ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19l07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precur... 321 6e-85
2emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precur... 313 1e-82
3emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical pr... 313 1e-82
4emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosp... 252 5e-64
5gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate c... 246 3e-62
6gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisp... 238 7e-60
7dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 170 1e-39
8dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 163 3e-37
9emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical pr... 135 7e-29
10dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate c... 131 1e-27
11gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisp... 127 2e-26
12gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisp... 123 3e-25
13gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate ca... 123 3e-25
14gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisph... 123 3e-25
15gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphat... 123 3e-25
16gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulos... 123 3e-25
17gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carbo... 123 3e-25
18gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bi... 121 1e-24
19gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carbo... 119 4e-24
20gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisph... 115 7e-23
21gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphat... 115 7e-23
22emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putat... 115 7e-23
23dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosp... 111 1e-21
24gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bi... 107 2e-20
25gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulos... 107 2e-20
26gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate ca... 107 2e-20
27gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate... 107 2e-20
28gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphospha... 107 2e-20
29dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 107 2e-20
30dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 107 2e-20
31gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate... 103 3e-19
32gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphat... 103 3e-19
33dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphospha... 103 3e-19
34dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 103 3e-19
35gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bi... 100 4e-18
36gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bi... 100 4e-18
37gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate ... 100 4e-18
38dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 100 4e-18
39dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate... 96 6e-17
40dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for r... 96 6e-17
41dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphat... 96 6e-17
42dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp... 96 6e-17
43dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisph... 96 6e-17
44dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphospha... 96 6e-17
45dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph... 96 6e-17
46dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bispho... 96 6e-17
47dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 96 6e-17
48dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 96 6e-17
49dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 96 6e-17
50dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 94 2e-16
51dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp... 94 2e-16
52dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 94 2e-16
53dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 94 2e-16
54dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 94 2e-16
55dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 94 2e-16
56dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 88 2e-14
57dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph... 88 2e-14
58dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bispho... 88 2e-14
59dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 88 2e-14
60dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphat... 88 2e-14
61dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate... 88 2e-14
62dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for r... 88 2e-14
63dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 86 6e-14
64dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for rib... 86 6e-14
65dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 86 6e-14
66dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 80 4e-12
67dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 80 4e-12
68dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 80 4e-12
69dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for rib... 76 6e-11
70dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 64 2e-07
71gb|AY843526.1| Ammopiptanthus mongolicus ribulose-1,5-bisphospha... 54 2e-04
72emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ri... 54 2e-04
73emb|X60000.1|PVRBCOS P.vulgaris rbcS mRNA for small subunit of r... 52 8e-04
74emb|X59999.1|PVRBCS P.vulgaris rbcS mRNA for small subunit of ri... 52 8e-04
75emb|X57022.1|PVSS15BCO P. vulgaris rbcS cDNA (with intronic sequ... 52 8e-04
76gb|AF139469.2|AF139469 Vigna radiata ribulose-1,5-bisphosphate c... 50 0.003
77emb|X03820.1|PERBCS08 Petunia x hybrida rbcS gene (ssu8) for rib... 50 0.003
78gb|M29643.1|PETRBCC Petunia ribulose 1,5-bisphosphate carboxylas... 50 0.003
79dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate... 48 0.013
80emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) 46 0.052
81gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate ... 44 0.21
82ref|XM_413976.1| PREDICTED: Gallus gallus similar to erythrocyte... 40 3.2
83ref|XM_415931.1| PREDICTED: Gallus gallus similar to tektin 1 (L... 40 3.2
84emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on ch... 40 3.2
85emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chrom... 40 3.2
86gb|AC182737.1| Gasterosteus aculeatus clone VMRC26-154C03, compl... 40 3.2
87emb|CR386900.1| Gallus gallus finished cDNA, clone ChEST1013d16 40 3.2
88emb|BX950794.1| Gallus gallus finished cDNA, clone ChEST272l10 40 3.2
89emb|AL161666.4|CNS01RHA Human chromosome 14 DNA sequence BAC R-8... 40 3.2 
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39 ribulosebisphosphate carboxylase) clones 234
           and 406
          Length = 743

 Score =  321 bits (162), Expect = 6e-85
 Identities = 219/239 (91%), Gaps = 2/239 (0%)
 Strand = Plus / Minus

                                                                       
Query: 11  catacacatattcttaggnacaagataagaacaganaaatggagaaggaaaacccaaagc 70
           |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||
Sbjct: 612 catacacatattcttaggaacaa-ataagaa-agataaatggagaaggaaaacccaaagc 555

                                                                       
Query: 71  agtgtcagagttgacaaaactgcaatggcactttatatgnggcccatcgtcagtgagctg 130
           | ||||||||||||||||||||||||||||||||||||  ||||  |||| |||||||||
Sbjct: 554 aatgtcagagttgacaaaactgcaatggcactttatatatggcctgtcgtgagtgagctg 495

                                                                       
Query: 131 tttatgccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcact 190
           |||| |||||||||||||||| | |||| |||||||||||||| ||||| ||||||||||
Sbjct: 494 tttaggccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcact 435

