ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags19i08 |
|---|---|
| Clone Library Name | barley_pub |
>RS19_ORYSA (P40978) 40S ribosomal protein S19| Length = 146 Score = 197 bits (500), Expect = 2e-50 Identities = 94/102 (92%), Positives = 98/102 (96%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKTARFKELPP D DWYY RAAS+ARKIYLRQGIG+GGFQKIYGGRQRNGSRPPHFCKSS Sbjct: 40 VKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSS 99 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 190 GA+SRNILQ+LQKMGIIDVDPKGGRLITSQGRRDLDQVAG V Sbjct: 100 GAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQVAGRV 141
>RS192_ARATH (Q9LF30) 40S ribosomal protein S19-2| Length = 143 Score = 161 bits (408), Expect = 8e-40 Identities = 74/105 (70%), Positives = 89/105 (84%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT R KEL P D DWYYIRAASMARKIYLR G+G+G F++IYGG +RNGSRPPHFCKSS Sbjct: 38 VKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSS 97 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 181 G ++R+ILQ+L+ M I+++D KGGR ITS G+RDLDQVAG + AE Sbjct: 98 GGIARHILQQLETMSIVELDTKGGRRITSSGQRDLDQVAGRIAAE 142
>RS193_ARATH (Q9FNP8) 40S ribosomal protein S19-3| Length = 143 Score = 161 bits (407), Expect = 1e-39 Identities = 74/104 (71%), Positives = 88/104 (84%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT + KEL P D DWYYIRAASMARK+YLR G+G+G F++IYGG +RNGSRPPHFCKSS Sbjct: 38 VKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSS 97 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 184 G V+R+ILQ+LQ M I+D+D KGGR ITS G+RDLDQVAG + A Sbjct: 98 GGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIAA 141
>RS191_ARATH (Q9SGA6) 40S ribosomal protein S19-1| Length = 143 Score = 158 bits (400), Expect = 7e-39 Identities = 71/105 (67%), Positives = 88/105 (83%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT + KEL P D DWYYIRAASMARK+YLR G+G+G F++IYGG +RNGSRPPHFCKSS Sbjct: 38 VKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSS 97 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 181 G ++R+ILQ+L+ M I+++D KGGR ITS G+RDLDQVAG + E Sbjct: 98 GGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGRIAVE 142
>RS19_MYAAR (Q94613) 40S ribosomal protein S19| Length = 149 Score = 134 bits (336), Expect = 2e-31 Identities = 58/102 (56%), Positives = 79/102 (77%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT FKEL P + DWY+IRAAS+ R +Y+R GIG F+KIYGGR+R G+ P HFCK++ Sbjct: 36 VKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAGIGSFEKIYGGRRRRGTAPSHFCKAN 95 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 190 G++SR +LQ L+ + I++ DP GGR +TSQGRRDLD++A + Sbjct: 96 GSISRRLLQSLEGLKIVEKDPNGGRRLTSQGRRDLDRIAAQI 137
>RS19_MYXGL (Q9Y0H3) 40S ribosomal protein S19| Length = 145 Score = 125 bits (315), Expect = 5e-29 Identities = 55/102 (53%), Positives = 76/102 (74%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VK + KEL P D DWYYIR AS+AR +Y+R G+G+G KIYGGRQRNG+RP H+ + S Sbjct: 37 VKLGKHKELAPFDIDWYYIRTASVARHLYMRGGVGVGAMTKIYGGRQRNGTRPSHYSRGS 96 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 190 V+R +LQ L+ + +++ DP GGR +TS G+RD+D++AG V Sbjct: 97 RNVARKVLQSLEMLKMVEKDPNGGRRLTSIGQRDMDRIAGQV 138
