ||||||| || ||||  | ||  || |
Sbjct: 971  tataatggattcgatagccatgaccaggtaaaaaccactcgaagtctaacttcaacaatt 912

                                                                        
Query: 353  tcctcatgctatccagttgcaaattcactgattgcttgctgtacatccgaaagagattca 412
            | |||||||| ||||| |||||   |||||||||||||||||||||  |||||||||  |
Sbjct: 911  ttctcatgctgtccagctgcaagcccactgattgcttgctgtacataagaaagagatcta 852

                                                                        
Query: 413  gttcgtctgaatattctgattttgcgacatggtcgccagtgaatagtgcctttagcggtt 472
              || || || | |||||||||||| ||||| || |||||||| || |||||||  ||||
Sbjct: 851  aatcatcagattcttctgattttgcaacatgatctccagtgaaaagcgcctttactggtt 792

                                                                        
Query: 473  tgtacaacaagcagaccgatccttcggtgtggcctggggtatggataagttcaaaatcat 532
            |||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| 
Sbjct: 791  tgtagaataagcagactgaaccttcagtatgacctggggtatggataagttcgaaatcag 732

                                                                        
Query: 533  ttccaatgttccagggaccacttccagtaagtttccgctcgacatcagcagtaatgtcca 592
             |||||||| ||| || ||| ||||||||||||||| ||| ||||| |||||||  ||| 
Sbjct: 731  ctccaatgtcccatgggccatttccagtaagtttccactcaacatctgcagtaacatcct 672

                                                                        
Query: 593  ctacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgat 652
            ||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||
Sbjct: 671  ctacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgat 612

                         
Query: 653  ccgctacatcatc 665
            |||| ||||||||
Sbjct: 611  ccgcgacatcatc 599



to top

>ref|XM_468525.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1218

 Score =  266 bits (134), Expect = 9e-68
 Identities = 358/433 (82%)
 Strand = Plus / Minus

                                                                        
Query: 233  cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
            ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 1031 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 972

                                                                        
Query: 293  cataccggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaact 352
             |||  |||||||||||||||| ||||||||| ||||||| || ||||  | ||  || |
Sbjct: 971  tataatggattcgatagccatgaccaggtaaaaaccactcgaagtctaacttcaacaatt 912

                                                                        
Query: 353  tcctcatgctatccagttgcaaattcactgattgcttgctgtacatccgaaagagattca 412
            | |||||||| ||||| |||||   |||||||||||||||||||||  |||||||||  |
Sbjct: 911  ttctcatgctgtccagctgcaagcccactgattgcttgctgtacataagaaagagatcta 852

                                                                        
Query: 413  gttcgtctgaatattctgattttgcgacatggtcgccagtgaatagtgcctttagcggtt 472
              || || || | |||||||||||| ||||| || |||||||| || |||||||  ||||
Sbjct: 851  aatcatcagattcttctgattttgcaacatgatctccagtgaaaagcgcctttactggtt 792

                                                                        
Query: 473  tgtacaacaagcagaccgatccttcggtgtggcctggggtatggataagttcaaaatcat 532
            |||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| 
Sbjct: 791  tgtagaataagcagactgaaccttcagtatgacctggggtatggataagttcgaaatcag 732

                                                                        
Query: 533  ttccaatgttccagggaccacttccagtaagtttccgctcgacatcagcagtaatgtcca 592
             |||||||| ||| || ||| ||||||||||||||| ||| ||||| |||||||  ||| 
Sbjct: 731  ctccaatgtcccatgggccatttccagtaagtttccactcaacatctgcagtaacatcct 672

                                                                        
Query: 593  ctacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgat 652
            ||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||
Sbjct: 671  ctacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgat 612

                         
Query: 653  ccgctacatcatc 665
            |||| ||||||||
Sbjct: 611  ccgcgacatcatc 599



to top

>ref|XM_507553.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2
            mRNA
          Length = 1334

 Score =  266 bits (134), Expect = 9e-68
 Identities = 358/433 (82%)
 Strand = Plus / Minus

                                                                        
Query: 233  cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
            ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 1030 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 971

                                                                        
Query: 293  cataccggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaact 352
             |||  |||||||||||||||| ||||||||| ||||||| || ||||  | ||  || |
Sbjct: 970  tataatggattcgatagccatgaccaggtaaaaaccactcgaagtctaacttcaacaatt 911

                                                                        
Query: 353  tcctcatgctatccagttgcaaattcactgattgcttgctgtacatccgaaagagattca 412
            | |||||||| ||||| |||||   |||||||||||||||||||||  |||||||||  |
Sbjct: 910  ttctcatgctgtccagctgcaagcccactgattgcttgctgtacataagaaagagatcta 851

