| Clone Name | rbags19g24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK100247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058E10, full insert sequence Length = 2265 Score = 283 bits (143), Expect = 3e-73 Identities = 269/311 (86%) Strand = Plus / Minus Query: 247 tcttcgtatgctgcgtcatgcacaccgagagcagcacggccagacgggtcgaggagcttg 306 ||||| ||||| || ||||| ||||| ||||||||||| ||||| || || ||| ||| Sbjct: 1789 tcttcatatgcagcatcatgaacaccaagagcagcacgaccagatggatcaaggtttttg 1730 Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 |||||||| |||||||||||||||||||| || |||||||| || ||||| |||||||| Sbjct: 1729 gaccaggctgcgtcccattcaacagctttagcagtgctgcacgcgacgctaggacctcca 1670 Query: 367 ggcaccgtcagcctagcagcattcttgggataaaacttctcaaatactgtcctataatag 426 || || |||| ||||||||||||||||||| | || ||||| |||| ||||||||||||| Sbjct: 1669 ggtactgtcaacctagcagcattcttgggaaagaatttctcgaatattgtcctataatag 1610 Query: 427 taggcttcttttgttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatg 486 || ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| Sbjct: 1609 tacgcttcttttgtaactggagtgttttctgggtaaacaaagctagcgttcatcatcatg 1550 Query: 487 gaatctgacacatgtgcattagcatggtccttcaatccatcaatccaactgtacccaaca 546 |||||||| |||||| |||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 1549 gaatctgatacatgttcatttgcatgatccttcaatccatcaatccaactgtacccaaca 1490 Query: 547 ccatcgctgaa 557 ||||| ||||| Sbjct: 1489 ccatcactgaa 1479
>gb|U55873.1|OSU55873 Oryza sativa asparagine synthetase mRNA, complete cds Length = 2172 Score = 283 bits (143), Expect = 3e-73 Identities = 269/311 (86%) Strand = Plus / Minus Query: 247 tcttcgtatgctgcgtcatgcacaccgagagcagcacggccagacgggtcgaggagcttg 306 ||||| ||||| || ||||| ||||| ||||||||||| ||||| || || ||| ||| Sbjct: 1800 tcttcatatgcagcatcatgaacaccaagagcagcacgaccagatggatcaaggtttttg 1741 Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 |||||||| |||||||||||||||||||| || |||||||| || ||||| |||||||| Sbjct: 1740 gaccaggctgcgtcccattcaacagctttagcagtgctgcacgcgacgctaggacctcca 1681 Query: 367 ggcaccgtcagcctagcagcattcttgggataaaacttctcaaatactgtcctataatag 426 || || |||| ||||||||||||||||||| | || ||||| |||| ||||||||||||| Sbjct: 1680 ggtactgtcaacctagcagcattcttgggaaagaatttctcgaatattgtcctataatag 1621 Query: 427 taggcttcttttgttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatg 486 || ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| Sbjct: 1620 tacgcttcttttgtaactggagtgttttctgggtaaacaaagctagcgttcatcatcatg 1561 Query: 487 gaatctgacacatgtgcattagcatggtccttcaatccatcaatccaactgtacccaaca 546 |||||||| |||||| |||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 1560 gaatctgatacatgttcatttgcatgatccttcaatccatcaatccaactgtacccaaca 1501 Query: 547 ccatcgctgaa 557 ||||| ||||| Sbjct: 1500 ccatcactgaa 1490
>dbj|D83378.1|RICAS Oryza sativa (japonica cultivar-group) mRNA for asparagine synthetase, complete cds Length = 2141 Score = 283 bits (143), Expect = 3e-73 Identities = 269/311 (86%) Strand = Plus / Minus Query: 247 tcttcgtatgctgcgtcatgcacaccgagagcagcacggccagacgggtcgaggagcttg 306 ||||| ||||| || ||||| ||||| ||||||||||| ||||| || || ||| ||| Sbjct: 1800 tcttcatatgcagcatcatgaacaccaagagcagcacgaccagatggatcaaggtttttg 1741 Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 |||||||| |||||||||||||||||||| || |||||||| || ||||| |||||||| Sbjct: 1740 gaccaggctgcgtcccattcaacagctttagcagtgctgcacgcgacgctaggacctcca 1681 Query: 367 ggcaccgtcagcctagcagcattcttgggataaaacttctcaaatactgtcctataatag 426 || || |||| ||||||||||||||||||| | || ||||| |||| ||||||||||||| Sbjct: 1680 ggtactgtcaacctagcagcattcttgggaaagaatttctcgaatattgtcctataatag 1621 Query: 427 taggcttcttttgttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatg 486 || ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| Sbjct: 1620 tacgcttcttttgtaactggagtgttttctgggtaaacaaagctagcgttcatcatcatg 1561 Query: 487 gaatctgacacatgtgcattagcatggtccttcaatccatcaatccaactgtacccaaca 546 |||||||| |||||| |||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 1560 gaatctgatacatgttcatttgcatgatccttcaatccatcaatccaactgtacccaaca 1501 Query: 547 ccatcgctgaa 557 ||||| ||||| Sbjct: 1500 ccatcactgaa 1490