                                                                      
Query: 191 gnacctgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           | ||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||
Sbjct: 434 gcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttc 376
to top
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39) (ribulosebisphosphate carboxylase, clone 512)
          Length = 611

 Score =  313 bits (158), Expect = 1e-82
 Identities = 218/239 (91%), Gaps = 2/239 (0%)
 Strand = Plus / Minus

                                                                       
Query: 11  catacacatattcttaggnacaagataagaacaganaaatggagaaggaaaacccaaagc 70
           |||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||
Sbjct: 461 catacacatattcttaggaacaag-taagaa-agacaaatggagaaggaaaacccaaagc 404

                                                                       
Query: 71  agtgtcagagttgacaaaactgcaatggcactttatatgnggcccatcgtcagtgagctg 130
           | ||||||||||||||||||||||||||||||||||||| ||||| | || |||||||||
Sbjct: 403 aatgtcagagttgacaaaactgcaatggcactttatatgtggcccgtggtgagtgagctg 344

                                                                       
Query: 131 tttatgccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcact 190
           |||| |||||||||||||||| | |||| |||||||||||||| ||||| ||||||||||
Sbjct: 343 tttaggccttgccggactcctcgcagcccggtggcttgaaggcaatgaagctgacgcact 284

                                                                      
Query: 191 gnacctgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           | ||||| ||||||||||  ||| ||||||||||||| |||||||||||||||||||||
Sbjct: 283 gcacctggcgcatgttgtcgaatccgatgatgcggacgtacgcgtcagggtactccttc 225
to top
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9
          Length = 875

 Score =  313 bits (158), Expect = 1e-82
 Identities = 218/239 (91%), Gaps = 2/239 (0%)
 Strand = Plus / Minus

                                                                       
Query: 11  catacacatattcttaggnacaagataagaacaganaaatggagaaggaaaacccaaagc 70
           |||||||||||||||||| |||| ||||||| ||| ||||||| ||||||||||||||||
Sbjct: 733 catacacatattcttaggaacaa-ataagaa-agataaatggacaaggaaaacccaaagc 676

                                                                       
Query: 71  agtgtcagagttgacaaaactgcaatggcactttatatgnggcccatcgtcagtgagctg 130
           | ||||||||||||||||||||||||||||||||||||| ||||| | || |||||||||
Sbjct: 675 aatgtcagagttgacaaaactgcaatggcactttatatgcggcccgtggtgagtgagctg 616

                                                                       
Query: 131 tttatgccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcact 190
           ||||||||||||||||||||| | |||| |||||||||||||| ||||| ||||||||||
Sbjct: 615 tttatgccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcact 556

                                                                      
Query: 191 gnacctgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           | ||||| ||||||||||  ||| ||||||||||||| |||||||||||||||||||||
Sbjct: 555 gcacctggcgcatgttgtcgaatccgatgatgcggacgtacgcgtcagggtactccttc 497
to top
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase, small subunit
          Length = 837

 Score =  252 bits (127), Expect = 5e-64
 Identities = 213/240 (88%), Gaps = 4/240 (1%)
 Strand = Plus / Minus

                                                                       
Query: 11  catacacatattcttaggnacaagataagaacaganaaatggagaaggaaaacccaaagc 70
           |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||
Sbjct: 693 catacacatattcttaggaacaa-ataagaa-agataaatggagaaggaaaacccaaagc 636

                                                                       
Query: 71  agtgtcagagttgacaaaactgcaatggcacttt-atatgnggcccatcgtcagtgagct 129
           | |||||||||||||||||||||||||||||||| ||||  ||||  |||| ||||||||
Sbjct: 635 aatgtcagagttgacaaaactgcaatggcacttttatat-aggcctgtcgtgagtgagct 577

                                                                       
Query: 130 gtttatgccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcac 189
           ||||| |||||||||||||||| | |||| ||||||||| |||| ||||| |||||| ||
Sbjct: 576 gtttaggccttgccggactcctcgcagcccggtggcttggaggcgatgaagctgacggac 517

                                                                       
Query: 190 tgnacctgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           || ||||||||||||||||  ||| |||||||||||  ||| | ||||||||||||||||
Sbjct: 516 tgcacctgacgcatgttgtcgaatccgatgatgcggcaataggggtcagggtactccttc 457
to top
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 816

 Score =  246 bits (124), Expect = 3e-62
 Identities = 185/202 (91%), Gaps = 6/202 (2%)
 Strand = Plus / Minus

                                                                       
Query: 48  aatggagaaggaaaacccaaagcagtgtcagagttgacaaaactgcaatggcactttata 107
           |||||||||||||||||  ||||| |||||||||||||||| |||||||||||||| |||
Sbjct: 626 aatggagaaggaaaacc--aagca-tgtcagagttgacaaa-ctgcaatggcactt-ata 572

