>MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (Ubiquinol-cytochrome-c reductase subunit II) (EC
           1.10.2.2)
          Length = 504

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 40/73 (54%), Positives = 57/73 (78%)
 Frame = -2

Query: 554 SKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSV 375
           S+   +ED+GRQ L +GER PVE  LKA+DA++  D+++V  K+ISSPLTMAS+G+VLS+
Sbjct: 432 SRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLISSPLTMASYGDVLSL 491

Query: 374 PAYETVRGKFSSK 336
           P+Y+ V  +F SK
Sbjct: 492 PSYDAVSSRFRSK 504

>MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase alpha subunit|
           1, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 1)
          Length = 503

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 38/70 (54%), Positives = 53/70 (75%)
 Frame = -2

Query: 554 SKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSV 375
           S+    ED+GRQ L +GERKPV+Q LK+VD +TL D++   +K+IS PLTM S G+VL+V
Sbjct: 433 SRMIAAEDIGRQILTYGERKPVDQFLKSVDQLTLKDIADFTSKVISKPLTMGSFGDVLAV 492

Query: 374 PAYETVRGKF 345
           P+Y+T+  KF
Sbjct: 493 PSYDTISSKF 502

>MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase alpha subunit|
           2, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 2)
          Length = 499

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 36/70 (51%), Positives = 53/70 (75%)
 Frame = -2

Query: 554 SKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSV 375
           S+    ED+GRQ L +GERKPV+Q LK VD +TL D++   +K+I+ PLTMA+ G+VL+V
Sbjct: 429 SRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSKVITKPLTMATFGDVLNV 488

Query: 374 PAYETVRGKF 345
           P+Y++V  +F
Sbjct: 489 PSYDSVSKRF 498

>MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 525

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 24/69 (34%), Positives = 38/69 (55%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETV 357
           ED+GRQ LA   RK   +L   +  +   DV  VA+K++     +A+ G++  +P YE +
Sbjct: 447 EDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHI 506

Query: 356 RGKFSSK*G 330
           +   SSK G
Sbjct: 507 QTALSSKDG 515

>MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 525

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 24/69 (34%), Positives = 38/69 (55%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETV 357
           ED+GRQ LA   RK   +L   +  +   DV  VA+K++     +A+ G++  +P YE +
Sbjct: 447 EDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHI 506

Query: 356 RGKFSSK*G 330
           +   SSK G
Sbjct: 507 QTALSSKDG 515

>MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 466

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -2

Query: 545 STTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII-SSPLTMASHGNVLSVPA 369
           +  ED+GRQ +  G+R    Q+  AVDA+++ D+  VA K +      +A+ GN+  +  
Sbjct: 394 AVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRVAQKYLWDKDFALAAFGNIDGLKD 453

Query: 368 YETVRGKFSS 339
           Y  +R   SS
Sbjct: 454 YGRIRNDMSS 463

>MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 524

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 22/69 (31%), Positives = 38/69 (55%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETV 357
           ED+GRQ LA   RK   +L   +  +   D+  VA+K++     +A+ G++  +P YE +
Sbjct: 446 EDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHI 505

Query: 356 RGKFSSK*G 330
           +   SS+ G
Sbjct: 506 QAALSSRDG 514

>MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 524

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 22/69 (31%), Positives = 38/69 (55%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETV 357
           ED+GRQ LA   RK   +L   +  +   D+  VA+K++     +A+ G++  +P YE +
Sbjct: 446 EDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHI 505

Query: 356 RGKFSSK*G 330
           +   SS+ G
Sbjct: 506 QAALSSRNG 514

>UQCR2_BOVIN (P23004) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 453

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 21/55 (38%), Positives = 32/55 (58%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372
           +++G QALA G   P   +L+ +DA+  ADV   A K +S   +MA+ GN+   P
Sbjct: 394 DEVGSQALAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRKSMAASGNLGHTP 448

>MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 482

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = -2

Query: 554 SKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSV 375
           SK    EDMGRQ L  G + PV +++  ++ +   D+S VA  I +  +  A +G   + 
Sbjct: 384 SKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNNAGNGKGRAT 443

Query: 374 PAYETVRGKF 345
              +  RG F
Sbjct: 444 VVMQGDRGSF 453

>UQCR2_HUMAN (P22695) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 453

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372
           E++G QAL  G   P   +L+ +D++  AD+   A K +S   +MA+ GN+   P
Sbjct: 394 EEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMAASGNLGHTP 448

>MPPB_BLAEM (Q00302) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
           (BeMPP1)
          Length = 465

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII-SSPLTMASHGNVLSVPAYET 360
           E++GRQ LA+G R    ++ + VDA+T+ DV  VA + I    L + + G V  +P Y  
Sbjct: 396 EEIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANEFIYDRDLAIVAVGPVECLPDYNR 455

Query: 359 VR 354
           +R
Sbjct: 456 IR 457

>MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 531

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAK-IISSPLTMASHGNVLSVPAYET 360
           ED+GRQ L +G R P  +L   +DA+  + V  VA K I    + +++ G +  +P Y  
Sbjct: 462 EDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYNK 521

Query: 359 VR 354
            R
Sbjct: 522 FR 523

>UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 453

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 20/54 (37%), Positives = 31/54 (57%)
 Frame = -2

Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372
           ++G QALA G   P   +L+ +D++  ADV   A K +S   +MA+ GN+   P
Sbjct: 395 EIGSQALAAGSYMPPSTVLQQIDSVADADVVKAAKKFVSGKKSMAASGNLGHTP 448

>UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 452

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 20/54 (37%), Positives = 31/54 (57%)
 Frame = -2

Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372
           ++G QALA G   P   +L+ +DA+  ADV   A K +S   +M + GN+ + P
Sbjct: 394 EIGSQALATGSYMPPPTVLQQIDAVADADVVKAAKKFVSGKKSMTASGNLGNTP 447

>MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 474

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 21/59 (35%), Positives = 34/59 (57%)
 Frame = -2

Query: 554 SKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLS 378
           S+  T ED+GRQ LA  +R    +L+  + A+T  D+  VA  +++ P TM + G  L+
Sbjct: 383 SQVITVEDIGRQVLAQNQRLEPLELVNNISAVTRDDLVRVAEALVAKPPTMVAVGEDLT 441

>MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP)
          Length = 462

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVA-AKIISSPLTMASHGNVLSVPAYET 360
           ED+GRQ +  G+R   E++ + VD IT  D+   A  ++ + P++M + GN  +VP    
Sbjct: 396 EDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRLQNKPVSMVALGNTSTVPNVSY 455

Query: 359 VRGKFS 342
           +  K +
Sbjct: 456 IEEKLN 461

>MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 577

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = -2

Query: 554 SKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 387
           S+    ED+GRQ    G + PV ++ + ++ +T+ D+  VA +++      A  G+
Sbjct: 485 SRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRVAKRVVGGMANNAGQGS 540

>MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYE 363
           ED+GRQ L +  R P+ +L   +DA+    +  V  K I   SP  +A+ G +  +P ++
Sbjct: 420 EDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIAAVGPIKQLPDFK 478

Query: 362 TVR 354
            +R
Sbjct: 479 QIR 481

>MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
           (Ubiquinol-cytochrome-c reductase complex core protein
           I) (EC 1.10.2.2)
          Length = 476

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = -2

Query: 545 STTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVA-AKIISSPLTMASHGNVLSVPA 369
           +  ED+GRQ +  G R    ++ + +DA++  DV   A  KI    + +++ G++  +  
Sbjct: 404 AVAEDIGRQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKIWDQDIAISAVGSIEGLFD 463

Query: 368 YETVRGKFS 342
           Y  +RG  S
Sbjct: 464 YARIRGDMS 472

>UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 494

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII 420
           +D+GRQ L+FG R P+    + +DAI+  D+  V  +++
Sbjct: 407 DDIGRQVLSFGARVPLASFFEQLDAISREDLIRVGPRVL 445

>MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP)
          Length = 457

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = -2

Query: 554 SKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII-SSPLTMASHGNVLS 378
           S  +  ED+GRQ L  G R   +++   +  IT  DV+ VA+++I    + +++ G++  
Sbjct: 382 STTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARVASEMIWDKDIAVSAVGSIEG 441

Query: 377 VPAYETVRGKFS 342
           +  Y  +R   S
Sbjct: 442 LLDYNRIRSSIS 453

>MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 489

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYE 363
           ED+GRQ L +  R P+ +L   +DA+    +  V  K I   SP  +A+ G +  +P ++
Sbjct: 420 EDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIAAVGPIEQLPDFK 478

Query: 362 TV 357
            +
Sbjct: 479 QI 480

>MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYE 363
           ED+GRQ L +  R P+ +L   +DA+    V  V  K I   SP  +A+ G +  +P + 
Sbjct: 420 EDIGRQMLCYNRRIPIPELEARIDAVDAETVRRVCTKYIHDKSP-AIAALGPIERLPDFN 478

Query: 362 TV 357
            +
Sbjct: 479 QI 480

>MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 490

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYE 363
           ED+GRQ L +  R P+ +L   +DA+    +  V  K I   SP  +A+ G +  +P + 
Sbjct: 421 EDIGRQMLCYNRRIPIPELEARIDAVNAEIIREVCTKYIYDKSP-AVAAVGPIEQLPDFN 479

Query: 362 TV 357
            +
Sbjct: 480 QI 481

>MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -2

Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYE 363
           ED+GRQ L +  R P+ +L   +DA+    V  V  K I   SP  +A+ G +  +P + 
Sbjct: 420 EDIGRQMLCYNRRIPIPELEARIDAVDAEMVREVCTKYIYGKSP-AIAALGPIERLPDFN 478

Query: 362 TV 357
            +
Sbjct: 479 QI 480

>PDR14_ARATH (Q7PC82) Probable pleiotropic drug resistance protein 14|
          Length = 1392

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -2

Query: 533  DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMAS 396
            DM ++ LAFGE+K V   L+         ++ VA  +I+ P+ +AS
Sbjct: 1333 DMEKEILAFGEKKKVSDFLEDYFGYRYDSLALVAVVLIAFPILLAS 1378

>PDR15_ARATH (Q7PC81) Putative pleiotropic drug resistance protein 15|
          Length = 1390

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -2

Query: 533  DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMAS 396
            DM ++ LAFGE+K V   L+         ++ VA  +I+ P+ +AS
Sbjct: 1331 DMEKEILAFGEKKKVSAFLEDYFGYRYDSLALVAVVLIAFPILLAS 1376

>TENA_CHICK (P10039) Tenascin precursor (TN) (Hexabrachion) (Cytotactin)|
           (Neuronectin) (GMEM) (JI) (Miotendinous antigen)
           (Glioma-associated-extracellular matrix antigen) (GP
           150-225)
          Length = 1808

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -1

Query: 498 ETCGAASKGC*CYNSGRCIN--CCCEDHLITIDNG 400
           E CG       C+N GRCIN  C C++  I  D G
Sbjct: 402 EDCGELRCPNDCHNRGRCINGQCVCDEGFIGEDCG 436


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,693,185
Number of Sequences: 219361
Number of extensions: 1579529
Number of successful extensions: 4829
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4827
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)