ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19l13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
2gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
4dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
5gb|AE000512.1| Thermotoga maritima MSB8, complete genome 46 0.15
6gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome 44 0.59
7gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome 44 0.59
8ref|XM_461262.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 2.3
9emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 42 2.3
10dbj|AK158975.1| Mus musculus visual cortex cDNA, RIKEN full-leng... 42 2.3
11gb|AC008767.7| Homo sapiens chromosome 5 clone CTD-2004K10, comp... 42 2.3
12gb|AC008892.7| Homo sapiens chromosome 5 clone CTD-2227I18, comp... 42 2.3
13emb|AL670413.19| Mouse DNA sequence from clone RP23-298E4 on chr... 42 2.3
14emb|CT573044.1| Pig DNA sequence from clone XX-BE156J14 on chrom... 42 2.3
15ref|XM_511711.1| PREDICTED: Pan troglodytes similar to Beta heav... 40 9.2
16gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 9.2
17ref|XM_420088.1| PREDICTED: Gallus gallus similar to dynein beta... 40 9.2
18ref|NM_029746.2| Mus musculus component of oligomeric golgi comp... 40 9.2
19gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
20gb|AC106745.4| Homo sapiens chromosome 16 clone RP11-134D3, comp... 40 9.2
21gb|AY456053.1| Botryotinia fuckeliana putative histidine kinase ... 40 9.2
22gb|AC026887.9| Homo sapiens chromosome 10 clone RP11-544P1, comp... 40 9.2
23gb|AC111086.18| Mus musculus chromosome 7, clone RP23-152P5, com... 40 9.2
24emb|AL445064.1|TACID2 Thermoplasma acidophilum complete genome; ... 40 9.2
25gb|AC091614.3| Homo sapiens chromosome 1 clone RP4-665J23, compl... 40 9.2
26gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, com... 40 9.2
27gb|AC022929.6| Homo sapiens, clone RP11-326N17, complete sequence 40 9.2
28gb|AC182681.2| Populus trichocarpa clone Pop1-32E14, complete se... 40 9.2
29dbj|AK157348.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 9.2
30gb|AC164657.4| Pan troglodytes BAC clone CH251-389C15 from chrom... 40 9.2
31dbj|AK169298.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 9.2
32dbj|AK171726.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 9.2
33gb|AF295066.1|AF314199S5 Homo sapiens neuroplastoma apoptosis-re... 40 9.2
34gb|AC160137.2| Mus musculus BAC clone RP23-136A1 from chromosome... 40 9.2
35dbj|AK012236.1| Mus musculus 11 days embryo whole body cDNA, RIK... 40 9.2
36dbj|AK089920.1| Mus musculus RCB-1283 B16 melanoma cDNA, RIKEN f... 40 9.2
37dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
38gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, com... 40 9.2
39gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, c... 40 9.2
40emb|BX649229.2| Chicken DNA sequence from clone WAG-41C10, compl... 40 9.2
41gb|BC011435.1| Mus musculus component of oligomeric golgi comple... 40 9.2
42dbj|AP003025.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.2
43gb|AC160024.2| Pan troglodytes BAC clone CH251-374N3 from chromo... 40 9.2
44gb|AC173115.2| Mus musculus BAC clone RP23-26D2 from chromosome ... 40 9.2
45gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
46gb|AC173210.3| Mus musculus BAC clone RP23-29I5 from chromosome ... 40 9.2
47gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, comple... 40 9.2
48gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complet... 40 9.2 
>dbj|AK059516.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-B12, full
            insert sequence
          Length = 1586

 Score =  174 bits (88), Expect = 2e-40
 Identities = 275/336 (81%), Gaps = 1/336 (0%)
 Strand = Plus / Minus

                                                                        
Query: 298  acttctctccggagggcgtcaacctccccggcatactccttctgttcctctgaaggcagc 357
            ||||||||||||||| | || |||||||| |||||||| || || || ||||| |||| |
Sbjct: 1234 acttctctccggaggtcatccacctccccagcatactctttttgctcttctgatggcaac 1175

                                                                        
Query: 358  tcctccagctgcacccccagtctgtacagaacactgtctagaccacatgactcgaagtcc 417
            ||||||| |||||| |||| ||||||||| ||||||   ||  |||| |||||||| || 
Sbjct: 1174 tcctccaactgcacgcccaatctgtacagtacactgctgaggtcacaggactcgaaatct 1115