                                                                       
Query: 108 tgnggcccatcgtcagtgagctgtttatgccttgccggactcctngnagcctggtggctt 167
           || | ||||||||||||||||||||||||||||||| ||||||| | |||||||||||||
Sbjct: 571 tgtg-cccatcgtcagtgagctgtttatgccttgcccgactcctggcagcctggtggctt 513

                                                                       
Query: 168 gaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatgatgcggac 227
           ||| || ||||| ||||||||||| ||||||||||||||||  ||| |||||||||||||
Sbjct: 512 gaaagcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggac 453

                                 
Query: 228 atacgcgtcagggtactccttc 249
           ||||||||||||||||||||||
Sbjct: 452 atacgcgtcagggtactccttc 431
to top
>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase
           small subunit mRNA, clone pTS406, 3' end
          Length = 317

 Score =  238 bits (120), Expect = 7e-60
 Identities = 171/188 (90%), Gaps = 2/188 (1%)
 Strand = Plus / Minus

                                                                       
Query: 11  catacacatattcttaggnacaagataagaacaganaaatggagaaggaaaacccaaagc 70
           |||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||
Sbjct: 186 catacacatattcttaggaacaa-ataagaa-agataaatggagaaggaaaacccaaagc 129

                                                                       
Query: 71  agtgtcagagttgacaaaactgcaatggcactttatatgnggcccatcgtcagtgagctg 130
           | ||||||||||||||||||||||||||||||||||||  ||||  |||| |||||||||
Sbjct: 128 aatgtcagagttgacaaaactgcaatggcactttatatatggcctgtcgtgagtgagctg 69

                                                                       
Query: 131 tttatgccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcact 190
           |||| |||||||||||||||| | |||| |||||||||||||| ||||| ||||||||||
Sbjct: 68  tttaggccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcact 9

                   
Query: 191 gnacctga 198
           | ||||||
Sbjct: 8   gcacctga 1
to top
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p9-1
          Length = 739

 Score =  170 bits (86), Expect = 1e-39
 Identities = 105/114 (92%)
 Strand = Plus / Minus

                                                                       
Query: 136 gccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacc 195
           |||||||||||||||| | |||| |||||||||||||| ||||| ||||||||||| |||
Sbjct: 735 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 676

                                                                 
Query: 196 tgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |||||||||||||  ||| |||||||||||||||||||||||||||||||||||
Sbjct: 675 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttc 622
to top
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p2-1
          Length = 653

 Score =  163 bits (82), Expect = 3e-37
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                       
Query: 136 gccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacc 195
           |||||||||||||||| | |||| |||||||||||||| ||||| ||||||||||| |||
Sbjct: 649 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 590

                                                                 
Query: 196 tgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           || ||||||||||  ||| |||||||||||||||||||||||||||||||||||
Sbjct: 589 tggcgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttc 536
to top
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5
          Length = 845

 Score =  135 bits (68), Expect = 7e-29
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                       
Query: 131 tttatgccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcact 190
           |||||||||||||||| |||| | ||| ||||||| ||||||| ||||| ||||||||||
Sbjct: 596 tttatgccttgccggattcctcgcagcntggtggcctgaaggcaatgaagctgacgcact 537

                                                                      
Query: 191 gnacctgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           | ||||| ||||||||||  ||  |||||| ||||||||| ||||||||||||||||||
Sbjct: 536 gcacctggcgcatgttgtcgaagccgatgacgcggacataggcgtcagggtactccttc 478
to top
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Ave-A
          Length = 590

 Score =  131 bits (66), Expect = 1e-27
 Identities = 91/102 (89%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 590 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 531

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||||||||| ||||||||||||||||||
Sbjct: 530 tcgaaaccgatgatgcggacataggcgtcagggtactccttc 489
to top
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 586

 Score =  127 bits (64), Expect = 2e-26
 Identities = 95/108 (87%)
 Strand = Plus / Minus

                                                                       
Query: 142 ccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgc 201
           ||||| |||| | ||||||||||||||||||| ||||| ||||||||||| || ||||| 
Sbjct: 585 ccggattcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacgg 526

                                                           
Query: 202 atgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |||||||  ||  |||||||||||||||| ||||||||||||||||||
Sbjct: 525 atgttgtcgaagccgatgatgcggacataggcgtcagggtactccttc 478
to top
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 600

 Score =  123 bits (62), Expect = 3e-25
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | ||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||
Sbjct: 593 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 534

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||||||||| ||||||||||||||||||
Sbjct: 533 tcgaagccgatgatgcggacataggcgtcagggtactccttc 492
to top
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) gene, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 594

 Score =  123 bits (62), Expect = 3e-25
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | ||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||
Sbjct: 587 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 528

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||||||||| ||||||||||||||||||
Sbjct: 527 tcgaagccgatgatgcggacataggcgtcagggtactccttc 486
to top
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score =  123 bits (62), Expect = 3e-25
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | |||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||||||||| ||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttc 396
to top
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score =  123 bits (62), Expect = 3e-25
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | ||||||||||||||||||| ||||| ||||| ||||| |||||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacctgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||||||||| ||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttc 396
to top
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
           carboxylase small subunit (rbcS) mRNA, partial cds
          Length = 504