                                                                        
Query: 413  gttcgtctgaatattctgattttgcgacatggtcgccagtgaatagtgcctttagcggtt 472
              || || || | |||||||||||| ||||| || |||||||| || |||||||  ||||
Sbjct: 850  aatcatcagattcttctgattttgcaacatgatctccagtgaaaagcgcctttactggtt 791

                                                                        
Query: 473  tgtacaacaagcagaccgatccttcggtgtggcctggggtatggataagttcaaaatcat 532
            |||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| 
Sbjct: 790  tgtagaataagcagactgaaccttcagtatgacctggggtatggataagttcgaaatcag 731

                                                                        
Query: 533  ttccaatgttccagggaccacttccagtaagtttccgctcgacatcagcagtaatgtcca 592
             |||||||| ||| || ||| ||||||||||||||| ||| ||||| |||||||  ||| 
Sbjct: 730  ctccaatgtcccatgggccatttccagtaagtttccactcaacatctgcagtaacatcct 671

                                                                        
Query: 593  ctacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgat 652
            ||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||
Sbjct: 670  ctacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgat 611

                         
Query: 653  ccgctacatcatc 665
            |||| ||||||||
Sbjct: 610  ccgcgacatcatc 598



to top

>ref|XM_507067.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2
            mRNA
          Length = 1381

 Score =  266 bits (134), Expect = 9e-68
 Identities = 358/433 (82%)
 Strand = Plus / Minus

                                                                        
Query: 233  cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
            ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 1077 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 1018

                                                                        
Query: 293  cataccggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaact 352
             |||  |||||||||||||||| ||||||||| ||||||| || ||||  | ||  || |
Sbjct: 1017 tataatggattcgatagccatgaccaggtaaaaaccactcgaagtctaacttcaacaatt 958

                                                                        
Query: 353  tcctcatgctatccagttgcaaattcactgattgcttgctgtacatccgaaagagattca 412
            | |||||||| ||||| |||||   |||||||||||||||||||||  |||||||||  |
Sbjct: 957  ttctcatgctgtccagctgcaagcccactgattgcttgctgtacataagaaagagatcta 898

                                                                        
Query: 413  gttcgtctgaatattctgattttgcgacatggtcgccagtgaatagtgcctttagcggtt 472
              || || || | |||||||||||| ||||| || |||||||| || |||||||  ||||
Sbjct: 897  aatcatcagattcttctgattttgcaacatgatctccagtgaaaagcgcctttactggtt 838

                                                                        
Query: 473  tgtacaacaagcagaccgatccttcggtgtggcctggggtatggataagttcaaaatcat 532
            |||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| 
Sbjct: 837  tgtagaataagcagactgaaccttcagtatgacctggggtatggataagttcgaaatcag 778

                                                                        
Query: 533  ttccaatgttccagggaccacttccagtaagtttccgctcgacatcagcagtaatgtcca 592
             |||||||| ||| || ||| ||||||||||||||| ||| ||||| |||||||  ||| 
Sbjct: 777  ctccaatgtcccatgggccatttccagtaagtttccactcaacatctgcagtaacatcct 718

                                                                        
Query: 593  ctacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgat 652
            ||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||
Sbjct: 717  ctacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgat 658

                         
Query: 653  ccgctacatcatc 665
            |||| ||||||||
Sbjct: 657  ccgcgacatcatc 645



to top

>dbj|AK122029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112F11, full
            insert sequence
          Length = 1381

 Score =  266 bits (134), Expect = 9e-68
 Identities = 358/433 (82%)
 Strand = Plus / Minus

                                                                        
Query: 233  cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
            ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 1077 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 1018

                                                                        
Query: 293  cataccggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaact 352
             |||  |||||||||||||||| ||||||||| ||||||| || ||||  | ||  || |
Sbjct: 1017 tataatggattcgatagccatgaccaggtaaaaaccactcgaagtctaacttcaacaatt 958

                                                                        
Query: 353  tcctcatgctatccagttgcaaattcactgattgcttgctgtacatccgaaagagattca 412
            | |||||||| ||||| |||||   |||||||||||||||||||||  |||||||||  |
Sbjct: 957  ttctcatgctgtccagctgcaagcccactgattgcttgctgtacataagaaagagatcta 898

                                                                        
Query: 413  gttcgtctgaatattctgattttgcgacatggtcgccagtgaatagtgcctttagcggtt 472
              || || || | |||||||||||| ||||| || |||||||| || |||||||  ||||
Sbjct: 897  aatcatcagattcttctgattttgcaacatgatctccagtgaaaagcgcctttactggtt 838

                                                                        
Query: 473  tgtacaacaagcagaccgatccttcggtgtggcctggggtatggataagttcaaaatcat 532
            |||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| 
Sbjct: 837  tgtagaataagcagactgaaccttcagtatgacctggggtatggataagttcgaaatcag 778