>RS19_RAT (P17074) 40S ribosomal protein S19| Length = 144 Score = 122 bits (305), Expect = 7e-28 Identities = 57/104 (54%), Positives = 75/104 (72%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VK A+ KEL P D +W+Y RAAS AR +YLR G G+G KIYGGRQRNG RP HF + S Sbjct: 36 VKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGS 95 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 184 +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 96 KSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_MOUSE (Q9CZX8) 40S ribosomal protein S19| Length = 144 Score = 122 bits (305), Expect = 7e-28 Identities = 57/104 (54%), Positives = 75/104 (72%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VK A+ KEL P D +W+Y RAAS AR +YLR G G+G KIYGGRQRNG RP HF + S Sbjct: 36 VKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGS 95 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 184 +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 96 KSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_GILMI (Q9DFR5) 40S ribosomal protein S19| Length = 147 Score = 121 bits (303), Expect = 1e-27 Identities = 57/104 (54%), Positives = 74/104 (71%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VK R KEL P+D +W+YIRAAS R +YLR G G+G KIYGGRQRNG P H+ + S Sbjct: 37 VKLGRHKELAPSDENWFYIRAASTVRHLYLRGGAGVGSMTKIYGGRQRNGVCPAHYSEGS 96 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 184 V+R +LQ L+ + +I+ DP GGR +T+QG RDLD++AG V A Sbjct: 97 KNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVSA 140
>RS19_EMENI (P27073) 40S ribosomal protein S19 (S16)| Length = 148 Score = 120 bits (300), Expect = 3e-27 Identities = 56/106 (52%), Positives = 77/106 (72%), Gaps = 1/106 (0%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT+ ELPP DADWYY+RAA++AR IYLR+ +G+G +K++G + GSRP H +S Sbjct: 37 VKTSASNELPPQDADWYYVRAAAVARHIYLRKTVGVGRLRKVHGSTKNRGSRPAHHVDAS 96 Query: 315 GAVSRNILQELQKMGIIDVD-PKGGRLITSQGRRDLDQVAGTVPAE 181 GAV R +LQ L+K+G+++ D KGGR IT G+RDLD++A T E Sbjct: 97 GAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRDLDRIAKTTVDE 142
>RS19_PONPY (Q5R8M9) 40S ribosomal protein S19| Length = 144 Score = 119 bits (299), Expect = 3e-27 Identities = 56/104 (53%), Positives = 74/104 (71%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VK A+ KEL P D +W+Y RAAS AR +YLR G G+G KIYGGRQRNG P HF + S Sbjct: 36 VKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 95 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 184 +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 96 KSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_HUMAN (P39019) 40S ribosomal protein S19| Length = 144 Score = 119 bits (299), Expect = 3e-27 Identities = 56/104 (53%), Positives = 74/104 (71%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VK A+ KEL P D +W+Y RAAS AR +YLR G G+G KIYGGRQRNG P HF + S Sbjct: 36 VKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 95 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 184 +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG V A Sbjct: 96 KSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAA 139
>RS19_ICTPU (Q90YQ4) 40S ribosomal protein S19| Length = 147 Score = 119 bits (297), Expect = 6e-27 Identities = 56/104 (53%), Positives = 73/104 (70%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VK A+ KEL P D +W+YIRAAS R +YLR G+G+G KIYGGR+RNG P HF S Sbjct: 39 VKLAKHKELAPCDDNWFYIRAASTVRHLYLRGGVGVGSMIKIYGGRKRNGVCPSHFSVGS 98 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 184 V+R +LQ L+ + +++ DP GGR +T QG RDLD++AG V A Sbjct: 99 KNVARKVLQALEALKMVEKDPNGGRRLTPQGTRDLDRIAGQVAA 142
