ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 446 e-122
2dbj|AK060026.1| Oryza sativa (japonica cultivar-group) cDNA clon... 446 e-122
3dbj|AK059929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 446 e-122
4dbj|AB026558.1| Oryza sativa (japonica cultivar-group) OsPAA1 mR... 446 e-122
5ref|XM_470540.1| Oryza sativa (japonica cultivar-group), predic... 438 e-120
6dbj|AK104324.1| Oryza sativa (japonica cultivar-group) cDNA clon... 438 e-120
7emb|AJ293343.1|ZMA293343 Zea mays mRNA for maize 20S proteasome ... 385 e-103
8gb|AY104377.1| Zea mays PCO108605 mRNA sequence 349 6e-93
9gb|BT014031.1| Lycopersicon esculentum clone 133094R, mRNA sequence 149 1e-32
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 125 2e-25
11emb|Y16644.1|NTY16644 Nicotiana tabacum mRNA for proteasome A-ty... 125 2e-25
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
13gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 125 2e-25
14gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome... 125 2e-25
15ref|NM_122950.2| Arabidopsis thaliana PAA1; endopeptidase/ pepti... 88 3e-14
16emb|Y13691.1|ATY13691 Arabidopsis thaliana mRNA for proteasome s... 88 3e-14
17gb|AY114564.1| Arabidopsis thaliana multicatalytic endopeptidase... 88 3e-14
18gb|AY092969.1| Arabidopsis thaliana multicatalytic endopeptidase... 88 3e-14
19gb|AF043518.1|AF043518 Arabidopsis thaliana 20S proteasome subun... 68 3e-08
20gb|AF034572.1|AF034572 Glycine max proteasome IOTA subunit mRNA,... 66 1e-07
21ref|NM_126597.2| Arabidopsis thaliana PAA2; endopeptidase/ pepti... 60 8e-06
22gb|AY143829.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, compl... 60 8e-06
23gb|AY052679.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, compl... 60 8e-06
24gb|AF043519.1|AF043519 Arabidopsis thaliana 20S proteasome subun... 60 8e-06
25ref|NM_001036263.1| Arabidopsis thaliana PAA2; endopeptidase/ pe... 56 1e-04
26dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 54 5e-04
27emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on ch... 46 0.11
28gb|AC098969.2| Homo sapiens chromosome 3 clone RP11-24O17, compl... 44 0.45
29gb|AC156556.8| Mus musculus chromosome 7, clone RP23-92E8, compl... 42 1.8
30gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map ... 42 1.8
31gb|AC022039.7| Homo sapiens chromosome 8, clone RP11-3G21, compl... 42 1.8
32gb|AC098818.3| Homo sapiens BAC clone RP11-109G23 from 4, comple... 42 1.8
33dbj|AP003471.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.8
34dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.8
35gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, co... 40 7.0
36gb|BC079919.1| Xenopus laevis MGC78853 protein, mRNA (cDNA clone... 40 7.0
37gb|AC161289.2| Pan troglodytes BAC clone CH251-170B19 from chrom... 40 7.0
38gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome 40 7.0
39gb|AC183672.2| Pan troglodytes BAC clone CH251-546K4 from chromo... 40 7.0
40gb|AC122418.4| Mus musculus BAC clone RP24-159E6 from chromosome... 40 7.0
41gb|AC146024.3| Pan troglodytes BAC clone RP43-119C21 from 7, com... 40 7.0
42gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complet... 40 7.0
43gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete... 40 7.0
44gb|AC004128.1| Homo sapiens PAC clone RP5-850G1 from 7, complete... 40 7.0
45gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp... 40 7.0
46gb|AC183922.3| Pan troglodytes BAC clone CH251-344F10 from chrom... 40 7.0
47emb|BX321911.6| Mouse DNA sequence from clone RP23-255M6 on chro... 40 7.0
48gb|AY128534.1| Homo sapiens cyclin-dependent kinase 6 (CDK6) gen... 40 7.0
49gb|AC161266.2| Mus musculus BAC clone RP23-231B13 from chromosom... 40 7.0
50gb|AC149040.2| Medicago truncatula chromosome 7 BAC clone mth2-9... 40 7.0
51gb|AC092598.2| Homo sapiens BAC clone RP11-114B11 from 2, comple... 40 7.0
52ref|XM_574455.1| PREDICTED: Rattus norvegicus similar to hypothe... 40 7.0
53gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome 40 7.0
54gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, comp... 40 7.0
55gb|AC154868.3| Monodelphis domestica, clone XX-211C4, complete s... 40 7.0
56gb|AC133955.4| Mus musculus BAC clone RP23-249M4 from 6, complet... 40 7.0 
>dbj|AK101031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150K05, full
           insert sequence
          Length = 1048

 Score =  446 bits (225), Expect = e-122
 Identities = 336/373 (90%)
 Strand = Plus / Minus

                                                                       
Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199
           |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 858 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 799

                                                                       
Query: 200 accggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaat 259
             | ||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 798 ctctgaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaat 739

                                                                       
Query: 260 cttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtga 319
           ||||||| ||||| ||||||||||||||||| |||||||| |||||||| || || | ||
Sbjct: 738 cttcctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggaga 679

                                                                       
Query: 320 actgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtc 379
           |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 678 actgtgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagac 619

                                                                       
Query: 380 cggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgag 439
           |||| ||||||||||| |||||||||||||||||||| |||||||| ||||| || ||||
Sbjct: 618 cggcgctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgag 559

                                                                       
Query: 440 catttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatg 499
           | |||||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| |
Sbjct: 558 cgtttttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtagg 499

                        
Query: 500 catgctgcgtgta 512
           |||||||||||||
Sbjct: 498 catgctgcgtgta 486



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 57  acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104
           |||||||||| ||||||||||||||||||||||  ||||||| |||||
Sbjct: 962 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 915
to top
>dbj|AK060026.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C02, full
           insert sequence
          Length = 1043

 Score =  446 bits (225), Expect = e-122
 Identities = 336/373 (90%)
 Strand = Plus / Minus

                                                                       
Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199
           |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 846 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 787

                                                                       
Query: 200 accggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaat 259
             | ||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 786 ctctgaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaat 727

                                                                       
Query: 260 cttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtga 319
           ||||||| ||||| ||||||||||||||||| |||||||| |||||||| || || | ||
Sbjct: 726 cttcctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggaga 667

