ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19h13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189642.1| Oryza sativa (japonica cultivar-group), Ozsa807... 400 e-108
2gb|AY108726.1| Zea mays PCO143835 mRNA sequence 323 4e-85
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
4dbj|AP002836.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
5dbj|AP002816.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
6emb|BX649535.7| Zebrafish DNA sequence from clone DKEY-234E12 in... 42 2.3
7gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 42 2.3
8gb|AF228663.1|AF228663 Euphorbia esula putative flavonol synthas... 42 2.3
9ref|NM_114516.1| Arabidopsis thaliana iron ion binding / isopeni... 40 9.3
10ref|NM_103217.2| Arabidopsis thaliana iron ion binding / isopeni... 40 9.3
11gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome 40 9.3
12gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, comp... 40 9.3
13gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
14gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome 40 9.3
15gb|AE006528.1| Streptococcus pyogenes M1 GAS, section 57 of 167 ... 40 9.3
16gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome 40 9.3
17gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome 40 9.3
18gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome 40 9.3
19gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome 40 9.3
20ref|XM_385297.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 9.3
21gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome 40 9.3
22gb|AY312169.1| Zea mays homeobox transcription factor KNOTTED1 (... 40 9.3
23emb|AL499582.13| Human DNA sequence from clone RP11-371O12 on ch... 40 9.3
24emb|CR380952.1| Candida glabrata strain CBS138 chromosome F comp... 40 9.3
25ref|NM_001011440.1| Xenopus tropicalis pirin (pir), mRNA 40 9.3
26gb|AE010013.1| Streptococcus pyogenes strain MGAS8232, section 6... 40 9.3
27gb|AY260164.1| Zea mays KNOTTED1 (kn1) gene, complete cds 40 9.3
28gb|AF372900.1|AF372900 Arabidopsis thaliana At1g35190/T32G9_27 m... 40 9.3
29dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
30emb|BX816795.1|CNS0ABKD Arabidopsis thaliana Full-length cDNA Co... 40 9.3
31emb|BX818617.1|CNS0AB0K Arabidopsis thaliana Full-length cDNA Co... 40 9.3
32gb|AC010899.8| Homo sapiens BAC clone RP11-543K1 from 2, complet... 40 9.3
33gb|AY089064.1| Arabidopsis thaliana clone 2551 mRNA, complete se... 40 9.3
34gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome 40 9.3
35dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome 40 9.3
36gb|BC088499.1| Xenopus tropicalis pirin, mRNA (cDNA clone MGC:97... 40 9.3
37dbj|AP004907.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 9.3
38gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
39dbj|AP005122.2| Homo sapiens genomic DNA, chromosome 11, clone:R... 40 9.3
40dbj|AP003181.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.3 
>ref|NM_189642.1| Oryza sativa (japonica cultivar-group), Ozsa8070 predicted mRNA
          Length = 915

 Score =  400 bits (202), Expect = e-108
 Identities = 357/410 (87%), Gaps = 9/410 (2%)
 Strand = Plus / Minus

                                                                       
Query: 203 tcagatctgcatgcgtgtccttgtagcgctgggataggtacgccgagcaagtgattgggg 262
           ||||||| |||||||| |||||||| ||||| |||||||| |||||||||||||| || |
Sbjct: 889 tcagatcggcatgcgtatccttgtaccgctgcgataggtatgccgagcaagtgatcggag 830

                                                                       
Query: 263 ggaactttggaggattcgtctcagatttgcaggttggcaggcactcgactacgcagtcgt 322
           |||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 829 ggaactttggaggatttgattcagatttgcaggttggcaggcactcgactacgcaatcgt 770

                                                                       
Query: 323 ggcttggctccacgaaaaaggcaatggaatagcgctctcgtccatccaggaccactcgat 382
           ||||||| ||||| || || ||||| ||||  || ||||||||||| | |||||||||||
Sbjct: 769 ggcttggttccacaaagaacgcaatagaatgacgttctcgtccatctaagaccactcgat 710

                                                                       
Query: 383 gtaaagttgacctgaaaagggagttactccagcgttcgagcatatcaccaagattgacaa 442
           |||| |||||||||||||   |||||||||| |||||||||||||| |||||||||||||
Sbjct: 709 gtaaggttgacctgaaaatacagttactccaccgttcgagcatatcgccaagattgacaa 650