                                                                        
Query: 533  ttccaatgttccagggaccacttccagtaagtttccgctcgacatcagcagtaatgtcca 592
             |||||||| ||| || ||| ||||||||||||||| ||| ||||| |||||||  ||| 
Sbjct: 777  ctccaatgtcccatgggccatttccagtaagtttccactcaacatctgcagtaacatcct 718

                                                                        
Query: 593  ctacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgat 652
            ||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||
Sbjct: 717  ctacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgat 658

                         
Query: 653  ccgctacatcatc 665
            |||| ||||||||
Sbjct: 657  ccgcgacatcatc 645



to top

>dbj|AK104532.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C07, full
            insert sequence
          Length = 1218

 Score =  266 bits (134), Expect = 9e-68
 Identities = 358/433 (82%)
 Strand = Plus / Minus

                                                                        
Query: 233  cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
            ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 1031 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 972

                                                                        
Query: 293  cataccggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaact 352
             |||  |||||||||||||||| ||||||||| ||||||| || ||||  | ||  || |
Sbjct: 971  tataatggattcgatagccatgaccaggtaaaaaccactcgaagtctaacttcaacaatt 912

                                                                        
Query: 353  tcctcatgctatccagttgcaaattcactgattgcttgctgtacatccgaaagagattca 412
            | |||||||| ||||| |||||   |||||||||||||||||||||  |||||||||  |
Sbjct: 911  ttctcatgctgtccagctgcaagcccactgattgcttgctgtacataagaaagagatcta 852

                                                                        
Query: 413  gttcgtctgaatattctgattttgcgacatggtcgccagtgaatagtgcctttagcggtt 472
              || || || | |||||||||||| ||||| || |||||||| || |||||||  ||||
Sbjct: 851  aatcatcagattcttctgattttgcaacatgatctccagtgaaaagcgcctttactggtt 792

                                                                        
Query: 473  tgtacaacaagcagaccgatccttcggtgtggcctggggtatggataagttcaaaatcat 532
            |||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| 
Sbjct: 791  tgtagaataagcagactgaaccttcagtatgacctggggtatggataagttcgaaatcag 732

                                                                        
Query: 533  ttccaatgttccagggaccacttccagtaagtttccgctcgacatcagcagtaatgtcca 592
             |||||||| ||| || ||| ||||||||||||||| ||| ||||| |||||||  ||| 
Sbjct: 731  ctccaatgtcccatgggccatttccagtaagtttccactcaacatctgcagtaacatcct 672

                                                                        
Query: 593  ctacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgat 652
            ||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||
Sbjct: 671  ctacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgat 612

                         
Query: 653  ccgctacatcatc 665
            |||| ||||||||
Sbjct: 611  ccgcgacatcatc 599



to top

>dbj|AK104364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C11, full
            insert sequence
          Length = 1218

 Score =  266 bits (134), Expect = 9e-68
 Identities = 358/433 (82%)
 Strand = Plus / Minus

                                                                        
Query: 233  cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
            ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 1031 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 972

                                                                        
Query: 293  cataccggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaact 352
             |||  |||||||||||||||| ||||||||| ||||||| || ||||  | ||  || |
Sbjct: 971  tataatggattcgatagccatgaccaggtaaaaaccactcgaagtctaacttcaacaatt 912

                                                                        
Query: 353  tcctcatgctatccagttgcaaattcactgattgcttgctgtacatccgaaagagattca 412
            | |||||||| ||||| |||||   |||||||||||||||||||||  |||||||||  |
Sbjct: 911  ttctcatgctgtccagctgcaagcccactgattgcttgctgtacataagaaagagatcta 852

                                                                        
Query: 413  gttcgtctgaatattctgattttgcgacatggtcgccagtgaatagtgcctttagcggtt 472
              || || || | |||||||||||| ||||| || |||||||| || |||||||  ||||
Sbjct: 851  aatcatcagattcttctgattttgcaacatgatctccagtgaaaagcgcctttactggtt 792

                                                                        
Query: 473  tgtacaacaagcagaccgatccttcggtgtggcctggggtatggataagttcaaaatcat 532
            |||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| 
Sbjct: 791  tgtagaataagcagactgaaccttcagtatgacctggggtatggataagttcgaaatcag 732

                                                                        
Query: 533  ttccaatgttccagggaccacttccagtaagtttccgctcgacatcagcagtaatgtcca 592
             |||||||| ||| || ||| ||||||||||||||| ||| ||||| |||||||  ||| 
Sbjct: 731  ctccaatgtcccatgggccatttccagtaagtttccactcaacatctgcagtaacatcct 672

