ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19j23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY736126.1| Triticum aestivum cytoplasmatic ribosomal protein... 129 5e-27
2gb|AY105726.1| Zea mays PCO090232 mRNA sequence 92 1e-15
3ref|XM_479793.1| Oryza sativa (japonica cultivar-group), mRNA 90 4e-15
4ref|XM_507561.1| PREDICTED Oryza sativa (japonica cultivar-group... 90 4e-15
5ref|XM_507099.2| PREDICTED Oryza sativa (japonica cultivar-group... 90 4e-15
6emb|AJ417519.1|OSA417519 Oryza sativa partial mRNA for cytoplasm... 90 4e-15
7dbj|AK104147.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 4e-15
8dbj|AK058822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 4e-15
9gb|BT017933.1| Zea mays clone EL01N0520D05.c mRNA sequence 82 1e-12
10emb|X62455.1|ZMS13 Z.mays S13 mRNA for cytoplasmic ribosomal pro... 82 1e-12
11dbj|AK059505.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 1e-12
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 70 4e-09
13dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic D... 70 4e-09
14ref|NM_115941.2| Arabidopsis thaliana structural constituent of ... 66 7e-08
15gb|AY090366.1| Arabidopsis thaliana AT3g60770/T4C21_180 mRNA, co... 66 7e-08
16gb|AY056088.1| Arabidopsis thaliana AT3g60770/T4C21_180 mRNA, co... 66 7e-08
17gb|AY052731.1| Arabidopsis thaliana AT3g60770/T4C21_180 mRNA, co... 66 7e-08
18gb|AF380636.1|AF380636 Arabidopsis thaliana AT3g60770/T4C21_180 ... 66 7e-08
19gb|AF378861.1|AF378861 Arabidopsis thaliana AT3g60770/T4C21_180 ... 66 7e-08
20emb|BX823053.1|CNS0A76V Arabidopsis thaliana Full-length cDNA Co... 66 7e-08
21ref|XM_479792.1| Oryza sativa (japonica cultivar-group), mRNA 64 3e-07
22gb|AY618066.1| Sterkiella histriomuscorum clone UGC1O0003_I11_R ... 46 0.060
23gb|AY617889.1| Sterkiella histriomuscorum clone UGC1O0006_D09_R ... 46 0.060
24ref|XM_368895.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 46 0.060
25ref|NM_116227.2| Arabidopsis thaliana ATRPS13A (RIBOSOMAL PROTEI... 44 0.24
26ref|XM_958950.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.24
27ref|XM_330224.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.24
28ref|XM_659191.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.24
29gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.24
30gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.24
31gb|AY057544.1| Arabidopsis thaliana AT4g00100/F6N15_7 mRNA, comp... 44 0.24
32gb|BT006543.1| Arabidopsis thaliana At4g00100 gene, complete cds 44 0.24
33gb|AF370471.1|AF370471 Arabidopsis thaliana similar to ribosomal... 44 0.24
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.24
35emb|BX827841.1|CNS0A317 Arabidopsis thaliana Full-length cDNA Co... 44 0.24
36emb|BX827751.1|CNS0A2ZZ Arabidopsis thaliana Full-length cDNA Co... 44 0.24
37emb|BX828001.1|CNS0A29T Arabidopsis thaliana Full-length cDNA Co... 44 0.24
38gb|AY088038.1| Arabidopsis thaliana clone 4058 mRNA, complete se... 44 0.24
39dbj|AB031739.1| Arabidopsis thaliana AtRPS13A mRNA for cytoplasm... 44 0.24
40ref|XM_448067.1| Candida glabrata CBS138, CAGL0J08250g partial mRNA 42 0.94
41gb|AY050961.1| Arabidopsis thaliana At2g46830 mRNA sequence 42 0.94
42emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp... 42 0.94
43gb|AC005310.3| Arabidopsis thaliana chromosome 2 clone F19D11 ma... 42 0.94
44gb|U79156.1|ATU79156 Arabidopsis thaliana Myb-related transcript... 42 0.94
45dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
46emb|BX820657.1|CNS0A7YQ Arabidopsis thaliana Full-length cDNA Co... 42 0.94
47dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
48dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
49gb|AC093481.8| Mus musculus chromosome 18, clone RP23-62E19, com... 40 3.7
50gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome... 40 3.7
51gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome... 40 3.7
52gb|AY453393.1| Glycine max ribosomal protein S13 (RPS13) mRNA, c... 40 3.7
53ref|XM_387224.1| Gibberella zeae PH-1 chromosome 4 RS13_XENLA 40... 40 3.7
54gb|AC087430.3| Homo sapiens chromosome 3 clone RP11-242C8 map 3p... 40 3.7
55gb|BC056028.1| Xenopus laevis ribosomal protein S13, mRNA (cDNA ... 40 3.7
56gb|AC109619.11| Mus musculus chromosome 19, clone RP23-427F6, co... 40 3.7
57ref|XM_505270.1| Yarrowia lipolytica CLIB122, YALI0F11055g predi... 40 3.7
58emb|AL356754.18| Human DNA sequence from clone RP11-11C5 on chro... 40 3.7
59emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic D... 40 3.7
60ref|NM_001016602.2| Xenopus tropicalis ribosomal protein S13 (rp... 40 3.7
61gb|AC097511.1| Homo sapiens BAC clone RP11-393A12 from 4, comple... 40 3.7
62dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
63dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
64gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa004... 40 3.7
65gb|AC016955.15| Homo sapiens 3 BAC RP11-21I16 (Roswell Park Canc... 40 3.7
66dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
67dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
68gb|AC157908.5| Mus musculus chromosome 18, clone RP24-286P2, com... 40 3.7
69dbj|AP005051.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
70emb|CR760551.2| Xenopus tropicalis finished cDNA, clone TEgg034k23 40 3.7
71gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.7
72emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 3.7 
>gb|AY736126.1| Triticum aestivum cytoplasmatic ribosomal protein S13 mRNA,
           complete cds
          Length = 494

