ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags19h16 |
|---|---|
| Clone Library Name | barley_pub |
>MO25N_ARATH (Q9FGK3) Putative MO25-like protein At5g47540| Length = 343 Score = 118 bits (295), Expect(2) = 2e-29 Identities = 58/76 (76%), Positives = 69/76 (90%) Frame = -3 Query: 229 ATYIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFKL 50 + YI +RQAI LLGD+LLDRSNSAVM +YV S+DNL ILMNLLR+SSK+IQIE+FHVFKL Sbjct: 226 SNYITRRQAIKLLGDILLDRSNSAVMTKYVSSRDNLRILMNLLRESSKSIQIEAFHVFKL 285 Query: 49 FAANKNXPAEVVNILV 2 FAAN+N PA++VNILV Sbjct: 286 FAANQNKPADIVNILV 301 Score = 28.9 bits (63), Expect(2) = 2e-29 Identities = 10/14 (71%), Positives = 13/14 (92%) Frame = -2 Query: 293 EFLSKNYDWFFAEF 252 EFL+KN DWFFA++ Sbjct: 205 EFLTKNEDWFFADY 218
>MO25M_ARATH (Q9M0M4) Putative MO25-like protein At4g17270| Length = 343 Score = 112 bits (279), Expect(2) = 3e-27 Identities = 55/74 (74%), Positives = 64/74 (86%) Frame = -3 Query: 223 YIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFKLFA 44 YI +RQAI LLGD+LLDRSNSAVM +YV S DNL ILMNLLR+SSK IQIE+FHVFKLF Sbjct: 228 YITRRQAIKLLGDILLDRSNSAVMTKYVSSMDNLRILMNLLRESSKTIQIEAFHVFKLFV 287 Query: 43 ANKNXPAEVVNILV 2 AN+N P+++ NILV Sbjct: 288 ANQNKPSDIANILV 301 Score = 27.7 bits (60), Expect(2) = 3e-27 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = -2 Query: 293 EFLSKNYDWFFAEF 252 EFL KN DWFFA++ Sbjct: 205 EFLIKNEDWFFADY 218
>MO25L_ARATH (Q9ZQ77) Putative MO25-like protein At2g03410| Length = 348 Score = 103 bits (256), Expect = 1e-22 Identities = 48/77 (62%), Positives = 63/77 (81%) Frame = -3 Query: 232 QATYIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFK 53 + +Y KRQA LLGD+L+DRSNS VM++YV S DNL I+MNLLR+ +KNIQ+E+FH+FK Sbjct: 226 KGSYFTKRQASKLLGDVLMDRSNSGVMVKYVSSLDNLRIMMNLLREPTKNIQLEAFHIFK 285 Query: 52 LFAANKNXPAEVVNILV 2 LF AN+N P ++V ILV Sbjct: 286 LFVANENKPEDIVAILV 302 Score = 31.6 bits (70), Expect = 0.54 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -2 Query: 293 EFLSKNYDWFFAEFXXXXXXXXXLYXKEAGYXAVG 189 E+L+KNY+WFFAE+ + K +G Sbjct: 206 EYLAKNYEWFFAEYNTKLLEKGSYFTKRQASKLLG 240
>CAB39_MOUSE (Q06138) Calcium-binding protein 39 (Protein Mo25)| Length = 341 Score = 91.3 bits (225), Expect(2) = 1e-19 Identities = 39/78 (50%), Positives = 57/78 (73%) Frame = -3 Query: 235 HQATYIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVF 56 H Y+ KRQ++ LLG++LLDR N +M +Y+ +NL ++MNLLRD S+NIQ E+FHVF Sbjct: 219 HSENYVTKRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVF 278 Query: 55 KLFAANKNXPAEVVNILV 2 K+F AN N +++IL+ Sbjct: 279 KVFVANPNKTQPILDILL 296 Score = 23.1 bits (48), Expect(2) = 1e-19 Identities = 8/14 (57%), Positives = 12/14 (85%) Frame = -2 Query: 293 EFLSKNYDWFFAEF 252 EFL ++YD FF+E+ Sbjct: 201 EFLEQHYDRFFSEY 214
>CAB39_HUMAN (Q9Y376) Calcium-binding protein 39 (Protein Mo25)| Length = 341 Score = 91.3 bits (225), Expect(2) = 1e-19 Identities = 39/78 (50%), Positives = 57/78 (73%) Frame = -3 Query: 235 HQATYIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVF 56 H Y+ KRQ++ LLG++LLDR N +M +Y+ +NL ++MNLLRD S+NIQ E+FHVF Sbjct: 219 HSENYVTKRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVF 278 Query: 55 KLFAANKNXPAEVVNILV 2 K+F AN N +++IL+ Sbjct: 279 KVFVANPNKTQPILDILL 296 Score = 23.1 bits (48), Expect(2) = 1e-19 Identities = 8/14 (57%), Positives = 12/14 (85%) Frame = -2 Query: 293 EFLSKNYDWFFAEF 252 EFL ++YD FF+E+ Sbjct: 201 EFLEQHYDRFFSEY 214