>RS19_AEQIR (Q8ITC3) 40S ribosomal protein S19| Length = 144 Score = 118 bits (295), Expect = 1e-26 Identities = 50/102 (49%), Positives = 74/102 (72%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 +K ++F EL P D DW+Y RAAS+ R +Y+R G+G KIYG R+RNG+ P H+C+SS Sbjct: 36 IKLSKFNELSPYDEDWFYTRAASICRHLYIRSPAGVGALTKIYGDRKRNGTVPSHYCRSS 95 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 190 G+V+R +LQ L+ +++ D GGR +TSQG++DLD++A V Sbjct: 96 GSVARRVLQALETQKLVEKDANGGRKLTSQGQKDLDRIAAQV 137
>RS19_BRABE (Q8T5Z4) 40S ribosomal protein S19| Length = 147 Score = 117 bits (293), Expect = 2e-26 Identities = 55/102 (53%), Positives = 74/102 (72%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKTA KEL P D DW+Y+RAAS AR +Y+R G+G+G KIYGGR+R G++P F S Sbjct: 38 VKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGGRKRRGTKPAKFRVCS 97 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 190 VSR +LQ L+ + +++ D GGR +TSQG+RDLD++AG V Sbjct: 98 RGVSRTVLQSLEGIKMVEKDAAGGRRLTSQGQRDLDRIAGQV 139
>RS19_PIG (Q29308) 40S ribosomal protein S19 (Fragment)| Length = 135 Score = 116 bits (290), Expect = 4e-26 Identities = 54/100 (54%), Positives = 71/100 (71%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VK A KEL P D +W+Y RAAS AR +YLR G G+G KIYGGRQRNG P HF + S Sbjct: 36 VKLAXHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGS 95 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAG 196 +V+R +LQ L+ + +++ D GGR +T QG+RDLD++AG Sbjct: 96 KSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAG 135
>RS19_PAGMA (P61155) 40S ribosomal protein S19| Length = 146 Score = 115 bits (288), Expect = 6e-26 Identities = 54/104 (51%), Positives = 72/104 (69%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VK + KEL P+D +W+YIR+AS R +YLR G G+G KIYG RQRNG P H+ S Sbjct: 37 VKLGKHKELAPSDENWFYIRSASTVRHLYLRGGAGVGSMTKIYGSRQRNGVCPAHYSVGS 96 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPA 184 V+R +LQ L+ + +I+ DP GGR +T+QG RDLD++AG V A Sbjct: 97 KNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVAA 140
>RS19A_DROME (P39018) 40S ribosomal protein S19a| Length = 155 Score = 112 bits (281), Expect = 4e-25 Identities = 49/102 (48%), Positives = 70/102 (68%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKTA+FKEL P D DW+Y+R AS+ R +Y R G+G KIYGGR+RNG P HFC+++ Sbjct: 36 VKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAA 95 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 190 +R LQ L+ +++ P GGR ++S G+RDLD++A + Sbjct: 96 DGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRIANQI 137
>RS19A_SCHPO (P58234) 40S ribosomal protein S19-A (S16-A)| Length = 144 Score = 112 bits (279), Expect = 7e-25 Identities = 50/99 (50%), Positives = 69/99 (69%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT KEL P D DWYY+RAA++AR IYLR+ +G+G K+YGG G RP H S Sbjct: 37 VKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGS 96 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 199 G+V R ++Q L+K+G+++ GGR I+ QG+RDLD++A Sbjct: 97 GSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
>RS19B_SCHPO (P79016) 40S ribosomal protein S19-B (S16-B)| Length = 143 Score = 112 bits (279), Expect = 7e-25 Identities = 50/99 (50%), Positives = 69/99 (69%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT KEL P D DWYY+RAA++AR IYLR+ +G+G K+YGG G RP H S Sbjct: 37 VKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGS 96 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 199 G+V R ++Q L+K+G+++ GGR I+ QG+RDLD++A Sbjct: 97 GSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
