ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19m03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AP2M_DICDI (P54672) AP-2 complex subunit mu (Clathrin coat assem... 84 4e-17
2AP1M_CAEEL (P35602) AP-1 complex subunit mu (Clathrin coat assem... 75 2e-13
3AP2M_CAEEL (P35603) AP-2 complex subunit mu (Clathrin coat assem... 73 6e-13
4AP2M1_RAT (P84092) AP-2 complex subunit mu-1 (Adaptin mu-1) (AP-... 72 2e-12
5AP2M1_MOUSE (P84091) AP-2 complex subunit mu-1 (Adaptin mu-1) (A... 72 2e-12
6AP2M1_HUMAN (Q96CW1) AP-2 complex subunit mu-1 (Adaptin mu-1) (A... 72 2e-12
7AP1M2_HUMAN (Q9Y6Q5) AP-1 complex subunit mu-2 (Adaptor-related ... 72 2e-12
8AP1M2_MOUSE (Q9WVP1) AP-1 complex subunit mu-2 (Adaptor-related ... 71 3e-12
9AP1M1_MOUSE (P35585) AP-1 complex subunit mu-1 (Adaptor-related ... 69 9e-12
10AP1M1_HUMAN (Q9BXS5) AP-1 complex subunit mu-1 (Adaptor-related ... 69 9e-12
11AP2M_SCHPO (Q09718) AP-2 complex subunit mu (Probable clathrin c... 65 2e-10
12AP2M_YEAST (Q99186) AP-2 complex subunit mu (Clathrin coat assem... 57 5e-08
13AP1M1_SCHPO (Q9HFE5) AP-1 complex subunit mu-1 (Mu(1)-adaptin) (... 55 1e-07
14AP1M1_YEAST (Q00776) AP-1 complex subunit mu-1 (Mu(1)-adaptin) (... 54 4e-07
15AP1M_DISOM (P47795) AP-1 complex subunit mu (Clathrin coat assem... 39 0.010
16AP4M1_MOUSE (Q9JKC7) AP-4 complex subunit mu-1 (Adapter-related ... 39 0.017
17AP4M1_RAT (Q2PWT8) AP-4 complex subunit mu-1 (Adapter-related pr... 39 0.017
18AP4M1_HUMAN (O00189) AP-4 complex subunit mu-1 (Adapter-related ... 39 0.017
19AP3M2_RAT (P53678) AP-3 complex subunit mu-2 (Adapter-related pr... 37 0.039
20AP3M2_MOUSE (Q8R2R9) AP-3 complex subunit mu-2 (Adapter-related ... 37 0.039
21APM2_YEAST (P38700) Adaptin medium chain homolog APM2 37 0.051
22AP3M2_HUMAN (P53677) AP-3 complex subunit mu-2 (Adapter-related ... 37 0.051
23AP3M1_RAT (P53676) AP-3 complex subunit mu-1 (Adapter-related pr... 37 0.051
24AP3M1_HUMAN (Q9Y2T2) AP-3 complex subunit mu-1 (Adapter-related ... 37 0.051
25AP3M1_MOUSE (Q9JKC8) AP-3 complex subunit mu-1 (Adapter-related ... 37 0.066
26GALT6_CAEEL (O61394) Probable N-acetylgalactosaminyltransferase ... 30 4.8
27WBS14_CAEEL (P41846) WBSCR14 protein homolog (Mlx interactor) 30 4.8
28ACRBP_HUMAN (Q8NEB7) Acrosin-binding protein precursor (Proacros... 30 8.1
29AMPL3_ARATH (Q944P7) Leucine aminopeptidase 3, chloroplast precu... 30 8.1

>AP2M_DICDI (P54672) AP-2 complex subunit mu (Clathrin coat assembly protein|
           AP50) (Clathrin coat-associated protein AP50) (Plasma
           membrane adaptor AP-2 50 kDa protein) (Clathrin assembly
           protein complex 2 medium chain)
          Length = 439

 Score = 84.0 bits (206), Expect(2) = 4e-17
 Identities = 41/66 (62%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
 Frame = -2

Query: 606 AEVELISTMG-EKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRA 430
           AEVEL++++  +KK  +RPPI MEFQV MFTASG  VRFLKV EKS Y  ++WVRY+T+A
Sbjct: 373 AEVELMASVNLDKKAWSRPPISMEFQVTMFTASGFSVRFLKVVEKSNYTPIKWVRYLTKA 432