 Score =  129 bits (65), Expect = 5e-27
 Identities = 71/73 (97%)
 Strand = Plus / Minus

                                                                       
Query: 207 cctcctaagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagct 266
           ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 494 cctcctaagccaccagagtgctggcagtggcagactcgtacttccaggtgggcgggagct 435

                        
Query: 267 tcttggtgcgctt 279
           |||||||||||||
Sbjct: 434 tcttggtgcgctt 422
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>gb|AY105726.1| Zea mays PCO090232 mRNA sequence
          Length = 775

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 38  cagacagaactgcaaaaccaaaaatggtttatgggattctccgagtaaacatagaaaa 95
           ||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 722 cagacagaattgcgaaaccaaaaatggtttatgggattctccaagtaaacatagaaaa 665



 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                       
Query: 215 gccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttggtg 274
           |||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 549 gccaccagagtgctcgccgtggttgactcgtacttccaggtgggtgggagcttcttggta 490

                
Query: 275 cgctt 279
           |||||
Sbjct: 489 cgctt 485
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>ref|XM_479793.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 663

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                       
Query: 215 gccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttggtg 274
           ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 537 gccaccagagtgctggccgtggttgactcatacttccaggtgggtgggagcttctttgtg 478

                
Query: 275 cgctt 279
           |||||
Sbjct: 477 cgctt 473
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>ref|XM_507561.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470F10.18 mRNA
          Length = 924

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                       
Query: 215 gccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttggtg 274
           ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 537 gccaccagagtgctggccgtggttgactcatacttccaggtgggtgggagcttctttgtg 478

                
Query: 275 cgctt 279
           |||||
Sbjct: 477 cgctt 473



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 38  cagacagaactgcaaaaccaaaaatggtttatgggattctccgagtaaacatagaaaa 95
           ||||||||| ||  |||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 709 cagacagaattgtgaaaccaaaaatggtttataggatcccccgagtaaacatagaaaa 652
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>ref|XM_507099.2| PREDICTED Oryza sativa (japonica cultivar-group), P0470F10.18 mRNA
          Length = 931

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                       
Query: 215 gccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttggtg 274
           ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 541 gccaccagagtgctggccgtggttgactcatacttccaggtgggtgggagcttctttgtg 482

