ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19h17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY107857.1| Zea mays PCO113823 mRNA sequence 167 5e-38
2gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome... 88 3e-14
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 88 3e-14
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 88 3e-14
7emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003... 88 3e-14
8gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 44 0.45
9emb|AL390838.26| Human DNA sequence from clone RP11-158D2 on chr... 44 0.45
10gb|AC026130.15| Homo sapiens chromosome 17, clone RP11-801J18, c... 44 0.45
11gb|AC025518.8| Homo sapiens chromosome 17, clone RP11-713H12, co... 44 0.45
12emb|CT025599.16| Mouse DNA sequence from clone RP24-254G12 on ch... 44 0.45
13gb|AC164607.4| Mus musculus chromosome 5, clone RP23-455A10, com... 42 1.8
14emb|AL445669.9| Human DNA sequence from clone RP11-163G10 on chr... 42 1.8
15gb|AC154678.2| Mus musculus BAC clone RP24-302G10 from chromosom... 42 1.8
16gb|AC133584.12| Mus musculus chromosome 5, clone RP24-448L9, com... 42 1.8
17ref|XM_414355.1| PREDICTED: Gallus gallus similar to anion excha... 40 7.1
18gb|AC149486.1| Populus trichocarpa clone Pop1-8L22, complete seq... 40 7.1
19gb|AC149543.1| Populus trichocarpa clone Pop1-47M20, complete se... 40 7.1
20gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, com... 40 7.1
21gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complet... 40 7.1
22emb|AL163206.2|HS21C006 Homo sapiens chromosome 21 segment HS21C006 40 7.1
23emb|AL135787.13| Human DNA sequence from clone RP11-16L21 on chr... 40 7.1
24emb|AL121915.8|HSJ1193N1 Human DNA sequence from clone RP5-1193N... 40 7.1
25emb|AL034408.2|HS710L4 Human DNA sequence from clone RP4-710L4 o... 40 7.1
26gb|AC078906.6| Homo sapiens, clone RP11-142A23, complete sequence 40 7.1
27emb|BX930511.2| Gallus gallus finished cDNA, clone ChEST619h11 40 7.1
28gb|AC137518.1| Genomic sequence for Arabidopsis thaliana, clone ... 40 7.1
29gb|AF130358.2|AF130358 Homo sapiens chromosome 21q11.2 PAC 90B5,... 40 7.1
30dbj|BS000009.1| Pan troglodytes chromosome 22 clone:PTB-118J15, ... 40 7.1
31ref|XM_309351.2| Anopheles gambiae str. PEST ENSANGP00000015015 ... 40 7.1
32ref|XM_564195.1| Anopheles gambiae str. PEST ENSANGP00000028864 ... 40 7.1
33ref|XM_564194.1| Anopheles gambiae str. PEST ENSANGP00000028392 ... 40 7.1
34gb|AC006556.3|AC006556 Homo sapiens, clone hRPK.37_A_1, complete... 40 7.1
35dbj|AP001376.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.1
36dbj|AP000742.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 7.1
37dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.1
38gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, c... 40 7.1

>gb|AY107857.1| Zea mays PCO113823 mRNA sequence
          Length = 677

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Minus

                                                                       
Query: 339 tgagctttatatgacaaaatcacgttccatgcaagggctacaaaattagcggcaagaacc 398
           ||||||||| |||| |||||||| ||||||||||||||||||||||||||  |||| |||
Sbjct: 352 tgagctttaaatgataaaatcacattccatgcaagggctacaaaattagcaccaaggacc 293

                                                                       
Query: 399 tggagcttctgtgggacaaaatagaaattcaaaaactggaacggtatccacaattgccaa 458
           || | |||||| || || || || |||||||||||||| || |||||||| |||||||||
Sbjct: 292 tgaaacttctgaggaacgaagtaaaaattcaaaaactgaaatggtatccataattgccaa 233