                                                                       
Query: 320 actgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtc 379
           |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 666 actgtgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagac 607

                                                                       
Query: 380 cggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgag 439
           |||| ||||||||||| |||||||||||||||||||| |||||||| ||||| || ||||
Sbjct: 606 cggcgctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgag 547

                                                                       
Query: 440 catttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatg 499
           | |||||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| |
Sbjct: 546 cgtttttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtagg 487

                        
Query: 500 catgctgcgtgta 512
           |||||||||||||
Sbjct: 486 catgctgcgtgta 474



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 57  acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104
           |||||||||| ||||||||||||||||||||||  ||||||| |||||
Sbjct: 950 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 903
to top
>dbj|AK059929.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-A07, full
           insert sequence
          Length = 1042

 Score =  446 bits (225), Expect = e-122
 Identities = 336/373 (90%)
 Strand = Plus / Minus

                                                                       
Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199
           |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 859 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 800

                                                                       
Query: 200 accggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaat 259
             | ||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 799 ctctgaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaat 740

                                                                       
Query: 260 cttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtga 319
           ||||||| ||||| ||||||||||||||||| |||||||| |||||||| || || | ||
Sbjct: 739 cttcctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggaga 680

                                                                       
Query: 320 actgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtc 379
           |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 679 actgtgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagac 620

                                                                       
Query: 380 cggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgag 439
           |||| ||||||||||| |||||||||||||||||||| |||||||| ||||| || ||||
Sbjct: 619 cggcgctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgag 560

                                                                       
Query: 440 catttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatg 499
           | |||||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| |
Sbjct: 559 cgtttttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtagg 500

                        
Query: 500 catgctgcgtgta 512
           |||||||||||||
Sbjct: 499 catgctgcgtgta 487



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 57  acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104
           |||||||||| ||||||||||||||||||||||  ||||||| |||||
Sbjct: 963 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 916
to top
>dbj|AB026558.1| Oryza sativa (japonica cultivar-group) OsPAA1 mRNA for alpha 1
           subunit of 20S proteasome, complete cds
          Length = 1010

 Score =  446 bits (225), Expect = e-122
 Identities = 336/373 (90%)
 Strand = Plus / Minus

                                                                       
Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199
           |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 824 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 765

                                                                       
Query: 200 accggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaat 259
             | ||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 764 ctctgaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaat 705

                                                                       
Query: 260 cttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtga 319
           ||||||| ||||| ||||||||||||||||| |||||||| |||||||| || || | ||
Sbjct: 704 cttcctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggaga 645

                                                                       
Query: 320 actgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtc 379
           |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 644 actgtgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagac 585

                                                                       
Query: 380 cggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgag 439
           |||| ||||||||||| |||||||||||||||||||| |||||||| ||||| || ||||
Sbjct: 584 cggcgctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgag 525

                                                                       
Query: 440 catttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatg 499
           | |||||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| |
Sbjct: 524 cgtttttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtagg 465

                        
Query: 500 catgctgcgtgta 512
           |||||||||||||
Sbjct: 464 catgctgcgtgta 452



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 57  acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104
           |||||||||| ||||||||||||||||||||||  ||||||| |||||
Sbjct: 928 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 881
to top
>ref|XM_470540.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 741

 Score =  438 bits (221), Expect = e-120
 Identities = 332/369 (89%)
 Strand = Plus / Minus

                                                                       
Query: 144 tcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtgaccg 203
           |||||||||||| || |||||||||||||||||||| |||||||||||||||||||  | 
Sbjct: 741 tcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtgctct 682

                                                                       
Query: 204 gaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaatcttc 263
           ||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 681 gaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaatcttc 622

                                                                       
Query: 264 ctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtgaactg 323
           ||| ||||| ||||||||||||||||| |||||||| |||||||| || || | ||||||
Sbjct: 621 ctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggagaactg 562

                                                                       
Query: 324 cgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtccggc 383
            |||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 tgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagaccggc 502

                                                                       
Query: 384 actagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatt 443
            ||||||||||| |||||||||||||||||||| |||||||| ||||| || ||||| ||
Sbjct: 501 gctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgagcgtt 442

                                                                       
Query: 444 tttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatg 503
           |||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| |||||
Sbjct: 441 tttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtaggcatg 382

                    
Query: 504 ctgcgtgta 512
           |||||||||
Sbjct: 381 ctgcgtgta 373
to top
>dbj|AK104324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G09, full
           insert sequence
          Length = 995

 Score =  438 bits (221), Expect = e-120
 Identities = 335/373 (89%)
 Strand = Plus / Minus

                                                                       
Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199
           |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 846 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 787

                                                                       
Query: 200 accggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaat 259
             | ||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 786 ctctgaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaat 727

                                                                       
Query: 260 cttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtga 319
           ||||||| ||||| ||||||||||||||||| |||||||| |||||||| || || | ||
Sbjct: 726 cttcctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggaga 667

                                                                       
Query: 320 actgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtc 379
           |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 666 actgtgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagac 607

                                                                       
Query: 380 cggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgag 439
            ||| ||||||||||| |||||||||||||||||||| |||||||| ||||| || ||||
Sbjct: 606 tggcgctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgag 547

                                                                       
Query: 440 catttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatg 499
           | |||||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| |
Sbjct: 546 cgtttttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtagg 487

                        
Query: 500 catgctgcgtgta 512
           |||||||||||||
Sbjct: 486 catgctgcgtgta 474



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 57  acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104
           |||||||||| ||||||||||||||||||||||  ||||||| |||||
Sbjct: 950 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 903
to top
>emb|AJ293343.1|ZMA293343 Zea mays mRNA for maize 20S proteasome alpha subunit (paa gene)
          Length = 1040

 Score =  385 bits (194), Expect = e-103
 Identities = 326/370 (88%)
 Strand = Plus / Minus

                                                                       
Query: 143 ctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtgacc 202
           ||||||| || || ||||| || || ||||||||||| ||||||||||||||||| |  |
Sbjct: 823 ctcagtcacgttcactaattgccgtcaggtgctgatcgatctcctctgtcgtgagagctc 764

                                                                       
Query: 203 ggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaatctt 262
            ||| || ||||| ||||| ||||||||||| || |||||||| || |||||||||||||
Sbjct: 763 tgaaaacgcggtcatcttttctcacaacaccaacttcgatctcagtggccttgaaatctt 704