Query: 429 GSYEIR 412
           G+Y+ R
Sbjct: 433 GTYQNR 438



 Score = 23.5 bits (49), Expect(2) = 4e-17
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -1

Query: 649 KIRKFPGQTEATMK 608
           +IR+FPG TE T++
Sbjct: 359 RIRRFPGDTEFTLR 372



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>AP1M_CAEEL (P35602) AP-1 complex subunit mu (Clathrin coat assembly protein|
           AP47) (Clathrin coat-associated protein AP47) (Golgi
           adaptor AP-1 47 kDa protein) (HA1 47 kDa subunit)
           (Clathrin assembly protein assembly protein complex 1
           medium chain) (Uncoor
          Length = 422

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 34/66 (51%), Positives = 49/66 (74%)
 Frame = -2

Query: 609 SAEVELISTMGEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRA 430
           +A + L S M E+    RPPI+++F++P FT SG++VR+LK+ EKSGY  + WVRYIT+ 
Sbjct: 356 TAHLSLPSVMSEES-EGRPPIKVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQN 414

Query: 429 GSYEIR 412
           G YE+R
Sbjct: 415 GEYEMR 420



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>AP2M_CAEEL (P35603) AP-2 complex subunit mu (Clathrin coat assembly protein|
           AP50) (Clathrin coat-associated protein AP50) (Plasma
           membrane adaptor AP-2 50 kDa protein) (Clathrin assembly
           protein complex 2 medium chain) (Dumpy protein 23)
          Length = 441

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
 Frame = -2

Query: 609 SAEVELISTMG-EKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEK----SGYNTVEWVR 445
           SAE++L+ST   EKK  NRPP+ M F+VP F  SGL+VR+LKV+E     S ++ ++WVR
Sbjct: 371 SAEIDLLSTGNVEKKKWNRPPVSMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVR 429

Query: 444 YITRAGSYEIRC 409
           YI R+G YE RC
Sbjct: 430 YIGRSGLYETRC 441



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>AP2M1_RAT (P84092) AP-2 complex subunit mu-1 (Adaptin mu-1) (AP-2 mu-2 chain)|
           (Clathrin coat assembly protein AP50) (Clathrin
           coat-associated protein AP50) (Plasma membrane adaptor
           AP-2 50 kDa protein) (Clathrin assembly protein complex
           2 medium chain)
          Length = 435

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
 Frame = -2

Query: 609 SAEVELISTMGEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEK----SGYNTVEWVRY 442
           SAE+EL+ T  +KK A RPPI M F+VP F  SGL+VR+LKV+E     S ++ ++WVRY
Sbjct: 367 SAEIELLPTNDKKKWA-RPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRY 424

Query: 441 ITRAGSYEIRC 409
           I R+G YE RC
Sbjct: 425 IGRSGIYETRC 435



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>AP2M1_MOUSE (P84091) AP-2 complex subunit mu-1 (Adaptin mu-1) (AP-2 mu-2 chain)|
           (Clathrin coat assembly protein AP50) (Clathrin
           coat-associated protein AP50) (Plasma membrane adaptor
           AP-2 50 kDa protein) (Clathrin assembly protein complex
           2 medium chain)
          Length = 435

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
 Frame = -2

Query: 609 SAEVELISTMGEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEK----SGYNTVEWVRY 442
           SAE+EL+ T  +KK A RPPI M F+VP F  SGL+VR+LKV+E     S ++ ++WVRY
Sbjct: 367 SAEIELLPTNDKKKWA-RPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRY 424

Query: 441 ITRAGSYEIRC 409
           I R+G YE RC
Sbjct: 425 IGRSGIYETRC 435



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>AP2M1_HUMAN (Q96CW1) AP-2 complex subunit mu-1 (Adaptin mu-1) (AP-2 mu-2 chain)|
           (Clathrin coat assembly protein AP50) (Clathrin
           coat-associated protein AP50) (Plasma membrane adaptor
           AP-2 50 kDa protein) (HA2 50 kDa subunit) (Clathrin
           assembly protein co
          Length = 435

