| Clone Name | rbags19h18 |
|---|---|
| Clone Library Name | barley_pub |
>FAD6E_BRAJU (Q39287) Omega-6 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) (Delta-12 desaturase) Length = 384 Score = 62.0 bits (149), Expect = 7e-10 Identities = 27/37 (72%), Positives = 31/37 (83%), Gaps = 3/37 (8%) Frame = -3 Query: 466 FDGTPVAKATWREAKECIYVEPE---DRKGVFWYSNK 365 FDGTP KA WREAKECIYVEP+ ++KGVFWY+NK Sbjct: 347 FDGTPWVKAMWREAKECIYVEPDRQGEKKGVFWYNNK 383
>FD6E2_SOYBN (P48631) Omega-6 fatty acid desaturase, endoplasmic reticulum| isozyme 2 (EC 1.14.19.-) Length = 383 Score = 57.4 bits (137), Expect = 2e-08 Identities = 25/37 (67%), Positives = 29/37 (78%), Gaps = 3/37 (8%) Frame = -3 Query: 466 FDGTPVAKATWREAKECIYVEPE---DRKGVFWYSNK 365 FD TP KA WREA+ECIYVEP+ + KGVFWY+NK Sbjct: 346 FDETPFVKAMWREARECIYVEPDQSTESKGVFWYNNK 382
>FD6E1_SOYBN (P48630) Omega-6 fatty acid desaturase, endoplasmic reticulum| isozyme 1 (EC 1.14.19.-) Length = 387 Score = 55.8 bits (133), Expect = 5e-08 Identities = 23/38 (60%), Positives = 29/38 (76%), Gaps = 3/38 (7%) Frame = -3 Query: 466 FDGTPVAKATWREAKECIYVEPED---RKGVFWYSNKF 362 FD TP KA WREA+EC+YVEP++ KGV+WY NK+ Sbjct: 350 FDDTPFYKALWREARECLYVEPDEGTSEKGVYWYRNKY 387
>FAD6E_ARATH (P46313) Omega-6 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) (Delta-12 desaturase) Length = 383 Score = 55.5 bits (132), Expect = 7e-08 Identities = 25/37 (67%), Positives = 30/37 (81%), Gaps = 3/37 (8%) Frame = -3 Query: 466 FDGTPVAKATWREAKECIYVEPE---DRKGVFWYSNK 365 FDGTP A +REAKECIYVEP+ D+KGV+WY+NK Sbjct: 346 FDGTPWYVAMYREAKECIYVEPDREGDKKGVYWYNNK 382
>FAD12_CREAL (O81931) Delta(12) fatty acid dehydrogenase (EC 1.14.99.33)| (Crepenynate synthase) (Delta-12 fatty acid acetylenase) Length = 375 Score = 51.6 bits (122), Expect = 1e-06 Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 3/37 (8%) Frame = -3 Query: 463 DGTPVAKATWREAKECIYVEPE---DRKGVFWYSNKF 362 D TP+ KA WREAKECI++EPE KGV+WY NKF Sbjct: 340 DRTPILKAMWREAKECIFIEPEKGRGSKGVYWY-NKF 375
>TTC7B_HUMAN (Q86TV6) Tetratricopeptide repeat protein 7B (Tetratricopeptide| repeat protein 7-like-1) Length = 741 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +3 Query: 267 KLTICR*MDGLLVRTSSLSSSWNTADDDPCG*NLLLYQKTPLRSSGST*MHSLASR 434 ++TI R + +L+R S WN +D PC L PLR +T ++L R Sbjct: 156 RMTIARQLAEILLRGMCEQSYWNPLEDPPCQSPL----DDPLRKGANTKTYTLTRR 207 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,397,614 Number of Sequences: 219361 Number of extensions: 950444 Number of successful extensions: 2286 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2237 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2282 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)