                                                                        
Query: 593  ctacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgat 652
            ||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||
Sbjct: 671  ctacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgat 612

                         
Query: 653  ccgctacatcatc 665
            |||| ||||||||
Sbjct: 611  ccgcgacatcatc 599



to top

>dbj|AK065244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I14, full
           insert sequence
          Length = 1142

 Score =  266 bits (134), Expect = 9e-68
 Identities = 358/433 (82%)
 Strand = Plus / Minus

                                                                       
Query: 233 cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
           ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 957 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 898

                                                                       
Query: 293 cataccggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaact 352
            |||  |||||||||||||||| ||||||||| ||||||| || ||||  | ||  || |
Sbjct: 897 tataatggattcgatagccatgaccaggtaaaaaccactcgaagtctaacttcaacaatt 838

                                                                       
Query: 353 tcctcatgctatccagttgcaaattcactgattgcttgctgtacatccgaaagagattca 412
           | |||||||| ||||| |||||   |||||||||||||||||||||  |||||||||  |
Sbjct: 837 ttctcatgctgtccagctgcaagcccactgattgcttgctgtacataagaaagagatcta 778

                                                                       
Query: 413 gttcgtctgaatattctgattttgcgacatggtcgccagtgaatagtgcctttagcggtt 472
             || || || | |||||||||||| ||||| || |||||||| || |||||||  ||||
Sbjct: 777 aatcatcagattcttctgattttgcaacatgatctccagtgaaaagcgcctttactggtt 718

                                                                       
Query: 473 tgtacaacaagcagaccgatccttcggtgtggcctggggtatggataagttcaaaatcat 532
           |||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| 
Sbjct: 717 tgtagaataagcagactgaaccttcagtatgacctggggtatggataagttcgaaatcag 658

                                                                       
Query: 533 ttccaatgttccagggaccacttccagtaagtttccgctcgacatcagcagtaatgtcca 592
            |||||||| ||| || ||| ||||||||||||||| ||| ||||| |||||||  ||| 
Sbjct: 657 ctccaatgtcccatgggccatttccagtaagtttccactcaacatctgcagtaacatcct 598

                                                                       
Query: 593 ctacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgat 652
           ||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||
Sbjct: 597 ctacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgat 538

                        
Query: 653 ccgctacatcatc 665
           |||| ||||||||
Sbjct: 537 ccgcgacatcatc 525



to top

>dbj|AK064830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F10, full
            insert sequence
          Length = 1335

 Score =  266 bits (134), Expect = 9e-68
 Identities = 358/433 (82%)
 Strand = Plus / Minus

                                                                        
Query: 233  cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
            ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 1030 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 971

                                                                        
Query: 293  cataccggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaact 352
             |||  |||||||||||||||| ||||||||| ||||||| || ||||  | ||  || |
Sbjct: 970  tataatggattcgatagccatgaccaggtaaaaaccactcgaagtctaacttcaacaatt 911

                                                                        
Query: 353  tcctcatgctatccagttgcaaattcactgattgcttgctgtacatccgaaagagattca 412
            | |||||||| ||||| |||||   |||||||||||||||||||||  |||||||||  |
Sbjct: 910  ttctcatgctgtccagctgcaagcccactgattgcttgctgtacataagaaagagatcta 851

                                                                        
Query: 413  gttcgtctgaatattctgattttgcgacatggtcgccagtgaatagtgcctttagcggtt 472
              || || || | |||||||||||| ||||| || |||||||| || |||||||  ||||
Sbjct: 850  aatcatcagattcttctgattttgcaacatgatctccagtgaaaagcgcctttactggtt 791

                                                                        
Query: 473  tgtacaacaagcagaccgatccttcggtgtggcctggggtatggataagttcaaaatcat 532
            |||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| 
Sbjct: 790  tgtagaataagcagactgaaccttcagtatgacctggggtatggataagttcgaaatcag 731

                                                                        
Query: 533  ttccaatgttccagggaccacttccagtaagtttccgctcgacatcagcagtaatgtcca 592
             |||||||| ||| || ||| ||||||||||||||| ||| ||||| |||||||  ||| 
Sbjct: 730  ctccaatgtcccatgggccatttccagtaagtttccactcaacatctgcagtaacatcct 671

                                                                        
Query: 593  ctacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgat 652
            ||||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | |||||
Sbjct: 670  ctacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgat 611

                         
Query: 653  ccgctacatcatc 665
            |||| ||||||||
Sbjct: 610  ccgcgacatcatc 598



to top

>dbj|AK065885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045A06, full
            insert sequence
          Length = 3391

 Score =  222 bits (112), Expect = 1e-54
 Identities = 303/367 (82%)
 Strand = Plus / Minus