                                                                        
Query: 418  ctagcgtctgtcaagggaagcttcagtaggctcctaatggccaacaaaaccttttcttga 477
             | || || ||  | | |||||||||||||||| | || |||||||||||||||||||||
Sbjct: 1114 gtggcttcagtggatgaaagcttcagtaggctcttgatagccaacaaaaccttttcttga 1055

                                                                        
Query: 478  aggtcaagatcaaactctgataacatatcagtgactgacttcagcaaaaaagcgttcact 537
            ||||| || |||||   ||| | |||||||   | |||||| || |||| | || |||||
Sbjct: 1054 aggtcgaggtcaaatcttgacagcatatcaaccaatgacttaagaaaaata-cggtcact 996

                                                                        
Query: 538  tacgaaagtgagccctgagtttccagaatttagctgaaagtccgctagatctgttaataa 597
            || |||||  || ||||| |||||||||||||||||||| || ||||||||||| | || 
Sbjct: 995  taagaaaggaagtcctgaatttccagaatttagctgaaaatctgctagatctgtcactag 936

                                                
Query: 598  aaacactgccttcttctgaagcccaacatcaacact 633
            ||||||||||||||||||||||| ||| ||||||||
Sbjct: 935  aaacactgccttcttctgaagccgaacgtcaacact 900
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>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0065A15, complete sequence
          Length = 168806

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                          
Query: 533    tcacttacgaaagtgagccctgagtttccagaatttagctgaaagtccgctagatctgtt 592
              ||||||| |||||  || ||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 135518 tcacttaagaaaggaagtcctgaatttccagaatttagctgaaaatctgctagatctgtc 135459

                                                       
Query: 593    aataaaaacactgccttcttctgaagcccaacatcaacact 633
              | || ||||||||||||||||||||||| ||| ||||||||
Sbjct: 135458 actagaaacactgccttcttctgaagccgaacgtcaacact 135418



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 139/172 (80%)
 Strand = Plus / Minus

                                                                          
Query: 298    acttctctccggagggcgtcaacctccccggcatactccttctgttcctctgaaggcagc 357
              ||||||||||||||| | || |||||||| |||||||| || || || ||||| |||| |
Sbjct: 136222 acttctctccggaggtcatccacctccccagcatactctttttgctcttctgatggcaac 136163

                                                                          
Query: 358    tcctccagctgcacccccagtctgtacagaacactgtctagaccacatgactcgaagtcc 417
              ||||||| |||||| |||| ||||||||| ||||||   ||  |||| |||||||| || 
Sbjct: 136162 tcctccaactgcacgcccaatctgtacagtacactgctgaggtcacaggactcgaaatct 136103

                                                                  
Query: 418    ctagcgtctgtcaagggaagcttcagtaggctcctaatggccaacaaaacct 469
               | || || ||  | | |||||||||||||||| | || |||||||||||||
Sbjct: 136102 gtggcttcagtggatgaaagcttcagtaggctcttgatagccaacaaaacct 136051
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                            
Query: 533      tcacttacgaaagtgagccctgagtttccagaatttagctgaaagtccgctagatctgtt 592
                ||||||| |||||  || ||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 19652443 tcacttaagaaaggaagtcctgaatttccagaatttagctgaaaatctgctagatctgtc 19652384

                                                         
Query: 593      aataaaaacactgccttcttctgaagcccaacatcaacact 633
                | || ||||||||||||||||||||||| ||| ||||||||
Sbjct: 19652383 actagaaacactgccttcttctgaagccgaacgtcaacact 19652343



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 139/172 (80%)
 Strand = Plus / Minus

                                                                            
Query: 298      acttctctccggagggcgtcaacctccccggcatactccttctgttcctctgaaggcagc 357
                ||||||||||||||| | || |||||||| |||||||| || || || ||||| |||| |
Sbjct: 19653147 acttctctccggaggtcatccacctccccagcatactctttttgctcttctgatggcaac 19653088

                                                                            
Query: 358      tcctccagctgcacccccagtctgtacagaacactgtctagaccacatgactcgaagtcc 417
                ||||||| |||||| |||| ||||||||| ||||||   ||  |||| |||||||| || 
Sbjct: 19653087 tcctccaactgcacgcccaatctgtacagtacactgctgaggtcacaggactcgaaatct 19653028

                                                                    
Query: 418      ctagcgtctgtcaagggaagcttcagtaggctcctaatggccaacaaaacct 469
                 | || || ||  | | |||||||||||||||| | || |||||||||||||
Sbjct: 19653027 gtggcttcagtggatgaaagcttcagtaggctcttgatagccaacaaaacct 19652976
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>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1399_D07, complete sequence
          Length = 65000