                                                                       
Query: 443 taaagccgcctttaacaggagctacatattcccatacttgaggctgagcattcctgtcct 502
           |||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 649 taaaacctccttttacaggagctacatattcccatacttgaggctgagcattcctgtc-- 592

                                                                       
Query: 503 tgcatatttggagaccaactacatcatcagttgctaagagagtgatcaggccataatccg 562
                  ||||||||||||||||||||| ||||| |  |||||||| ||||||||||| |
Sbjct: 591 -------ttggagaccaactacatcatcggttgccagtagagtgattaggccataatcag 539

                                                             
Query: 563 aatgtgcaccggctccataaactcccttagaaggatttgacacttgacct 612
           |||| ||||| |||||| |||||||||  | ||||||||| |||| ||||
Sbjct: 538 aatgggcacctgctccaaaaactccctctgcaggatttgatactttacct 489
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>gb|AY108726.1| Zea mays PCO143835 mRNA sequence
          Length = 1297

 Score =  323 bits (163), Expect = 4e-85
 Identities = 343/403 (85%)
 Strand = Plus / Minus

                                                                        
Query: 203  tcagatctgcatgcgtgtccttgtagcgctgggataggtacgccgagcaagtgattgggg 262
            ||||||| || || |||||||||||||||||||| |||||||| ||||| ||||| || |
Sbjct: 1092 tcagatccgcgtgagtgtccttgtagcgctgggacaggtacgcggagcaggtgatcggag 1033

                                                                        
Query: 263  ggaactttggaggattcgtctcagatttgcaggttggcaggcactcgactacgcagtcgt 322
            |||||||||||||||| |  || || |||||||| ||||||||||| || ||||||||||
Sbjct: 1032 ggaactttggaggatttgattcggacttgcaggtcggcaggcactccaccacgcagtcgt 973

                                                                        
Query: 323  ggcttggctccacgaaaaaggcaatggaatagcgctctcgtccatccaggaccactcgat 382
            ||||||| ||||||||  |||| || || ||||| ||||| ||||| |||||||||||||
Sbjct: 972  ggcttggttccacgaagtaggctatcgagtagcgttctcgcccatctaggaccactcgat 913

                                                                        
Query: 383  gtaaagttgacctgaaaagggagttactccagcgttcgagcatatcaccaagattgacaa 442
            |||| ||||||||||||| |  ||||||||| | ||||||||| || ||||| ||||| |
Sbjct: 912  gtaaggttgacctgaaaacgccgttactccacctttcgagcatgtcgccaaggttgacga 853

                                                                        
Query: 443  taaagccgcctttaacaggagctacatattcccatacttgaggctgagcattcctgtcct 502
            |||| |||||||| |  |||||||| |||||||| | |||||||||||| ||| ||||||
Sbjct: 852  taaatccgcctttcaacggagctacgtattcccacagttgaggctgagcgttcttgtcct 793

                                                                        
Query: 503  tgcatatttggagaccaactacatcatcagttgctaagagagtgatcaggccataatccg 562
            ||||||||||||| |||||||||||||| ||||| | |||||| |||||||| || || |
Sbjct: 792  tgcatatttggagcccaactacatcatcggttgccaggagagttatcaggccgtagtctg 733

                                                       
Query: 563  aatgtgcaccggctccataaactcccttagaaggatttgacac 605
            |||| || || ||||| ||||| ||||| | ||||| ||||||
Sbjct: 732  aatgggcgcccgctccgtaaacaccctttgcaggatctgacac 690
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Minus

                                                                           
Query: 510     ttggagaccaactacatcatcagttgctaagagagtgatcaggccataatccgaatgtgc 569
               ||||||||||||||||||||| ||||| |  |||||||| ||||||||||| ||||| ||
Sbjct: 4728980 ttggagaccaactacatcatcggttgccagtagagtgattaggccataatcagaatgggc 4728921

                                                                           
Query: 570     accggctccataaactcccttagaaggatttgacacttgacctgatgacaaaaagaacat 629
               ||| |||||| |||||||||  | ||||||||| |||| ||||||||| |||| ||||||
Sbjct: 4728920 acctgctccaaaaactccctctgcaggatttgatactttacctgatgaaaaaaggaacat 4728861