 Score =  123 bits (62), Expect = 3e-25
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | |||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||||||||| ||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttc 396
to top
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase
           (RUBISCO) gene, complete cds
          Length = 779

 Score =  123 bits (62), Expect = 3e-25
 Identities = 99/114 (86%)
 Strand = Plus / Minus

                                                                       
Query: 136 gccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacc 195
           ||||||||||| |||| | ||||||||||| ||||||| ||||| |||||||| || |||
Sbjct: 581 gccttgccggattcctcgcagcctggtggcctgaaggcaatgaagctgacgcattgcacc 522

                                                                 
Query: 196 tgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           || ||||||||||  ||  |||||| |||||||||||| |||||||||||||||
Sbjct: 521 tggcgcatgttgtcgaaaccgatgacgcggacatacgcatcagggtactccttc 468
to top
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score =  121 bits (61), Expect = 1e-24
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                       
Query: 155 agcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatn 214
           |||| |||||||||||||| ||||| ||||||||||| |||||||| |||||||  ||  
Sbjct: 490 agcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttgtcgaagc 431

                                              
Query: 215 cgatgatgcggacatacgcgtcagggtactccttc 249
           |||||||||||||||| ||||||||||||||||||
Sbjct: 430 cgatgatgcggacataggcgtcagggtactccttc 396
to top
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO)
            gene, exons 1 and 2
          Length = 2205

 Score =  119 bits (60), Expect = 4e-24
 Identities = 103/120 (85%)
 Strand = Plus / Minus

                                                                        
Query: 130  gtttatgccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcac 189
            ||||| |||||||||||||||| | | || |||||| ||||||| ||||| |||||||||
Sbjct: 1511 gtttaggccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 1452

                                                                        
Query: 190  tgnacctgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
            || ||||| |||| |||||  ||  |||||| ||||||||| ||||||||||||||||||
Sbjct: 1451 tgcacctggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttc 1392
to top
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score =  115 bits (58), Expect = 7e-23
 Identities = 89/102 (87%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | |||| |||||||||||||| ||||| ||||||||||| || ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||||||||| ||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttc 396
to top
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score =  115 bits (58), Expect = 7e-23
 Identities = 89/102 (87%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | ||||||||||||||||||| ||||| ||||| ||||| || ||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||||||||| ||||||||||||||||||
Sbjct: 437 tctaagccgatgatgcggacataggcgtcagggtactccttc 396
to top
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small
           subunit (rbcS gene)
          Length = 518

 Score =  115 bits (58), Expect = 7e-23
 Identities = 98/114 (85%)
 Strand = Plus / Minus

                                                                       
Query: 136 gccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacc 195
           |||||||||||||||| | | || |||||| ||||||| ||||| ||||||||||| |||
Sbjct: 514 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 455

                                                                 
Query: 196 tgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           || |||| |||||  ||  |||||| ||||||||| ||||||||||||||||||
Sbjct: 454 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttc 401
to top
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bro-B
          Length = 784

 Score =  111 bits (56), Expect = 1e-21
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||||||||||| ||||| ||||||||||| |||||||||| ||| |  ||  |||||
Sbjct: 772 ggtggcttgaaggcgatgaagctgacgcactgcacctgacgcaagttatcgaaaccgatg 713

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           ||||||||||| ||||||||||||||||||
Sbjct: 712 atgcggacataggcgtcagggtactccttc 683
to top
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score =  107 bits (54), Expect = 2e-20
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | |||||||||||||||| || ||||| ||||||||||| || ||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttc 396
to top
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
           carboxylase small subunit (rbcS) mRNA, nuclear gene
           encoding chloroplast protein, partial cds
          Length = 504

 Score =  107 bits (54), Expect = 2e-20
 Identities = 85/98 (86%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | |||| |||||||||||||| ||||| ||||||||||| || ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaaactgacgcactgcacttgacggatgttg 438

                                                 
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactc 245
           |  ||  |||||||||||||||| ||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactc 400
to top
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score =  107 bits (54), Expect = 2e-20
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | |||| |||||||||||||| ||||| ||||| ||||| || ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||||||||| ||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttc 396
to top
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score =  107 bits (54), Expect = 2e-20
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | |||||||||||||||| || ||||| ||||||||||| || ||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttc 396
to top
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score =  107 bits (54), Expect = 2e-20
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | |||| |||||||||||||| ||||| ||||||||||| || ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |  ||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttc 396
to top
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p13-1
          Length = 985

 Score =  107 bits (54), Expect = 2e-20
 Identities = 97/114 (85%)
 Strand = Plus / Minus

                                                                       
Query: 136 gccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacc 195
           |||||||||||||||| | | || |||||| ||||||| ||||| ||||||||||| |||
Sbjct: 981 gccttgccggactcctcgcaacccggtggcctgaaggcaatgaagctgacgcactgcacc 922

                                                                 
Query: 196 tgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           || || | |||||  ||  |||||| ||||||||| ||||||||||||||||||
Sbjct: 921 tggcgtaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttc 868
to top
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase Small subunit, complete cds,
           clone:p6-1
          Length = 638

