ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19k19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PPDK_RICPR (Q9ZD55) Pyruvate, phosphate dikinase (EC 2.7.9.1) (P... 31 4.0
2RGS3_HUMAN (P49796) Regulator of G-protein signaling 3 (RGS3) (R... 30 8.8

>PPDK_RICPR (Q9ZD55) Pyruvate, phosphate dikinase (EC 2.7.9.1) (Pyruvate,|
           orthophosphate dikinase)
          Length = 880

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 205 KNLKMMKL*PATMHHQTLSSGHHLHSVLQHQQCRCGIQQP 324
           KNL      P +M HQ L + H ++ +L H+ CR GI  P
Sbjct: 640 KNLANSLNLPLSMIHQRLHAMHEVNPMLGHRGCRLGICLP 679



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>RGS3_HUMAN (P49796) Regulator of G-protein signaling 3 (RGS3) (RGP3)|
          Length = 1198

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -3

Query: 400  IDAVLGRKSGAENVESSQEMSVEEAQVVESHTDTVGAAEQNEGDDQKKESGDA 242
            +D+   +K+GAE   S  E   EEA+ VE   +     +++  DD   E  +A
Sbjct: 861  LDSTYSQKAGAEQGCSGDEEDAEEAEEVEEGEEGEEDEDEDTSDDNYGERSEA 913


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,465,097
Number of Sequences: 219361
Number of extensions: 1068680
Number of successful extensions: 2318
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2313
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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