 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                         
Query: 533   tcacttacgaaagtgagccctgagtttccagaatttagctgaaagtccgctagatctgtt 592
             ||||||| |||||  || ||||| |||||||||||||||||||| || ||||||||||| 
Sbjct: 61925 tcacttaagaaaggaagtcctgaatttccagaatttagctgaaaatctgctagatctgtc 61866

                                                      
Query: 593   aataaaaacactgccttcttctgaagcccaacatcaacact 633
             | || ||||||||||||||||||||||| ||| ||||||||
Sbjct: 61865 actagaaacactgccttcttctgaagccgaacgtcaacact 61825



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 139/172 (80%)
 Strand = Plus / Minus

                                                                         
Query: 298   acttctctccggagggcgtcaacctccccggcatactccttctgttcctctgaaggcagc 357
             ||||||||||||||| | || |||||||| |||||||| || || || ||||| |||| |
Sbjct: 62629 acttctctccggaggtcatccacctccccagcatactctttttgctcttctgatggcaac 62570

                                                                         
Query: 358   tcctccagctgcacccccagtctgtacagaacactgtctagaccacatgactcgaagtcc 417
             ||||||| |||||| |||| ||||||||| ||||||   ||  |||| |||||||| || 
Sbjct: 62569 tcctccaactgcacgcccaatctgtacagtacactgctgaggtcacaggactcgaaatct 62510

                                                                 
Query: 418   ctagcgtctgtcaagggaagcttcagtaggctcctaatggccaacaaaacct 469
              | || || ||  | | |||||||||||||||| | || |||||||||||||
Sbjct: 62509 gtggcttcagtggatgaaagcttcagtaggctcttgatagccaacaaaacct 62458
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>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 149    aaataatctactctttcaaaaac 171
              |||||||||||||||||||||||
Sbjct: 456627 aaataatctactctttcaaaaac 456605
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>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 463    aaaaccttttcttgaaggtcaa 484
              ||||||||||||||||||||||
Sbjct: 830371 aaaaccttttcttgaaggtcaa 830392
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>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 463    aaaaccttttcttgaaggtcaa 484
              ||||||||||||||||||||||
Sbjct: 806671 aaaaccttttcttgaaggtcaa 806692
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>ref|XM_461262.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F22352g)
           partial mRNA
          Length = 1404

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 454 atggccaacaaaaccttttct 474
           |||||||||||||||||||||
Sbjct: 482 atggccaacaaaaccttttct 462
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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
               hansenii
          Length = 2336804

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 454     atggccaacaaaaccttttct 474
               |||||||||||||||||||||
Sbjct: 1786003 atggccaacaaaaccttttct 1785983
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>dbj|AK158975.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched
           library, clone:K530022N05 product:unclassifiable, full
           insert sequence
          Length = 1348

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 264 acccagcttgagcttctgttc 284
           |||||||||||||||||||||
Sbjct: 407 acccagcttgagcttctgttc 387
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>gb|AC008767.7| Homo sapiens chromosome 5 clone CTD-2004K10, complete sequence
          Length = 67016

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 455   tggccaacaaaaccttttctt 475
             |||||||||||||||||||||
Sbjct: 57353 tggccaacaaaaccttttctt 57373
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>gb|AC008892.7| Homo sapiens chromosome 5 clone CTD-2227I18, complete sequence
          Length = 113628

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 455   tggccaacaaaaccttttctt 475
             |||||||||||||||||||||
Sbjct: 96248 tggccaacaaaaccttttctt 96228
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>emb|AL670413.19| Mouse DNA sequence from clone RP23-298E4 on chromosome 4, complete
             sequence
          Length = 243792

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 264   acccagcttgagcttctgttc 284
             |||||||||||||||||||||
Sbjct: 31867 acccagcttgagcttctgttc 31847
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>emb|CT573044.1| Pig DNA sequence from clone XX-BE156J14 on chromosome 14, complete
              sequence
          Length = 184551

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 353    gcagctcctccagctgcaccc 373
              |||||||||||||||||||||
Sbjct: 159404 gcagctcctccagctgcaccc 159384
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>ref|XM_511711.1| PREDICTED: Pan troglodytes similar to Beta heavy chain of outer-arm
            axonemal dynein ATPase (LOC454924), mRNA
          Length = 14556