                   
Query: 630     caaa 633
               ||||
Sbjct: 4728860 caaa 4728857



 Score =  109 bits (55), Expect = 1e-20
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                          
Query: 451     cctttaacaggagctacatattcccatacttgaggctgagcattcctgtccttgcatat 509
               ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729130 ccttttacaggagctacatattcccatacttgaggctgagcattcctgtccttgcatat 4729072



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 65/70 (92%)
 Strand = Plus / Minus

                                                                           
Query: 266     actttggaggattcgtctcagatttgcaggttggcaggcactcgactacgcagtcgtggc 325
               ||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4729731 actttggaggatttgattcagatttgcaggttggcaggcactcgactacgcaatcgtggc 4729672

                         
Query: 326     ttggctccac 335
               |||| |||||
Sbjct: 4729671 ttggttccac 4729662



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                           
Query: 203     tcagatctgcatgcgtgtccttgtagcgctgggataggtacgccgagcaagtgattgggg 262
               ||||||| |||||||| |||||||| ||||| |||||||| |||||||||||||| || |
Sbjct: 4729899 tcagatcggcatgcgtatccttgtaccgctgcgataggtatgccgagcaagtgatcggag 4729840

                    
Query: 263     ggaac 267
               |||||
Sbjct: 4729839 ggaac 4729835



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                          
Query: 404     agttactccagcgttcgagcatatcaccaagattgacaataaa 446
               |||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 4729331 agttactccaccgttcgagcatatcgccaagattgacaataaa 4729289



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                     
Query: 358     tctcgtccatccaggaccactcgatgtaaagttgacct 395
               ||||||||||| | ||||||||||||||| ||||||||
Sbjct: 4729511 tctcgtccatctaagaccactcgatgtaaggttgacct 4729474
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>dbj|AP002836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0512G09
          Length = 146921

 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Minus

                                                                         
Query: 510   ttggagaccaactacatcatcagttgctaagagagtgatcaggccataatccgaatgtgc 569
             ||||||||||||||||||||| ||||| |  |||||||| ||||||||||| ||||| ||
Sbjct: 89225 ttggagaccaactacatcatcggttgccagtagagtgattaggccataatcagaatgggc 89166

                                                                         
Query: 570   accggctccataaactcccttagaaggatttgacacttgacctgatgacaaaaagaacat 629
             ||| |||||| |||||||||  | ||||||||| |||| ||||||||| |||| ||||||
Sbjct: 89165 acctgctccaaaaactccctctgcaggatttgatactttacctgatgaaaaaaggaacat 89106

                 
Query: 630   caaa 633
             ||||
Sbjct: 89105 caaa 89102



 Score =  109 bits (55), Expect = 1e-20
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                        
Query: 451   cctttaacaggagctacatattcccatacttgaggctgagcattcctgtccttgcatat 509
             ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89375 ccttttacaggagctacatattcccatacttgaggctgagcattcctgtccttgcatat 89317



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 65/70 (92%)
 Strand = Plus / Minus

                                                                         
Query: 266   actttggaggattcgtctcagatttgcaggttggcaggcactcgactacgcagtcgtggc 325
             ||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 89976 actttggaggatttgattcagatttgcaggttggcaggcactcgactacgcaatcgtggc 89917

                       
Query: 326   ttggctccac 335
             |||| |||||
Sbjct: 89916 ttggttccac 89907



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                         
Query: 203   tcagatctgcatgcgtgtccttgtagcgctgggataggtacgccgagcaagtgattgggg 262
             ||||||| |||||||| |||||||| ||||| |||||||| |||||||||||||| || |
Sbjct: 90144 tcagatcggcatgcgtatccttgtaccgctgcgataggtatgccgagcaagtgatcggag 90085

                  
Query: 263   ggaac 267
             |||||
Sbjct: 90084 ggaac 90080



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                        
Query: 404   agttactccagcgttcgagcatatcaccaagattgacaataaa 446
             |||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 89576 agttactccaccgttcgagcatatcgccaagattgacaataaa 89534



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 358   tctcgtccatccaggaccactcgatgtaaagttgacct 395
             ||||||||||| | ||||||||||||||| ||||||||
Sbjct: 89756 tctcgtccatctaagaccactcgatgtaaggttgacct 89719
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>dbj|AP002816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0695A04
          Length = 158133

