| Clone Name | rbags19h04 |
|---|---|
| Clone Library Name | barley_pub |
>DR206_PEA (P13240) Disease resistance response protein 206| Length = 184 Score = 68.2 bits (165), Expect = 1e-11 Identities = 38/116 (32%), Positives = 65/116 (56%) Frame = -3 Query: 475 FGAVVAIDDPLTTSPAVTGSAKSKDEVGRAQGTYTFADQATFGLLMNMNFVFTAGEYKGS 296 FG ++ DDP+T S ++ S +VGRAQG Y + + T+ ++ FV + ++G Sbjct: 73 FGNIIVFDDPITLSHSL-----SSKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQG- 126 Query: 295 SLTIYGRNEVLSAVREMSILGGTGKFRMARGYVQASTVDSGANSGETVVEYTVYVK 128 ++T G + +++ R++S+ GGTG F M RG +T+ + A GE VY+K Sbjct: 127 TITFAGADPIVAKTRDISVTGGTGDFFMHRG---IATITTDAFEGEAYFRLGVYIK 179
>S10A9_RABIT (P50117) Protein S100-A9 (S100 calcium-binding protein A9)| (Calgranulin-B) (Migration inhibitory factor-related protein 14) (MRP-14) (Fragment) Length = 118 Score = 34.7 bits (78), Expect = 0.16 Identities = 17/44 (38%), Positives = 19/44 (43%) Frame = -2 Query: 356 HLRAPHEHELRVHRRGVQGQQPDHLRPQRGAFGGEGDEHPRGHG 225 H APH+HE H G+ G P H G G H GHG Sbjct: 81 HKNAPHDHEGHSHGPGLGGSGPGH---------GHGHSHGHGHG 115
>GALR3_MOUSE (O88853) Galanin receptor type 3 (GAL3-R) (GALR3)| Length = 370 Score = 34.3 bits (77), Expect = 0.21 Identities = 23/57 (40%), Positives = 26/57 (45%) Frame = -2 Query: 359 GHLRAPHEHELRVHRRGVQGQQPDHLRPQRGAFGGEGDEHPRGHGQVPHGSRLRPGE 189 GH R H H R+HR ++ QP G G GD PRG P G LR GE Sbjct: 309 GHRRHRHHHH-RLHR-ALRRVQP----ASSGPAGYPGDARPRGWSMEPRGDALRGGE 359
>Y4XP_RHISN (P55708) Putative cysteine synthase (EC 2.5.1.47) (O-acetylserine| sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase) Length = 336 Score = 32.0 bits (71), Expect = 1.0 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = -3 Query: 313 GEYKGSSLTIYGRNEVLSAVREMSILGGTGKFRMARGYVQASTVDSGANSGETVVE 146 G+ S+ + GRN L E + GG+ K RMAR V A+ D G T+VE Sbjct: 11 GQTPVMSIDVPGRNATLVLKIEKNNPGGSMKDRMARSMVIAALQDGRLPPGGTIVE 66
>K0196_HUMAN (Q12768) Protein KIAA0196| Length = 1159 Score = 31.6 bits (70), Expect = 1.4 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = +3 Query: 306 YSPAVNTKFMFMRSPKVAWSANV*VPCARPTSSLDLADPVTAGLV 440 Y P VN F+ + PK+ ++ N+ + C +PT +D P+ GL+ Sbjct: 1038 YFPIVNFLFLIAQLPKLQYNKNLGMVCRKPTDPVDW-PPLVLGLL 1081
>GALR3_RAT (O88626) Galanin receptor type 3 (GAL3-R) (GALR3)| Length = 370 Score = 31.2 bits (69), Expect = 1.8 Identities = 20/53 (37%), Positives = 22/53 (41%) Frame = -2 Query: 350 RAPHEHELRVHRRGVQGQQPDHLRPQRGAFGGEGDEHPRGHGQVPHGSRLRPG 192 R H H R HR ++ QP G G GD PRG P G LR G Sbjct: 310 RRRHRHHHRAHR-ALRRVQP----ASSGPAGYPGDARPRGWSMEPRGDALRGG 357
>CENB1_HUMAN (Q15027) Centaurin-beta 1 (Cnt-b1)| Length = 740 Score = 30.8 bits (68), Expect = 2.3 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = -2 Query: 371 VRRPGHLRAPHEHELRVHRRGVQGQQPDHLRPQRGAFGGEGDEHPRGHGQVPHGSRLRP 195 V++PG + E E +H + V+ + L RG GG G PRG VP +RP Sbjct: 494 VKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRG--RPRGQPPVPPKPSIRP 550
>K0196_MOUSE (Q8C2E7) Protein KIAA0196| Length = 1159 Score = 29.6 bits (65), Expect = 5.2 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = +3 Query: 306 YSPAVNTKFMFMRSPKVAWSANV*VPCARPTSSLDLADPVTAGLV 440 Y P VN F+ + PK+ ++ N+ + C +P +D P+ GL+ Sbjct: 1038 YFPIVNFLFLIAQLPKLQYNKNLGMVCRKPADPVDW-PPLVLGLL 1081
>YHEB_CHLVI (P56160) Hypothetical 28.2 kDa protein in hemB 3'region| Length = 261 Score = 29.6 bits (65), Expect = 5.2 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -2 Query: 317 RRGVQGQQPDHLRPQRGAFGGEGDEHPRGHGQ 222 R+G+ + PD G FG E DEHP G+G+ Sbjct: 53 RQGISAKFPDD-----GLFGEEFDEHPSGNGR 79
>DEOC_HALMA (Q5UX95) Probable deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 231 Score = 28.9 bits (63), Expect = 8.9 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -3 Query: 271 EVLSAVREMSILGGTGKFRMARGYVQASTVDSGANSGETVV 149 E+LS + GG G + A+ +A GA+SG+T+V Sbjct: 163 EILSKYLPVKASGGVGSWADAKAMFEAGAERIGASSGDTIV 203
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 28.9 bits (63), Expect = 8.9 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = -2 Query: 311 GVQGQQ-PDHLRPQRGAFGGEGDEHPRGHGQVP--HGSRLRPG 192 G+ G+Q P L+ +G G GD+ P+G VP G R PG Sbjct: 2102 GLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPG 2144
>GCS1_CAEEL (Q19426) Probable mannosyl-oligosaccharide glucosidase (EC| 3.2.1.106) (Processing A-glucosidase I) Length = 781 Score = 28.9 bits (63), Expect = 8.9 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 231 PPRMLISLTAESTSLRP*MVRLLPLYSPAVNTKFMFMRSPKVAWS 365 P L+S +L P M++L+P SP + + +R PK+ W+ Sbjct: 622 PSYTLVSDAFGYNNLFPMMLKLIPSKSPILKSMLDKIRDPKILWT 666 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,386,151 Number of Sequences: 219361 Number of extensions: 963824 Number of successful extensions: 3477 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3367 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3473 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)