>IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase inhibitor WIP1|
           precursor
          Length = 102

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = -3

Query: 372 KCCNNCR-SFSGVDVCDDAHPQCPKGCSACRV---VTPSPHKTFRCADMKSTVDGTCGGP 205
           KCC NC  SFSG+  CDD    C   C  C V    + S +  FRC D   T  G CG  
Sbjct: 45  KCCTNCNFSFSGLYTCDDVKKDCDPVCKKCVVAVHASYSGNNKFRCTD---TFLGMCGPK 101

Query: 204 C 202
           C
Sbjct: 102 C 102

>PKSJ_BACSU (P40806) Putative polyketide synthase pksJ (PKS)|
          Length = 5045

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +2

Query: 215  QVPSTVLFMSAQRNVL*GL--GVTTRQAEQPLGHWGWASSQTST 340
            Q+P T +FMSA  N    L    TT   E P G+  W  +Q+ T
Sbjct: 1869 QIPQTSVFMSASNNSYRALLPSDTTESLETPDGYVSWVLAQSGT 1912

>IBB1_ARAHY (P01066) Bowman-Birk type proteinase inhibitor A-II [Contains:|
           Bowman-Birk type proteinase inhibitor A-I; Bowman-Birk
           type proteinase inhibitor B-I; Bowman-Birk type
           proteinase inhibitor B-III]
          Length = 70

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
 Frame = -3

Query: 369 CCNNCRSFSGVD-----VCDDAHPQCPKGCSACRVVTPSPHKTFRCAD 241
           CCN C            VC D    CP  C++C V T S     RC D
Sbjct: 11  CCNGCLCDRRAPPYFECVCVDTFDHCPASCNSC-VCTRSNPPQCRCTD 57

>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)|
          Length = 347

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -3

Query: 159 VPPRIKLR*DEQSSCCYVCVWAVLYGQQYVRCLSSLC 49
           +PPR++   +EQ S C +C+  +   +   +C  S C
Sbjct: 149 LPPRLREEAEEQESTCPICLGEIQNAKTLEKCRHSFC 185

>ARHG6_HUMAN (Q15052) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6) (PAK-interacting
           exchange factor alpha) (Alpha-Pix) (COOL-2)
          Length = 776

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
 Frame = +2

Query: 83  PYSTAHTQT*QHDDCSSHLSFILGGTPRPSL------KP*SDQCFLHGPPQVPSTVL 235
           P S +         CS+H SF   G PR  L      KP S  C    PP  PS  L
Sbjct: 550 PASCSSLSKTSSSSCSAHSSFSSTGQPRGPLEPPQIIKPWSLSCLRPAPPLRPSAAL 606

>POMT1_DROME (Q9VTK2) Protein O-mannosyltransferase 1 (EC 2.4.1.109)|
           (Dolichyl-phosphate-mannose--protein mannosyltransferase
           1) (dPOMT1) (Protein rotated abdomen)
          Length = 886

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -3

Query: 375 PKCCNNCRSFSGVDVCDD--AHPQCPKGCSACRVVTPSPHKT 256
           P CCN  R+ + ++ C D   H   P   S  R  TP+P  T
Sbjct: 61  PLCCNGARALTMLNCCVDVNCHLNAPLRGSVNRHTTPTPTPT 102

>RECQ5_HUMAN (O94762) ATP-dependent DNA helicase Q5 (EC 3.6.1.-) (RecQ|
           protein-like 5) (RecQ5)
          Length = 991

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -3

Query: 357 CRSFSGVDVCDDAHPQCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGGP 205
           CR  +      DA P C KGC  C+  T +  +     +  S+   TC GP
Sbjct: 411 CRHAAIAKYFGDALPACAKGCDHCQNPT-AVRRRLEALERSSSWSKTCIGP 460

>ARHG6_RAT (Q5XXR3) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 772

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
 Frame = +2

Query: 83  PYSTAHTQT*QHDDCSSHLSFILGGTPRPSL------KP*SDQCFLHGPPQVPSTVL 235
           P S +         CS+H SF   G PR  L      KP S  C    PP  PS  L
Sbjct: 550 PASCSSLSKTSSSSCSTHSSFSSTGQPRGPLEPPQIIKPWSLSCLRPAPPLRPSAAL 606