                                                                       
Query: 263 cctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtgaact 322
           |||| ||||| |||||||| ||||| || |||||||| |||||||||||||| ||||| |
Sbjct: 703 cctggagaactgattgcaacgcagatattgcaatctgcacagtttcgtcataggtgaatt 644

                                                                       
Query: 323 gcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtccgg 382
            ||||  ||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 643 tcgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttgagcccgg 584

                                                                       
Query: 383 cactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcat 442
           ||||||||||||| ||||||||||||||||| || ||||| |||||||| || || ||||
Sbjct: 583 cactagttgccttatgtccaaagaagtgaccagcagggtcgcacttgaatagttgggcat 524

                                                                       
Query: 443 ttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcat 502
           ||||||| ||||| || |||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 523 ttttctcttcatcgtagcccaagaccatagcaactactccaaggggtctcatgtatgcat 464

                     
Query: 503 gctgcgtgta 512
           ||||||||||
Sbjct: 463 gctgcgtgta 454
to top
>gb|AY104377.1| Zea mays PCO108605 mRNA sequence
          Length = 1142

 Score =  349 bits (176), Expect = 6e-93
 Identities = 323/372 (86%)
 Strand = Plus / Minus

                                                                       
Query: 141 agctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtga 200
           ||||||||| || || ||||| || || |||||||| |||||||||||||| |||||   
Sbjct: 834 agctcagtcccgttcactaattgccgtcaggtgctggtcaatctcctctgttgtgagaac 775

                                                                       
Query: 201 ccggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaatc 260
            | ||| | ||| |||||||| ||||||||||| || |||||||| || |||||||||||
Sbjct: 774 tctgaaaagacgttcttcttttctcacaacaccaacttcgatctcagtggccttgaaatc 715

                                                                       
Query: 261 ttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtgaa 320
           |||||| ||||| |||||||||||||| || ||||||||||||||||| ||||| |||||
Sbjct: 714 ttcctggagaactgattgcaatgcagatattgcaatctgaacagtttcatcataggtgaa 655

                                                                       
Query: 321 ctgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtcc 380
            | ||||  |||||||||||||||||||| |||||||||||||||||||||||| || ||
Sbjct: 654 tttcgggtcatccttcattttcttctccaaaaaatttattgcttcctgctccttgagccc 595

                                                                       
Query: 381 ggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagc 440
           ||||||||||||||| ||||||||||||||||| || ||||| || ||||| || || ||
Sbjct: 594 ggcactagttgccttatgtccaaagaagtgacccgcagggtcgcatttgaatagttgtgc 535

                                                                       
Query: 441 atttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgc 500
           ||||||||| || || || |||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 534 atttttctcttcgtcgtagcccaagaccatagcaactactccaaggggtctcatgtatgc 475

                       
Query: 501 atgctgcgtgta 512
           ||| ||||||||
Sbjct: 474 atgttgcgtgta 463
to top
>gb|BT014031.1| Lycopersicon esculentum clone 133094R, mRNA sequence
          Length = 1053

 Score =  149 bits (75), Expect = 1e-32
 Identities = 243/299 (81%)
 Strand = Plus / Minus

                                                                       
Query: 214 tcttctttcctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaaca 273
           |||||||| ||||||||||| ||||| || ||  | |||||||||||||| |||||||||
Sbjct: 748 tcttcttttctcacaacaccaacctcaatttcactggccttgaaatcttcttgcagaaca 689

                                                                       
Query: 274 gattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatcc 333
           ||||| |  |||||||| |   ||||||||||||| ||||| | ||||   ||| |||  
Sbjct: 688 gattgaagagcagaaatagtggtctgaacagtttcctcataggagaacgcagggttattt 629

                                                                       
Query: 334 ttcattttcttctccagaaaatttattgcttcctgctccttaagtccggcactagttgcc 393
           |||||||||||||||| ||| || ||||| || ||||| |||  ||||||||| || |||
Sbjct: 628 ttcattttcttctccaaaaagttaattgcctcttgctctttagatccggcacttgtagcc 569

                                                                       
Query: 394 ttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctca 453
           || || ||||| || ||||| || |||||||| ||||||||||| |    ||||||||||
Sbjct: 568 ttatgaccaaaaaaatgaccagcagggtcacatttgaagagctggggccctttctcctca 509

                                                                      
Query: 454 tcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgta 512
           |||   ||||  | |||||||||||| |||||||||||||| || |||||||| |||||
Sbjct: 508 tcaatgcccaaaatcatagcaactactccaaggggtctcatataggcatgctgtgtgta 450
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  125 bits (63), Expect = 2e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                           
Query: 140     tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199
               |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 4192401 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 4192460

                                                      
Query: 200     accggaagacacggtcttctttcctcacaacaccgacct 238
                 | ||| ||||| || ||||||||||||||||||||||
Sbjct: 4192461 ctctgaaaacacgatcatctttcctcacaacaccgacct 4192499



 Score =  115 bits (58), Expect = 1e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                           
Query: 301     acagtttcgtcatatgtgaactgcgggctatccttcattttcttctccagaaaatttatt 360
               |||||||| || || | |||||| |||  |||||||||||||||||||||||||||||||
Sbjct: 4192732 acagtttcctcgtaggagaactgtgggtcatccttcattttcttctccagaaaatttatt 4192791

                                                 
Query: 361     gcttcctgctccttaagtccggcactagttgcct 394
               ||||||||||||||||| ||||| ||||||||||
Sbjct: 4192792 gcttcctgctccttaagaccggcgctagttgcct 4192825



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                           
Query: 392     ccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcct 451
               |||| |||||||||||||||||||| |||||||| ||||| || ||||| |||||||| |
Sbjct: 4192978 ccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgagcgtttttctctt 4193037

                                         
Query: 452     catcataacccaggaccatagcaact 477
               | ||||| |||| |||||||||||||
Sbjct: 4193038 cgtcatagcccaagaccatagcaact 4193063



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                           
Query: 235     acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaatgcagaaatcgca 294
               ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 4192583 acctcaatctcggtggccttgaaatcttcctgaagaactgattgcaatgcagaaattgca 4192642