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  gcagctcctccagctgcacc 372
            ||||||||||||||||||||
Sbjct: 6553 gcagctcctccagctgcacc 6534
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 354    cagctcctccagctgcacccccag 377
              |||||||| |||||||||||||||
Sbjct: 445781 cagctcctgcagctgcacccccag 445758
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>ref|XM_420088.1| PREDICTED: Gallus gallus similar to dynein beta heavy chain, ciliary
            - sea urchin (Anthocidaris crassispina) (LOC422086), mRNA
          Length = 8208

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  gcagctcctccagctgcacc 372
            ||||||||||||||||||||
Sbjct: 2116 gcagctcctccagctgcacc 2097
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>ref|NM_029746.2| Mus musculus component of oligomeric golgi complex 2 (Cog2), mRNA
          Length = 2780

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cagctcctccagctgcaccc 373
           ||||||||||||||||||||
Sbjct: 188 cagctcctccagctgcaccc 169
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>gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0068E24, complete sequence
          Length = 141492

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 649   gtgctacagcatttgcgttc 668
             ||||||||||||||||||||
Sbjct: 52440 gtgctacagcatttgcgttc 52421
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>gb|AC106745.4| Homo sapiens chromosome 16 clone RP11-134D3, complete sequence
          Length = 164238

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   tccttctgttcctctgaagg 353
             ||||||||||||||||||||
Sbjct: 63783 tccttctgttcctctgaagg 63764
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>gb|AY456053.1| Botryotinia fuckeliana putative histidine kinase 4MPY gene, partial
           sequence
          Length = 3719

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 428 tcaagggaagcttcagtagg 447
           ||||||||||||||||||||
Sbjct: 710 tcaagggaagcttcagtagg 691
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>gb|AC026887.9| Homo sapiens chromosome 10 clone RP11-544P1, complete sequence
          Length = 187495

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 592    taataaaaacactgccttct 611
              ||||||||||||||||||||
Sbjct: 163931 taataaaaacactgccttct 163950
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>gb|AC111086.18| Mus musculus chromosome 7, clone RP23-152P5, complete sequence
          Length = 186200

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   cagctcctccagctgcaccc 373
             ||||||||||||||||||||
Sbjct: 84327 cagctcctccagctgcaccc 84308
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>emb|AL445064.1|TACID2 Thermoplasma acidophilum complete genome; segment 2/5
          Length = 338100

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    cttctcttctcttcatccgt 230
              ||||||||||||||||||||
Sbjct: 287131 cttctcttctcttcatccgt 287112
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>gb|AC091614.3| Homo sapiens chromosome 1 clone RP4-665J23, complete sequence
          Length = 107764

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 155   tctactctttcaaaaacttggcaa 178
             |||||||||||||||| |||||||
Sbjct: 59217 tctactctttcaaaaaattggcaa 59240
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>gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, complete sequence
          Length = 157691

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    tccttctgttcctctgaagg 353
              ||||||||||||||||||||
Sbjct: 121146 tccttctgttcctctgaagg 121127
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>gb|AC022929.6| Homo sapiens, clone RP11-326N17, complete sequence
          Length = 165328

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 638   cttcccaagatgtgctacagcatt 661
             ||||||||||||||||| ||||||
Sbjct: 21169 cttcccaagatgtgctagagcatt 21146
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>gb|AC182681.2| Populus trichocarpa clone Pop1-32E14, complete sequence
          Length = 42495

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   gccaacaaaaccttttcttg 476
             ||||||||||||||||||||
Sbjct: 15903 gccaacaaaaccttttcttg 15922
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>dbj|AK157348.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830212C01 product:component of
           oligomeric golgi complex 2, full insert sequence
          Length = 2101

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cagctcctccagctgcaccc 373
           ||||||||||||||||||||
Sbjct: 210 cagctcctccagctgcaccc 191
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>gb|AC164657.4| Pan troglodytes BAC clone CH251-389C15 from chromosome unknown,
             complete sequence
          Length = 182992

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   tccagctgcacccccagtct 380
             ||||||||||||||||||||
Sbjct: 67946 tccagctgcacccccagtct 67927
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>dbj|AK169298.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:I920178A01 product:component of oligomeric golgi
           complex 2, full insert sequence
          Length = 2792

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cagctcctccagctgcaccc 373
           ||||||||||||||||||||
Sbjct: 218 cagctcctccagctgcaccc 199
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>dbj|AK171726.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830007D23 product:component of
           oligomeric golgi complex 2, full insert sequence
          Length = 2741