                                                                        
Query: 299  ggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaacttcctca 358
            |||||||||||||||| ||||||||| ||||||| || ||||  | ||  || || ||||
Sbjct: 3072 ggattcgatagccatgtccaggtaaaaaccactcgaagtctaacttcaacaattttctca 3013

                                                                        
Query: 359  tgctatccagttgcaaattcactgattgcttgctgtacatccgaaagagattcagttcgt 418
            |||| |||||||||||  |||||| |||| ||||||||||  |||||||||  |  || |
Sbjct: 3012 tgctgtccagttgcaagctcactggttgcctgctgtacataagaaagagatataaatcat 2953

                                                                        
Query: 419  ctgaatattctgattttgcgacatggtcgccagtgaatagtgcctttagcggtttgtaca 478
            | || | |||||||||||| || || || |||||||| || |||||||  |||||||| |
Sbjct: 2952 cagattcttctgattttgcaacgtgatctccagtgaaaagcgcctttactggtttgtaga 2893

                                                                        
Query: 479  acaagcagaccgatccttcggtgtggcctggggtatggataagttcaaaatcatttccaa 538
            ||||||||||||| |||| ||| ||||| ||||||||||||||||| ||||||  |||||
Sbjct: 2892 acaagcagaccgaaccttgggtatggccaggggtatggataagttcgaaatcagctccaa 2833

                                                                        
Query: 539  tgttccagggaccacttccagtaagtttccgctcgacatcagcagtaatgtccactacat 598
            ||||||| |||||| | ||||||||||||||||| |||||  | |||     | ||||||
Sbjct: 2832 tgttccaaggaccattgccagtaagtttccgctcaacatctacggtagcacgctctacat 2773

                                                                        
Query: 599  ctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgatccgcta 658
            | || |||||||| || ||||| ||||| ||||||||||||||||| | |||||| ||||
Sbjct: 2772 cgcccgaatggataatcctctcacattttagccgctcagcccacttcctatgatctgcta 2713

                   
Query: 659  catcatc 665
            |||||||
Sbjct: 2712 catcatc 2706



to top

>gb|AY112293.1| Zea mays CL19799_1 mRNA sequence
          Length = 644

 Score =  147 bits (74), Expect = 5e-32
 Identities = 223/273 (81%)
 Strand = Plus / Plus

                                                                       
Query: 394 tacatccgaaagagattcagttcgtctgaatattctgattttgcgacatggtcgccagtg 453
           |||||| ||||||| ||||| |||||||| | |||||| ||||| |||||||| ||||||
Sbjct: 341 tacatcagaaagaggttcagatcgtctgattcttctgactttgcaacatggtctccagtg 400

                                                                       
Query: 454 aatagtgcctttagcggtttgtacaacaagcagaccgatccttcggtgtggcctggggta 513
           || ||  |||||||||||||| |  ||||||| || || |||  ||| |||||||| |||
Sbjct: 401 aacagcacctttagcggtttgaagtacaagcacactgagcctggggtatggcctggcgta 460

                                                                       
Query: 514 tggataagttcaaaatcatttccaatgttccagggaccacttccagtaagtttccgctcg 573
           |||||||||||||||||  |||| | |||||| |||||| ||||   |||||||| ||| 
Sbjct: 461 tggataagttcaaaatctgttcctaagttccatggaccatttccttcaagtttccactca 520

                                                                       
Query: 574 acatcagcagtaatgtccactacatctcctgaatggatgattctctcgcatttcagccgc 633
           ||||| || |||   ||| | |||||||||||||| || ||||| || ||||| ||| ||
Sbjct: 521 acatctgcggtagcctcctccacatctcctgaatgtattattctttcacattttagctgc 580

                                            
Query: 634 tcagcccacttncgatgatccgctacatcatca 666
           ||||||||||| |  ||||| ||||| ||||||
Sbjct: 581 tcagcccacttcctgtgatctgctacgtcatca 613



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 111/136 (81%)
 Strand = Plus / Plus

                                                                       
Query: 233 cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
           ||||| || |||| ||||||||||| ||||| || ||| |||| |||||| | || ||||
Sbjct: 180 cctagcttgtgtaattagctaggagggactccatggctacattcttggcacgcacatctt 239

                                                                       
Query: 293 cataccggattcgatagccatgcccaggtaaataccactcaaaatctaggtccattaact 352
             |||  ||||||||||||||| |||||||||  |||||| || ||||| |||| || ||
Sbjct: 240 tgtacttgattcgatagccatgtccaggtaaaagccactcgaactctagctccagtagct 299

                           
Query: 353 tcctcatgctatccag 368
           |||| ||||| |||||
Sbjct: 300 tcctgatgctttccag 315