                    
Query: 295     atctg 299
               |||||
Sbjct: 4192643 atctg 4192647



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                               
Query: 57      acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104
               |||||||||| ||||||||||||||||||||||  ||||||| |||||
Sbjct: 4192297 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 4192344



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 476     ctacaccaaggggtctcatgtatgcatgctgcgtgta 512
               |||| |||||||| |||||||| ||||||||||||||
Sbjct: 4193180 ctactccaaggggcctcatgtaggcatgctgcgtgta 4193216
to top
>emb|Y16644.1|NTY16644 Nicotiana tabacum mRNA for proteasome A-type subunit
          Length = 1035

 Score =  125 bits (63), Expect = 2e-25
 Identities = 240/299 (80%)
 Strand = Plus / Minus

                                                                       
Query: 214 tcttctttcctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaaca 273
           ||||||||| |||||||||| ||||| || ||  | ||||| ||||| || ||||| |||
Sbjct: 739 tcttctttcttcacaacaccaacctcaatttcactggccttaaaatcctcttgcaggaca 680

                                                                       
Query: 274 gattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatcc 333
           ||||| |  |||||||| ||| ||||||||||||| ||||| | |||    |||  ||  
Sbjct: 679 gattgaagagcagaaattgcagtctgaacagtttcctcataggagaaagcagggtcattt 620

                                                                       
Query: 334 ttcattttcttctccagaaaatttattgcttcctgctccttaagtccggcactagttgcc 393
           |||||||||||||||| |||||| ||||| || || || |||  ||| ||||| || |||
Sbjct: 619 ttcattttcttctccaaaaaattaattgcctcttgttctttagatccagcacttgtagcc 560

                                                                       
Query: 394 ttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctca 453
           || || ||||| || ||||| || |||||||||||||||||||| |    ||||||||||
Sbjct: 559 ttatgaccaaaaaaatgaccagcagggtcacacttgaagagctggggtcctttctcctca 500

                                                                      
Query: 454 tcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgta 512
           |||   ||||  | |||||||||||| |||||||||||||| || |||||||| |||||
Sbjct: 499 tcaatgcccaaaatcatagcaactactccaaggggtctcatataggcatgctgtgtgta 441
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  125 bits (63), Expect = 2e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                           
Query: 140     tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199
               |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 4192510 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 4192569

                                                      
Query: 200     accggaagacacggtcttctttcctcacaacaccgacct 238
                 | ||| ||||| || ||||||||||||||||||||||
Sbjct: 4192570 ctctgaaaacacgatcatctttcctcacaacaccgacct 4192608



 Score =  115 bits (58), Expect = 1e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                           
Query: 301     acagtttcgtcatatgtgaactgcgggctatccttcattttcttctccagaaaatttatt 360
               |||||||| || || | |||||| |||  |||||||||||||||||||||||||||||||
Sbjct: 4192841 acagtttcctcgtaggagaactgtgggtcatccttcattttcttctccagaaaatttatt 4192900

                                                 
Query: 361     gcttcctgctccttaagtccggcactagttgcct 394
               ||||||||||||||||| ||||| ||||||||||
Sbjct: 4192901 gcttcctgctccttaagaccggcgctagttgcct 4192934



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                           
Query: 392     ccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcct 451
               |||| |||||||||||||||||||| |||||||| ||||| || ||||| |||||||| |
Sbjct: 4193087 ccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgagcgtttttctctt 4193146

                                         
Query: 452     catcataacccaggaccatagcaact 477
               | ||||| |||| |||||||||||||
Sbjct: 4193147 cgtcatagcccaagaccatagcaact 4193172



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                           
Query: 235     acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaatgcagaaatcgca 294
               ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 4192692 acctcaatctcggtggccttgaaatcttcctgaagaactgattgcaatgcagaaattgca 4192751

                    
Query: 295     atctg 299
               |||||
Sbjct: 4192752 atctg 4192756



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                               
Query: 57      acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104
               |||||||||| ||||||||||||||||||||||  ||||||| |||||
Sbjct: 4192406 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 4192453



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 476     ctacaccaaggggtctcatgtatgcatgctgcgtgta 512
               |||| |||||||| |||||||| ||||||||||||||
Sbjct: 4193289 ctactccaaggggcctcatgtaggcatgctgcgtgta 4193325
to top
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score =  125 bits (63), Expect = 2e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                         
Query: 140   tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199
             |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 93038 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 93097

                                                    
Query: 200   accggaagacacggtcttctttcctcacaacaccgacct 238
               | ||| ||||| || ||||||||||||||||||||||
Sbjct: 93098 ctctgaaaacacgatcatctttcctcacaacaccgacct 93136



 Score =  115 bits (58), Expect = 1e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                         
Query: 301   acagtttcgtcatatgtgaactgcgggctatccttcattttcttctccagaaaatttatt 360
             |||||||| || || | |||||| |||  |||||||||||||||||||||||||||||||
Sbjct: 93369 acagtttcctcgtaggagaactgtgggtcatccttcattttcttctccagaaaatttatt 93428

                                               
Query: 361   gcttcctgctccttaagtccggcactagttgcct 394
             ||||||||||||||||| ||||| ||||||||||
Sbjct: 93429 gcttcctgctccttaagaccggcgctagttgcct 93462



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                         
Query: 392   ccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcct 451
             |||| |||||||||||||||||||| |||||||| ||||| || ||||| |||||||| |
Sbjct: 93615 ccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgagcgtttttctctt 93674

                                       
Query: 452   catcataacccaggaccatagcaact 477
             | ||||| |||| |||||||||||||
Sbjct: 93675 cgtcatagcccaagaccatagcaact 93700



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 235   acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaatgcagaaatcgca 294
             ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 93220 acctcaatctcggtggccttgaaatcttcctgaagaactgattgcaatgcagaaattgca 93279

                  
Query: 295   atctg 299
             |||||
Sbjct: 93280 atctg 93284



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 57    acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104
             |||||||||| ||||||||||||||||||||||  ||||||| |||||
Sbjct: 92934 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 92981



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 476   ctacaccaaggggtctcatgtatgcatgctgcgtgta 512
             |||| |||||||| |||||||| ||||||||||||||
Sbjct: 93817 ctactccaaggggcctcatgtaggcatgctgcgtgta 93853
to top
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0076N15, complete sequence
          Length = 134307

 Score =  125 bits (63), Expect = 2e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                         
Query: 140   tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199
             |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 21016 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 21075