>RS19B_DROME (Q7KS38) 40S ribosomal protein S19b| Length = 154 Score = 109 bits (273), Expect = 3e-24 Identities = 49/105 (46%), Positives = 69/105 (65%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 +KT +FKE PTD DW+Y R AS+ R +YLR G+G F K+Y GR+RNG RP C+SS Sbjct: 36 MKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSS 95 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 181 R LQ L+ +++ P GGR +T QG+R+LD++A + A+ Sbjct: 96 DGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRIANKIVAK 140
>RS19B_YEAST (P07281) 40S ribosomal protein S19-B (S16B) (YS16) (RP55)| Length = 143 Score = 109 bits (272), Expect = 5e-24 Identities = 49/100 (49%), Positives = 74/100 (74%), Gaps = 1/100 (1%) Frame = -1 Query: 495 VKTARFKELPPTDAD-WYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKS 319 VKT+ E+PP DA+ W+Y RAAS+AR IY+R+ +G+G K+YGG + G RP + Sbjct: 36 VKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDA 95 Query: 318 SGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 199 SG+++R +LQ L+K+GI+++ PKGGR I+ G+RDLD++A Sbjct: 96 SGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIA 135
>RS19A_YEAST (P07280) 40S ribosomal protein S19-A (S16A) (YS16) (RP55) (YP45)| Length = 143 Score = 109 bits (272), Expect = 5e-24 Identities = 49/100 (49%), Positives = 74/100 (74%), Gaps = 1/100 (1%) Frame = -1 Query: 495 VKTARFKELPPTDAD-WYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKS 319 VKT+ E+PP DA+ W+Y RAAS+AR IY+R+ +G+G K+YGG + G RP + Sbjct: 36 VKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDA 95 Query: 318 SGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 199 SG+++R +LQ L+K+GI+++ PKGGR I+ G+RDLD++A Sbjct: 96 SGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIA 135
>RS19S_ASCSU (P39698) 40S ribosomal protein S19S| Length = 150 Score = 105 bits (263), Expect = 5e-23 Identities = 47/100 (47%), Positives = 70/100 (70%), Gaps = 1/100 (1%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VK KEL P D+DWYY+R AS+AR++Y+R G+G +++YGG +R G P HF ++S Sbjct: 38 VKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGGNKRRGVTPNHFARAS 97 Query: 315 GAVSRNILQELQKMGIIDVDPKG-GRLITSQGRRDLDQVA 199 G+V R LQ L+ + ++ P G GR++T QGR+DLD++A Sbjct: 98 GSVIRKALQTLEAIKWVEKHPDGNGRILTKQGRKDLDRIA 137
>RS19E_AERPE (Q9YD22) 30S ribosomal protein S19e| Length = 153 Score = 99.4 bits (246), Expect = 5e-21 Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 1/105 (0%) Frame = -1 Query: 492 KTARFKELPPTDADWYYIRAASMARKIYLR-QGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 KT KE PPTD DW+Y+RAAS+ RK+Y + IGI F+ IYGGRQ GS P HF K+ Sbjct: 37 KTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAG 96 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 181 G+V R ILQ+L++ G++ P GR I+ GR LD A + E Sbjct: 97 GSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLDTTAREIMEE 141
>RS19_CAEEL (O18650) 40S ribosomal protein S19| Length = 146 Score = 97.1 bits (240), Expect = 2e-20 Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 1/100 (1%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VK KEL P D DW+Y RAAS+AR +Y R GIG F+K+YGG +R G P HF S+ Sbjct: 38 VKLGVNKELAPVDPDWFYTRAASLARHLYFRPA-GIGAFKKVYGGNKRRGVAPNHFQTSA 96 Query: 315 GAVSRNILQELQKMGIIDVDPKG-GRLITSQGRRDLDQVA 199 G R +Q+L+K+ ++ P G GR+++ QGR+DLD++A Sbjct: 97 GNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRIA 136