                                                                       
Query: 459 ttcgcgatcaatgaagagaaccactcctgcttaagctttggcactacaagtgatggcttt 518
           ||||| | || ||| || ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 232 ttcgccaacactgatgataaccattcctgcttaagctttggcaccacaagagagggcttt 173

               
Query: 519 ccct 522
           ||||
Sbjct: 172 ccct 169



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>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0035B18, complete sequence
          Length = 123425

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                         
Query: 408   tgtgggacaaaatagaaattcaaaaactggaacggtatccacaattgccaattcgcgatc 467
             ||||||||||| || |||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 50780 tgtgggacaaagtaaaaattcaagaactgaaagggtatccacaattgccaattcgcaatc 50839

                                 
Query: 468   aatgaagagaaccactcctg 487
             | ||| || |||||||||||
Sbjct: 50840 actgatgataaccactcctg 50859



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                         
Query: 339   tgagctttatatgacaaaatcacgttccatgcaagggctacaaaattagcggcaagaacc 398
             ||||||||| |||| | |||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 50575 tgagctttaaatgatagaatcacgttccacgcaagggctacaaaattagcagcaagaacc 50634

                 
Query: 399   tgga 402
             ||||
Sbjct: 50635 tgga 50638



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                           
Query: 339     tgagctttatatgacaaaatcacgttccatgcaagggctacaaaattagcggcaagaacc 398
               ||||||||| |||| | |||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 1336385 tgagctttaaatgatagaatcacgttccacgcaagggctacaaaattagcagcaagaacc 1336444

                   
Query: 399     tgga 402
               ||||
Sbjct: 1336445 tgga 1336448



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                           
Query: 408     tgtgggacaaaatagaaattcaaaaactggaacggtatccacaattgccaattcgcgatc 467
               ||||||||||| || |||||||| ||||| || |||||||||||||||||||| || |||
Sbjct: 1336594 tgtgggacaaagtaaaaattcaagaactgaaaaggtatccacaattgccaatttgcaatc 1336653

                                   
Query: 468     aatgaagagaaccactcctg 487
               | ||| || |||||||||||
Sbjct: 1336654 actgatgataaccactcctg 1336673



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                           
Query: 408     tgtgggacaaaatagaaattcaaaaactggaacggtatccacaattgccaattcgcgatc 467
               ||||||||||| || |||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 1431985 tgtgggacaaagtaaaaattcaagaactgaaagggtatccacaattgccaattcgcaatc 1432044

                                   
Query: 468     aatgaagagaaccactcctg 487
               | ||| || |||||||||||
Sbjct: 1432045 actgatgataaccactcctg 1432064



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                           
Query: 339     tgagctttatatgacaaaatcacgttccatgcaagggctacaaaattagcggcaagaacc 398
               ||||||||| |||| | |||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 1431780 tgagctttaaatgatagaatcacgttccacgcaagggctacaaaattagcagcaagaacc 1431839

                   
Query: 399     tgga 402
               ||||
Sbjct: 1431840 tgga 1431843



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                           
Query: 408     tgtgggacaaaatagaaattcaaaaactggaacggtatccacaattgccaattcgcgatc 467
               ||||||||||| || |||||||| ||||| || ||||||||||||||||||||||| |||
Sbjct: 1429706 tgtgggacaaagtaaaaattcaagaactgaaagggtatccacaattgccaattcgcaatc 1429765

                                   
Query: 468     aatgaagagaaccactcctg 487
               | ||| || |||||||||||
Sbjct: 1429766 actgatgataaccactcctg 1429785



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                           
Query: 339     tgagctttatatgacaaaatcacgttccatgcaagggctacaaaattagcggcaagaacc 398
               ||||||||| |||| | |||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 1429501 tgagctttaaatgatagaatcacgttccacgcaagggctacaaaattagcagcaagaacc 1429560