 Score =  107 bits (54), Expect = 2e-20
 Identities = 97/114 (85%)
 Strand = Plus / Minus

                                                                       
Query: 136 gccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacc 195
           |||||||||||||||| | | || |||||| |||| || ||||| ||||||||||| |||
Sbjct: 634 gccttgccggactcctcgcaacccggtggcctgaatgcgatgaagctgacgcactgcacc 575

                                                                 
Query: 196 tgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           || |||| |||||  ||  |||||| ||||||||| ||||||||||||||||||
Sbjct: 574 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttc 521
to top
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) gene, partial cds
          Length = 620

 Score =  103 bits (52), Expect = 3e-19
 Identities = 92/108 (85%)
 Strand = Plus / Minus

                                                                       
Query: 142 ccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgc 201
           ||||| |||| | |||| ||||||||||| || ||||| ||||||||||| || ||||| 
Sbjct: 619 ccggattcctcgcagcccggtggcttgaatgcgatgaagctgacgcactgcacttgacgg 560

                                                           
Query: 202 atgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |||||||  ||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 559 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttc 512
to top
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 593

 Score =  103 bits (52), Expect = 3e-19
 Identities = 92/108 (85%)
 Strand = Plus / Minus

                                                                       
Query: 142 ccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgc 201
           ||||| |||| | |||||||||||||||| || ||||| ||||||||||| || || || 
Sbjct: 592 ccggattcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttggcgg 533

                                                           
Query: 202 atgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           |||||||  ||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 532 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttc 485
to top
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sea-B
          Length = 728

 Score =  103 bits (52), Expect = 3e-19
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 716 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 657

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||||||||||||||||||||||
Sbjct: 656 acgcggacatacgcgtcagggtactccttc 627
to top
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
            carboxylase/oxygenase small subunit, complete cds,
            clone:6, subclone:16
          Length = 5980

 Score =  103 bits (52), Expect = 3e-19
 Identities = 101/120 (84%)
 Strand = Plus / Minus

                                                                        
Query: 130  gtttatgccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcac 189
            ||||| |||||||| ||||||| | | || |||||| |||| || ||||| |||||||||
Sbjct: 1265 gtttaggccttgccagactcctcgcaacccggtggcctgaatgcgatgaagctgacgcac 1206

                                                                        
Query: 190  tgnacctgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
            || ||||| |||| |||||  ||  |||||| ||||||||| ||||||||||||||||||
Sbjct: 1205 tgcacctggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttc 1146



 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                        
Query: 175  atgaanctgacgcactgnacctgacgcatgttgtnnaatncgatgatgcggacatacgcg 234
            ||||| ||||||||||  ||||| |||| |||||  ||  ||||||||| |||||| |||
Sbjct: 4281 atgaagctgacgcactacacctggcgcaggttgtcgaagccgatgatgcagacataggcg 4222

                           
Query: 235  tcagggtactccttc 249
            |||||||||||||||
Sbjct: 4221 tcagggtactccttc 4207
to top
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | |||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
              ||  |||||||||| ||||| ||||||||||||| ||||
Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttc 396
to top
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | |||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
              ||  |||||||||| ||||| ||||||||||||| ||||
Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttc 396
to top
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 148 tcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttg 207
           |||| | |||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438

                                                     
Query: 208 tnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
              ||  |||||||||| ||||| ||||||||||||| ||||
Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttc 396
to top
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p10-1
          Length = 629

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 96/114 (84%)
 Strand = Plus / Minus

                                                                       
Query: 136 gccttgccggactcctngnagcctggtggcttgaaggcnatgaanctgacgcactgnacc 195
           |||||||||||||||| | | ||||||||| ||||||| ||||| ||||||||||| |||
Sbjct: 625 gccttgccggactcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacc 566

                                                                 
Query: 196 tgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggtactccttc 249
           || |||| |||||  ||  || |||  |||||||| || |||||||||||||||
Sbjct: 565 tggcgcaggttgtcgaagccgttgacacggacataggcatcagggtactccttc 512
to top
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sec-B
          Length = 789

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 777 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 718

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 717 acgcggacataggcgtcagggtactccttc 688
to top
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Ara-B
          Length = 787

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 775 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 716

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 715 acgcggacataggcgtcagggtactccttc 686
to top
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Ura-B
          Length = 787

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 775 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 716

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 715 acgcggacataggcgtcagggtactccttc 686
to top
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Squ-B
          Length = 781

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 769 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 710

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 709 acgcggacataggcgtcagggtactccttc 680
to top
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Agr-A
          Length = 604

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 592 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 533

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 532 acgcggacataggcgtcagggtactccttc 503
to top
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sea-A
          Length = 611

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| | ||||| ||||| ||||||||||| |||||||||| |||||  ||  |||||
Sbjct: 599 ggtggcctaaaggcgatgaagctgacgcactgcacctgacgcaggttgtcgaagccgatg 540

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 539 acgcggacataggcgtcagggtactccttc 510
to top
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bic-A
          Length = 605