                
Query: 275 cgctt 279
           |||||
Sbjct: 481 cgctt 477



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 38  cagacagaactgcaaaaccaaaaatggtttatgggattctccgagtaaacatagaaaa 95
           ||||||||| ||  |||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 713 cagacagaattgtgaaaccaaaaatggtttataggatcccccgagtaaacatagaaaa 656
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>emb|AJ417519.1|OSA417519 Oryza sativa partial mRNA for cytoplasmatic ribosomal protein S13
           (xd3 gene)
          Length = 347

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                       
Query: 215 gccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttggtg 274
           ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 117 gccaccagagtgctggccgtggttgactcatacttccaggtgggtgggagcttctttgtg 58

                
Query: 275 cgctt 279
           |||||
Sbjct: 57  cgctt 53



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 38  cagacagaactgcaaaaccaaaaatggtttatgggattctccgagtaaacatagaaaa 95
           ||||||||| ||  |||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 289 cagacagaattgtgaaaccaaaaatggtttataggatcccccgagtaaacatagaaaa 232
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>dbj|AK104147.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D07, full
           insert sequence
          Length = 924

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                       
Query: 215 gccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttggtg 274
           ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 537 gccaccagagtgctggccgtggttgactcatacttccaggtgggtgggagcttctttgtg 478

                
Query: 275 cgctt 279
           |||||
Sbjct: 477 cgctt 473



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 38  cagacagaactgcaaaaccaaaaatggtttatgggattctccgagtaaacatagaaaa 95
           ||||||||| ||  |||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 709 cagacagaattgtgaaaccaaaaatggtttataggatcccccgagtaaacatagaaaa 652
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>dbj|AK058822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G11, full
           insert sequence
          Length = 663

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                       
Query: 215 gccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttggtg 274
           ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 537 gccaccagagtgctggccgtggttgactcatacttccaggtgggtgggagcttctttgtg 478

                
Query: 275 cgctt 279
           |||||
Sbjct: 477 cgctt 473
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>gb|BT017933.1| Zea mays clone EL01N0520D05.c mRNA sequence
          Length = 808

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                       
Query: 215 gccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttggtg 274
           |||||||||||||| |||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 543 gccaccagagtgctcgctgtggttgactcatacttccaggtgggtggaagcttctttgtg 484

                
Query: 275 cgctt 279
           |||||
Sbjct: 483 cgctt 479
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>emb|X62455.1|ZMS13 Z.mays S13 mRNA for cytoplasmic ribosomal protein S13
          Length = 717

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                       
Query: 215 gccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttggtg 274
           |||||||||||||| |||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 493 gccaccagagtgctcgctgtggttgactcatacttccaggtgggtggaagcttctttgtg 434

                
Query: 275 cgctt 279
           |||||
Sbjct: 433 cgctt 429
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>dbj|AK059505.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A10, full
           insert sequence
          Length = 940

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                       
Query: 215 gccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttggtg 274
           ||||||||||||||||| ||||| ||||| |||||||||||||| |||||| |||| |||
Sbjct: 550 gccaccagagtgctggccgtggttgactcatacttccaggtgggtgggagcctctttgtg 491

                
Query: 275 cgctt 279
           |||||
Sbjct: 490 cgctt 486



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 38  cagacagaactgcaaaaccaaaaatggtttatgggattctccgagtaaacatagaaaa 95
           ||||||||| ||  |||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 722 cagacagaattgtgaaaccaaaaatggtttataggatcccccgagtaaacatagaaaa 665
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                                 
Query: 245    tacttccaggtgggcgggagcttcttggtgcgctt 279
              |||||||||||||||||||||||||||||||||||
Sbjct: 951493 tacttccaggtgggcgggagcttcttggtgcgctt 951527



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                        
Query: 38     cagacagaactgcaaaaccaaaaatggtttatgggattctccgagtaaacatagaaaa 95
              ||||||||| ||  |||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 956460 cagacagaattgtgaaaccaaaaatggtttataggatcccccgagtaaacatagaaaa 956517



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 245    tacttccaggtgggcgggagcttcttggtgcgctt 279
              |||||||||||||| ||||||||||| ||||||||
Sbjct: 957366 tacttccaggtgggtgggagcttctttgtgcgctt 957400