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                            
Query: 502      tggcctggggtatggataagttcaaaatcatttccaatgttccagggaccacttccagta 561
                ||||| ||||||||||||||||| ||||||  |||||||||||| |||||| | ||||||
Sbjct: 35684392 tggccaggggtatggataagttcgaaatcagctccaatgttccaaggaccattgccagta 35684451

                                 
Query: 562      agtttccgctcgacatc 578
                ||||||||||| |||||
Sbjct: 35684452 agtttccgctcaacatc 35684468



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                            
Query: 505      cctggggtatggataagttcaaaatcatttccaatgttccagggaccacttccagtaagt 564
                |||||||||||||||||||| ||||||  |||||||| ||| || ||| |||||||||||
Sbjct: 35680281 cctggggtatggataagttcgaaatcagctccaatgtcccatgggccatttccagtaagt 35680340

                                      
Query: 565      ttccgctcgacatcagcagtaa 586
                |||| ||| ||||| |||||||
Sbjct: 35680341 ttccactcaacatctgcagtaa 35680362



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                            
Query: 594      tacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgatc 653
                |||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | ||||||
Sbjct: 35680664 tacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgatc 35680723

                            
Query: 654      cgctacatcatc 665
                ||| ||||||||
Sbjct: 35680724 cgcgacatcatc 35680735



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                            
Query: 594      tacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgatc 653
                |||||| || |||||||| || ||||| ||||| ||||||||||||||||| | ||||||
Sbjct: 35684684 tacatcgcccgaatggataatcctctcacattttagccgctcagcccacttcctatgatc 35684743

                            
Query: 654      cgctacatcatc 665
                 |||||||||||
Sbjct: 35684744 tgctacatcatc 35684755



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 90/109 (82%)
 Strand = Plus / Plus

                                                                            
Query: 380      ctgattgcttgctgtacatccgaaagagattcagttcgtctgaatattctgattttgcga 439
                |||||||||||||||||||  |||||||||  |  || || || | |||||||||||| |
Sbjct: 35679824 ctgattgcttgctgtacataagaaagagatctaaatcatcagattcttctgattttgcaa 35679883

                                                                 
Query: 440      catggtcgccagtgaatagtgcctttagcggtttgtacaacaagcagac 488
                |||| || |||||||| || |||||||  |||||||| || ||||||||
Sbjct: 35679884 catgatctccagtgaaaagcgcctttactggtttgtagaataagcagac 35679932



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                            
Query: 426      ttctgattttgcgacatggtcgccagtgaatagtgcctttagcggtttgtacaacaagca 485
                |||||||||||| || || || |||||||| || |||||||  |||||||| ||||||||
Sbjct: 35684114 ttctgattttgcaacgtgatctccagtgaaaagcgcctttactggtttgtagaacaagca 35684173

                      
Query: 486      gaccga 491
                ||||||
Sbjct: 35684174 gaccga 35684179



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                            
Query: 233      cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
                ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 35679455 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 35679514

                                      
Query: 293      cataccggattcgatagccatg 314
                 |||  ||||||||||||||||
Sbjct: 35679515 tataatggattcgatagccatg 35679536



to top

>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_D06
          Length = 102239

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                         
Query: 502   tggcctggggtatggataagttcaaaatcatttccaatgttccagggaccacttccagta 561
             ||||| ||||||||||||||||| ||||||  |||||||||||| |||||| | ||||||
Sbjct: 45006 tggccaggggtatggataagttcgaaatcagctccaatgttccaaggaccattgccagta 45065

                              
Query: 562   agtttccgctcgacatc 578
             ||||||||||| |||||
Sbjct: 45066 agtttccgctcaacatc 45082



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                         
Query: 505   cctggggtatggataagttcaaaatcatttccaatgttccagggaccacttccagtaagt 564
             |||||||||||||||||||| ||||||  |||||||| ||| || ||| |||||||||||
Sbjct: 40895 cctggggtatggataagttcgaaatcagctccaatgtcccatgggccatttccagtaagt 40954

                                   
Query: 565   ttccgctcgacatcagcagtaa 586
             |||| ||| ||||| |||||||
Sbjct: 40955 ttccactcaacatctgcagtaa 40976



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                         
Query: 594   tacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgatc 653
             |||||| || ||||||||||| ||||| ||||| ||||||||||||||||| | ||||||
Sbjct: 41278 tacatcgcccgaatggatgatcctctcacattttagccgctcagcccacttcctatgatc 41337

                         
Query: 654   cgctacatcatc 665
             ||| ||||||||
Sbjct: 41338 cgcgacatcatc 41349



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                         
Query: 594   tacatctcctgaatggatgattctctcgcatttcagccgctcagcccacttncgatgatc 653
             |||||| || |||||||| || ||||| ||||| ||||||||||||||||| | ||||||
Sbjct: 45298 tacatcgcccgaatggataatcctctcacattttagccgctcagcccacttcctatgatc 45357

