| Clone Name | rbags19h08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | S35B4_DROME (Q9W429) UDP-xylose and UDP-N-acetylglucosamine tran... | 32 | 0.88 | 2 | Y420_BUCAP (Q8K9C6) Hypothetical protein BUsg420 | 29 | 7.5 | 3 | YR187_MIMIV (Q5URB3) Hypothetical protein R187 | 28 | 9.7 |
|---|
>S35B4_DROME (Q9W429) UDP-xylose and UDP-N-acetylglucosamine transporter-like| Length = 352 Score = 32.0 bits (71), Expect = 0.88 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%) Frame = -2 Query: 340 HFCSSAYQLM*DMCCGVNLIKRERKWRKQSIVEIQC*----CVXLRWGETKSXTFHSSNL 173 H + LM +M G+ L+K+ R+ S V + C + G+ K T HS + Sbjct: 97 HMIFRSGSLMANMIMGIVLLKKRYNLRQYSSVAMITAGIILCTLVSSGDVKDNTHHSLKV 156 Query: 172 PLTLSTIKWWT 140 + S WWT Sbjct: 157 DTSYSDFFWWT 167
>Y420_BUCAP (Q8K9C6) Hypothetical protein BUsg420| Length = 319 Score = 28.9 bits (63), Expect = 7.5 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = -2 Query: 202 KSXTFHSSNLPLTLSTIKWWTSINVTRKDGK-----IFVTNLSCL-YVSHRLC 62 K+ + S NLPLTLS ++ W I + D K F +++CL ++LC Sbjct: 8 KNSIYPSINLPLTLSLLEEWCLIYICGIDSKKHLQNQFTIDINCLKKEEYKLC 60
>YR187_MIMIV (Q5URB3) Hypothetical protein R187| Length = 246 Score = 28.5 bits (62), Expect = 9.7 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 140 KYKCHS*RWEDFCNEFILPVCQPSF 66 KYKCH +E F +FI+P + F Sbjct: 196 KYKCHPSDYEKFVRQFIIPKLKKQF 220 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,565,243 Number of Sequences: 219361 Number of extensions: 1110336 Number of successful extensions: 2526 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2483 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2526 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)