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 593 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 534

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 533 acgcggacataagcgtcagggtactccttc 504
to top
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sha-A
          Length = 605

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 593 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 534

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 533 acgcggacataggcgtcagggtactccttc 504
to top
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A3
          Length = 605

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 593 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 534

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 533 acgcggacataggcgtcagggtactccttc 504
to top
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A2
          Length = 605

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 593 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 534

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 533 acgcggacataggcgtcagggtactccttc 504
to top
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A1
          Length = 605

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 593 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 534

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 533 acgcggacataggcgtcagggtactccttc 504
to top
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-B
          Length = 772

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 157 cctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncg 216
           ||||||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  ||
Sbjct: 763 cctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccg 704

                                            
Query: 217 atgatgcggacatacgcgtcagggtactccttc 249
           ||||  |||||||| ||||||||||||||||||
Sbjct: 703 atgacacggacataggcgtcagggtactccttc 671
to top
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Squ-A
          Length = 607

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 157 cctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncg 216
           ||||||||| | ||||| ||||| ||||||||||| ||||| |||| |||||  ||  ||
Sbjct: 598 cctggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccg 539

                                            
Query: 217 atgatgcggacatacgcgtcagggtactccttc 249
           |||| ||||||||| ||||||||||||||||||
Sbjct: 538 atgacgcggacataggcgtcagggtactccttc 506
to top
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A3
          Length = 604

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 157 cctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncg 216
           ||||||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  ||
Sbjct: 595 cctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccg 536

                                            
Query: 217 atgatgcggacatacgcgtcagggtactccttc 249
           ||||  |||||||| ||||||||||||||||||
Sbjct: 535 atgacacggacataggcgtcagggtactccttc 503
to top
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A2
          Length = 604

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 157 cctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncg 216
           ||||||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  ||
Sbjct: 595 cctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccg 536

                                            
Query: 217 atgatgcggacatacgcgtcagggtactccttc 249
           ||||  |||||||| ||||||||||||||||||
Sbjct: 535 atgacacggacataggcgtcagggtactccttc 503
to top
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe1-A1
          Length = 604

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 157 cctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncg 216
           ||||||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  ||
Sbjct: 595 cctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttgtcgaagccg 536

                                            
Query: 217 atgatgcggacatacgcgtcagggtactccttc 249
           ||||  |||||||| ||||||||||||||||||
Sbjct: 535 atgacacggacataggcgtcagggtactccttc 503
to top
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds
          Length = 604

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 157 cctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncg 216
           ||||||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  ||
Sbjct: 595 cctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttgtcgaagccg 536

                                            
Query: 217 atgatgcggacatacgcgtcagggtactccttc 249
           ||||  |||||||| ||||||||||||||||||
Sbjct: 535 atgacacggacataggcgtcagggtactccttc 503
to top
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-B2
          Length = 781

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 769 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 710

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           |  |||||||| ||||||||||||||||||
Sbjct: 709 acacggacataggcgtcagggtactccttc 680
to top
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bic-B
          Length = 783

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 776 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 717

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           |  |||||||| ||||||||||||||||||
Sbjct: 716 acacggacataggcgtcagggtactccttc 687
to top
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sha-B
          Length = 792

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 780 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 721

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           |  |||||||| ||||||||||||||||||
Sbjct: 720 acacggacataggcgtcagggtactccttc 691
to top
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-B
          Length = 792

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 780 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 721

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           |  |||||||| ||||||||||||||||||
Sbjct: 720 acacggacataggcgtcagggtactccttc 691
to top
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Hor-A
          Length = 605

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 593 ggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatg 534

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           || ||||| || ||||||||||||||||||
Sbjct: 533 atacggacgtaagcgtcagggtactccttc 504
to top
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sec-A
          Length = 591

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| | ||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 579 ggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 520

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           | ||||||||| ||||||||||||||||||
Sbjct: 519 acgcggacataggcgtcagggtactccttc 490
to top
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Ara-A
          Length = 604

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 592 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 533

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           |  |||||||| ||||||||||||||||||
Sbjct: 532 acacggacataggcgtcagggtactccttc 503
to top
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-A
          Length = 605

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                       
Query: 157 cctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncg 216
           ||||||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  ||
Sbjct: 596 cctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccg 537

                                            
Query: 217 atgatgcggacatacgcgtcagggtactccttc 249
           ||||  |||||||| || |||||||||||||||
Sbjct: 536 atgacacggacataggcatcagggtactccttc 504
to top
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Dic-A
          Length = 605

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                       
Query: 157 cctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncg 216
           ||||||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  ||
Sbjct: 596 cctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccg 537

                                            
Query: 217 atgatgcggacatacgcgtcagggtactccttc 249
           ||||  |||||||| || |||||||||||||||
Sbjct: 536 atgacacggacataggcatcagggtactccttc 504
to top
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A1
          Length = 604

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                       
Query: 157 cctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncg 216
           ||||||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  ||
Sbjct: 595 cctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccg 536