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
 Frame = -2

Query: 609 SAEVELISTMGEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEK----SGYNTVEWVRY 442
           SAE+EL+ T  +KK A RPPI M F+VP F  SGL+VR+LKV+E     S ++ ++WVRY
Sbjct: 367 SAEIELLPTNDKKKWA-RPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRY 424

Query: 441 ITRAGSYEIRC 409
           I R+G YE RC
Sbjct: 425 IGRSGIYETRC 435



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>AP1M2_HUMAN (Q9Y6Q5) AP-1 complex subunit mu-2 (Adaptor-related protein complex|
           1 mu-2 subunit) (Mu-adaptin 2) (Adaptor protein complex
           AP-1 mu-2 subunit) (Golgi adaptor HA1/AP1 adaptin mu-2
           subunit) (Clathrin assembly protein assembly protein
           complex 1
          Length = 423

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 27/60 (45%), Positives = 48/60 (80%)
 Frame = -2

Query: 591 ISTMGEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 412
           + ++ ++++  RPPI ++F++P FT SG++VR++K+ EKSGY  + WVRYIT++G Y++R
Sbjct: 362 LPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLR 421



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>AP1M2_MOUSE (Q9WVP1) AP-1 complex subunit mu-2 (Adaptor-related protein complex|
           1 mu-2 subunit) (Mu-adaptin 2) (Adaptor protein complex
           AP-1 mu-2 subunit) (Golgi adaptor HA1/AP1 adaptin mu-2
           subunit) (Clathrin assembly protein assembly protein
           complex 1
          Length = 423

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 27/54 (50%), Positives = 44/54 (81%)
 Frame = -2

Query: 573 KKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 412
           +++  RPPI ++F++P FT SG++VR++K+ EKSGY  + WVRYIT++G Y++R
Sbjct: 368 EEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLR 421



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>AP1M1_MOUSE (P35585) AP-1 complex subunit mu-1 (Adaptor-related protein complex|
           1 mu-1 subunit) (Mu-adaptin 1) (Adaptor protein complex
           AP-1 mu-1 subunit) (Golgi adaptor HA1/AP1 adaptin mu-1
           subunit) (Clathrin assembly protein assembly protein
           complex 1
          Length = 422

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 27/49 (55%), Positives = 40/49 (81%)
 Frame = -2

Query: 558 RPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 412
           +PPI ++F++P FT SG++VR+LK+ EKSGY  + WVRYIT+ G Y++R
Sbjct: 372 KPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 420



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>AP1M1_HUMAN (Q9BXS5) AP-1 complex subunit mu-1 (Adaptor-related protein complex|
           1 mu-1 subunit) (Mu-adaptin 1) (Adaptor protein complex
           AP-1 mu-1 subunit) (Golgi adaptor HA1/AP1 adaptin mu-1
           subunit) (Clathrin assembly protein assembly protein
           complex 1
          Length = 422

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 27/49 (55%), Positives = 40/49 (81%)
 Frame = -2

Query: 558 RPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 412
           +PPI ++F++P FT SG++VR+LK+ EKSGY  + WVRYIT+ G Y++R
Sbjct: 372 KPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 420



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>AP2M_SCHPO (Q09718) AP-2 complex subunit mu (Probable clathrin coat assembly|
           protein AP50) (Clathrin coat-associated protein AP50)
           (Plasma membrane adaptor AP-2 50 kDa protein) (Clathrin
           assembly protein complex 2 medium chain)
          Length = 446

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 34/67 (50%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
 Frame = -2

Query: 606 AEVELISTMGEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSG--YNTVEWVRYITR 433
           AEVEL +T  ++  A +PPI ++F + MFT+SGL V++L+V E S   Y +++WVRY TR
Sbjct: 380 AEVELSNTTNQQIWA-KPPISLDFNILMFTSSGLHVQYLRVSEPSNSKYKSIKWVRYSTR 438

Query: 432 AGSYEIR 412
           AG+ EIR
Sbjct: 439 AGTCEIR 445



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>AP2M_YEAST (Q99186) AP-2 complex subunit mu (Clathrin coat assembly protein|
           AP50) (Clathrin coat-associated protein AP50) (Plasma
           membrane adaptor AP-2 50 kDa protein) (Clathrin assembly
           protein complex 2 medium chain) (Adaptin medium chain
           APM4)
          Length = 491