>RS19G_ASCSU (P24494) 40S ribosomal protein S19G (Eliminated protein NO. 1)| Length = 148 Score = 96.7 bits (239), Expect = 3e-20 Identities = 44/94 (46%), Positives = 65/94 (69%), Gaps = 1/94 (1%) Frame = -1 Query: 477 KELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSRN 298 KEL P ++DWYY+R AS+AR++Y+R G+ + +YGG +R G P HF K+SG+V R Sbjct: 44 KELAPLNSDWYYVRTASIARRLYVRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRK 103 Query: 297 ILQELQKMGIIDVDPKG-GRLITSQGRRDLDQVA 199 LQ L+ + + P G GR++T QGR+DLD++A Sbjct: 104 ALQTLEAIKWVQKHPDGNGRVLTKQGRKDLDRIA 137
>RS19E_ARCFU (O28210) 30S ribosomal protein S19e| Length = 147 Score = 94.7 bits (234), Expect = 1e-19 Identities = 48/115 (41%), Positives = 74/115 (64%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT KE P DW+Y+R AS+ R++Y+ +GI + YGGR+R GS+PP F K S Sbjct: 33 VKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGS 92 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SVEVPSMK 151 GA+ RN L +L+++G + + GR++T GR LD+VA + +E S E+P+++ Sbjct: 93 GAIVRNALHQLEQLGFVK-KTREGRVVTPMGRSFLDKVATELKSELVS-EIPALE 145
>RS19E_METJA (P54057) 30S ribosomal protein S19e| Length = 148 Score = 94.4 bits (233), Expect = 2e-19 Identities = 48/114 (42%), Positives = 71/114 (62%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT +E P DW+YIR AS+ RKIY+ +G+ + YGGR+ G P HF K S Sbjct: 34 VKTGVSRERRPDQDDWWYIRCASILRKIYIYGPVGVSRLRTAYGGRKNRGHEPEHFYKGS 93 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SVEVPSM 154 G + R LQEL+K+G+++ P+ GR++T +GR LD +A V E + E+P++ Sbjct: 94 GNIIRKALQELEKLGLVEKTPE-GRVVTPKGRSFLDNIAKEVRDEIIN-EIPAL 145
>RS19_ENTHI (O15631) 40S ribosomal protein S19| Length = 148 Score = 93.2 bits (230), Expect = 3e-19 Identities = 46/99 (46%), Positives = 65/99 (65%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT KEL P + DW YIRAA++ARK+YL GIG+ ++ YG + P H S Sbjct: 38 VKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGS 97 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 199 G V+R ILQ+L+KMGI+ + GR +T +GR+D+D++A Sbjct: 98 GKVNRYILQQLEKMGIVG-KIQSGRSLTKEGRKDMDKIA 135
>RS19E_METTH (O27653) 30S ribosomal protein S19e| Length = 145 Score = 89.0 bits (219), Expect = 6e-18 Identities = 44/110 (40%), Positives = 69/110 (62%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT KE P + DW+Y+RAA++ R++Y+ +G+ + YGG++ GSRP F + S Sbjct: 35 VKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGS 94 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SVE 166 GA+ R LQ+L++ G+I + + GR+IT +GR LD+ A V E +E Sbjct: 95 GAIIRRALQQLEESGLIKRE-ENGRVITPEGRSFLDKAAAEVKKEVEGLE 143
>RS19E_PYRHO (O59041) 30S ribosomal protein S19e| Length = 150 Score = 89.0 bits (219), Expect = 6e-18 Identities = 44/115 (38%), Positives = 67/115 (58%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT R KE P DW+Y R AS+ R++Y+ +GI + YGGR+ G P F K+ Sbjct: 35 VKTGRHKERLPEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAG 94 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAEF*SVEVPSMK 151 G++ R LQ+L+ G I+ P GR++T +GR LD++A + E + +P +K Sbjct: 95 GSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKIATELKKELEEI-IPELK 148
>RS19E_THEVO (Q97CU4) 30S ribosomal protein S19e| Length = 150 Score = 72.4 bits (176), Expect = 6e-13 Identities = 38/99 (38%), Positives = 54/99 (54%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT KE PP DW Y+RAASM RK+Y+ +GI YGG+ GS+ H S Sbjct: 35 VKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGS 94 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 199 +++R + EL+ G++ K GR ++ QG LD + Sbjct: 95 RSITRFLFHELESAGLVQKTQK-GRSLSPQGMSLLDNAS 132