>ZPBP1_HUMAN (Q9BS86) Zona pellucida-binding protein 1 precursor (Sp38)|
          Length = 351

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -3

Query: 354 RSFSGVDVCDDAHPQCPKGCSACRVVTPSPHKTFRCADMKSTV 226
           R F G  +    HP+CP+ C  C   + +P     C    S++
Sbjct: 301 RCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSL 343

>ARHG6_MOUSE (Q8K4I3) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 771

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
 Frame = +2

Query: 125 CSSHLSFILGGTPRPSL------KP*SDQCFLHGPPQVPSTVL 235
           CS+H SF   G PR  L      KP S  C    PP  PS  L
Sbjct: 563 CSTHSSFSSTGQPRGPLEPPQIIKPWSLSCLRPAPPLRPSAAL 605

>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
          Length = 1386

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/61 (32%), Positives = 25/61 (40%)
 Frame = +2

Query: 32   FSRERKHSDDKQRTYCWPYSTAHTQT*QHDDCSSHLSFILGGTPRPSLKP*SDQCFLHGP 211
            F RER+  DD+ ++Y               D   H S   GG  RPS    SD+    GP
Sbjct: 973  FDRERRPRDDRNQSY--------------RDKKDHSSSRRGGFDRPSYDRKSDRPPYEGP 1018

Query: 212  P 214
            P
Sbjct: 1019 P 1019

>TNR16_HUMAN (P08138) Tumor necrosis factor receptor superfamily member 16|
           precursor (Low-affinity nerve growth factor receptor)
           (NGF receptor) (Gp80-LNGFR) (p75 ICD) (Low affinity
           neurotrophin receptor p75NTR) (CD271 antigen)
          Length = 427

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 13/66 (19%)
 Frame = -3

Query: 372 KCCNNCRSFSGVDV----CDDAHPQCPKG---------CSACRVVTPSPHKTFRCADMKS 232
           K C  C     +       DDA  +C  G         C ACRV        F C D ++
Sbjct: 84  KPCTECVGLQSMSAPCVEADDAVCRCAYGYYQDETTGRCEACRVCEAGSGLVFSCQDKQN 143

Query: 231 TVDGTC 214
           TV   C
Sbjct: 144 TVCEEC 149

>IBB_HORVU (P12940) Bowman-Birk type trypsin inhibitor|
          Length = 124

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = -3

Query: 372 KCCNNC---RSFSGVDVCDDAHPQCPKGCSAC 286
           KCC+     RS   +  C D   +CPK C +C
Sbjct: 8   KCCDEAVCTRSIPPICTCMDEVFECPKTCKSC 39

>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)|
          Length = 347

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 159 VPPRIKLR*DEQSSCCYVCVWAVLYGQQYVRCLSSLC 49
           +PPR++   +EQ + C +C+  +   +   +C  S C
Sbjct: 149 LPPRLREDAEEQETTCPICLGEIQNAKTLEKCRHSFC 185

>LAMA2_MOUSE (Q60675) Laminin alpha-2 chain precursor (Laminin M chain) (Merosin|
           heavy chain)
          Length = 3106

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 23/87 (26%), Positives = 34/87 (39%)
 Frame = -3

Query: 375 PKCCNNCRSFSGVDVCDDAHPQCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGGPCKK 196
           P  C+    F GV+ CD    +C +G        P       C+ + ST +  C GPC  
Sbjct: 435 PGSCHCKTGFGGVN-CD----RCVRGYHGYPDCQPC-----NCSGLGSTNEDPCVGPCSC 484

Query: 195 H*SLQGFRLGRGVPPRIKLR*DEQSSC 115
             +++G    R       L+ D Q  C
Sbjct: 485 KENVEGEDCSRCKSGFFNLQEDNQKGC 511