                   
Query: 399     tgga 402
               ||||
Sbjct: 1429561 tgga 1429564



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                           
Query: 339     tgagctttatatgacaaaatcacgttccatgcaagggctacaaaattagcggcaagaacc 398
               ||||||||| |||| | |||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 1336385 tgagctttaaatgatagaatcacgttccacgcaagggctacaaaattagcagcaagaacc 1336444

                   
Query: 399     tgga 402
               ||||
Sbjct: 1336445 tgga 1336448



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                           
Query: 408     tgtgggacaaaatagaaattcaaaaactggaacggtatccacaattgccaattcgcgatc 467
               ||||||||||| || |||||||| ||||| || |||||||||||||||||||| || |||
Sbjct: 1336594 tgtgggacaaagtaaaaattcaagaactgaaaaggtatccacaattgccaatttgcaatc 1336653

                                   
Query: 468     aatgaagagaaccactcctg 487
               | ||| || |||||||||||
Sbjct: 1336654 actgatgataaccactcctg 1336673



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>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157453

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                         
Query: 339   tgagctttatatgacaaaatcacgttccatgcaagggctacaaaattagcggcaagaacc 398
             ||||||||| |||| | |||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 92784 tgagctttaaatgatagaatcacgttccacgcaagggctacaaaattagcagcaagaacc 92725

                 
Query: 399   tgga 402
             ||||
Sbjct: 92724 tgga 92721



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                         
Query: 408   tgtgggacaaaatagaaattcaaaaactggaacggtatccacaattgccaattcgcgatc 467
             ||||||||||| || |||||||| ||||| || |||||||||||||||||||| || |||
Sbjct: 92575 tgtgggacaaagtaaaaattcaagaactgaaaaggtatccacaattgccaatttgcaatc 92516

                                 
Query: 468   aatgaagagaaccactcctg 487
             | ||| || |||||||||||
Sbjct: 92515 actgatgataaccactcctg 92496



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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 484   cctgcttaagctttggcactac 505
             ||||||||||||||||||||||
Sbjct: 15628 cctgcttaagctttggcactac 15607



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>emb|AL390838.26| Human DNA sequence from clone RP11-158D2 on chromosome 9 Contains a novel
              pseudogene and a novel gene, complete sequence
          Length = 193709

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 63     ggaaaccaggaacaagcttcca 84
              ||||||||||||||||||||||
Sbjct: 139517 ggaaaccaggaacaagcttcca 139496



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>gb|AC026130.15| Homo sapiens chromosome 17, clone RP11-801J18, complete sequence
          Length = 182909

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 63    ggaaaccaggaacaagcttcca 84
             ||||||||||||||||||||||
Sbjct: 41503 ggaaaccaggaacaagcttcca 41524



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>gb|AC025518.8| Homo sapiens chromosome 17, clone RP11-713H12, complete sequence
          Length = 176355

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 63     ggaaaccaggaacaagcttcca 84
              ||||||||||||||||||||||
Sbjct: 105267 ggaaaccaggaacaagcttcca 105288



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>emb|CT025599.16| Mouse DNA sequence from clone RP24-254G12 on chromosome 14, complete
             sequence
          Length = 170436

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 411   gggacaaaatagaaattcaaaa 432
             ||||||||||||||||||||||
Sbjct: 64095 gggacaaaatagaaattcaaaa 64116



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>gb|AC164607.4| Mus musculus chromosome 5, clone RP23-455A10, complete sequence
          Length = 183927

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 38     agaatattacattatgtaatt 58
              |||||||||||||||||||||
Sbjct: 150610 agaatattacattatgtaatt 150630



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>emb|AL445669.9| Human DNA sequence from clone RP11-163G10 on chromosome 1 Contains the
             5' end of the ZMYND12 gene for zinc finger MYND domain
             containing 12, a novel gene, the 5' end of a novel gene, a
             ribosomal protein S3a (RPS3A) pseudogene, a thymosin, beta
             4, X-linked (TMSB4X) pseudogene, a novel pseudogene (DC2)
             and two CpG islands, complete sequence
          Length = 153640