>RS19E_THEAC (Q9HM21) 30S ribosomal protein S19e| Length = 150 Score = 71.6 bits (174), Expect = 1e-12 Identities = 37/99 (37%), Positives = 55/99 (55%) Frame = -1 Query: 495 VKTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSS 316 VKT +E P + DW Y+RAA+M RK+Y+ +GI YGG+ GS+ H + S Sbjct: 35 VKTGISREKSPVNRDWIYVRAAAMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAAQGS 94 Query: 315 GAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVA 199 ++ R + EL+K G + PK GR ++ QG LD + Sbjct: 95 RSIIRYLFHELEKAGYVQKTPK-GRSLSPQGMSLLDNAS 132
>RS19E_HALMA (P19952) 30S ribosomal protein S19e (HS12) (E1.3)| Length = 152 Score = 65.5 bits (158), Expect = 8e-11 Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 4/108 (3%) Frame = -1 Query: 492 KTARFKELPPTDADWYYIRAASMARKIYLRQGIGIGGFQKIYG----GRQRNGSRPPHFC 325 KT +ELPP D++ RAAS+ RK+ + +G+ + YG G R RP Sbjct: 35 KTGVDRELPPEQEDFWTRRAASLLRKVAVDGPVGVNALRSEYGTSKQGTTRYRVRPHQKT 94 Query: 324 KSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTVPAE 181 K SG + R LQ+L+ G ++ GR +T GR LD AG + E Sbjct: 95 KGSGNIIRTALQQLEDAGYVETSENDGRRVTGDGRSLLDDTAGDLLTE 142
>LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late envelope protein| 1) Length = 110 Score = 31.6 bits (70), Expect = 1.2 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = +3 Query: 279 SATPEGCCGKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 428 S + GCCG C S GG S HHR H+ + +SG S PS Sbjct: 45 SVSSGGCCGSSSGGGCSSGGGGCCLS--HHRRHRSHRHRLQSSGCCSQPS 92
>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3703 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +2 Query: 128 PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPWEVMSLPPLGS 259 P+P + T+++ +SAG P++ S++P E + +PPLG+ Sbjct: 1652 PSPVSTSGSNTFTTSNPSSAGIAPSSNLLSQVPTESVGMPPLGN 1695
>STP2_CANFA (O77645) Nuclear transition protein 2 (TP-2) (TP2)| Length = 129 Score = 30.8 bits (68), Expect = 2.1 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 9/61 (14%) Frame = +3 Query: 276 SSATPEG--C--CGKQHHC-----SCRSVGGVNRSSDGHHRSSGIHQSQFPASGRSSLPS 428 S++ P+G C C HC SC ++S GHH SSG HQSQ P +LP Sbjct: 17 SNSRPQGHTCSQCTCSSHCQTCSQSCSQSRSSSQSPTGHHSSSG-HQSQSP---HPTLPP 72 Query: 429 R 431 R Sbjct: 73 R 73
>TRPF_SACKU (Q5XQP9) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 226 Score = 30.8 bits (68), Expect = 2.1 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -1 Query: 330 FCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 190 F + G N+ LQ G+I VD GG + + G +D+D++ V Sbjct: 175 FMLAGGLTPENVSDALQLHGVIGVDVSGG--VETNGMKDMDKITNFV 219
>LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late envelope protein| 3) Length = 118 Score = 30.4 bits (67), Expect = 2.7 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Frame = +3 Query: 279 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 428 S + GCCG SC S G SS G HHR H + +SG S PS Sbjct: 45 SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100
>LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late envelope protein| 2) (Small proline-rich-like epidermal differentiation complex protein 2A) Length = 118 Score = 30.4 bits (67), Expect = 2.7 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Frame = +3 Query: 279 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 428 S + GCCG SC S G SS G HHR H + +SG S PS Sbjct: 45 SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPS 100
>LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late envelope protein| 6) Length = 118 Score = 30.0 bits (66), Expect = 3.5 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Frame = +3 Query: 279 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPSRQP* 440 S + GCCG C S GG SS G HHR H+ + +S S PS Sbjct: 45 SVSSGGCCGSSSGGCCSSGGGGCCSSGGGGCCLSHHRRRRSHRHRPQSSDCCSQPSAGSS 104 Query: 441 C 443 C Sbjct: 105 C 105