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = -2

Query: 558 RPPIQMEFQVPMFTASGLRVRFLKVWEK-SGYNTVEWVRYITRAGSYEIR 412
           RPPI +EF+V MF+ SGL VR+  +  K S +  V+W++YI++AGSYE+R
Sbjct: 441 RPPISLEFEVMMFSNSGLVVRYFTISGKDSKHRAVKWIKYISKAGSYEVR 490



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>AP1M1_SCHPO (Q9HFE5) AP-1 complex subunit mu-1 (Mu(1)-adaptin) (Clathrin|
           assembly protein complex 1 medium chain)
          Length = 426

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
 Frame = -2

Query: 606 AEVELISTMGEK-KLANRPPIQMEFQVPMFTASGLRVRFLKVWE-KSGYNTVEWVRYITR 433
           AE+ L S   E  ++  + P+Q++F +P FT SG++VR+LK+ E K  Y+ + WVRY+T+
Sbjct: 358 AEMGLPSVKNEDIQVQKKRPVQLKFAIPYFTTSGIQVRYLKITEPKLNYHAMPWVRYVTQ 417

Query: 432 AGS-YEIR 412
            G+ Y IR
Sbjct: 418 NGTEYSIR 425



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>AP1M1_YEAST (Q00776) AP-1 complex subunit mu-1 (Mu(1)-adaptin) (Clathrin|
           assembly protein complex 1 medium chain) (Clathrin coat
           assembly protein AP54) (Clathrin coat-associated protein
           AP54) (Golgi adaptor AP-1 54 kDa protein) (HA1 54 kDa
           subunit)
          Length = 475

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
 Frame = -2

Query: 552 PIQMEFQVPMFTASGLRVRFLKVWE-KSGYNTVEWVRYITRAG-SYEIR 412
           P+Q++FQ+P FT SG++VR+LK+ E K  Y +  WVRYIT++G  Y IR
Sbjct: 425 PVQIKFQIPYFTTSGIQVRYLKINEPKLQYKSYPWVRYITQSGDDYTIR 473



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>AP1M_DISOM (P47795) AP-1 complex subunit mu (Clathrin coat assembly protein|
           AP47 homolog) (Clathrin coat-associated protein AP47
           homolog) (Golgi adaptor AP-1 47 kDa protein homolog)
           (HA1 47 kDa subunit homolog) (Clathrin assembly protein
           assembly protein
          Length = 418

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 17/56 (30%), Positives = 33/56 (58%)
 Frame = -2

Query: 579 GEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 412
           GE K    P + ++F++     SGL+V  L ++ +  Y   + V+Y+T+AG +++R
Sbjct: 363 GEAKPEENPTLNIQFRIQQLAVSGLKVNRLDMYGER-YKPFKGVKYVTKAGKFQVR 417



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>AP4M1_MOUSE (Q9JKC7) AP-4 complex subunit mu-1 (Adapter-related protein complex|
           4 mu-1 subunit) (Mu subunit of AP-4) (AP-4 adapter
           complex mu subunit) (Mu-adaptin-related protein 2)
           (mu-ARP2) (mu4)
          Length = 449

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = -2

Query: 552 PIQMEFQVPMFTASGLRVRFLKVWEKS--GYNTVEWVRYITRAGSYEIR 412
           P  + F++P  T SGL+VRFL++   +    N  +WVR+++ + +Y IR
Sbjct: 400 PASLSFELPRHTCSGLQVRFLRLSFSACGNANPHKWVRHLSHSNAYVIR 448



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>AP4M1_RAT (Q2PWT8) AP-4 complex subunit mu-1 (Adapter-related protein complex|
           4 mu-1 subunit) (Mu subunit of AP-4) (AP-4 adapter
           complex mu subunit) (Mu-adaptin-related protein 2)
           (mu-ARP2) (mu4)
          Length = 453

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = -2

Query: 552 PIQMEFQVPMFTASGLRVRFLKVWEKS--GYNTVEWVRYITRAGSYEIR 412
           P  + F++P  T SGL+VRFL++   +    N  +WVR+++ + +Y IR
Sbjct: 404 PASLSFELPRHTCSGLQVRFLRLSFSACGNANPHKWVRHLSHSNAYVIR 452