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 215    gccaccagagtgctggctgtggtagactc 243
              ||||||||||||||||||||||| |||||
Sbjct: 950263 gccaccagagtgctggctgtggtcgactc 950291



 Score = 42.1 bits (21), Expect = 0.94
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 215    gccaccagagtgctggctgtggtagactc 243
              ||||||||||||||||| ||||| |||||
Sbjct: 956632 gccaccagagtgctggccgtggttgactc 956660
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>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470F10
          Length = 185294

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                                 
Query: 245    tacttccaggtgggcgggagcttcttggtgcgctt 279
              |||||||||||||||||||||||||||||||||||
Sbjct: 114231 tacttccaggtgggcgggagcttcttggtgcgctt 114265



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                        
Query: 38     cagacagaactgcaaaaccaaaaatggtttatgggattctccgagtaaacatagaaaa 95
              ||||||||| ||  |||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 119198 cagacagaattgtgaaaccaaaaatggtttataggatcccccgagtaaacatagaaaa 119255



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 245    tacttccaggtgggcgggagcttcttggtgcgctt 279
              |||||||||||||| ||||||||||| ||||||||
Sbjct: 120104 tacttccaggtgggtgggagcttctttgtgcgctt 120138



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 215    gccaccagagtgctggctgtggtagactc 243
              ||||||||||||||||||||||| |||||
Sbjct: 113001 gccaccagagtgctggctgtggtcgactc 113029



 Score = 42.1 bits (21), Expect = 0.94
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 215    gccaccagagtgctggctgtggtagactc 243
              ||||||||||||||||| ||||| |||||
Sbjct: 119370 gccaccagagtgctggccgtggttgactc 119398
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>ref|NM_115941.2| Arabidopsis thaliana structural constituent of ribosome AT3G60770
           mRNA, complete cds
          Length = 778

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 213 aagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttgg 272
           ||||||| |||||||| || || ||||||||||||||||||  ||| |||||||||||||
Sbjct: 541 aagccacaagagtgcttgcagttgtagactcgtacttccagacgggtgggagcttcttgg 482

            
Query: 273 t 273
           |
Sbjct: 481 t 481
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>gb|AY090366.1| Arabidopsis thaliana AT3g60770/T4C21_180 mRNA, complete cds
          Length = 739

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 213 aagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttgg 272
           ||||||| |||||||| || || ||||||||||||||||||  ||| |||||||||||||
Sbjct: 533 aagccacaagagtgcttgcagttgtagactcgtacttccagacgggtgggagcttcttgg 474

            
Query: 273 t 273
           |
Sbjct: 473 t 473
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>gb|AY056088.1| Arabidopsis thaliana AT3g60770/T4C21_180 mRNA, complete cds
          Length = 456

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 213 aagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttgg 272
           ||||||| |||||||| || || ||||||||||||||||||  ||| |||||||||||||
Sbjct: 454 aagccacaagagtgcttgcagttgtagactcgtacttccagacgggtgggagcttcttgg 395

            
Query: 273 t 273
           |
Sbjct: 394 t 394
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>gb|AY052731.1| Arabidopsis thaliana AT3g60770/T4C21_180 mRNA, complete cds
          Length = 456

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 213 aagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttgg 272
           ||||||| |||||||| || || ||||||||||||||||||  ||| |||||||||||||
Sbjct: 454 aagccacaagagtgcttgcagttgtagactcgtacttccagacgggtgggagcttcttgg 395

            
Query: 273 t 273
           |
Sbjct: 394 t 394
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>gb|AF380636.1|AF380636 Arabidopsis thaliana AT3g60770/T4C21_180 mRNA, complete cds
          Length = 756

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 213 aagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttgg 272
           ||||||| |||||||| || || ||||||||||||||||||  ||| |||||||||||||
Sbjct: 535 aagccacaagagtgcttgcagttgtagactcgtacttccagacgggtgggagcttcttgg 476

            
Query: 273 t 273
           |
Sbjct: 475 t 475
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>gb|AF378861.1|AF378861 Arabidopsis thaliana AT3g60770/T4C21_180 mRNA, complete cds
          Length = 772