                         
Query: 654   cgctacatcatc 665
              |||||||||||
Sbjct: 45358 tgctacatcatc 45369



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 90/109 (82%)
 Strand = Plus / Plus

                                                                         
Query: 380   ctgattgcttgctgtacatccgaaagagattcagttcgtctgaatattctgattttgcga 439
             |||||||||||||||||||  |||||||||  |  || || || | |||||||||||| |
Sbjct: 40438 ctgattgcttgctgtacataagaaagagatctaaatcatcagattcttctgattttgcaa 40497

                                                              
Query: 440   catggtcgccagtgaatagtgcctttagcggtttgtacaacaagcagac 488
             |||| || |||||||| || |||||||  |||||||| || ||||||||
Sbjct: 40498 catgatctccagtgaaaagcgcctttactggtttgtagaataagcagac 40546



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 426   ttctgattttgcgacatggtcgccagtgaatagtgcctttagcggtttgtacaacaagca 485
             |||||||||||| || || || |||||||| || |||||||  |||||||| ||||||||
Sbjct: 44728 ttctgattttgcaacgtgatctccagtgaaaagcgcctttactggtttgtagaacaagca 44787

                   
Query: 486   gaccga 491
             ||||||
Sbjct: 44788 gaccga 44793



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                         
Query: 233   cctagtttttgtagttagctaggagagactcaatagctgcatttttggcatgtacgtctt 292
             ||||| || |||||||||||| ||| ||||| || |||| ||  || ||| |||||||||
Sbjct: 40069 cctagcttgtgtagttagctatgagggactcgattgctgaatccttagcacgtacgtctt 40128

                                   
Query: 293   cataccggattcgatagccatg 314
              |||  ||||||||||||||||
Sbjct: 40129 tataatggattcgatagccatg 40150



to top

>ref|NM_119509.3| Arabidopsis thaliana catalytic AT4G33540 mRNA, complete cds
          Length = 1359

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 439 acatggtcgccagtgaatagtgcctt 464
           ||||||||||||||||||| ||||||
Sbjct: 842 acatggtcgccagtgaataatgcctt 817



to top

>emb|X77921.1|EAAMASL E.amylovara (Ea7/74) ams- A, B, C, D, E, F, G, H, I, J, K and L genes
          Length = 17013

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 370  tgcaaattcactgattgcttgc 391
            ||||||||||||||||||||||
Sbjct: 8590 tgcaaattcactgattgcttgc 8611



to top

>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79
          Length = 199536

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 439    acatggtcgccagtgaatagtgcctt 464
              ||||||||||||||||||| ||||||
Sbjct: 161350 acatggtcgccagtgaataatgcctt 161325



to top

>emb|AL031394.1|ATT16L1 Arabidopsis thaliana DNA chromosome 4, BAC clone T16L1 (ESSAII project)
          Length = 98124

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 439   acatggtcgccagtgaatagtgcctt 464
             ||||||||||||||||||| ||||||
Sbjct: 14032 acatggtcgccagtgaataatgcctt 14007



to top

>gb|AY093148.1| Arabidopsis thaliana putative protein (At4g33540) mRNA, complete
           cds
          Length = 1265

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 439 acatggtcgccagtgaatagtgcctt 464
           ||||||||||||||||||| ||||||
Sbjct: 842 acatggtcgccagtgaataatgcctt 817



to top

>dbj|AK054078.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN
            full-length enriched library, clone:E230016N01
            product:unclassifiable, full insert sequence
          Length = 2950

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 193  tggaatccttatttgggaagta 214
            ||||||||||||||||||||||
Sbjct: 2154 tggaatccttatttgggaagta 2133



to top

>emb|BX827444.1|CNS0A2SJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS55ZD11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1272

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 439 acatggtcgccagtgaatagtgcctt 464
           ||||||||||||||||||| ||||||
Sbjct: 874 acatggtcgccagtgaataatgcctt 849



to top

>gb|BT003391.1| Arabidopsis thaliana putative protein (At4g33540) mRNA, complete
           cds
          Length = 1141

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 439 acatggtcgccagtgaatagtgcctt 464
           ||||||||||||||||||| ||||||
Sbjct: 833 acatggtcgccagtgaataatgcctt 808



to top

>gb|BC082552.1| Mus musculus RIKEN cDNA A230063L24 gene, mRNA (cDNA clone
            IMAGE:30621913)
          Length = 7683

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 193  tggaatccttatttgggaagta 214
            ||||||||||||||||||||||
Sbjct: 6957 tggaatccttatttgggaagta 6936



to top

>gb|AC171917.14| Mus musculus chromosome 8, clone RP23-390K13, complete sequence
          Length = 217234