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cagctcctccagctgcaccc 373
           ||||||||||||||||||||
Sbjct: 167 cagctcctccagctgcaccc 148
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>gb|AF295066.1|AF314199S5 Homo sapiens neuroplastoma apoptosis-related RNA-binding protein
             (CUGBP2) gene, exons 5, 6, 7, and 8
          Length = 22536

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 592   taataaaaacactgccttct 611
             ||||||||||||||||||||
Sbjct: 11707 taataaaaacactgccttct 11688
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>gb|AC160137.2| Mus musculus BAC clone RP23-136A1 from chromosome 9, complete sequence
          Length = 241917

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     catagctagctatgcaattc 40
              ||||||||||||||||||||
Sbjct: 103091 catagctagctatgcaattc 103072
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>dbj|AK012236.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2700012E02 product:low density
           lipoprotein receptor defect C complementing, full insert
           sequence
          Length = 419

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cagctcctccagctgcaccc 373
           ||||||||||||||||||||
Sbjct: 182 cagctcctccagctgcaccc 163
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>dbj|AK089920.1| Mus musculus RCB-1283 B16 melanoma cDNA, RIKEN full-length enriched
           library, clone:G430003G24 product:low density
           lipoprotein receptor defect C complementing, full insert
           sequence
          Length = 2807

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cagctcctccagctgcaccc 373
           ||||||||||||||||||||
Sbjct: 232 cagctcctccagctgcaccc 213
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 649      gtgctacagcatttgcgttc 668
                ||||||||||||||||||||
Sbjct: 22899933 gtgctacagcatttgcgttc 22899914
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>gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, complete sequence
          Length = 235286

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    tccttctgttcctctgaagg 353
              ||||||||||||||||||||
Sbjct: 218221 tccttctgttcctctgaagg 218202
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>gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, complete sequence
          Length = 181971

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   gcagctcctccagctgcacc 372
             ||||||||||||||||||||
Sbjct: 66467 gcagctcctccagctgcacc 66486
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>emb|BX649229.2| Chicken DNA sequence from clone WAG-41C10, complete sequence
          Length = 147869

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   aggcagctcctccagctgca 370
             ||||||||||||||||||||
Sbjct: 34178 aggcagctcctccagctgca 34197
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>gb|BC011435.1| Mus musculus component of oligomeric golgi complex 2, mRNA (cDNA
           clone MGC:18753 IMAGE:4010102), complete cds
          Length = 2780

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cagctcctccagctgcaccc 373
           ||||||||||||||||||||
Sbjct: 188 cagctcctccagctgcaccc 169
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>dbj|AP003025.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-217L21, complete
             sequence
          Length = 193828

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   tccagctgcacccccagtct 380
             ||||||||||||||||||||
Sbjct: 70279 tccagctgcacccccagtct 70260
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>gb|AC160024.2| Pan troglodytes BAC clone CH251-374N3 from chromosome unknown, complete
             sequence
          Length = 163279

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   tccagctgcacccccagtct 380
             ||||||||||||||||||||
Sbjct: 14242 tccagctgcacccccagtct 14261
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>gb|AC173115.2| Mus musculus BAC clone RP23-26D2 from chromosome 13, complete sequence
          Length = 221491

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 455    tggccaacaaaaccttttct 474
              ||||||||||||||||||||
Sbjct: 150526 tggccaacaaaaccttttct 150507
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 649      gtgctacagcatttgcgttc 668
                ||||||||||||||||||||
Sbjct: 23209843 gtgctacagcatttgcgttc 23209824
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>gb|AC173210.3| Mus musculus BAC clone RP23-29I5 from chromosome 13, complete sequence
          Length = 228881

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    tggccaacaaaaccttttct 474
              ||||||||||||||||||||
Sbjct: 217307 tggccaacaaaaccttttct 217326
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>gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, complete sequence
          Length = 169193

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    cagctcctccagctgcaccc 373
              ||||||||||||||||||||
Sbjct: 167821 cagctcctccagctgcaccc 167840
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>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence
          Length = 191241

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   cagctcctccagctgcaccc 373
             ||||||||||||||||||||
Sbjct: 57980 cagctcctccagctgcaccc 57999


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,531,657
Number of Sequences: 3902068
Number of extensions: 6531657
Number of successful extensions: 216744
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 216435
Number of HSP's gapped (non-prelim): 309
length of query: 676
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 653
effective length of database: 17,143,297,704
effective search space: 11194573400712
effective search space used: 11194573400712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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