>CGRE1_HUMAN (Q99674) Cell growth regulator with EF hand domain 1 (Cell growth|
           regulatory gene 11 protein)
          Length = 301

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 14/124 (11%)
 Frame = -3

Query: 501 VAIKHGLPGRHCVPK*SQIEDQARCRL-----------EAAVPGDRAATRHD*HREGA-P 358
           VA++H  PG    P   + +   R  L           EA  P + A  + +  RE   P
Sbjct: 145 VALRHVEPGEPLAPSPQEPQAVGRQSLLAKSPLRQETQEAPGPREEAKGQVEARRESLDP 204

Query: 357 EERPQASNRHDQAACSGTDPWPATKAEGQEEAERD--H*EDQAHKRASA*AVRPAPLAQA 184
            + P       QA   G  P P  +AEGQ EA+ D      +A  +A A    P P  +A
Sbjct: 205 VQEPGG-----QAEADGDVPGPRGEAEGQAEAKGDAPGPRGEAEGQAEAKGDAPGPRGEA 259

Query: 183 SNDA 172
              A
Sbjct: 260 GGQA 263

>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = -3

Query: 444 EDQARCRLEAAVPGDRAATRHD*HREGAPEERPQASNR--HDQAACSGTDPWPATKAEGQ 271
           + + R   EAAV   RA T  D    G P   P++ +   H   A S T PWP T  E  
Sbjct: 191 DPRTRVEAEAAV---RAGTAVDFIWTGNPRTAPRSLSLGGHTVRALSPTPPWPGTDDEDD 247

Query: 270 EEAERDH 250
           + A+ D+
Sbjct: 248 DLADVDY 254

>DCUP_RHILO (Q98DY6) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)|
          Length = 343

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
 Frame = -1

Query: 608 HLIRRFPEGLPVVEVKDSYPTVLDDLQALKASGD---VWWLSSMDSQEDIVYPNDP 450
           +LIR+   G  VV++ DS+  VLDD     AS D   VW ++ +  Q   V+P+ P
Sbjct: 188 YLIRQIEAGADVVQIFDSWSGVLDD-----ASFDQFCVWPVAEIVRQVQAVHPDVP 238

>CAAL_PSEPK (Q88HV0) Carboxylate-amine ligase PP3253 (EC 6.3.-.-)|
          Length = 368

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 590 PEGLPVVEVKDSYPTVLDDLQALKASGDVWW 498
           PE LP     + Y  +L    AL A GD+WW
Sbjct: 188 PEALPDWAAYERYRALLQRTGALAADGDLWW 218

>SRY_SMIMA (P36395) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 208

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 29  HKHQPQF*VLRCSKSFPPMMK*HKNRYRCACKNIIASSHMKKCPQTLYASLLAC 190
           +K+QP+    R +KSF   +  HK+    A   +I + H+K+   T+Y + + C
Sbjct: 101 YKYQPR----RKTKSFLKNVYNHKDHLTKATDQLIKTQHLKEDSTTIYENTMKC 150

>CHL1_ARATH (Q05085) Nitrate/chlorate transporter|
          Length = 590

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +3

Query: 339 WLVAVLQEL--LLDVNHVSWQLYLPVQLLQVGIELD 440
           WLVAVL  L  L+ +    W +Y   +L +VGIELD
Sbjct: 546 WLVAVLVALNFLIFLVFSKWYVYKEKRLAEVGIELD 581

>PARP1_XENLA (P31669) Poly [ADP-ribose] polymerase (EC 2.4.2.30) (PARP) (ADPRT)|
           (NAD(+) ADP-ribosyltransferase) (Poly[ADP-ribose]
           synthetase) (Fragment)
          Length = 998

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 164 FGGISSCESSQ*YFYMHNDIYFCVTSSLGERTCCISKLKT 45
           FG +  CE     F    D Y+C T  L   T C++K +T
Sbjct: 275 FGALLPCEECSGQFVFKGDAYYC-TGDLSAWTKCVAKTQT 313

>TRPA1_HUMAN (O75762) Transient receptor potential cation channel subfamily A|
            member 1 (Ankyrin-like with transmembrane domains protein
            1) (Transformation sensitive-protein p120)
          Length = 1119

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
 Frame = -1

Query: 506  VWWLSSMDSQEDIVYPNDPKSKIKL---------DADLKQLYREIELPRDMIDIEKELLK 354
            +W+L  +D +  IVYPN P+S   L           +++Q     E+P     +E E+LK
Sbjct: 992  LWFLRKVDQKSTIVYPNKPRSGGMLFHIFCFLFCTGEIRQ-----EIPNADKSLEMEILK 1046

Query: 353  NGHK 342
              ++
Sbjct: 1047 QKYR 1050

>YIHF_ECOLI (P32128) Hypothetical protein yihF|
          Length = 490

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 23/100 (23%), Positives = 47/100 (47%)
 Frame = -1

Query: 593 FPEGLPVVEVKDSYPTVLDDLQALKASGDVWWLSSMDSQEDIVYPNDPKSKIKLDADLKQ 414
           F E LP+++   S PT+   ++   A G+      +++  DI   +  KS    + D+K 
Sbjct: 349 FKEYLPLLQ--KSEPTIKQPVRWKNALGE------LNANLDISIADPAKSSSSTNKDIKS 400

Query: 413 LYREIELPRDMIDIEKELLKNGHKPATDTTKRRAAAQIHG 294
           L  +++LP +++    + L        +  +++A  QI G
Sbjct: 401 LNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKQADKQISG 440


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,145,985
Number of Sequences: 219361
Number of extensions: 1784006
Number of successful extensions: 5204
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5202
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)