                                            
Query: 217 atgatgcggacatacgcgtcagggtactccttc 249
           ||||  |||||||| ||||||| ||||||||||
Sbjct: 535 atgacacggacataggcgtcagagtactccttc 503
to top
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-B1
          Length = 787

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| | ||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 775 ggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 716

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           |  |||||||| ||||||||||||||||||
Sbjct: 715 acacggacataggcgtcagggtactccttc 686
to top
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe1-B
          Length = 787

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| ||||||| ||||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 775 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 716

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           |  |||||||| || |||||||||||||||
Sbjct: 715 acacggacataggcatcagggtactccttc 686
to top
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe2-A
          Length = 604

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                       
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatg 219
           |||||| |||||||  |||| ||||||||||| ||||| |||| |||||  ||  |||||
Sbjct: 592 ggtggcctgaaggcgctgaagctgacgcactgcacctggcgcaggttgtcaaagccgatg 533

                                         
Query: 220 atgcggacatacgcgtcagggtactccttc 249
           |  |||||||| ||||||||||||||||||
Sbjct: 532 acacggacataggcgtcagggtactccttc 503
to top
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Dic-B
          Length = 787

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                       
Query: 170 aggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatgatgcggacat 229
           |||| ||||| ||||||||||| ||||| |||| |||||  ||  ||||||  |||||||
Sbjct: 765 aggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatgacacggacat 706

                               
Query: 230 acgcgtcagggtactccttc 249
           | ||||||||||||||||||
Sbjct: 705 aggcgtcagggtactccttc 686
to top
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe2-B
          Length = 738

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 182 tgacgcactgnacctgacgcatgttgtnnaatncgatgatgcggacatacgcgtcagggt 241
           |||||||||| ||||| |||| |||||  ||  ||||||  |||||||| ||||||||||
Sbjct: 738 tgacgcactgcacctggcgcaggttgtcaaagccgatgacacggacataggcgtcagggt 679

                   
Query: 242 actccttc 249
           ||||||||
Sbjct: 678 actccttc 671
to top
>gb|AY843526.1| Ammopiptanthus mongolicus ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit mRNA, complete cds;
           chloroplast
          Length = 824

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                       
Query: 155 agcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatn 214
           |||||||||||||| |||| ||||| |||| |||||| || |||||  ||||||  ||| 
Sbjct: 564 agcctggtggcttgtaggcaatgaaactgatgcactgaacttgacgtttgttgtcgaatc 505

                        
Query: 215 cgatgatgcggac 227
           | ||||| |||||
Sbjct: 504 caatgattcggac 492
to top
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate
           carboxylase small subunit percursor (rbcs gene)
          Length = 686

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 163 ggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatgatg 222
           |||||| |||| ||||| ||||||||||| || ||||| | |||||  ||| |||| |||
Sbjct: 581 ggcttgtaggcgatgaagctgacgcactgcacttgacggacgttgtcgaatccgataatg 522

                
Query: 223 cggac 227
           |||||
Sbjct: 521 cggac 517
to top
>emb|X60000.1|PVRBCOS P.vulgaris rbcS mRNA for small subunit of ribulose bisphosphate
           carboxylase/oxygenase (clone pPvSS191)
          Length = 849

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 155 agcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatn 214
           |||||||||||||| |||| ||||| |||| |||||| || ||||| | |||||  ||| 
Sbjct: 576 agcctggtggcttgtaggcaatgaaactgatgcactgcacttgacgaacgttgtcaaatc 517

                       
Query: 215 cgatgatgcgga 226
           | ||||| ||||
Sbjct: 516 caatgatacgga 505
to top
>emb|X59999.1|PVRBCS P.vulgaris rbcS mRNA for small subunit of ribulose bisphosphate
           carboxylase/oxygenase (clone pPvSS965)
          Length = 591

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 155 agcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatn 214
           |||||||||||||| |||| ||||| |||| |||||| || ||||| | |||||  ||| 
Sbjct: 404 agcctggtggcttgtaggcaatgaaactgatgcactgcacttgacgaacgttgtcaaatc 345

                       
Query: 215 cgatgatgcgga 226
           | ||||| ||||
Sbjct: 344 caatgatacgga 333
to top
>emb|X57022.1|PVSS15BCO P. vulgaris rbcS cDNA (with intronic sequences) for small subunit
           of ribulose 1,5-bisphosphate carboxylase/oxygenase
          Length = 1071

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 155 agcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatn 214
           |||||||||||||| |||| ||||| |||| |||||| || ||||| | |||||  ||| 
Sbjct: 785 agcctggtggcttgtaggcaatgaaactgatgcactgcacttgacgaacgttgtcaaatc 726

                       
Query: 215 cgatgatgcgga 226
           | ||||| ||||
Sbjct: 725 caatgatacgga 714
to top
>gb|AF139469.2|AF139469 Vigna radiata ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, complete cds; nuclear gene for chloroplast
           product
          Length = 782