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 213 aagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttgg 272
           ||||||| |||||||| || || ||||||||||||||||||  ||| |||||||||||||
Sbjct: 535 aagccacaagagtgcttgcagttgtagactcgtacttccagacgggtgggagcttcttgg 476

            
Query: 273 t 273
           |
Sbjct: 475 t 475
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>emb|BX823053.1|CNS0A76V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB84ZG07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 710

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 213 aagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttgg 272
           ||||||| |||||||| || || ||||||||||||||||||  ||| |||||||||||||
Sbjct: 527 aagccacaagagtgcttgcagttgtagactcgtacttccagacgggtgggagcttcttgg 468

            
Query: 273 t 273
           |
Sbjct: 467 t 467
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>ref|XM_479792.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 471

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                           
Query: 248 ttccaggtgggcgggagcttcttggtgcgctt 279
           ||||||||||||||||||||||||||||||||
Sbjct: 419 ttccaggtgggcgggagcttcttggtgcgctt 388
to top
>gb|AY618066.1| Sterkiella histriomuscorum clone UGC1O0003_I11_R genomic sequence
          Length = 818

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 239 gactcgtacttccaggtgggcgggagcttcttggt 273
           |||||||||||||| ||||| ||||||| ||||||
Sbjct: 583 gactcgtacttccatgtgggtgggagctgcttggt 549
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>gb|AY617889.1| Sterkiella histriomuscorum clone UGC1O0006_D09_R genomic sequence
          Length = 792

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 239 gactcgtacttccaggtgggcgggagcttcttggt 273
           |||||||||||||| ||||| ||||||| ||||||
Sbjct: 226 gactcgtacttccatgtgggtgggagctgcttggt 260
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>ref|XM_368895.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00349.4) partial mRNA
          Length = 456

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 224 gtgctggctgtggtagactcgtacttccaggtggg 258
           |||||||| ||||  ||||||||||||||||||||
Sbjct: 443 gtgctggcggtggcggactcgtacttccaggtggg 409
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>ref|NM_116227.2| Arabidopsis thaliana ATRPS13A (RIBOSOMAL PROTEIN S13A); structural
           constituent of ribosome AT4G00100 (ATRPS13A) mRNA,
           complete cds
          Length = 721

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 taagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttg 271
           |||||||| || ||||| || || || || ||||||||||||  ||| ||||||||||||
Sbjct: 531 taagccacaagggtgctcgcggtagtggattcgtacttccagacgggagggagcttcttg 472

             
Query: 272 gt 273
           ||
Sbjct: 471 gt 470
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>ref|XM_958950.1| Neurospora crassa OR74A hypothetical protein (NCU03038.1) partial
           mRNA
          Length = 456

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 233 gtggtagactcgtacttccaggtggg 258
           |||| |||||||||||||||||||||
Sbjct: 434 gtggaagactcgtacttccaggtggg 409
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>ref|XM_330224.1| Neurospora crassa OR74A hypothetical protein (NCU03038.1) partial
           mRNA
          Length = 456

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 233 gtggtagactcgtacttccaggtggg 258
           |||| |||||||||||||||||||||
Sbjct: 434 gtggaagactcgtacttccaggtggg 409
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>ref|XM_659191.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6679.2), mRNA
          Length = 510

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 239 gactcgtacttccaggtgggcgggag 264
           |||||||||||||||||||| |||||
Sbjct: 482 gactcgtacttccaggtgggggggag 457
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 11       gaaatgtggatgcatgccaaaa 32
                ||||||||||||||||||||||
Sbjct: 13745314 gaaatgtggatgcatgccaaaa 13745293
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>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0048D11, from chromosome 3, complete sequence
          Length = 158911

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 11    gaaatgtggatgcatgccaaaa 32
             ||||||||||||||||||||||
Sbjct: 21842 gaaatgtggatgcatgccaaaa 21821
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>gb|AY057544.1| Arabidopsis thaliana AT4g00100/F6N15_7 mRNA, complete cds
          Length = 719

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 taagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttg 271
           |||||||| || ||||| || || || || ||||||||||||  ||| ||||||||||||
Sbjct: 531 taagccacaagggtgctcgcggtagtggattcgtacttccagacgggagggagcttcttg 472