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    gaaaccaggaacaagcttcca 84
             |||||||||||||||||||||
Sbjct: 51788 gaaaccaggaacaagcttcca 51768



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>gb|AC154678.2| Mus musculus BAC clone RP24-302G10 from chromosome 16, complete sequence
          Length = 198982

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 487    gcttaagctttggcactacaa 507
              |||||||||||||||||||||
Sbjct: 144741 gcttaagctttggcactacaa 144761



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>gb|AC133584.12| Mus musculus chromosome 5, clone RP24-448L9, complete sequence
          Length = 165291

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 38     agaatattacattatgtaatt 58
              |||||||||||||||||||||
Sbjct: 147977 agaatattacattatgtaatt 147957



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>ref|XM_414355.1| PREDICTED: Gallus gallus similar to anion exchanger SLC26A6a
            (LOC416012), mRNA
          Length = 2560

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 397  cctggagcttctgtgggaca 416
            ||||||||||||||||||||
Sbjct: 2396 cctggagcttctgtgggaca 2415



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>gb|AC149486.1| Populus trichocarpa clone Pop1-8L22, complete sequence
          Length = 66066

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   caaaatagaaattcaaaaac 434
             ||||||||||||||||||||
Sbjct: 58748 caaaatagaaattcaaaaac 58729



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>gb|AC149543.1| Populus trichocarpa clone Pop1-47M20, complete sequence
          Length = 68256

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   caaaatagaaattcaaaaac 434
             ||||||||||||||||||||
Sbjct: 34431 caaaatagaaattcaaaaac 34412



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>gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, complete sequence
          Length = 207139

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   tgacaaaatcacgttccatg 369
             ||||||||||||||||||||
Sbjct: 21479 tgacaaaatcacgttccatg 21498



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>gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complete sequence
          Length = 152690

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 417   aaatagaaattcaaaaactggaac 440
             ||||||||||| ||||||||||||
Sbjct: 36922 aaatagaaatttaaaaactggaac 36945



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>emb|AL163206.2|HS21C006 Homo sapiens chromosome 21 segment HS21C006
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 68  ccaggaacaagcttccatca 87
           ||||||||||||||||||||
Sbjct: 437 ccaggaacaagcttccatca 418



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>emb|AL135787.13| Human DNA sequence from clone RP11-16L21 on chromosome 9 Contains the 3'
              end of a variant of the gene for  KIAA1962 protein similar
              to zinc finger protein HIT-10, the LTB4DH gene for
              leukotriene B4 12-hydroxydehydrogenase (MGC34943), the gene
              for KIAA0563-related gene (LOC286331), the GNG10 gene for
              guanine nucleotide binding protein (G protein), gamma 10, a
              novel gene, the 3' end of a novel gene and six CpG islands,
              complete sequence
          Length = 161448

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    caacaaaaaagatggacact 162
              ||||||||||||||||||||
Sbjct: 150039 caacaaaaaagatggacact 150058



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>emb|AL121915.8|HSJ1193N1 Human DNA sequence from clone RP5-1193N1 on chromosome 20 Contains the
             LAMR1P1 gene for laminin receptor 1 pseudogene 1, complete
             sequence
          Length = 51859

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 61    gcggaaaccaggaacaagcttcca 84
             |||||||||||| |||||||||||
Sbjct: 16731 gcggaaaccaggcacaagcttcca 16754



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>emb|AL034408.2|HS710L4 Human DNA sequence from clone RP4-710L4 on chromosome Xq11.2-12
             Contains the 5' end of the MTMR8 gene for myotubularin
             related protein 8, a SHC (Src homology 2 domain
             containing) transforming protein 1 (SHC1) pseudogene and a
             CpG island, complete sequence
          Length = 129849