>YDHC_BACSU (O05494) Hypothetical transcriptional regulator ydhC| Length = 224 Score = 29.3 bits (64), Expect = 6.0 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 7/77 (9%) Frame = -1 Query: 372 IYGGRQRNGSR--PPHFCKSSGAVSRNILQE----LQKMGIIDVDPKGGRLITSQGRRDL 211 I+ G + G R KS G VSR+ ++E L+K G++ D + G ITS +D+ Sbjct: 24 IFNGTFKPGERINETQLAKSFG-VSRSPIREAMRLLEKDGLLKADDRNGFSITSLTAKDV 82 Query: 210 DQVAG-TVPAEF*SVEV 163 D++ +P E +VE+ Sbjct: 83 DEIYKIRIPLEQLAVEL 99
>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 932 Score = 29.3 bits (64), Expect = 6.0 Identities = 20/42 (47%), Positives = 22/42 (52%) Frame = +3 Query: 348 RSSDGHHRSSGIHQSQFPASGRSSLPSRQP*CSTSQRQ*AAA 473 R SDG SS Q Q SLP R+P STSQ+ AAA Sbjct: 647 RQSDGTPYSSA--QPQRDTRSIGSLPEREPSASTSQKDLAAA 686
>DDL_MYCSM (Q9ZGN0) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 373 Score = 29.3 bits (64), Expect = 6.0 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = -1 Query: 372 IYGGRQRNGSRPPHFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGT 193 +YGGR S C S+G++ RN+ E ++ I + P G ++T L G Sbjct: 16 VYGGRS---SEHAISCVSAGSILRNLDPERFEVVAIGITPDGSWVLTDGRPETLAITDGK 72 Query: 192 VPA 184 +PA Sbjct: 73 LPA 75
>PPGK_MYCLE (Q49988) Polyphosphate glucokinase (EC 2.7.1.63)| (Polyphosphate--glucose phosphotransferase) Length = 324 Score = 29.3 bits (64), Expect = 6.0 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +2 Query: 110 HNSKL*PNPTTEHNFIDGTSTDQNSAGTVPATWSRSRLPW 229 HN KL PN H +DG +Q +A +V + S W Sbjct: 218 HNGKLIPNTEFGHLEVDGKEAEQRAASSVKDKYKWSYRTW 257
>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Clox) (Clox-1) (Fragment) Length = 975 Score = 29.3 bits (64), Expect = 6.0 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +3 Query: 303 GKQHHCSCRSVGGVNRSSDGHHRSSGIHQSQFPASGR--SSLPS 428 G + + S + GG R+ DG HRSS + + PA+ R SSL S Sbjct: 885 GGRRYLSRPARGGPCRARDGAHRSSALPSTSAPAAARRPSSLQS 928
>LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late envelope protein| 5) Length = 118 Score = 29.3 bits (64), Expect = 6.0 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Frame = +3 Query: 279 SATPEGCCGKQHHCSCRSVGGVNRSSDG------HHRSSGIHQSQFPASGRSSLPS 428 S + GCCG SC S G SS G HHR H+ + +S S PS Sbjct: 45 SVSSGGCCGSSSGGSCGSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCCSQPS 100
>TRPF_YEAST (P00912) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 224 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -1 Query: 333 HFCKSSGAVSRNILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV 190 HF + G N+ L+ G+I VD GG + + G +D +++A V Sbjct: 174 HFMLAGGLTPENVGDALRLNGVIGVDVSGG--VETNGVKDSNKIANFV 219
>S26A3_RAT (Q924C9) Chloride anion exchanger (DRA protein) (Down-regulated in| adenoma) (Solute carrier family 26 member 3) Length = 757 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = -1 Query: 294 LQELQKMGIIDVDPKGGRLITSQGRRDLDQ 205 +++LQK G+I V PK G + TS G +D D+ Sbjct: 571 IRKLQKQGLIQVTPK-GFICTSDGFKDSDE 599 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,347,713 Number of Sequences: 219361 Number of extensions: 1478096 Number of successful extensions: 4533 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 4356 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4516 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