 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Minus

                                                                          
Query: 510    ttggagaccaactacatcatcagttgctaagagagtgatcaggccataatccgaatgtgc 569
              ||||||||||||||||||||| ||||| |  |||||||| ||||||||||| ||||| ||
Sbjct: 136196 ttggagaccaactacatcatcggttgccagtagagtgattaggccataatcagaatgggc 136137

                                                                          
Query: 570    accggctccataaactcccttagaaggatttgacacttgacctgatgacaaaaagaacat 629
              ||| |||||| |||||||||  | ||||||||| |||| ||||||||| |||| ||||||
Sbjct: 136136 acctgctccaaaaactccctctgcaggatttgatactttacctgatgaaaaaaggaacat 136077

                  
Query: 630    caaa 633
              ||||
Sbjct: 136076 caaa 136073



 Score =  109 bits (55), Expect = 1e-20
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                         
Query: 451    cctttaacaggagctacatattcccatacttgaggctgagcattcctgtccttgcatat 509
              ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136346 ccttttacaggagctacatattcccatacttgaggctgagcattcctgtccttgcatat 136288



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 65/70 (92%)
 Strand = Plus / Minus

                                                                          
Query: 266    actttggaggattcgtctcagatttgcaggttggcaggcactcgactacgcagtcgtggc 325
              ||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 136947 actttggaggatttgattcagatttgcaggttggcaggcactcgactacgcaatcgtggc 136888

                        
Query: 326    ttggctccac 335
              |||| |||||
Sbjct: 136887 ttggttccac 136878



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                          
Query: 203    tcagatctgcatgcgtgtccttgtagcgctgggataggtacgccgagcaagtgattgggg 262
              ||||||| |||||||| |||||||| ||||| |||||||| |||||||||||||| || |
Sbjct: 137115 tcagatcggcatgcgtatccttgtaccgctgcgataggtatgccgagcaagtgatcggag 137056

                   
Query: 263    ggaac 267
              |||||
Sbjct: 137055 ggaac 137051



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                         
Query: 404    agttactccagcgttcgagcatatcaccaagattgacaataaa 446
              |||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 136547 agttactccaccgttcgagcatatcgccaagattgacaataaa 136505



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 358    tctcgtccatccaggaccactcgatgtaaagttgacct 395
              ||||||||||| | ||||||||||||||| ||||||||
Sbjct: 136727 tctcgtccatctaagaccactcgatgtaaggttgacct 136690
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>emb|BX649535.7| Zebrafish DNA sequence from clone DKEY-234E12 in linkage group 3,
             complete sequence
          Length = 151079

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 633   atggaagaattcatcatgatt 653
             |||||||||||||||||||||
Sbjct: 49999 atggaagaattcatcatgatt 49979
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>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 33      ttacactgatattagcacatt 53
               |||||||||||||||||||||
Sbjct: 1433656 ttacactgatattagcacatt 1433636
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>gb|AF228663.1|AF228663 Euphorbia esula putative flavonol synthase-like protein mRNA,
           complete cds
          Length = 1188

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 372 gaccactcgatgtaaagttga 392
           |||||||||||||||||||||
Sbjct: 845 gaccactcgatgtaaagttga 825
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>ref|NM_114516.1| Arabidopsis thaliana iron ion binding / isopenicillin-N synthase/
           oxidoreductase, acting on paired donors, with
           incorporation or reduction of molecu> AT3G46490 mRNA,
           complete cds
          Length = 921

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 406 ttactccagcgttcgagcatatcaccaagattgacaataaagccgcctttaa 457
           |||||||| || || |||| |||||||||||| |||||| || | |||||||
Sbjct: 779 ttactccaacgctcaagcagatcaccaagattcacaatataggctcctttaa 728
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>ref|NM_103217.2| Arabidopsis thaliana iron ion binding / isopenicillin-N synthase/
           oxidoreductase, acting on paired donors, with
           incorporation or reduction of molecu> AT1G35190 mRNA,
           complete cds
          Length = 1339

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 409 ctccagcgttcgagcatatcaccaagattgacaataaagccgcctttaacaggagctaca 468
           ||||| ||||| |||||||| |||||||| || |||||  | |||||||  || | ||||
Sbjct: 868 ctccaacgttccagcatatcgccaagattcactataaatgctcctttaatcggcggtaca 809