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    aaaccaggaacaagcttcca 84
             ||||||||||||||||||||
Sbjct: 33387 aaaccaggaacaagcttcca 33368



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>gb|AC078906.6| Homo sapiens, clone RP11-142A23, complete sequence
          Length = 156426

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   aaaatagaaattcaaaaact 435
             ||||||||||||||||||||
Sbjct: 69194 aaaatagaaattcaaaaact 69175



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>emb|BX930511.2| Gallus gallus finished cDNA, clone ChEST619h11
          Length = 771

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 cctggagcttctgtgggaca 416
           ||||||||||||||||||||
Sbjct: 589 cctggagcttctgtgggaca 608



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>gb|AC137518.1| Genomic sequence for Arabidopsis thaliana, clone T7I7, from
            chromosome 5, complete sequence
          Length = 22832

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   aatattacattatgtaattc 59
            ||||||||||||||||||||
Sbjct: 2833 aatattacattatgtaattc 2814



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>gb|AF130358.2|AF130358 Homo sapiens chromosome 21q11.2 PAC 90B5, complete sequence
          Length = 197778

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     ccaggaacaagcttccatca 87
              ||||||||||||||||||||
Sbjct: 124485 ccaggaacaagcttccatca 124466



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>dbj|BS000009.1| Pan troglodytes chromosome 22 clone:PTB-118J15, map 22, complete
            sequences
          Length = 199914

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   ccaggaacaagcttccatca 87
            ||||||||||||||||||||
Sbjct: 5171 ccaggaacaagcttccatca 5152



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>ref|XM_309351.2| Anopheles gambiae str. PEST ENSANGP00000015015
           (ENSANGG00000012526), partial mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 catgttgcaaccggccaggt 281
           ||||||||||||||||||||
Sbjct: 420 catgttgcaaccggccaggt 401



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>ref|XM_564195.1| Anopheles gambiae str. PEST ENSANGP00000028864 (ENSANGG00000012526),
            mRNA
          Length = 2980

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  catgttgcaaccggccaggt 281
            ||||||||||||||||||||
Sbjct: 1258 catgttgcaaccggccaggt 1239



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>ref|XM_564194.1| Anopheles gambiae str. PEST ENSANGP00000028392 (ENSANGG00000012526),
            mRNA
          Length = 2954

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  catgttgcaaccggccaggt 281
            ||||||||||||||||||||
Sbjct: 1232 catgttgcaaccggccaggt 1213



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>gb|AC006556.3|AC006556 Homo sapiens, clone hRPK.37_A_1, complete sequence
          Length = 156833

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   ccaggaacaagcttccatca 87
            ||||||||||||||||||||
Sbjct: 2250 ccaggaacaagcttccatca 2269



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>dbj|AP001376.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-775E2, complete
              sequence
          Length = 181300

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    aaaagatggacactagttta 168
              ||||||||||||||||||||
Sbjct: 138179 aaaagatggacactagttta 138198



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>dbj|AP000742.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-82B15, complete
             sequence
          Length = 166543

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   aaaagatggacactagttta 168
             ||||||||||||||||||||
Sbjct: 41537 aaaagatggacactagttta 41556



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>dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, section 4/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     ccaggaacaagcttccatca 87
              ||||||||||||||||||||
Sbjct: 339437 ccaggaacaagcttccatca 339418



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>gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, complete sequence
          Length = 242383

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   tctgtgggacaaaatagaaa 425
             ||||||||||||||||||||
Sbjct: 42188 tctgtgggacaaaatagaaa 42169


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,631,104
Number of Sequences: 3902068
Number of extensions: 4631104
Number of successful extensions: 82037
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81871
Number of HSP's gapped (non-prelim): 166
length of query: 522
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 499
effective length of database: 17,143,297,704
effective search space: 8554505554296
effective search space used: 8554505554296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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