>RSPO1_MOUSE (Q9Z132) R-spondin-1 precursor (Roof plate-specific spondin-1)|
           (Cysteine-rich and single thrombospondin
           domain-containing protein 3) (Cristin-3) (mCristin-3)
          Length = 265

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 10/77 (12%)
 Frame = -3

Query: 366 CNNCRSFSGVDVCDDA--------HPQCPKGCSACRVVTPSPHKTFRCADMKSTV--DGT 217
           C  C S +    C +A        +P CP+G +A        + T  C         + +
Sbjct: 102 CEACFSHNFCTKCQEALYLHKGRCYPACPEGSTAA-------NSTMECGSPAQCEMSEWS 154

Query: 216 CGGPCKKH*SLQGFRLG 166
             GPC K   L GFR G
Sbjct: 155 PWGPCSKKRKLCGFRKG 171

>DBP10_CANGA (Q6FNA2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)|
          Length = 969

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 106 NIATR*LLISSELYSRRHTSSEPEALKRS 192
           ++A +  L + +LY R  TS+ PE+LKRS
Sbjct: 596 DMAKKTALKAEKLYFRTRTSASPESLKRS 624

>PRIA_LENED (Q01200) Protein priA precursor|
          Length = 258

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 321 AHPQCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGG 208
           A P CPKG  AC  +  S    + C D  + ++ +CGG
Sbjct: 176 AVPACPKGLDAC-PIAGSSLGDYECLDTSAELE-SCGG 211

>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
            (Apolipoprotein E receptor) (APOER) (CD91 antigen)
          Length = 4544

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = -3

Query: 372  KCCNNCRSFSGVDVCDDAHPQCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGG 208
            +C +N    +G D C D   + P   +AC V        FRC       DGTC G
Sbjct: 2577 RCVSNMLWCNGADDCGDGSDEIPCNKTACGV------GEFRCR------DGTCIG 2619

>GLYA_PROMM (Q7V4U3) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 429

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 15/91 (16%)
 Frame = -3

Query: 306 PKGCSACRVVTPSPHKTFR--------CADM-------KSTVDGTCGGPCKKH*SLQGFR 172
           P   + C VVT + HKT R        C D        K+   G+ GGP +   + +   
Sbjct: 220 PSPIAHCDVVTTTTHKTLRGPRGGLILCRDADFGRKFDKAVFPGSQGGPLEHVIAAKAVA 279

Query: 171 LGRGVPPRIKLR*DEQSSCCYVCVWAVLYGQ 79
           LG  + P  ++      SC  V    VL G+
Sbjct: 280 LGEALQPEFQV-----YSCQVVANAQVLAGR 305

>GRN_RAT (P23785) Granulins precursor [Contains: Acrogranin; Granulin-1|
           (Granulin G); Granulin-2 (Granulin F); Granulin-3
           (Granulin B) (Epithelin-2); Granulin-4 (Granulin A)
           (Epithelin-1); Granulin-5 (Granulin C); Granulin-6
           (Granulin D); Granulin-7 (Gran
          Length = 588

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 16/67 (23%)
 Frame = -3

Query: 363 NNCRSFSGVDVCDDAHPQCPKG--CSA----CRVVTPS-------PHKTFRCADMKS--- 232
           ++C  FS    CDD    CP+G  CSA    C  ++ S       P   F C D  +   
Sbjct: 81  SSCCPFSEGVSCDDGQHCCPRGFHCSADGKSCSQISDSLLGAVQCPGSQFECPDSATCCI 140

Query: 231 TVDGTCG 211
            +DG+ G
Sbjct: 141 MIDGSWG 147

>POLG_HCVJL (Q68798) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3021

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +2

Query: 188  DQCFLHGPPQVPSTVLFMSAQRNVL*GLGVTTRQAEQ--PLGHWGW 319
            ++C  H P  V    L    ++NVL  + VTT+QAE+  P  H  W
Sbjct: 1712 EECSRHLPYLVEGQQLAEQFKQNVLGLIQVTTKQAEELKPAVHSAW 1757


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,300,348
Number of Sequences: 219361
Number of extensions: 843052
Number of successful extensions: 2275
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2270
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)