             
Query: 272 gt 273
           ||
Sbjct: 471 gt 470
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>gb|BT006543.1| Arabidopsis thaliana At4g00100 gene, complete cds
          Length = 456

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 taagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttg 271
           |||||||| || ||||| || || || || ||||||||||||  ||| ||||||||||||
Sbjct: 455 taagccacaagggtgctcgcggtagtggattcgtacttccagacgggagggagcttcttg 396

             
Query: 272 gt 273
           ||
Sbjct: 395 gt 394
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>gb|AF370471.1|AF370471 Arabidopsis thaliana similar to ribosomal protein S13 (F6N15.7)
           mRNA, complete cds
          Length = 691

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 taagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttg 271
           |||||||| || ||||| || || || || ||||||||||||  ||| ||||||||||||
Sbjct: 508 taagccacaagggtgctcgcggtagtggattcgtacttccagacgggagggagcttcttg 449

             
Query: 272 gt 273
           ||
Sbjct: 448 gt 447
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 11       gaaatgtggatgcatgccaaaa 32
                ||||||||||||||||||||||
Sbjct: 13740289 gaaatgtggatgcatgccaaaa 13740268
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>emb|BX827841.1|CNS0A317 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH26ZG05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 699

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 taagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttg 271
           |||||||| || ||||| || || || || ||||||||||||  ||| ||||||||||||
Sbjct: 511 taagccacaagggtgctcgcggtagtggattcgtacttccagacgggagggagcttcttg 452

             
Query: 272 gt 273
           ||
Sbjct: 451 gt 450
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>emb|BX827751.1|CNS0A2ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH18ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 699

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 taagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttg 271
           |||||||| || ||||| || || || || ||||||||||||  ||| ||||||||||||
Sbjct: 512 taagccacaagggtgctcgcggtagtggattcgtacttccagacgggagggagcttcttg 453

             
Query: 272 gt 273
           ||
Sbjct: 452 gt 451
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>emb|BX828001.1|CNS0A29T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH43ZA05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 659

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 taagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttg 271
           |||||||| || ||||| || || || || ||||||||||||  ||| ||||||||||||
Sbjct: 530 taagccacaagggtgctcgcggtagtggattcgtacttccagacgggagggagcttcttg 471

             
Query: 272 gt 273
           ||
Sbjct: 470 gt 469
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>gb|AY088038.1| Arabidopsis thaliana clone 4058 mRNA, complete sequence
          Length = 715

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 taagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttg 271
           |||||||| || ||||| || || || || ||||||||||||  ||| ||||||||||||
Sbjct: 527 taagccacaagggtgctcgcggtagtggattcgtacttccagacgggagggagcttcttg 468

             
Query: 272 gt 273
           ||
Sbjct: 467 gt 466
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>dbj|AB031739.1| Arabidopsis thaliana AtRPS13A mRNA for cytoplasmic ribosomal
           protein S13, complete cds
          Length = 706

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 taagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttcttg 271
           |||||||| || ||||| || || || || ||||||||||||  ||| ||||||||||||
Sbjct: 520 taagccacaagggtgctcgcggtagtggattcgtacttccagacgggagggagcttcttg 461

             
Query: 272 gt 273
           ||
Sbjct: 460 gt 459
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>ref|XM_448067.1| Candida glabrata CBS138, CAGL0J08250g partial mRNA
          Length = 3531

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 126  aactcaaaagcgttacataaaattgatga 154
            ||||| ||||||||||| |||||||||||
Sbjct: 1099 aactctaaagcgttacaaaaaattgatga 1127
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>gb|AY050961.1| Arabidopsis thaliana At2g46830 mRNA sequence
          Length = 2684

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 40  gacagaactgcaaaaccaaaaatggttta 68
           |||||||||| |||| |||||||||||||
Sbjct: 783 gacagaactggaaaatcaaaaatggttta 755
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>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 126    aactcaaaagcgttacataaaattgatga 154
              ||||| ||||||||||| |||||||||||
Sbjct: 818542 aactctaaagcgttacaaaaaattgatga 818514
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>gb|AC005310.3| Arabidopsis thaliana chromosome 2 clone F19D11 map CIC06C03, complete
             sequence
          Length = 68415