                                                    
Query: 200   accggaagacacggtcttctttcctcacaacaccgacct 238
               | ||| ||||| || ||||||||||||||||||||||
Sbjct: 21076 ctctgaaaacacgatcatctttcctcacaacaccgacct 21114



 Score =  115 bits (58), Expect = 1e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                         
Query: 301   acagtttcgtcatatgtgaactgcgggctatccttcattttcttctccagaaaatttatt 360
             |||||||| || || | |||||| |||  |||||||||||||||||||||||||||||||
Sbjct: 21347 acagtttcctcgtaggagaactgtgggtcatccttcattttcttctccagaaaatttatt 21406

                                               
Query: 361   gcttcctgctccttaagtccggcactagttgcct 394
             ||||||||||||||||| ||||| ||||||||||
Sbjct: 21407 gcttcctgctccttaagaccggcgctagttgcct 21440



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                         
Query: 392   ccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcct 451
             |||| |||||||||||||||||||| |||||||| ||||| || ||||| |||||||| |
Sbjct: 21593 ccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgagcgtttttctctt 21652

                                       
Query: 452   catcataacccaggaccatagcaact 477
             | ||||| |||| |||||||||||||
Sbjct: 21653 cgtcatagcccaagaccatagcaact 21678



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 235   acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaatgcagaaatcgca 294
             ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 21198 acctcaatctcggtggccttgaaatcttcctgaagaactgattgcaatgcagaaattgca 21257

                  
Query: 295   atctg 299
             |||||
Sbjct: 21258 atctg 21262



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 57    acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104
             |||||||||| ||||||||||||||||||||||  ||||||| |||||
Sbjct: 20912 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 20959



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 476   ctacaccaaggggtctcatgtatgcatgctgcgtgta 512
             |||| |||||||| |||||||| ||||||||||||||
Sbjct: 21795 ctactccaaggggcctcatgtaggcatgctgcgtgta 21831
to top
>ref|NM_122950.2| Arabidopsis thaliana PAA1; endopeptidase/ peptidase/ threonine
           endopeptidase AT5G35590 (PAA1) mRNA, complete cds
          Length = 1037

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 143/176 (81%)
 Strand = Plus / Minus

                                                                       
Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282
           ||||| ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| 
Sbjct: 711 ctcaccacacctacctcaatctcagtagccttgaagtcttcttgaagaacagattgcaaa 652

                                                                       
Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342
           || || || ||| |||| || ||||| ||| |||||||    ||| | || |||||||||
Sbjct: 651 gccgatatggcagtctgcacggtttcatcaaatgtgaaagatgggttttctttcattttc 592

                                                                   
Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtg 398
           |||||||  ||||| | |||||| || ||||| |  || |||||||||||||||||
Sbjct: 591 ttctccaagaaattgactgcttcttgttccttcataccagcactagttgccttgtg 536



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 445 ttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgc 504
           ||||| ||||||  |||||  |||||||| || || ||||||||||||||||| ||||| 
Sbjct: 489 ttctcttcatcaacacccattaccatagcgacaactccaaggggtctcatgtaagcatgt 430

                   
Query: 505 tgcgtgta 512
           || |||||
Sbjct: 429 tgagtgta 422
to top
>emb|Y13691.1|ATY13691 Arabidopsis thaliana mRNA for proteasome subunit prc1
          Length = 976

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 143/176 (81%)
 Strand = Plus / Minus

                                                                       
Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282
           ||||| ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| 
Sbjct: 659 ctcaccacacctacctcaatctcagtagccttgaagtcttcttgaagaacagattgcaaa 600

                                                                       
Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342
           || || || ||| |||| || ||||| ||| |||||||    ||| | || |||||||||
Sbjct: 599 gccgatatggcagtctgcacggtttcatcaaatgtgaaagatgggttttctttcattttc 540

                                                                   
Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtg 398
           |||||||  ||||| | |||||| || ||||| |  || |||||||||||||||||
Sbjct: 539 ttctccaagaaattgactgcttcttgttccttcataccagcactagttgccttgtg 484



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 445 ttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgc 504
           ||||| ||||||  |||||  |||||||| || || ||||||||||||||||| ||||| 
Sbjct: 437 ttctcttcatcaacacccattaccatagcgacaactccaaggggtctcatgtaagcatgt 378

                   
Query: 505 tgcgtgta 512
           || |||||
Sbjct: 377 tgagtgta 370
to top
>gb|AY114564.1| Arabidopsis thaliana multicatalytic endopeptidase complex alpha
           subunit-like (At5g35590) mRNA, complete cds
          Length = 777

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 143/176 (81%)
 Strand = Plus / Minus

                                                                       
Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282
           ||||| ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| 
Sbjct: 662 ctcaccacacctacctcaatctcagtagccttgaagtcttcttgaagaacagattgcaaa 603

                                                                       
Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342
           || || || ||| |||| || ||||| ||| |||||||    ||| | || |||||||||
Sbjct: 602 gccgatatggcagtctgcacggtttcatcaaatgtgaaagatgggttttctttcattttc 543

                                                                   
Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtg 398
           |||||||  ||||| | |||||| || ||||| |  || |||||||||||||||||
Sbjct: 542 ttctccaagaaattgactgcttcttgttccttcataccagcactagttgccttgtg 487



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 445 ttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgc 504
           ||||| ||||||  |||||  |||||||| || || ||||||||||||||||| ||||| 
Sbjct: 440 ttctcttcatcaacacccattaccatagcgacaactccaaggggtctcatgtaagcatgt 381

                   
Query: 505 tgcgtgta 512
           || |||||
Sbjct: 380 tgagtgta 373
to top
>gb|AY092969.1| Arabidopsis thaliana multicatalytic endopeptidase complex alpha
           subunit-like (At5g35590) mRNA, complete cds
          Length = 1008

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 143/176 (81%)
 Strand = Plus / Minus

                                                                       
Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282
           ||||| ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| 
Sbjct: 711 ctcaccacacctacctcaatctcagtagccttgaagtcttcttgaagaacagattgcaaa 652

                                                                       
Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342
           || || || ||| |||| || ||||| ||| |||||||    ||| | || |||||||||
Sbjct: 651 gccgatatggcagtctgcacggtttcatcaaatgtgaaagatgggttttctttcattttc 592