                   
Query: 469 tattccca 476
           ||||||||
Sbjct: 808 tattccca 801
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>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    tgacaaaaagaacatcaaat 634
              ||||||||||||||||||||
Sbjct: 589669 tgacaaaaagaacatcaaat 589650
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>gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, complete sequence
          Length = 235709

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 631   aaatggaagaattcatcatg 650
             ||||||||||||||||||||
Sbjct: 52457 aaatggaagaattcatcatg 52476
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>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10,
             complete sequence
          Length = 140282

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 639   gaattcatcatgattcatgc 658
             ||||||||||||||||||||
Sbjct: 20487 gaattcatcatgattcatgc 20468
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>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
          Length = 1899877

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    tgacaaaaagaacatcaaat 634
              ||||||||||||||||||||
Sbjct: 605875 tgacaaaaagaacatcaaat 605856
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>gb|AE006528.1| Streptococcus pyogenes M1 GAS, section 57 of 167 of the complete
            genome
          Length = 10283

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 615  tgacaaaaagaacatcaaat 634
            ||||||||||||||||||||
Sbjct: 7503 tgacaaaaagaacatcaaat 7484
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>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    tgacaaaaagaacatcaaat 634
              ||||||||||||||||||||
Sbjct: 648628 tgacaaaaagaacatcaaat 648609
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>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    tgacaaaaagaacatcaaat 634
              ||||||||||||||||||||
Sbjct: 628631 tgacaaaaagaacatcaaat 628612
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>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
          Length = 1928252

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    tgacaaaaagaacatcaaat 634
              ||||||||||||||||||||
Sbjct: 620651 tgacaaaaagaacatcaaat 620632
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>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
          Length = 1836467

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    tgacaaaaagaacatcaaat 634
              ||||||||||||||||||||
Sbjct: 627223 tgacaaaaagaacatcaaat 627204
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>ref|XM_385297.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05121.1)
            partial mRNA
          Length = 2016

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 410  tccagcgttcgagcatatca 429
            ||||||||||||||||||||
Sbjct: 1143 tccagcgttcgagcatatca 1162
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>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    tgacaaaaagaacatcaaat 634
              ||||||||||||||||||||
Sbjct: 587827 tgacaaaaagaacatcaaat 587808
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>gb|AY312169.1| Zea mays homeobox transcription factor KNOTTED1 (kn1) gene, complete
            cds
          Length = 22402

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 626  acatcaaatggaagaattca 645
            ||||||||||||||||||||
Sbjct: 7232 acatcaaatggaagaattca 7213
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>emb|AL499582.13| Human DNA sequence from clone RP11-371O12 on chromosome 10 Contains the
             5' end of the gene for double-stranded RNA specific
             adenosine deaminase (ADAR3) and a CpG island, complete
             sequence
          Length = 181532

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   tttaacaggagctacatatt 472
             ||||||||||||||||||||
Sbjct: 75756 tttaacaggagctacatatt 75775
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>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence
          Length = 927101

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 619    aaaaagaacatcaaatggaa 638
              ||||||||||||||||||||
Sbjct: 404192 aaaaagaacatcaaatggaa 404173
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>ref|NM_001011440.1| Xenopus tropicalis pirin (pir), mRNA
          Length = 2319

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 ggctgagcattcctgtcctt 503
           ||||||||||||||||||||
Sbjct: 902 ggctgagcattcctgtcctt 921
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>gb|AE010013.1| Streptococcus pyogenes strain MGAS8232, section 61 of 173 of the
            complete genome
          Length = 10607

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 615  tgacaaaaagaacatcaaat 634
            ||||||||||||||||||||
Sbjct: 7828 tgacaaaaagaacatcaaat 7809
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>gb|AY260164.1| Zea mays KNOTTED1 (kn1) gene, complete cds
          Length = 9369

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 626  acatcaaatggaagaattca 645
            ||||||||||||||||||||
Sbjct: 4650 acatcaaatggaagaattca 4631
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>gb|AF372900.1|AF372900 Arabidopsis thaliana At1g35190/T32G9_27 mRNA, complete cds
          Length = 1259

