ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags19j17 |
|---|---|
| Clone Library Name | barley_pub |
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 115 bits (288), Expect = 4e-26 Identities = 57/70 (81%), Positives = 61/70 (87%) Frame = -3 Query: 427 AKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLT 248 AKAL+AFKRFGSRLV+IE RI DMN + ALKNRNGPVKMPYMLLYPNTSD EK GLT Sbjct: 808 AKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLT 867 Query: 247 AMGIPNSVSI 218 AMGIPNS+SI Sbjct: 868 AMGIPNSISI 877
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 100 bits (250), Expect = 1e-21 Identities = 50/69 (72%), Positives = 54/69 (78%) Frame = -3 Query: 424 KALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTA 245 KALE FKRF RLVEIE +++ MN DP LKNRNGP K PYMLLYPNTSD G A GLTA Sbjct: 795 KALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKG-AAAGLTA 853 Query: 244 MGIPNSVSI 218 GIPNS+SI Sbjct: 854 KGIPNSISI 862
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 97.8 bits (242), Expect = 9e-21 Identities = 49/70 (70%), Positives = 55/70 (78%) Frame = -3 Query: 427 AKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLT 248 AKALEAFKRFG+RL EIE R++ MNKDP KNR GP PY LLYPNTSD G+ A GL+ Sbjct: 802 AKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGD-AAGLS 860 Query: 247 AMGIPNSVSI 218 A GIPNS+SI Sbjct: 861 ARGIPNSISI 870
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 96.3 bits (238), Expect = 3e-20 Identities = 47/70 (67%), Positives = 55/70 (78%) Frame = -3 Query: 427 AKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLT 248 A+ALEAF+RF RLVEIE +++ MN D LKNRNGP + PYMLLYPNTSD G A G+T Sbjct: 798 ARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTG-AAAGIT 856 Query: 247 AMGIPNSVSI 218 A GIPNS+SI Sbjct: 857 AKGIPNSISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 93.2 bits (230), Expect = 2e-19 Identities = 46/69 (66%), Positives = 54/69 (78%) Frame = -3 Query: 424 KALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTA 245 KALEAFKRF +LVEIE ++L+MNKDP LKNR GP PY L++PNTSD G A G+TA Sbjct: 796 KALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKG-AAEGITA 854 Query: 244 MGIPNSVSI 218 GIPNS+SI Sbjct: 855 RGIPNSISI 863
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 81.6 bits (200), Expect = 7e-16 Identities = 41/69 (59%), Positives = 50/69 (72%) Frame = -3 Query: 424 KALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTA 245 KAL+AFKRFG +L EIE++I+ NKD +L+NRNGPVKMPY +L P D GLT Sbjct: 800 KALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCEDE------GLTF 853 Query: 244 MGIPNSVSI 218 GIPNS+SI Sbjct: 854 RGIPNSISI 862
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 80.5 bits (197), Expect = 2e-15 Identities = 40/70 (57%), Positives = 50/70 (71%) Frame = -3 Query: 427 AKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLT 248 A LEAFKRFG +L EIEK++++ NKD L+NR GP KMPY LLYP++ + GLT Sbjct: 791 AGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSEE-------GLT 843 Query: 247 AMGIPNSVSI 218 GIPNS+SI Sbjct: 844 FRGIPNSISI 853
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 79.3 bits (194), Expect = 3e-15 Identities = 38/69 (55%), Positives = 51/69 (73%) Frame = -3 Query: 424 KALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTA 245 +ALEAFK+FG++L EIEK++ N D L+NR+GPV+MPY LLYP++ + GLT Sbjct: 800 RALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSKE-------GLTF 852 Query: 244 MGIPNSVSI 218 GIPNS+SI Sbjct: 853 RGIPNSISI 861
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 76.6 bits (187), Expect = 2e-14 Identities = 37/66 (56%), Positives = 47/66 (71%) Frame = -3 Query: 415 EAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGI 236 EAFKRFG +L EIE+++ N D +L+NR GPVKMPY LLYP++ + GLT GI Sbjct: 808 EAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSEE-------GLTCRGI 860 Query: 235 PNSVSI 218 PNS+SI Sbjct: 861 PNSISI 866
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 73.6 bits (179), Expect = 2e-13 Identities = 38/69 (55%), Positives = 49/69 (71%) Frame = -3 Query: 424 KALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTA 245 KALEAFKRFGS+L IE +I N DP+L+NR GPV++PY LL+ ++ + GLT Sbjct: 803 KALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEE-------GLTF 855 Query: 244 MGIPNSVSI 218 GIPNS+SI Sbjct: 856 KGIPNSISI 864