                                                                   
Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtg 398
           |||||||  ||||| | |||||| || ||||| |  || |||||||||||||||||
Sbjct: 591 ttctccaagaaattgactgcttcttgttccttcataccagcactagttgccttgtg 536



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 445 ttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgc 504
           ||||| ||||||  |||||  |||||||| || || ||||||||||||||||| ||||| 
Sbjct: 489 ttctcttcatcaacacccattaccatagcgacaactccaaggggtctcatgtaagcatgt 430

                   
Query: 505 tgcgtgta 512
           || |||||
Sbjct: 429 tgagtgta 422
to top
>gb|AF043518.1|AF043518 Arabidopsis thaliana 20S proteasome subunit PAA1 (PAA1) mRNA,
           complete cds
          Length = 1029

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                       
Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282
           ||||| ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| 
Sbjct: 716 ctcaccacacctacctcaatctcagtagccttgaagtcttcttgaagaacagattgcaaa 657

                                                 
Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaa 320
           || || || ||| |||| || ||||| ||| |||||||
Sbjct: 656 gccgatatggcagtctgcacggtttcatcaaatgtgaa 619



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 445 ttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgc 504
           ||||| ||||||  |||||  |||||||| || || ||||||||||||||||| ||||| 
Sbjct: 494 ttctcttcatcaacacccattaccatagcgacaactccaaggggtctcatgtaagcatgt 435

                   
Query: 505 tgcgtgta 512
           || |||||
Sbjct: 434 tgagtgta 427
to top
>gb|AF034572.1|AF034572 Glycine max proteasome IOTA subunit mRNA, complete cds
          Length = 994

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 162/205 (79%)
 Strand = Plus / Minus

                                                                       
Query: 235 acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaatgcagaaatcgca 294
           ||||| ||||| || ||||| ||||| ||||| ||||| |||||||  |||||||| |||
Sbjct: 764 acctcaatctcagtggccttaaaatcctcctgaagaactgattgcagggcagaaatggca 705

                                                                       
Query: 295 atctgaacagtttcgtcatatgtgaactgcgggctatccttcattttcttctccagaaaa 354
            ||||||| || || |||||||| ||    |||  || |||||| ||||| ||||  |||
Sbjct: 704 gtctgaaccgtctcctcatatgtaaatgaagggtcattcttcatcttcttttccaagaaa 645

                                                                       
Query: 355 tttattgcttcctgctccttaagtccggcactagttgccttgtgtccaaagaagtgacct 414
           || ||||| || || ||||| | ||| ||||| ||||||||||| |||||| | ||||| 
Sbjct: 644 ttaattgcctcttggtccttcaatccagcacttgttgccttgtgaccaaagtaatgacca 585

                                    
Query: 415 gcggggtcacacttgaagagctgag 439
           || || ||||| ||| | |||||||
Sbjct: 584 gctggatcacatttgtatagctgag 560
to top
>ref|NM_126597.2| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine
           endopeptidase AT2G05840 (PAA2) transcript variant
           AT2G05840.1 mRNA, complete cds
          Length = 1093

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 225/290 (77%)
 Strand = Plus / Minus

                                                                       
Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282
           |||||||| || ||||| || || || || ||||| ||||| || ||||||||||| |  
Sbjct: 778 ctcacaactcccacctcaatttcagttgctttgaagtcttcttgaagaacagattggaga 719

                                                                       
Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342
           || || || ||| |||| || ||||| |||||||||||    ||| | || |||||||||
Sbjct: 718 gcggatatagcagtctgtactgtttcatcatatgtgaaggcagggttttctttcattttc 659

                                                                       
Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtgtcca 402
           |||||||  ||||| | |||||| || || || |  || ||||||||||||||||| || 
Sbjct: 658 ttctccaagaaattgactgcttcttgttctttcataccagcactagttgccttgtgaccg 599

                                                                       
Query: 403 aagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctcatcataaccc 462
            | || || || || |||||||||||| | ||  |||    | |||| ||||||  ||| 
Sbjct: 598 taaaaatgtccagctgggtcacacttgtaaagtagaggtcctctctcttcatcaatacct 539

                                                             
Query: 463 aggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgta 512
           || ||||| |||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 538 agaaccatggcaactactccaaggggtctcatgtaagcatgttgtgtgta 489
to top
>gb|AY143829.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds
          Length = 741

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 225/290 (77%)
 Strand = Plus / Minus

                                                                       
Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282
           |||||||| || ||||| || || || || ||||| ||||| || ||||||||||| |  
Sbjct: 662 ctcacaactcccacctcaatttcagttgctttgaagtcttcttgaagaacagattggaga 603

                                                                       
Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342
           || || || ||| |||| || ||||| |||||||||||    ||| | || |||||||||
Sbjct: 602 gcggatatagcagtctgtactgtttcatcatatgtgaaggcagggttttctttcattttc 543

                                                                       
Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtgtcca 402
           |||||||  ||||| | |||||| || || || |  || ||||||||||||||||| || 
Sbjct: 542 ttctccaagaaattgactgcttcttgttctttcataccagcactagttgccttgtgaccg 483

                                                                       
Query: 403 aagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctcatcataaccc 462
            | || || || || |||||||||||| | ||  |||    | |||| ||||||  ||| 
Sbjct: 482 taaaaatgtccagctgggtcacacttgtaaagtagaggtcctctctcttcatcaatacct 423

                                                             
Query: 463 aggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgta 512
           || ||||| |||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 422 agaaccatggcaactactccaaggggtctcatgtaagcatgttgtgtgta 373
to top
>gb|AY052679.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds
          Length = 1014

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 225/290 (77%)
 Strand = Plus / Minus

                                                                       
Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282
           |||||||| || ||||| || || || || ||||| ||||| || ||||||||||| |  
Sbjct: 721 ctcacaactcccacctcaatttcagttgctttgaagtcttcttgaagaacagattggaga 662

                                                                       
Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342
           || || || ||| |||| || ||||| |||||||||||    ||| | || |||||||||
Sbjct: 661 gcggatatagcagtctgtactgtttcatcatatgtgaaggcagggttttctttcattttc 602

                                                                       
Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtgtcca 402
           |||||||  ||||| | |||||| || || || |  || ||||||||||||||||| || 
Sbjct: 601 ttctccaagaaattgactgcttcttgttctttcataccagcactagttgccttgtgaccg 542

