>HB21_MOUSE (P04230) H-2 class II histocompatibility antigen, E-B beta chain|
           precursor
          Length = 264

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 514 PSMAAVR*ARWWPFGHCRSECGIFNTT 434
           P MA VR +R W   +C+SEC  +N T
Sbjct: 22  PPMALVRDSRPWFLEYCKSECHFYNGT 48

>GUN1_TRILO (Q12714) Endoglucanase EG-1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase)
          Length = 463

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +3

Query: 144 SQLPTTQPSC*QTHACQTQLTKLTPCTYF*LTQA*ACMYTNDHISKCV 287
           S   ++ PSC QTH  Q      T C     T    C Y ND+ S+C+
Sbjct: 418 SSTTSSSPSCTQTHWGQCGGIGYTGCKT--CTSGTTCQYGNDYYSQCL 463

>VG29_HAEIN (P44225) Mu-like prophage FluMu protein gp29|
          Length = 520

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 95  NPPAYMHSHDQRLRIILSTTNDPAKLLTN 181
           NP AYMHS       +LS   DP  LL N
Sbjct: 424 NPTAYMHSKADGKMAVLSVQPDPEDLLDN 452

>HB2I_MOUSE (P18468) H-2 class II histocompatibility antigen, I-A beta chain|
           precursor
          Length = 264

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 514 PSMAAVR*ARWWPFGHCRSECGIFNTT 434
           P +A VR +R W   +C+SEC  +N T
Sbjct: 22  PPVALVRDSRPWFLEYCKSECHFYNGT 48

>HB24_MOUSE (P20040) H-2 class II histocompatibility antigen, E-Q beta chain|
           precursor (E-W17)
          Length = 264

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 514 PSMAAVR*ARWWPFGHCRSECGIFNTT 434
           P +A VR +R W   +C+SEC  +N T
Sbjct: 22  PPVALVRDSRPWFLEYCKSECHFYNGT 48

>GUN1_TRIRE (P07981) Endoglucanase EG-1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase)
          Length = 459

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 144 SQLPTTQPSC*QTHACQTQLTKLTPCTYF*LTQA*ACMYTNDHISKCV 287
           S   ++ PSC QTH  Q      + C     T    C Y+ND+ S+C+
Sbjct: 414 SSTTSSSPSCTQTHWGQCGGIGYSGCKT--CTSGTTCQYSNDYYSQCL 459


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,112,770
Number of Sequences: 219361
Number of extensions: 1332324
Number of successful extensions: 3136
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3136
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)