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 73.2 bits (178), Expect = 2e-13 Identities = 36/69 (52%), Positives = 49/69 (71%) Frame = -3 Query: 424 KALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTA 245 +ALEAFKRFG++L +IE ++ + N D L+NR GPV+MPY LL P++ + GLT Sbjct: 796 RALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKE-------GLTF 848 Query: 244 MGIPNSVSI 218 GIPNS+SI Sbjct: 849 RGIPNSISI 857
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 72.0 bits (175), Expect = 6e-13 Identities = 35/70 (50%), Positives = 50/70 (71%) Frame = -3 Query: 427 AKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLT 248 +KAL+AF++FG++L EIE+++ N D +L NR GPV++PY LL+PN+ GLT Sbjct: 804 SKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSE--------GLT 855 Query: 247 AMGIPNSVSI 218 GIPNS+SI Sbjct: 856 CRGIPNSISI 865
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 72.0 bits (175), Expect = 6e-13 Identities = 34/70 (48%), Positives = 52/70 (74%) Frame = -3 Query: 427 AKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLT 248 +KAL+AF++FG++L EIE ++ + N DP+L +R GPV++PY LL+P++ + GLT Sbjct: 802 SKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSKE-------GLT 854 Query: 247 AMGIPNSVSI 218 GIPNS+SI Sbjct: 855 FRGIPNSISI 864
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 72.0 bits (175), Expect = 6e-13 Identities = 36/71 (50%), Positives = 54/71 (76%), Gaps = 1/71 (1%) Frame = -3 Query: 427 AKALEAFKRFGSRLVEIEKRILDMNKDPALK-NRNGPVKMPYMLLYPNTSDANGEKALGL 251 +KAL+AF++FG++L EIE++++ N DP+L+ NR GPV++PY LLYP++ + GL Sbjct: 776 SKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEE-------GL 828 Query: 250 TAMGIPNSVSI 218 T GIPNS+SI Sbjct: 829 TFRGIPNSISI 839
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 70.5 bits (171), Expect = 2e-12 Identities = 37/69 (53%), Positives = 47/69 (68%) Frame = -3 Query: 424 KALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTA 245 +ALEAF++FG ++ EIEK I + N D LKNR G VKMPY LL+P++ G+T Sbjct: 798 EALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEG-------GVTG 850 Query: 244 MGIPNSVSI 218 GIPNSVSI Sbjct: 851 RGIPNSVSI 859
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 68.2 bits (165), Expect = 8e-12 Identities = 34/64 (53%), Positives = 42/64 (65%) Frame = -3 Query: 427 AKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLT 248 A LEAFKRFG +L EIEK+++ N D L+NR GP KMPY LLYP++ + GLT Sbjct: 685 AGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSEE-------GLT 737 Query: 247 AMGI 236 GI Sbjct: 738 FRGI 741
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 67.0 bits (162), Expect = 2e-11 Identities = 35/67 (52%), Positives = 44/67 (65%) Frame = -3 Query: 418 LEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMG 239 L AF+RFG L +IE RI+ MN + KNR+GPV +PY LL+P + + GLT G Sbjct: 800 LVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSEE-------GLTGKG 852 Query: 238 IPNSVSI 218 IPNSVSI Sbjct: 853 IPNSVSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 66.6 bits (161), Expect = 2e-11 Identities = 35/67 (52%), Positives = 42/67 (62%) Frame = -3 Query: 418 LEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMG 239 L AF RFG +L +IEK+I+ N D L NR+GPV PY LL+P + GLT G Sbjct: 802 LAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEG-------GLTGKG 854 Query: 238 IPNSVSI 218 IPNSVSI Sbjct: 855 IPNSVSI 861
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 65.5 bits (158), Expect = 5e-11 Identities = 34/67 (50%), Positives = 43/67 (64%) Frame = -3 Query: 418 LEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMG 239 L AF+RFG++L +IEK+I+ N + L NR GPV PY LL+P + GLT G Sbjct: 801 LAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEG-------GLTGKG 853 Query: 238 IPNSVSI 218 IPNSVSI Sbjct: 854 IPNSVSI 860
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 48.9 bits (115), Expect = 5e-06 Identities = 33/65 (50%), Positives = 38/65 (58%) Frame = -3 Query: 412 AFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIP 233 A+ F +RL EIE I NKD LKNR G +PY L+ P SDA G+T MGIP Sbjct: 884 AYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKP-FSDA------GVTGMGIP 936 Query: 232 NSVSI 218 NS SI Sbjct: 937 NSTSI 941