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 193   tggaatccttatttgggaagta 214
             ||||||||||||||||||||||
Sbjct: 68992 tggaatccttatttgggaagta 68971



to top

>gb|AC084567.1|CBRG36N05 Caenorhabditis briggsae cosmid G36N05, complete sequence
          Length = 23868

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 604  gaatggatgattctctcgcat 624
            |||||||||||||||||||||
Sbjct: 5112 gaatggatgattctctcgcat 5092



to top

>gb|AC170189.2| Mus musculus BAC clone RP23-103L12 from chromosome 3, complete sequence
          Length = 204731

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 517   ataagttcaaaatcatttcc 536
             ||||||||||||||||||||
Sbjct: 18937 ataagttcaaaatcatttcc 18918



to top

>gb|AC124226.12| Mus musculus chromosome 15, clone RP23-94G21, complete sequence
          Length = 189787

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 320    gtaaataccactcaaaatctaggtccat 347
              |||||||||||||| |||||||| ||||
Sbjct: 134756 gtaaataccactcacaatctaggaccat 134729



to top

>gb|AC139572.4| Mus musculus BAC clone RP24-196P9 from chromosome 7, complete sequence
          Length = 165198

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    acttgatataagcatgccca 48
             ||||||||||||||||||||
Sbjct: 89197 acttgatataagcatgccca 89216



to top

>gb|AC122934.2| Mus musculus BAC clone RP23-19A13 from 3, complete sequence
          Length = 189627

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 517    ataagttcaaaatcatttcc 536
              ||||||||||||||||||||
Sbjct: 126409 ataagttcaaaatcatttcc 126390



to top

>emb|BX324210.12| Zebrafish DNA sequence from clone DKEY-20I20 in linkage group 22,
             complete sequence
          Length = 230738

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 585   aatgtccactacatctcctgaatg 608
             ||||||||| ||||||||||||||
Sbjct: 16192 aatgtccacaacatctcctgaatg 16215



to top

>emb|BX936372.3| Mouse DNA sequence from clone RP23-94O16 on chromosome 4 Contains the
             5' end of a novel transcript, complete sequence
          Length = 79017

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    ttgatataagcattagcata 108
             ||||||||||||||||||||
Sbjct: 37169 ttgatataagcattagcata 37188



to top

>gb|AC015802.21| Homo sapiens chromosome 17, clone RP11-666A8, complete sequence
          Length = 205753

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    cctggtccctttattctgga 196
              ||||||||||||||||||||
Sbjct: 110313 cctggtccctttattctgga 110332



to top

>emb|BX323806.15| Zebrafish DNA sequence from clone DKEYP-123A9 in linkage group 19,
              complete sequence
          Length = 132427

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 416    cgtctgaatattctgatttt 435
              ||||||||||||||||||||
Sbjct: 130094 cgtctgaatattctgatttt 130113



to top

>emb|BX004966.12| Zebrafish DNA sequence from clone DKEY-5E12 in linkage group 19, complete
              sequence
          Length = 134336

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 416    cgtctgaatattctgatttt 435
              ||||||||||||||||||||
Sbjct: 132003 cgtctgaatattctgatttt 132022



to top

>emb|CT025522.17| Mouse DNA sequence from clone RP23-332L23 on chromosome 16, complete
              sequence
          Length = 199628

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 519    aagttcaaaatcatttccaa 538
              ||||||||||||||||||||
Sbjct: 182280 aagttcaaaatcatttccaa 182261



to top

>gb|AC167563.3| Mus musculus BAC clone RP24-392I11 from chromosome 16, complete sequence
          Length = 201682

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 519    aagttcaaaatcatttccaa 538
              ||||||||||||||||||||
Sbjct: 145568 aagttcaaaatcatttccaa 145587



to top

>emb|AL928787.4| Mouse DNA sequence from clone RP23-435B11 on chromosome 4, complete
             sequence
          Length = 67487

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    ttgatataagcattagcata 108
             ||||||||||||||||||||
Sbjct: 17330 ttgatataagcattagcata 17349



to top

>gb|AC005899.1|AC005899 Homo sapiens chromosome 17, clone  hRPK.227_G_15, complete sequence
          Length = 183827

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     gcccaacccttatacatctt 63
              ||||||||||||||||||||
Sbjct: 111083 gcccaacccttatacatctt 111102


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,092,319
Number of Sequences: 3902068
Number of extensions: 5092319
Number of successful extensions: 92030
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91927
Number of HSP's gapped (non-prelim): 91
length of query: 666
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 643
effective length of database: 17,143,297,704
effective search space: 11023140423672
effective search space used: 11023140423672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top