>PMO25_SCHPO (Q9P7Q8) Mo25-like protein| Length = 329 Score = 90.1 bits (222), Expect = 1e-18 Identities = 42/73 (57%), Positives = 56/73 (76%) Frame = -3 Query: 223 YIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFKLFA 44 Y+ KRQ++ LLG++LL+R+N +VM RY+ S +NL ++M LLRD SKNIQ E+FHVFKLF Sbjct: 219 YVTKRQSLKLLGEILLNRANRSVMTRYISSAENLKLMMILLRDKSKNIQFEAFHVFKLFV 278 Query: 43 ANKNXPAEVVNIL 5 AN EV+ IL Sbjct: 279 ANPEKSEEVIEIL 291
>MO25_DROME (P91891) Protein Mo25 (dMo25)| Length = 339 Score = 88.6 bits (218), Expect(2) = 1e-18 Identities = 37/74 (50%), Positives = 57/74 (77%) Frame = -3 Query: 223 YIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFKLFA 44 Y+ +RQ++ LLG++LLDR N VM RY+ +NL ++MN+L++ S+NIQ E+FHVFK+F Sbjct: 223 YVTRRQSLKLLGELLLDRHNFTVMTRYISEPENLKLMMNMLKEKSRNIQFEAFHVFKVFV 282 Query: 43 ANKNXPAEVVNILV 2 AN N P +++IL+ Sbjct: 283 ANPNKPKPILDILL 296 Score = 21.9 bits (45), Expect(2) = 1e-18 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -2 Query: 293 EFLSKNYDWFFAE 255 EFL NYD FF++ Sbjct: 200 EFLDANYDKFFSQ 212
>DEE76_CHLPR (Q9XFY6) Degreening-related gene dee76 protein| Length = 321 Score = 88.6 bits (218), Expect = 4e-18 Identities = 40/74 (54%), Positives = 58/74 (78%) Frame = -3 Query: 223 YIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFKLFA 44 Y+ +RQ++ LLG++LLDR N +MM+YV +NL+++MNLL+DSS++IQ E+FHVFK+F Sbjct: 210 YVTRRQSLKLLGELLLDRVNVKIMMQYVSDVNNLILMMNLLKDSSRSIQFEAFHVFKVFV 269 Query: 43 ANKNXPAEVVNILV 2 AN N V +ILV Sbjct: 270 ANPNKTKPVADILV 283
>HYMA_EMENI (O60032) Conidiophore development protein hymA| Length = 384 Score = 84.7 bits (208), Expect(2) = 9e-18 Identities = 41/75 (54%), Positives = 54/75 (72%) Frame = -3 Query: 226 TYIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFKLF 47 +Y+ KRQ+I LLG++LLDR+N +VMMRYV S +NL + M LLRD K +Q E FHVFK+F Sbjct: 248 SYVTKRQSIKLLGEILLDRANYSVMMRYVESGENLKLCMKLLRDDRKMVQYEGFHVFKVF 307 Query: 46 AANKNXPAEVVNILV 2 AN + V IL+ Sbjct: 308 VANPDKSVAVQRILI 322 Score = 23.1 bits (48), Expect(2) = 9e-18 Identities = 7/13 (53%), Positives = 12/13 (92%) Frame = -2 Query: 290 FLSKNYDWFFAEF 252 +L+ N+D+FFA+F Sbjct: 227 YLATNFDYFFAQF 239
>CB39L_HUMAN (Q9H9S4) Calcium-binding protein 39-like (Mo25-like protein)| (Antigen MLAA-34) Length = 337 Score = 85.1 bits (209), Expect = 4e-17 Identities = 37/74 (50%), Positives = 55/74 (74%) Frame = -3 Query: 223 YIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFKLFA 44 Y+ KRQ++ LLG+++LDR N A+M +Y+ +NL ++MNLLRD S NIQ E+FHVFK+F Sbjct: 222 YVTKRQSLKLLGELILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFV 281 Query: 43 ANKNXPAEVVNILV 2 A+ + +V IL+ Sbjct: 282 ASPHKTQPIVEILL 295