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 40    gacagaactgcaaaaccaaaaatggttta 68
             |||||||||| |||| |||||||||||||
Sbjct: 45989 gacagaactggaaaatcaaaaatggttta 45961
to top
>gb|U79156.1|ATU79156 Arabidopsis thaliana Myb-related transcription factor CCA1 gene,
            complete cds
          Length = 5242

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 40   gacagaactgcaaaaccaaaaatggttta 68
            |||||||||| |||| |||||||||||||
Sbjct: 3005 gacagaactggaaaatcaaaaatggttta 2977
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 48       tgcaaaaccaaaaatggttta 68
                |||||||||||||||||||||
Sbjct: 15351343 tgcaaaaccaaaaatggttta 15351323



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 49      gcaaaaccaaaaatggttta 68
               ||||||||||||||||||||
Sbjct: 8813040 gcaaaaccaaaaatggttta 8813021
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>emb|BX820657.1|CNS0A7YQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH57ZB11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2627

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 40  gacagaactgcaaaaccaaaaatggttta 68
           |||||||||| |||| |||||||||||||
Sbjct: 790 gacagaactggaaaatcaaaaatggttta 762
to top
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1047_A06
          Length = 111673

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    tgcaaaaccaaaaatggttta 68
             |||||||||||||||||||||
Sbjct: 58342 tgcaaaaccaaaaatggttta 58322
to top
>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0475E07
          Length = 139961

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     tgcaaaaccaaaaatggttta 68
              |||||||||||||||||||||
Sbjct: 137356 tgcaaaaccaaaaatggttta 137336
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>gb|AC093481.8| Mus musculus chromosome 18, clone RP23-62E19, complete sequence
          Length = 242587

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   acataaaattgatgatatgt 159
             ||||||||||||||||||||
Sbjct: 80609 acataaaattgatgatatgt 80590
to top
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18,
              complete sequence
          Length = 143163

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     gcaaaaccaaaaatggttta 68
              ||||||||||||||||||||
Sbjct: 142886 gcaaaaccaaaaatggttta 142867
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>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09,
              complete sequence
          Length = 168192

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     gcaaaaccaaaaatggttta 68
              ||||||||||||||||||||
Sbjct: 160445 gcaaaaccaaaaatggttta 160464
to top
>gb|AY453393.1| Glycine max ribosomal protein S13 (RPS13) mRNA, complete cds
          Length = 742

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 211 ctaagccaccagagtgctggctgtggtagactcgtacttccaggtgggcgggagcttctt 270
           |||||| ||||||||||| || || || || ||||||||||||   || |||||||||||
Sbjct: 549 ctaagcaaccagagtgctagcagttgttgattcgtacttccagactggtgggagcttctt 490
to top
>ref|XM_387224.1| Gibberella zeae PH-1 chromosome 4 RS13_XENLA 40S RIBOSOMAL PROTEIN
           S13 (FG07048.1) partial mRNA
          Length = 456

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 gactcgtacttccaggtggg 258
           ||||||||||||||||||||
Sbjct: 428 gactcgtacttccaggtggg 409
to top
>gb|AC087430.3| Homo sapiens chromosome 3 clone RP11-242C8 map 3p, complete sequence
          Length = 152289

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 140   acataaaattgatgatatgtagaa 163
             ||||||||||||||||||| ||||
Sbjct: 29875 acataaaattgatgatatgaagaa 29852
to top
>gb|BC056028.1| Xenopus laevis ribosomal protein S13, mRNA (cDNA clone MGC:68963
           IMAGE:4959636), complete cds
          Length = 547

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 229 ggctgtggtagactcgtacttccaggtgggcgggag 264
           ||||||||  ||||||||||||||| |||| |||||
Sbjct: 471 ggctgtggaggactcgtacttccagttgggagggag 436
to top
>gb|AC109619.11| Mus musculus chromosome 19, clone RP23-427F6, complete sequence
          Length = 170072

