ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19j21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLTR_ARATH (Q9FWA4) Probable glycosyltransferase At3g02350 (EC 2... 237 2e-62
2QUA1_ARATH (Q9LSG3) Glycosyltransferase QUASIMODO1 (EC 2.4.1.-) 234 2e-61
3TINAG_HUMAN (Q9UJW2) Tubulointerstitial nephritis antigen (TIN-Ag) 31 2.7
4NS1_IADU3 (P08270) Nonstructural protein 1 (NS1) (NS1A) (Fragment) 30 6.0
5NS1_IATRS (P08278) Nonstructural protein 1 (NS1) (NS1A) (Fragment) 30 7.9
6METE_BUCAP (Q8KA71) 5-methyltetrahydropteroyltriglutamate--homoc... 30 7.9

>GLTR_ARATH (Q9FWA4) Probable glycosyltransferase At3g02350 (EC 2.4.1.-)|
          Length = 561

 Score =  237 bits (604), Expect = 2e-62
 Identities = 100/158 (63%), Positives = 128/158 (81%)
 Frame = -3

Query: 638 IDMKGKVNGAVETCGESFHRFGRYLNFSSPVIAKNFDPDACGWAFGMNVFDLAEWRRQNI 459
           I++ GKVNGAVETC  SFHR+G+YLNFS P+I +NF+P AC WAFGMN+FDL  WRR+  
Sbjct: 401 INLDGKVNGAVETCFGSFHRYGQYLNFSHPLIKENFNPSACAWAFGMNIFDLNAWRREKC 460

Query: 458 TELYHFWQKLNEDGLLWKLGTLPPGLVTFWNKTFPLDRSWHVLGLGYNPHVSSRDLERAA 279
           T+ YH+WQ LNED  LWKLGTLPPGL+TF++KT  LD+SWHVLGLGYNP VS  ++  A 
Sbjct: 461 TDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGYNPGVSMDEIRNAG 520

Query: 278 VIHYNGNLKPWLEIGLPKFRSYWSKYLDYDQPFLRECN 165
           VIHYNGN+KPWL+I + +++S W+KY+D +  F++ CN
Sbjct: 521 VIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCN 558



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>QUA1_ARATH (Q9LSG3) Glycosyltransferase QUASIMODO1 (EC 2.4.1.-)|
          Length = 559

 Score =  234 bits (596), Expect = 2e-61
 Identities = 98/158 (62%), Positives = 126/158 (79%)
 Frame = -3

Query: 638 IDMKGKVNGAVETCGESFHRFGRYLNFSSPVIAKNFDPDACGWAFGMNVFDLAEWRRQNI 459
           IDM GKVNGAVETC  SFHR+ +Y+NFS P+I + F+P AC WA+GMN FDL  WRR+  
Sbjct: 399 IDMDGKVNGAVETCFGSFHRYAQYMNFSHPLIKEKFNPKACAWAYGMNFFDLDAWRREKC 458

Query: 458 TELYHFWQKLNEDGLLWKLGTLPPGLVTFWNKTFPLDRSWHVLGLGYNPHVSSRDLERAA 279
           TE YH+WQ LNE+  LWKLGTLPPGL+TF++ T PLD+SWHVLGLGYNP +S  ++  AA
Sbjct: 459 TEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAA 518

Query: 278 VIHYNGNLKPWLEIGLPKFRSYWSKYLDYDQPFLRECN 165
           V+H+NGN+KPWL+I + +FR  W+K++DYD  F++ CN
Sbjct: 519 VVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACN 556



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>TINAG_HUMAN (Q9UJW2) Tubulointerstitial nephritis antigen (TIN-Ag)|
          Length = 476

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 476 WRRQNITELYHFWQKLNEDGLLWKLGTLPP 387
           W  QN ++   FW    EDG  ++LGTLPP
Sbjct: 171 WTAQNYSQ---FWGMTLEDGFKFRLGTLPP 197



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>NS1_IADU3 (P08270) Nonstructural protein 1 (NS1) (NS1A) (Fragment)|
          Length = 227

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -1

Query: 202 TLTMISLFCGNATSIREARPVPPTPSHSDSSLGSSVFDLFVSLDF 68
           TL ++  F  +   + E  P+P  P H+D  + +++ DL   L++
Sbjct: 140 TLILLRAFTEDGAIVGEISPLPSLPGHTDEDVKNAIGDLIGGLEW 184



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>NS1_IATRS (P08278) Nonstructural protein 1 (NS1) (NS1A) (Fragment)|
          Length = 227

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -1

Query: 202 TLTMISLFCGNATSIREARPVPPTPSHSDSSLGSSVFDLFVSLDF 68
           TL ++  F      + E  P+P  P H+D  + +++ DL   L++
Sbjct: 140 TLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGDLIGGLEW 184



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>METE_BUCAP (Q8KA71) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 757

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = -3

Query: 389 PGLVTFWN---KTFPLDRSWHVLGLGYNPHVSSRDLERAAVIHYNGNLKPWLEIGLPKFR 219
           P  + FW+   +   L++    +GL     V   + E+  +I  +   +P L  GLP  +
Sbjct: 554 PVTILFWSFPREDISLEKIAKQIGLALRDEVLDLEKEKIEIIQID---EPALREGLPLRK 610

Query: 218 SYWSKYLDY 192
           S W++YL +
Sbjct: 611 SLWNEYLSW 619


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,278,852
Number of Sequences: 219361
Number of extensions: 2147271
Number of successful extensions: 6215
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6213
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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