>MO25M_CAEEL (O18211) Hypothetical MO25-like protein Y53C12A.4 in chromosome II| Length = 338 Score = 83.6 bits (205), Expect(2) = 4e-17 Identities = 37/73 (50%), Positives = 53/73 (72%) Frame = -3 Query: 223 YIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFKLFA 44 Y+ +RQ++ LLG++LLDR N + M +Y+ S +NL +M LLRD +NIQ E+FHVFK+F Sbjct: 226 YVTRRQSLKLLGELLLDRHNFSTMNKYITSPENLKTVMELLRDKRRNIQYEAFHVFKIFV 285 Query: 43 ANKNXPAEVVNIL 5 AN N P + +IL Sbjct: 286 ANPNKPRPITDIL 298 Score = 21.9 bits (45), Expect(2) = 4e-17 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -2 Query: 293 EFLSKNYDWFFAEF 252 E+L NYD FF ++ Sbjct: 204 EYLDNNYDRFFGQY 217
>CB39L_MOUSE (Q9DB16) Calcium-binding protein 39-like (Mo25-like protein)| Length = 337 Score = 83.6 bits (205), Expect = 1e-16 Identities = 36/74 (48%), Positives = 54/74 (72%) Frame = -3 Query: 223 YIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFKLFA 44 Y+ KRQ++ LLG+++LDR N +M +Y+ +NL ++MNLLRD S NIQ E+FHVFK+F Sbjct: 222 YVTKRQSLKLLGELILDRHNFTIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFV 281 Query: 43 ANKNXPAEVVNILV 2 A+ + +V IL+ Sbjct: 282 ASPHKTQPIVEILL 295
>HYM1_YEAST (P32464) Protein HYM1| Length = 399 Score = 71.6 bits (174), Expect = 5e-13 Identities = 33/75 (44%), Positives = 52/75 (69%) Frame = -3 Query: 226 TYIXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFKLF 47 +Y+ KRQ+ LL +++ RSN+A+M Y+ S +NL ++M L+ D SKN+Q+E+F+VFK+ Sbjct: 243 SYVTKRQSTKLLASLIVIRSNNALMNIYINSPENLKLIMTLMTDKSKNLQLEAFNVFKVM 302 Query: 46 AANKNXPAEVVNILV 2 AN V +ILV Sbjct: 303 VANPRKSKPVFDILV 317
>RPOP_NEUCR (P33540) Probable DNA-directed RNA polymerase (EC 2.7.7.6)| Length = 896 Score = 28.5 bits (62), Expect = 4.6 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%) Frame = -3 Query: 238 YHQATYIXKRQAIXLLG-----DMLLDRSNSAVMMRYVGSKD--NLMILMNLLRDSSKNI 80 Y++ TY+ ++ +L + + A + +V S D N+++L+N +RD + I Sbjct: 732 YNETTYVASKRYKLVLRKADTTSISKQKQIQAFIPNFVHSMDGSNIVLLINTIRDEGRKI 791 Query: 79 QIESFHVFKLFAANKNXPA 23 S H FA + N A Sbjct: 792 NFASIH--DCFATHANDTA 808
>FLGF_BUCAP (Q8K9K5) Flagellar basal-body rod protein flgF| Length = 249 Score = 28.5 bits (62), Expect = 4.6 Identities = 21/72 (29%), Positives = 34/72 (47%) Frame = -3 Query: 220 IXKRQAIXLLGDMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQIESFHVFKLFAA 41 I + + L D L+ + N ++ KDNL N+L DSS IQ E L A+ Sbjct: 156 IGSLKLVRLQNDNLIQKENGLFYLK----KDNLNKYKNILHDSSVRIQSE-----MLEAS 206 Query: 40 NKNXPAEVVNIL 5 N N +++++ Sbjct: 207 NVNPTKNMIDMI 218
>S4A4_AMBTI (O13134) Electrogenic sodium bicarbonate cotransporter 1 (Sodium| bicarbonate cotransporter) (Na(+)/HCO3(-) cotransporter) (Solute carrier family 4 member 4) Length = 1035 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Frame = -3 Query: 187 DMLLDRSNSAVMMRYVGSKDNLMILMNLLRDSSKNIQ--IESF 65 D L +S SA++ Y+G+ N + LL D+++N+Q +ESF Sbjct: 418 DALSIQSLSAILFIYLGTVTNAITFGGLLGDATENMQGVLESF 460 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,980,122 Number of Sequences: 219361 Number of extensions: 499266 Number of successful extensions: 974 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 966 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 974 length of database: 80,573,946 effective HSP length: 73 effective length of database: 64,560,593 effective search space used: 1549454232 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
