| Clone Name | rbags19h20 |
|---|---|
| Clone Library Name | barley_pub |
>PHK_SCHPO (O74770) Probable phosphoketolase (EC 4.1.2.-)| Length = 825 Score = 32.3 bits (72), Expect = 1.3 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 498 PDMLVNSVHGDGCTSSAPPLTAWHFH 575 PD++V V GDG + P T+WH H Sbjct: 206 PDLIVTCVVGDGEAETGPTATSWHAH 231
>MATK_CARAB (Q9TKP0) Maturase K (Intron maturase)| Length = 503 Score = 31.2 bits (69), Expect = 2.8 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -3 Query: 454 CTSISVSTSGEMASKGRPNMFLFAYYYYIC 365 C S ST SK P +FLF Y +Y+C Sbjct: 185 CNWNSFSTPKSTFSKSNPRLFLFLYNFYVC 214
>PHK1_ANASP (Q8YWW1) Probable phosphoketolase 1 (EC 4.1.2.-)| Length = 808 Score = 31.2 bits (69), Expect = 2.8 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +3 Query: 498 PDMLVNSVHGDGCTSSAPPLTAWH 569 PD++V +V GDG + P TAWH Sbjct: 176 PDLIVTAVIGDGEAETGPLATAWH 199
>PHK_SYNEL (Q8DJN6) Probable phosphoketolase (EC 4.1.2.-)| Length = 812 Score = 31.2 bits (69), Expect = 2.8 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +3 Query: 498 PDMLVNSVHGDGCTSSAPPLTAWHFH 575 PD++V +V GDG +AP T+WH + Sbjct: 185 PDLIVAAVVGDGEAETAPLATSWHIN 210
>CED11_CAEEL (P34641) Protein ced-11 (Cell death protein 11)| Length = 1418 Score = 31.2 bits (69), Expect = 2.8 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%) Frame = +2 Query: 125 PRPSPLWILCLSCQLRLVYFGGYPRYDSNNDPLHTPSRLKCGN--KHDSLTRNRGALWTS 298 P P PL I CL C + + + S+ D +R KC K S+ RN + Sbjct: 1037 PLPPPLTIFCLICSACCRFSNSFSGFFSDFDHPDFEARDKCRTTWKFGSIYRNPSVPFKR 1096 Query: 299 IEPPDS----ISLVEFDSSDAKHKVSAN 370 E +S +S+ ++ ++ K K+SAN Sbjct: 1097 NEFVNSFWRKLSMEQWKNTQQKAKISAN 1124
>PHK_PARUW (Q6MFC0) Probable phosphoketolase (EC 4.1.2.-)| Length = 798 Score = 30.4 bits (67), Expect = 4.9 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +3 Query: 498 PDMLVNSVHGDGCTSSAPPLTAWH 569 PD++V V GDG + P TAWH Sbjct: 170 PDLIVGCVIGDGEAETGPLATAWH 193
>SYY_PSEHT (Q3II62) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 420 Score = 30.4 bits (67), Expect = 4.9 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +3 Query: 429 EVETEIEVQDLIQHQREFVQKLIPDMLVNSVHGDGCTSSAPPLTAWHFHGRTGAL 593 E+E IE D+ Q+ Q ++ + L VHG+ +SA +T F+G+ L Sbjct: 279 EIEA-IEANDITSQQKPQAQGILAEQLTRFVHGEQGLASAQRITQLLFNGQVQTL 332
>MATK_MELID (Q8MCP4) Maturase K (Intron maturase)| Length = 506 Score = 29.6 bits (65), Expect = 8.3 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -3 Query: 445 ISVSTSGEMASKGRPNMFLFAYYYYIC 365 I+ S SK P +FLF Y++Y+C Sbjct: 191 ITTKKSISTFSKSNPRLFLFLYHFYVC 217
>AT10D_HUMAN (Q9P241) Probable phospholipid-transporting ATPase VD (EC 3.6.3.1)| (ATPVD) Length = 1426 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 188 GYPRYDSNNDPLHTPSRLKCGNKHDSLTRNRGAL 289 GY DS DP SR++C + ++ L+R RG L Sbjct: 226 GYAEQDSEVDPEKFSSRIECESPNNDLSRFRGFL 259
>PHK_RHOBA (Q7UH14) Probable phosphoketolase (EC 4.1.2.-)| Length = 793 Score = 29.6 bits (65), Expect = 8.3 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +3 Query: 498 PDMLVNSVHGDGCTSSAPPLTAWH 569 PD++V V GDG + P TAWH Sbjct: 165 PDLIVACVVGDGEAETGPLATAWH 188
>PHK_METCA (Q608B0) Probable phosphoketolase (EC 4.1.2.-)| Length = 811 Score = 29.6 bits (65), Expect = 8.3 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +3 Query: 498 PDMLVNSVHGDGCTSSAPPLTAWHFH 575 PD++V +V GDG + P T+WH + Sbjct: 184 PDLIVAAVVGDGEAETGPLATSWHIN 209
>AT10D_MOUSE (Q8K2X1) Probable phospholipid-transporting ATPase VD (EC 3.6.3.1)| (ATPVD) Length = 1416 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 188 GYPRYDSNNDPLHTPSRLKCGNKHDSLTRNRGAL 289 GY DS DP SR++C + ++ L+R RG L Sbjct: 226 GYTEQDSEVDPEKFSSRIECESPNNDLSRFRGFL 259 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,369,982 Number of Sequences: 219361 Number of extensions: 2161168 Number of successful extensions: 5459 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5288 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5459 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)