                                                                       
Query: 403 aagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctcatcataaccc 462
            | || || || || |||||||||||| | ||  |||    | |||| ||||||  ||| 
Sbjct: 541 taaaaatgtccagctgggtcacacttgtaaagtagaggtcctctctcttcatcaatacct 482

                                                             
Query: 463 aggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgta 512
           || ||||| |||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 481 agaaccatggcaactactccaaggggtctcatgtaagcatgttgtgtgta 432
to top
>gb|AF043519.1|AF043519 Arabidopsis thaliana 20S proteasome subunit PAA2 (PAA2) mRNA,
           complete cds
          Length = 1113

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 225/290 (77%)
 Strand = Plus / Minus

                                                                       
Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282
           |||||||| || ||||| || || || || ||||| ||||| || ||||||||||| |  
Sbjct: 778 ctcacaactcccacctcaatttcagttgctttgaagtcttcttgaagaacagattggaga 719

                                                                       
Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342
           || || || ||| |||| || ||||| |||||||||||    ||| | || |||||||||
Sbjct: 718 gcggatatagcagtctgtactgtttcatcatatgtgaaggcagggttttctttcattttc 659

                                                                       
Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtgtcca 402
           |||||||  ||||| | |||||| || || || |  || ||||||||||||||||| || 
Sbjct: 658 ttctccaagaaattgactgcttcttgttctttcataccagcactagttgccttgtgaccg 599

                                                                       
Query: 403 aagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctcatcataaccc 462
            | || || || || |||||||||||| | ||  |||    | |||| ||||||  ||| 
Sbjct: 598 taaaaatgtccagctgggtcacacttgtaaagtagaggtcctctctcttcatcaatacct 539

                                                             
Query: 463 aggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgta 512
           || ||||| |||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 538 agaaccatggcaactactccaaggggtctcatgtaagcatgttgtgtgta 489
to top
>ref|NM_001036263.1| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine
           endopeptidase AT2G05840 (PAA2) transcript variant
           AT2G05840.2 mRNA, complete cds
          Length = 1114

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 202/260 (77%)
 Strand = Plus / Minus

                                                                       
Query: 253 ttgaaatcttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtca 312
           ||||| ||||| || ||||||||||| |  || || || ||| |||| || ||||| |||
Sbjct: 766 ttgaagtcttcttgaagaacagattggagagcggatatagcagtctgtactgtttcatca 707

                                                                       
Query: 313 tatgtgaactgcgggctatccttcattttcttctccagaaaatttattgcttcctgctcc 372
           ||||||||    ||| | || ||||||||||||||||  ||||| | |||||| || || 
Sbjct: 706 tatgtgaaggcagggttttctttcattttcttctccaagaaattgactgcttcttgttct 647

                                                                       
Query: 373 ttaagtccggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaag 432
           || |  || ||||||||||||||||| ||  | || || || || |||||||||||| | 
Sbjct: 646 ttcataccagcactagttgccttgtgaccgtaaaaatgtccagctgggtcacacttgtaa 587

                                                                       
Query: 433 agctgagcatttttctcctcatcataacccaggaccatagcaactacaccaaggggtctc 492
           ||  |||    | |||| ||||||  ||| || ||||| |||||||| ||||||||||||
Sbjct: 586 agtagaggtcctctctcttcatcaatacctagaaccatggcaactactccaaggggtctc 527

                               
Query: 493 atgtatgcatgctgcgtgta 512
           ||||| ||||| || |||||
Sbjct: 526 atgtaagcatgttgtgtgta 507
to top
>dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2K18
          Length = 41465

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 235   acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaa 281
             ||||| ||||| ||||||||||| ||||| || ||||||||||||||
Sbjct: 16954 acctcaatctcagtagccttgaagtcttcttgaagaacagattgcaa 17000



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                         
Query: 334   ttcattttcttctccagaaaatttattgcttcctgctccttaagtccggcactagttgcc 393
             ||||||||||||||||  ||||| | |||||| || ||||| |  || ||||||||||||
Sbjct: 17230 ttcattttcttctccaagaaattgactgcttcttgttccttcataccagcactagttgcc 17289

              
Query: 394   t 394
             |
Sbjct: 17290 t 17290



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 481   ccaaggggtctcatgtatgcatgctgcgtgta 512
             ||||||||||||||||| ||||| || |||||
Sbjct: 18264 ccaaggggtctcatgtaagcatgttgagtgta 18295
to top
>emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on chromosome 1 Contains a
            novel pseudogene, a farnesyl diphosphate synthase
            (farnesyl pyrophosphate synthetase,
            dimethylallyltranstransferase, geranyltranstransferase)
            (FDPS) pseudogene, a novel gene (LOC339476) and the 5'
            end of a solute carrier family 4 (anion exchanger) member
            1 adaptor protein (SLC4A1AP) pseudogene, complete
            sequence
          Length = 190912

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 267  cagaacagattgcaatgcagaaa 289
            |||||||||||||||||||||||
Sbjct: 2202 cagaacagattgcaatgcagaaa 2224
to top
>gb|AC098969.2| Homo sapiens chromosome 3 clone RP11-24O17, complete sequence
          Length = 158560

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 63    aatgattcactgaatgtttctt 84
             ||||||||||||||||||||||
Sbjct: 23257 aatgattcactgaatgtttctt 23236
to top
>gb|AC156556.8| Mus musculus chromosome 7, clone RP23-92E8, complete sequence
          Length = 250903

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 354    atttattgcttcctgctcctt 374
              |||||||||||||||||||||
Sbjct: 125633 atttattgcttcctgctcctt 125613
to top
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete
             sequence
          Length = 121160

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 476   ctacaccaaggggtctcatgtatgcatgctgcgtgta 512
             |||| ||||||||||||||||| ||||| || |||||
Sbjct: 18849 ctactccaaggggtctcatgtaagcatgttgtgtgta 18813
to top
>gb|AC022039.7| Homo sapiens chromosome 8, clone RP11-3G21, complete sequence
          Length = 176815

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 336    cattttcttctccagaaaatt 356
              |||||||||||||||||||||
Sbjct: 108314 cattttcttctccagaaaatt 108294
to top
>gb|AC098818.3| Homo sapiens BAC clone RP11-109G23 from 4, complete sequence
          Length = 216451