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 48.5 bits (114), Expect = 7e-06 Identities = 30/65 (46%), Positives = 36/65 (55%) Frame = -3 Query: 412 AFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIP 233 A+ F +RL EIE I NKD LKNR G +PY L+ P + G+T MGIP Sbjct: 867 AYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDS-------GVTGMGIP 919 Query: 232 NSVSI 218 NS SI Sbjct: 920 NSTSI 924
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 46.6 bits (109), Expect = 3e-05 Identities = 25/66 (37%), Positives = 42/66 (63%) Frame = -3 Query: 415 EAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGI 236 +AF+ F ++ +I +++ + NKD + +NR+G +PY+LL P + N A + MGI Sbjct: 869 KAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRP--LNGNPMDAKTVMEMGI 926 Query: 235 PNSVSI 218 PNS+SI Sbjct: 927 PNSISI 932
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 45.1 bits (105), Expect = 7e-05 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 3/69 (4%) Frame = -3 Query: 415 EAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYP---NTSDANGEKALGLTA 245 +AF+ F +I +++ + N DP KNR+G +PY+LL P + +D + + Sbjct: 868 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVME 927 Query: 244 MGIPNSVSI 218 MGIPNS+SI Sbjct: 928 MGIPNSISI 936
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 44.7 bits (104), Expect = 1e-04 Identities = 28/65 (43%), Positives = 35/65 (53%) Frame = -3 Query: 412 AFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIP 233 AF++F RL E E I N +P KNR G +PY LL P + G+T GIP Sbjct: 839 AFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEP-------GVTGRGIP 891 Query: 232 NSVSI 218 NS+SI Sbjct: 892 NSISI 896
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 42.7 bits (99), Expect = 4e-04 Identities = 24/68 (35%), Positives = 37/68 (54%) Frame = -3 Query: 421 ALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAM 242 AL A + F + + E+ I N DP+ +NR G +PY L+ P++ G+T Sbjct: 839 ALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGP-------GITCR 891 Query: 241 GIPNSVSI 218 G+PNSV+I Sbjct: 892 GVPNSVTI 899
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 39.7 bits (91), Expect = 0.003 Identities = 25/65 (38%), Positives = 35/65 (53%) Frame = -3 Query: 412 AFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIP 233 AF+RF +L +E I + N + LKNR G + Y LL P + G+T MG+P Sbjct: 839 AFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEH-------GVTGMGVP 891 Query: 232 NSVSI 218 S+SI Sbjct: 892 YSISI 896
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 37.7 bits (86), Expect = 0.012 Identities = 24/68 (35%), Positives = 34/68 (50%) Frame = -3 Query: 421 ALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAM 242 A+ A F + + E+ I N D KNR G +PY LL P++ G+T Sbjct: 858 AVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPP-------GVTCR 910 Query: 241 GIPNSVSI 218 G+PNS+SI Sbjct: 911 GVPNSISI 918
>CMGA_PIG (P04404) Chromogranin A precursor (CgA) [Contains: Pancreastatin;| Parastatin; WE-14] (Fragment) Length = 446 Score = 33.9 bits (76), Expect = 0.17 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = -2 Query: 428 RQGARGVQEVRQPAGG--DREADPRHEQGPGAQEPERAREDALHAAVPQ 288 R GA+ ++ P+ G DRE P EQGP A+ E +A AVP+ Sbjct: 185 RPGAQAEEDHEGPSQGPVDREKGPSAEQGPQAEREEEEEAEAGEKAVPE 233
>ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (MXBP protein) Length = 487 Score = 31.6 bits (70), Expect = 0.83 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 10/101 (9%) Frame = +3 Query: 21 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 170 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 171 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 293 G T+ + RP S Q SP+ +P + G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (HB16) Length = 487 Score = 31.2 bits (69), Expect = 1.1 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +3 Query: 21 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 170 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 171 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 293 G T+ + RP S Q SP+ +P G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSG 323
>ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) Length = 487 Score = 31.2 bits (69), Expect = 1.1 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 10/90 (11%) Frame = +3 Query: 21 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*KV----------TQYTLRDTNRSMTS 170 H P + ++ ++ P IPG PQP +S+ K+ Q T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSIPGIPGPSSPQPVQSEAKLRLKAALTQQHPQVTNGDTAKGHPS 282 Query: 171 GRTTTERRKQRPCSAQMETLLGMPMAVSPS 260 G T+ + RP S Q SP+ Sbjct: 283 GLVRTQSEEPRPQSLQQPATSTTETPASPA 312
>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)| Length = 449 Score = 30.8 bits (68), Expect = 1.4 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +2 Query: 23 LSSPYQHHLRHNHHFPSSTNPW---QLITATTQKPMKSNTIH 139 L+ Y HH H+HH PS +P+ L A P ++ +H Sbjct: 173 LNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLH 214
>SPI1_SOLTU (P58514) Serine protease inhibitor 1 precursor (PSPI-21)| (PSPI-21-6.3) [Contains: Serine protease inhibitor 1 chain A; Serine protease inhibitor 1 chain B] Length = 221 Score = 30.8 bits (68), Expect = 1.4 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 8/56 (14%) Frame = +3 Query: 252 SPSAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 395 SP++ +P A+ V Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 69 SPNSDAPCANGVFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124
>SPI2_SOLTU (P58515) Serine protease inhibitor 2 (PSPI-21) (PSPI-21-5.2)| [Contains: Serine protease inhibitor 2 chain A; Serine protease inhibitor 2 chain B] Length = 186 Score = 30.4 bits (67), Expect = 1.9 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%) Frame = +3 Query: 252 SPSAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 395 SP++ +P A+ + Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 41 SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 96
>ABDA_TRICA (Q07961) Homeobox protein abdominal-A homolog| Length = 343 Score = 30.4 bits (67), Expect = 1.9 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = -2 Query: 416 RGVQEVRQPAGGDREADPRHEQGPGAQEPERAREDALHAAVPQH 285 R V+E+ + A +RE RH+Q QE ++ E H+++ QH Sbjct: 276 RAVKEINEQARREREEQERHKQ--QQQEKQQKIEQQTHSSIHQH 317
>SPI7_SOLTU (P30941) Serine protease inhibitor 7 precursor (PIG) (PIGEN1)| (Allergen Sola t 4) (STPIB) (STPIA) (pKEN14-28) (pF4) Length = 221 Score = 30.4 bits (67), Expect = 1.9 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%) Frame = +3 Query: 252 SPSAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 395 SP++ +P A+ + Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 69 SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124
>SPI6_SOLTU (Q41433) Probable serine protease inhibitor 6 precursor (AM66)| Length = 221 Score = 30.4 bits (67), Expect = 1.9 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%) Frame = +3 Query: 252 SPSAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 395 SP++ +P A+ + Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 69 SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124
>TRUB_GLOVI (Q7MBB8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 292 Score = 30.0 bits (66), Expect = 2.4 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +3 Query: 207 CSAQMETLLGMPMAVSPSAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLFMSRIRFSIST 386 C A++ +LG P A+ VL + G T RFLS G ++ + +RF +ST Sbjct: 18 CIARLRRVLGERRIGHGGTLDPAATGVLPVAV--GRATRLLRFLSEGKVYRATVRFGLST 75
>ATF2_RAT (Q00969) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) Length = 487 Score = 29.6 bits (65), Expect = 3.2 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +3 Query: 21 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 170 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 171 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 293 G + + RP S Q SP+ +P + G Sbjct: 283 GLVRAQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein| ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399) Length = 331 Score = 29.3 bits (64), Expect = 4.1 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +2 Query: 23 LSSPYQHHLRHNHHFPSS 76 +SSP+ HH H+HH P + Sbjct: 56 ISSPHHHHHHHHHHHPQT 73