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 155 agcctggtggcttgaaggcnatgaanctgacgcactgnacctgacg 200
           |||||||||||||| |||| ||||| |||| |||||| || |||||
Sbjct: 587 agcctggtggcttgtaggcaatgaaactgatgcactgaacttgacg 542
to top
>emb|X03820.1|PERBCS08 Petunia x hybrida rbcS gene (ssu8) for ribulose 1,5-bisphosphate
            carboxylase small subunit
          Length = 2242

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 55/67 (82%)
 Strand = Plus / Minus

                                                                        
Query: 155  agcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatn 214
            |||||||||||||| |||| ||||| |||| ||| || || ||||| | |||||  ||| 
Sbjct: 1892 agcctggtggcttgtaggcaatgaaactgatgcattgcacttgacggacgttgtcgaatc 1833

                   
Query: 215  cgatgat 221
            |||||||
Sbjct: 1832 cgatgat 1826
to top
>gb|M29643.1|PETRBCC Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA
           (clone pSSU 41), partial cds
          Length = 251

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 55/67 (82%)
 Strand = Plus / Minus

                                                                       
Query: 155 agcctggtggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatn 214
           |||||||||||||| |||| ||||| |||| ||| || || ||||| | |||||  ||| 
Sbjct: 136 agcctggtggcttgtaggcaatgaaactgatgcattgcacttgacggacgttgtcgaatc 77

                  
Query: 215 cgatgat 221
           |||||||
Sbjct: 76  cgatgat 70
to top
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds
          Length = 790

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 160 ggtggcttgaaggcnatgaanctgacgcactgnacctgacg 200
           |||||||||||||| ||||| |||| |||||| || |||||
Sbjct: 576 ggtggcttgaaggcaatgaaactgatgcactgcacttgacg 536
to top
>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene)
          Length = 761

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 155 agcctggtggcttgaaggcnatgaanctgacgcactg 191
           |||||||||||||| |||| ||||| |||| ||||||
Sbjct: 565 agcctggtggcttggaggcaatgaaactgatgcactg 529
to top
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS1) mRNA, complete cds
          Length = 853

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 52/64 (81%)
 Strand = Plus / Minus

                                                                       
Query: 163 ggcttgaaggcnatgaanctgacgcactgnacctgacgcatgttgtnnaatncgatgatg 222
           |||||| |||| ||||| |||| |||||| ||||| ||  ||||||  ||  ||||||||
Sbjct: 598 ggcttgtaggcgatgaaactgatgcactgcacctggcggttgttgtcgaagccgatgatg 539

               
Query: 223 cgga 226
           ||||
Sbjct: 538 cgga 535
to top
>ref|XM_413976.1| PREDICTED: Gallus gallus similar to erythrocyte protein band 4.1-like
            4 (LOC415608), mRNA
          Length = 3196

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 51   ggagaaggaaaacccaaagcagtg 74
            |||||||||||||||||| |||||
Sbjct: 2447 ggagaaggaaaacccaaaacagtg 2470
to top
>ref|XM_415931.1| PREDICTED: Gallus gallus similar to tektin 1 (LOC417686), mRNA
          Length = 1751

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  gaaaacccaaagcagtgtca 77
           ||||||||||||||||||||
Sbjct: 398 gaaaacccaaagcagtgtca 417
to top
>emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on chromosome 6, complete
              sequence
          Length = 175757

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     aaaactgcaatggcacttta 105
              ||||||||||||||||||||
Sbjct: 166594 aaaactgcaatggcacttta 166575
to top
>emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chromosome 1 Contains part of
             the DAB1 gene for disabled homolog 1 (Drosophila),
             complete sequence
          Length = 134011

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    cagagttgacaaaactgcaatggc 99
             |||||||||||||||| |||||||
Sbjct: 88758 cagagttgacaaaactacaatggc 88735
to top
>gb|AC182737.1| Gasterosteus aculeatus clone VMRC26-154C03, complete sequence
          Length = 109447

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    cagtgtcagagttgacaaaa 89
             ||||||||||||||||||||
Sbjct: 30129 cagtgtcagagttgacaaaa 30148
to top
>emb|CR386900.1| Gallus gallus finished cDNA, clone ChEST1013d16
          Length = 755

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 51  ggagaaggaaaacccaaagcagtg 74
           |||||||||||||||||| |||||
Sbjct: 615 ggagaaggaaaacccaaaacagtg 638
to top
>emb|BX950794.1| Gallus gallus finished cDNA, clone ChEST272l10
          Length = 887

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  gaaaacccaaagcagtgtca 77
           ||||||||||||||||||||
Sbjct: 284 gaaaacccaaagcagtgtca 303
to top
>emb|AL161666.4|CNS01RHA Human chromosome 14 DNA sequence BAC R-89K22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167108

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aaggaaaacccaaagcagtg 74
             ||||||||||||||||||||
Sbjct: 99603 aaggaaaacccaaagcagtg 99622


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,415,436
Number of Sequences: 3902068
Number of extensions: 1415436
Number of successful extensions: 24340
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24236
Number of HSP's gapped (non-prelim): 95
length of query: 249
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 227
effective length of database: 17,147,199,772
effective search space: 3892414348244
effective search space used: 3892414348244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top