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 92    catgaaacaaaataacagtttatgg 116
             |||||| ||||||||||||||||||
Sbjct: 59272 catgaagcaaaataacagtttatgg 59296
to top
>dbj|AP003471.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1552D7
          Length = 160912

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 256    aaatcttcctgcagaacagat 276
              |||||||||||||||||||||
Sbjct: 125199 aaatcttcctgcagaacagat 125219
to top
>dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1742H10
          Length = 155723

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 256   aaatcttcctgcagaacagat 276
             |||||||||||||||||||||
Sbjct: 44355 aaatcttcctgcagaacagat 44375
to top
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence
          Length = 205378

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   ccaggaccatagcaactaca 480
             ||||||||||||||||||||
Sbjct: 70415 ccaggaccatagcaactaca 70434
to top
>gb|BC079919.1| Xenopus laevis MGC78853 protein, mRNA (cDNA clone MGC:78853
            IMAGE:3403020), complete cds
          Length = 3476

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   tgattcactgaatgtttctt 84
            ||||||||||||||||||||
Sbjct: 1751 tgattcactgaatgtttctt 1732
to top
>gb|AC161289.2| Pan troglodytes BAC clone CH251-170B19 from chromosome 7, complete
             sequence
          Length = 151213

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   ttcattttcttctccagaaa 353
             ||||||||||||||||||||
Sbjct: 83638 ttcattttcttctccagaaa 83619
to top
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome
          Length = 1044459

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   ctgagcatttttctcctcat 454
             ||||||||||||||||||||
Sbjct: 63215 ctgagcatttttctcctcat 63234
to top
>gb|AC183672.2| Pan troglodytes BAC clone CH251-546K4 from chromosome 7, complete
             sequence
          Length = 231124

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   ttcattttcttctccagaaa 353
             ||||||||||||||||||||
Sbjct: 56287 ttcattttcttctccagaaa 56306
to top
>gb|AC122418.4| Mus musculus BAC clone RP24-159E6 from chromosome 13, complete sequence
          Length = 221980

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 326    ggctatccttcattttcttc 345
              ||||||||||||||||||||
Sbjct: 220530 ggctatccttcattttcttc 220511
to top
>gb|AC146024.3| Pan troglodytes BAC clone RP43-119C21 from 7, complete sequence
          Length = 139947

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   ttcattttcttctccagaaa 353
             ||||||||||||||||||||
Sbjct: 59626 ttcattttcttctccagaaa 59645
to top
>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     atgaaacaaaataacagttt 112
              ||||||||||||||||||||
Sbjct: 101716 atgaaacaaaataacagttt 101697
to top
>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     atgaaacaaaataacagttt 112
              ||||||||||||||||||||
Sbjct: 103233 atgaaacaaaataacagttt 103214
to top
>gb|AC004128.1| Homo sapiens PAC clone RP5-850G1 from 7, complete sequence
          Length = 93904

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 334  ttcattttcttctccagaaa 353
            ||||||||||||||||||||
Sbjct: 7858 ttcattttcttctccagaaa 7839
to top
>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     atgaaacaaaataacagttt 112
              ||||||||||||||||||||
Sbjct: 135142 atgaaacaaaataacagttt 135161
to top
>gb|AC183922.3| Pan troglodytes BAC clone CH251-344F10 from chromosome unknown, complete
              sequence
          Length = 146184

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    ttcattttcttctccagaaa 353
              ||||||||||||||||||||
Sbjct: 143853 ttcattttcttctccagaaa 143872
to top
>emb|BX321911.6| Mouse DNA sequence from clone RP23-255M6 on chromosome 11 Contains a
             ribosomal protein L22 (Rpl22) pseudogene, complete
             sequence
          Length = 56399

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aatgattcactgaatgtttc 82
             ||||||||||||||||||||
Sbjct: 22547 aatgattcactgaatgtttc 22566
to top
>gb|AY128534.1| Homo sapiens cyclin-dependent kinase 6 (CDK6) gene, complete cds
          Length = 220803

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    ttcattttcttctccagaaa 353
              ||||||||||||||||||||
Sbjct: 137943 ttcattttcttctccagaaa 137962
to top
>gb|AC161266.2| Mus musculus BAC clone RP23-231B13 from chromosome 13, complete sequence
          Length = 190192

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    ggctatccttcattttcttc 345
              ||||||||||||||||||||
Sbjct: 129910 ggctatccttcattttcttc 129929
to top
>gb|AC149040.2| Medicago truncatula chromosome 7 BAC clone mth2-9f22, complete sequence
          Length = 120423

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   acagattgcaatgcagaaat 290
             ||||||||||||||||||||
Sbjct: 55920 acagattgcaatgcagaaat 55901
to top
>gb|AC092598.2| Homo sapiens BAC clone RP11-114B11 from 2, complete sequence
          Length = 164798

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   attgcttcctgctccttaag 377
             ||||||||||||||||||||
Sbjct: 40377 attgcttcctgctccttaag 40358
to top
>ref|XM_574455.1| PREDICTED: Rattus norvegicus similar to hypothetical protein
           (LOC499157), mRNA
          Length = 1040

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 242 tctcggtagccttgaaatcttcct 265
           ||||||||||||||||| ||||||
Sbjct: 92  tctcggtagccttgaaaccttcct 69
to top
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome
          Length = 1042519

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   ctgagcatttttctcctcat 454
             ||||||||||||||||||||
Sbjct: 62490 ctgagcatttttctcctcat 62509
to top
>gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, complete sequence
          Length = 184453

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   ccaggaccatagcaactaca 480
             ||||||||||||||||||||
Sbjct: 24184 ccaggaccatagcaactaca 24165
to top
>gb|AC154868.3| Monodelphis domestica, clone XX-211C4, complete sequence
          Length = 129158

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aatgattcactgaatgtttc 82
             ||||||||||||||||||||
Sbjct: 41089 aatgattcactgaatgtttc 41070
to top
>gb|AC133955.4| Mus musculus BAC clone RP23-249M4 from 6, complete sequence
          Length = 185272

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 389    ttgccttgtgtccaaagaag 408
              ||||||||||||||||||||
Sbjct: 100118 ttgccttgtgtccaaagaag 100137


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,114,099
Number of Sequences: 3902068
Number of extensions: 5114099
Number of successful extensions: 130685
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130482
Number of HSP's gapped (non-prelim): 186
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top