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 409 ctccagcgttcgagcatatcaccaagattgacaataaagccgcctttaacaggagctaca 468
           ||||| ||||| |||||||| |||||||| || |||||  | |||||||  || | ||||
Sbjct: 810 ctccaacgttccagcatatcgccaagattcactataaatgctcctttaatcggcggtaca 751

                   
Query: 469 tattccca 476
           ||||||||
Sbjct: 750 tattccca 743
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 639    gaattcatcatgattcatgc 658
              ||||||||||||||||||||
Sbjct: 748045 gaattcatcatgattcatgc 748026
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>emb|BX816795.1|CNS0ABKD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH69ZC01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1274

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 409 ctccagcgttcgagcatatcaccaagattgacaataaagccgcctttaacaggagctaca 468
           ||||| ||||| |||||||| |||||||| || |||||  | |||||||  || | ||||
Sbjct: 869 ctccaacgttccagcatatcgccaagattcactataaatgctcctttaatcggcggtaca 810

                   
Query: 469 tattccca 476
           ||||||||
Sbjct: 809 tattccca 802
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>emb|BX818617.1|CNS0AB0K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL88ZD05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 752

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 409 ctccagcgttcgagcatatcaccaagattgacaataaagccgcctttaacaggagctaca 468
           ||||| ||||| |||||||| |||||||| || |||||  | |||||||  || | ||||
Sbjct: 281 ctccaacgttccagcatatcgccaagattcactataaatgctcctttaatcggcggtaca 222

                   
Query: 469 tattccca 476
           ||||||||
Sbjct: 221 tattccca 214
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>gb|AC010899.8| Homo sapiens BAC clone RP11-543K1 from 2, complete sequence
          Length = 210232

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    ttggggggaactttggagga 276
              ||||||||||||||||||||
Sbjct: 153000 ttggggggaactttggagga 153019
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>gb|AY089064.1| Arabidopsis thaliana clone 2551 mRNA, complete sequence
          Length = 1323

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 409 ctccagcgttcgagcatatcaccaagattgacaataaagccgcctttaacaggagctaca 468
           ||||| ||||| |||||||| |||||||| || |||||  | |||||||  || | ||||
Sbjct: 855 ctccaacgttccagcatatcgccaagattcactataaatgctcctttaatcggcggtaca 796

                   
Query: 469 tattccca 476
           ||||||||
Sbjct: 795 tattccca 788
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>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
          Length = 1900521

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    tgacaaaaagaacatcaaat 634
              ||||||||||||||||||||
Sbjct: 559861 tgacaaaaagaacatcaaat 559842
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>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 615     tgacaaaaagaacatcaaat 634
               ||||||||||||||||||||
Sbjct: 1336873 tgacaaaaagaacatcaaat 1336892
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>gb|BC088499.1| Xenopus tropicalis pirin, mRNA (cDNA clone MGC:97566
           IMAGE:6976640), complete cds
          Length = 2319

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 ggctgagcattcctgtcctt 503
           ||||||||||||||||||||
Sbjct: 902 ggctgagcattcctgtcctt 921
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>dbj|AP004907.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11D15, TM0065,
             complete sequence
          Length = 115046

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 286   gatttgcaggttggcaggcactcgacta 313
             |||||||||||||||| |||||| ||||
Sbjct: 53584 gatttgcaggttggcaagcactccacta 53557
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>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0041A22, complete sequence
          Length = 117919

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 639   gaattcatcatgattcatgc 658
             ||||||||||||||||||||
Sbjct: 93226 gaattcatcatgattcatgc 93207
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>dbj|AP005122.2| Homo sapiens genomic DNA, chromosome 11, clone:RP11-419F8, complete
              sequence
          Length = 170006

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 574    gctccataaactcccttagaagga 597
              |||||||||| |||||||||||||
Sbjct: 126912 gctccataaaatcccttagaagga 126889
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>dbj|AP003181.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-94P11, complete
             sequence
          Length = 165611

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 256   attggggggaactttggaggattc 279
             ||||| ||||||||||||||||||
Sbjct: 38431 attggtgggaactttggaggattc 38454


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,317,541
Number of Sequences: 3902068
Number of extensions: 5317541
Number of successful extensions: 92854
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92573
Number of HSP's gapped (non-prelim): 281
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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