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>AP4M1_HUMAN (O00189) AP-4 complex subunit mu-1 (Adapter-related protein complex|
           4 mu-1 subunit) (Mu subunit of AP-4) (AP-4 adapter
           complex mu subunit) (Mu-adaptin-related protein 2)
           (mu-ARP2) (mu4)
          Length = 453

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = -2

Query: 552 PIQMEFQVPMFTASGLRVRFLKVWEK--SGYNTVEWVRYITRAGSYEIR 412
           P  + F++P  T SGL+VRFL++  +     N  +WVR+++ + +Y IR
Sbjct: 404 PASLSFELPRHTCSGLQVRFLRLAFRPCGNANPHKWVRHLSHSDAYVIR 452



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>AP3M2_RAT (P53678) AP-3 complex subunit mu-2 (Adapter-related protein complex|
           3 mu-2 subunit) (Clathrin coat assembly protein AP47
           homolog 2) (Clathrin coat-associated protein AP47
           homolog 2) (Golgi adaptor AP-1 47 kDa protein homolog 2)
           (HA1 47 kDa subu
          Length = 418

 Score = 37.4 bits (85), Expect = 0.039
 Identities = 16/57 (28%), Positives = 33/57 (57%)
 Frame = -2

Query: 582 MGEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 412
           +G  K    P I ++F++     SGL+V  L ++ +  Y   + ++Y+T+AG +++R
Sbjct: 362 VGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEK-YKPFKGIKYMTKAGKFQVR 417



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>AP3M2_MOUSE (Q8R2R9) AP-3 complex subunit mu-2 (Adapter-related protein complex|
           3 mu-2 subunit) (Clathrin coat assembly protein AP47
           homolog 2) (Clathrin coat-associated protein AP47
           homolog 2) (Golgi adaptor AP-1 47 kDa protein homolog 2)
           (HA1 47 kDa su
          Length = 418

 Score = 37.4 bits (85), Expect = 0.039
 Identities = 16/57 (28%), Positives = 33/57 (57%)
 Frame = -2

Query: 582 MGEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 412
           +G  K    P I ++F++     SGL+V  L ++ +  Y   + ++Y+T+AG +++R
Sbjct: 362 VGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEK-YKPFKGIKYMTKAGKFQVR 417



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>APM2_YEAST (P38700) Adaptin medium chain homolog APM2|
          Length = 605

 Score = 37.0 bits (84), Expect = 0.051
 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -2

Query: 549 IQMEFQVPMFTASGLRVRFLKVWE-KSGYNTVEWVRYIT 436
           + ++F++P  T SGL+V +LKV E +  Y +  WVRY T
Sbjct: 557 VNIDFEIPYCTCSGLKVEYLKVEEPQLQYQSFPWVRYKT 595



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>AP3M2_HUMAN (P53677) AP-3 complex subunit mu-2 (Adapter-related protein complex|
           3 mu-2 subunit) (Clathrin coat assembly protein AP47
           homolog 2) (Clathrin coat-associated protein AP47
           homolog 2) (Golgi adaptor AP-1 47 kDa protein homolog 2)
           (HA1 47 kDa su
          Length = 418

 Score = 37.0 bits (84), Expect = 0.051
 Identities = 16/56 (28%), Positives = 32/56 (57%)
 Frame = -2

Query: 579 GEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 412
           G  K    P I ++F++     SGL+V  L ++ +  Y   + ++Y+T+AG +++R
Sbjct: 363 GASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEK-YKPFKGIKYMTKAGKFQVR 417



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>AP3M1_RAT (P53676) AP-3 complex subunit mu-1 (Adapter-related protein complex|
           3 mu-1 subunit) (Mu-adaptin 3A) (AP-3 adapter complex
           mu3A subunit) (Clathrin coat assembly protein AP47
           homolog 1) (Clathrin coat-associated protein AP47
           homolog 1) (Golgi ada
          Length = 418

 Score = 37.0 bits (84), Expect = 0.051
 Identities = 17/56 (30%), Positives = 32/56 (57%)
 Frame = -2

Query: 579 GEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 412
           G  K    P + ++F++     SGL+V  L ++ +  Y   + V+YIT+AG +++R
Sbjct: 363 GAPKPEENPNLNIQFKIQQLAISGLKVNRLDMYGEK-YKPFKGVKYITKAGKFQVR 417