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    caagaccatcctgaggctgg 183
              ||||||||||||||||||||
Sbjct: 124575 caagaccatcctgaggctgg 124556
to top
>ref|XM_505270.1| Yarrowia lipolytica CLIB122, YALI0F11055g predicted mRNA
          Length = 456

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 gactcgtacttccaggtggg 258
           ||||||||||||||||||||
Sbjct: 428 gactcgtacttccaggtggg 409
to top
>emb|AL356754.18| Human DNA sequence from clone RP11-11C5 on chromosome 13 Contains a 60S
              ribosomal protein L21 (RPL21) pseudogene and the 3' end of
              a novel gene, complete sequence
          Length = 169888

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 217    caccagagtgctggctgtgg 236
              ||||||||||||||||||||
Sbjct: 103291 caccagagtgctggctgtgg 103272
to top
>emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence;
              segment 2/4
          Length = 346939

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    gttacataaaattgatgata 156
              ||||||||||||||||||||
Sbjct: 268675 gttacataaaattgatgata 268694
to top
>ref|NM_001016602.2| Xenopus tropicalis ribosomal protein S13 (rps13), mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 229 ggctgtggtagactcgtacttccaggtgggcgggag 264
           ||||||||  ||||||||||||||| |||| |||||
Sbjct: 446 ggctgtggaggactcgtacttccagttgggggggag 411
to top
>gb|AC097511.1| Homo sapiens BAC clone RP11-393A12 from 4, complete sequence
          Length = 195252

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 8      aatgaaatgtggatgcatgccaaa 31
              ||||||||||||||| ||||||||
Sbjct: 190485 aatgaaatgtggatgtatgccaaa 190462
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 49       gcaaaaccaaaaatggttta 68
                ||||||||||||||||||||
Sbjct: 12361289 gcaaaaccaaaaatggttta 12361308
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       gcaaaaccaaaaatggttta 68
                ||||||||||||||||||||
Sbjct: 38420634 gcaaaaccaaaaatggttta 38420615
to top
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence
          Length = 193444

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    gcaaaaccaaaaatggttta 68
             ||||||||||||||||||||
Sbjct: 13738 gcaaaaccaaaaatggttta 13719
to top
>gb|AC016955.15| Homo sapiens 3 BAC RP11-21I16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 169343

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    gagtaaacatagaaaatttg 99
             ||||||||||||||||||||
Sbjct: 75208 gagtaaacatagaaaatttg 75189
to top
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1065E10
          Length = 183580

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     gcaaaaccaaaaatggttta 68
              ||||||||||||||||||||
Sbjct: 181459 gcaaaaccaaaaatggttta 181440
to top
>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0408G07
          Length = 126631

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   gcaaaaccaaaaatggttta 68
            ||||||||||||||||||||
Sbjct: 6049 gcaaaaccaaaaatggttta 6030
to top
>gb|AC157908.5| Mus musculus chromosome 18, clone RP24-286P2, complete sequence
          Length = 161561

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   acataaaattgatgatatgt 159
             ||||||||||||||||||||
Sbjct: 53068 acataaaattgatgatatgt 53087
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>dbj|AP005051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0458G06
          Length = 139109

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    gcaaaaccaaaaatggttta 68
             ||||||||||||||||||||
Sbjct: 43140 gcaaaaccaaaaatggttta 43121
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>emb|CR760551.2| Xenopus tropicalis finished cDNA, clone TEgg034k23
          Length = 531

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 229 ggctgtggtagactcgtacttccaggtgggcgggag 264
           ||||||||  ||||||||||||||| |||| |||||
Sbjct: 446 ggctgtggaggactcgtacttccagttgggggggag 411
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 49       gcaaaaccaaaaatggttta 68
                ||||||||||||||||||||
Sbjct: 12368629 gcaaaaccaaaaatggttta 12368648
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 239     gactcgtacttccaggtggg 258
               ||||||||||||||||||||
Sbjct: 1470805 gactcgtacttccaggtggg 1470824


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,160,376
Number of Sequences: 3902068
Number of extensions: 3160376
Number of successful extensions: 56326
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56046
Number of HSP's gapped (non-prelim): 280
length of query: 285
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 263
effective length of database: 17,147,199,772
effective search space: 4509713540036
effective search space used: 4509713540036
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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