>YF1M_CAEEL (Q21874) Hypothetical protein R09E10.5 precursor| Length = 1459 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 240 PMAVSPSAFSPLASDVLGYSSM*GIFT 320 PM + P FSP+ SDV G M G+ T Sbjct: 1431 PMTLEPRGFSPVPSDVRGSQGMLGLNT 1457
>VAL2_ICMV (Q08589) AL2 protein| Length = 135 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%) Frame = +2 Query: 29 SPYQHHLRHNH-------HFPSSTNPWQLITATTQKPM---KSNTIHLARHEPIHDQRTD 178 S Y H HNH H SS + W+L T+ P+ S R+EP H+ R D Sbjct: 40 SYYVHINCHNHGFTHRGTHHCSSGDEWRLYLGGTKSPLFQDHSTRQQTVRNEPGHNNRPD 99
>PANK1_HUMAN (Q8TE04) Pantothenate kinase 1 (EC 2.7.1.33) (Pantothenic acid| kinase 1) (hPanK1) (hPanK) Length = 598 Score = 28.9 bits (63), Expect = 5.4 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -2 Query: 425 QGARGVQEVRQPAGGDREADPRHEQGP 345 +G +G +EV + AGG E RH Q P Sbjct: 71 RGGQGAEEVGESAGGGEERRVRHPQAP 97
>C18AA_PAEPP (Q45358) Parasporal crystal protein cry18Aa (Parasporal| delta-endotoxin CryXVIIIA(a)) (Crystaline parasporal protoxin) (79 kDa crystal protein) Length = 706 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +2 Query: 116 PMKSNTIHLARHEPIHDQRTDDYRKKETKTM 208 P+ +NTI PI+ RTD +RKK T+ + Sbjct: 74 PIDNNTICSTDFTPINVMRTDPFRKKSTQEL 104
>HAIR_HUMAN (O43593) Protein hairless| Length = 1189 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Frame = -2 Query: 425 QGARGVQEVRQPAGGDREADP-RHEQGPGAQEPERARED 312 QGA G QEVR + G+++ D +H++ G Q+ + + +D Sbjct: 441 QGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQD 479
>SMG7_MOUSE (Q5RJH6) Protein SMG7 (SMG-7 homolog) (EST1-like protein C)| Length = 1138 Score = 28.1 bits (61), Expect = 9.2 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = +3 Query: 222 ETLLGMPMAVSPSAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLFMSRIRFSISTSRLP 398 E + P + P+ PLAS + G S + P +S S F+S FS++ R P Sbjct: 889 ELIFSNPPDLYPALLGPLAS-LPGRSLFKSLLEKPSELMSHSSSFLSLTGFSVNQERYP 946
>SCA4_RICPR (Q9ZD49) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) Length = 1022 Score = 28.1 bits (61), Expect = 9.2 Identities = 25/115 (21%), Positives = 39/115 (33%), Gaps = 7/115 (6%) Frame = +2 Query: 95 ITATTQKPMKSNTIHLARHE---PIHDQRTDDYRKKETKTMLSSDGDAVGDA-HGGEXXX 262 + A KP K ++ H P + + + + + DAV HGGE Sbjct: 245 LKADGTKPAKDKAVYFTAHYEEGPNGKPQLKEISSPQPLKFVGTGDDAVAYIEHGGEIYT 304 Query: 263 XXXXXXXXXXXXXXXXXLHGPVPVLERRV---LVHVEDPLLDLHQPAAEPLERLE 418 HG L + + L HV+ P + H+P P + LE Sbjct: 305 LAVTRGKYKEMMKEVALNHGQSVALSQTIAEDLTHVQGPSHETHKPIIIPNQELE 359
>VGF_RAT (P20156) Neurosecretory protein VGF precursor (VGF8a protein)| Length = 617 Score = 28.1 bits (61), Expect = 9.2 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 18/57 (31%) Frame = -2 Query: 422 GARGVQEVRQPAGGDREADPRHEQGPG------------------AQEPERAREDAL 306 G RG+QE +Q +RE + E+ G A+E ERAR++AL Sbjct: 350 GGRGLQETQQERENEREEEAEQERRGGGEDEVGEEDEEAAEAEAEAEEAERARQNAL 406
>DDLA_SHIFL (P0A6K0) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 126 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 260 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECOLI (P0A6J8) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 126 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 260 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECOL6 (Q8FKE3) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 126 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 260 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECO57 (P0A6J9) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 126 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 260 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>AHC1_YEAST (Q12433) Protein AHC1 (ADA HAT complex component 1)| Length = 566 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 8/44 (18%) Frame = +2 Query: 23 LSSPYQHHLRHNHHFPSS--------TNPWQLITATTQKPMKSN 130 + SP Q L+H HH P+S TN +Q+ T + + +++N Sbjct: 1 MMSPAQDKLQHQHHNPNSSSSSSSKMTNVYQVTTPKSPQDLENN 44 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,498,971 Number of Sequences: 219361 Number of extensions: 1043527 Number of successful extensions: 3978 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 3621 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3914 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