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>AP3M1_HUMAN (Q9Y2T2) AP-3 complex subunit mu-1 (Adapter-related protein complex|
           3 mu-1 subunit) (Mu-adaptin 3A) (AP-3 adapter complex
           mu3A subunit)
          Length = 418

 Score = 37.0 bits (84), Expect = 0.051
 Identities = 16/56 (28%), Positives = 32/56 (57%)
 Frame = -2

Query: 579 GEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 412
           G  K    P + ++F++     SGL+V  L ++ +  Y   + V+Y+T+AG +++R
Sbjct: 363 GAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGEK-YKPFKGVKYVTKAGKFQVR 417



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>AP3M1_MOUSE (Q9JKC8) AP-3 complex subunit mu-1 (Adapter-related protein complex|
           3 mu-1 subunit) (Mu-adaptin 3A) (AP-3 adapter complex
           mu3A subunit)
          Length = 418

 Score = 36.6 bits (83), Expect = 0.066
 Identities = 16/56 (28%), Positives = 32/56 (57%)
 Frame = -2

Query: 579 GEKKLANRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITRAGSYEIR 412
           G  K    P + ++F++     SGL+V  L ++ +  Y   + V+Y+T+AG +++R
Sbjct: 363 GAPKPEENPNLNIQFKIQQLAISGLKVNRLDMYGEK-YKPFKGVKYVTKAGKFQVR 417



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>GALT6_CAEEL (O61394) Probable N-acetylgalactosaminyltransferase 6 (EC 2.4.1.-)|
           (Protein-UDP acetylgalactosaminyltransferase 6)
           (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 6) (pp-GaNTase 6)
          Length = 618

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
 Frame = +1

Query: 208 GGRIHI-PCQHENKEHRKTACSDLPSAGVQTHRELGHNLRAF*SIMMRT------KRAPQ 366
           GGR+ I PC H     RK++  D P  G  + + L  NL     + M        K APQ
Sbjct: 373 GGRVEILPCSHVGHVFRKSSPHDFP--GKSSGKVLNTNLLRVAEVWMDDWKHYFYKIAPQ 430

Query: 367 IHEIRS 384
            H +RS
Sbjct: 431 AHRMRS 436



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>WBS14_CAEEL (P41846) WBSCR14 protein homolog (Mlx interactor)|
          Length = 1009

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +2

Query: 86  PFDTHSRRKQQELARGVLIN-ENKCYSQIYNKKYAL*HKQDTGGEYISRVNMKIRNIGKL 262
           P    S+RK+QE A   L+N +  C   + N K A+  ++ +G  Y+     +++ + K 
Sbjct: 716 PPSASSKRKEQEAAMAPLVNRQQSCDVNLLNGKMAVKVEEKSGRHYLPTTPTELKEVTKE 775

Query: 263 PALI 274
             L+
Sbjct: 776 EPLL 779



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>ACRBP_HUMAN (Q8NEB7) Acrosin-binding protein precursor (Proacrosin-binding|
           protein sp32) (Cancer testis antigen OY-TES-1)
          Length = 543

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 492 GTEHVNQKQ*TSEPGIPSESVACSLTSFPPL*RSVQLLHFIVASV 626
           G E V+Q Q  SEP   SES++ + +SF P  R V+    I+ ++
Sbjct: 241 GREAVSQLQTDSEPKFHSESLSSNPSSFAPRVREVESTPMIMENI 285



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>AMPL3_ARATH (Q944P7) Leucine aminopeptidase 3, chloroplast precursor (EC|
           3.4.11.1) (LAP 3) (Leucyl aminopeptidase 3) (Proline
           aminopeptidase 3) (EC 3.4.11.5) (Prolyl aminopeptidase
           3)
          Length = 583

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = -3

Query: 551 RFRWNSRFRCSLLLVYVFGSSRCGRRVATTPLSGFATSQGLDHMKSGVSDQE----KWRG 384
           RF++ SR R +  +  ++ SSR      +    G   +  +DH K   S +E    +W+G
Sbjct: 34  RFQFPSRLRLAFAVTPLYSSSRAMAHTISHATLGLTQANSVDHPKISFSGKEIDVTEWKG 93

Query: 383 LLIS 372
            +++
Sbjct: 94  DILA 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,026,395
Number of Sequences: 219361
Number of extensions: 2370818
Number of successful extensions: 4810
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4795
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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