ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags19i02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001016362.2| Xenopus tropicalis hypothetical protein LOC549116 (LOC549116), mRNA Length = 964 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 gtgtttaagacagataca 25 |||||||||||||||||| Sbjct: 499 gtgtttaagacagataca 516
>ref|NM_001015857.1| Xenopus tropicalis MGC108272 protein (MGC108272), mRNA Length = 2340 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 gtgtttaagacagataca 25 |||||||||||||||||| Sbjct: 395 gtgtttaagacagataca 412
>gb|BC090367.1| Xenopus tropicalis MGC108272 protein, mRNA (cDNA clone MGC:108272 IMAGE:7018265), complete cds Length = 2340 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 gtgtttaagacagataca 25 |||||||||||||||||| Sbjct: 395 gtgtttaagacagataca 412
>emb|CR761295.2| Xenopus tropicalis finished cDNA, clone TEgg072n04 Length = 964 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 gtgtttaagacagataca 25 |||||||||||||||||| Sbjct: 499 gtgtttaagacagataca 516
>emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on chromosome 2, complete sequence Length = 230161 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 gtgtttaagacagataca 25 |||||||||||||||||| Sbjct: 227964 gtgtttaagacagataca 227947
>gb|AC163697.3| Gallus gallus BAC clone CH261-186A14 from chromosome unknown, complete sequence Length = 224517 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 gtttaagacagatacact 27 |||||||||||||||||| Sbjct: 27815 gtttaagacagatacact 27832
>gb|AC159009.2| Gallus gallus BAC clone CH261-189M12 from chromosome unknown, complete sequence Length = 211745 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 gtttaagacagatacact 27 |||||||||||||||||| Sbjct: 112700 gtttaagacagatacact 112717 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 202,949 Number of Sequences: 3902068 Number of extensions: 202949 Number of successful extensions: 42176 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42166 Number of HSP's gapped (non-prelim): 10 length of query: 46 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 26 effective length of database: 17,155,003,908 effective search space: 446030101608 effective search space used: 446030101608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