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 113 bits (57), Expect = 6e-22 Identities = 123/145 (84%) Strand = Plus / Plus Query: 247 tcttcgtatgctgcgtcatgcacaccgagagcagcacggccagacgggtcgaggagcttg 306 ||||| ||||| || ||||| ||||| ||||||||||| ||||| || || ||| ||| Sbjct: 8770229 tcttcatatgcagcatcatgaacaccaagagcagcacgaccagatggatcaaggtttttg 8770288 Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 |||||||| |||||||||||||||||||| || |||||||| || ||||| |||||||| Sbjct: 8770289 gaccaggctgcgtcccattcaacagctttagcagtgctgcacgcgacgctaggacctcca 8770348 Query: 367 ggcaccgtcagcctagcagcattct 391 || || |||| |||||||||||||| Sbjct: 8770349 ggtactgtcaacctagcagcattct 8770373 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 496 acatgtgcattagcatggtccttcaatccatcaatccaactgtacccaacaccatcgctg 555 |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 8770682 acatgttcatttgcatgatccttcaatccatcaatccaactgtacccaacaccatcactg 8770741 Query: 556 aa 557 || Sbjct: 8770742 aa 8770743 Score = 89.7 bits (45), Expect = 9e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 390 cttgggataaaacttctcaaatactgtcctataatagtaggcttcttttgttgtgggtgt 449 ||||||| | || ||||| |||| ||||||||||||||| ||||||||||| || || Sbjct: 8770454 cttgggaaagaatttctcgaatattgtcctataatagtacgcttcttttgtaactggagt 8770513 Query: 450 gttttcagggtaaacaaagctggcgtttgtcatcatggaatctga 494 |||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 8770514 gttttctgggtaaacaaagctagcgttcatcatcatggaatctga 8770558
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 113 bits (57), Expect = 6e-22 Identities = 123/145 (84%) Strand = Plus / Plus Query: 247 tcttcgtatgctgcgtcatgcacaccgagagcagcacggccagacgggtcgaggagcttg 306 ||||| ||||| || ||||| ||||| ||||||||||| ||||| || || ||| ||| Sbjct: 40550 tcttcatatgcagcatcatgaacaccaagagcagcacgaccagatggatcaaggtttttg 40609 Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 |||||||| |||||||||||||||||||| || |||||||| || ||||| |||||||| Sbjct: 40610 gaccaggctgcgtcccattcaacagctttagcagtgctgcacgcgacgctaggacctcca 40669 Query: 367 ggcaccgtcagcctagcagcattct 391 || || |||| |||||||||||||| Sbjct: 40670 ggtactgtcaacctagcagcattct 40694 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 496 acatgtgcattagcatggtccttcaatccatcaatccaactgtacccaacaccatcgctg 555 |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 41003 acatgttcatttgcatgatccttcaatccatcaatccaactgtacccaacaccatcactg 41062 Query: 556 aa 557 || Sbjct: 41063 aa 41064 Score = 89.7 bits (45), Expect = 9e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 390 cttgggataaaacttctcaaatactgtcctataatagtaggcttcttttgttgtgggtgt 449 ||||||| | || ||||| |||| ||||||||||||||| ||||||||||| || || Sbjct: 40775 cttgggaaagaatttctcgaatattgtcctataatagtacgcttcttttgtaactggagt 40834 Query: 450 gttttcagggtaaacaaagctggcgtttgtcatcatggaatctga 494 |||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 40835 gttttctgggtaaacaaagctagcgttcatcatcatggaatctga 40879
>ref|NM_180941.1| Arabidopsis thaliana ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) AT5G65010 (ASN2) transcript variant AT5G65010.1 mRNA, complete cds Length = 2068 Score = 67.9 bits (34), Expect = 3e-08 Identities = 193/246 (78%) Strand = Plus / Minus Query: 319 tcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcctggcaccgtcagc 378 |||||||| |||||||||||||| ||||| || | || ||||||||||| || ||| Sbjct: 1629 tcccattctacagctttcgcggtactgcaagctatacttggacctcctggtacagtcgct 1570 Query: 379 ctagcagcattcttgggataaaacttctcaaatactgtcctataatagtaggcttctttt 438 ||||||||| |||| || | |||||||| || | || || || ||||| ||||||||| Sbjct: 1569 ctagcagcactcttcgggaagaacttctcgaagatggttctgtagtagtacgcttctttt 1510 Query: 439 gttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatggaatctgacaca 498 || |||||||| || ||| | |||||||| ||||||| || ||| | ||| || ||| Sbjct: 1509 gtcagaggtgtgttatccgggaagacaaagcttgcgtttgacagcatagtatcagagaca 1450 Query: 499 tgtgcattagcatggtccttcaatccatcaatccaactgtacccaacaccatcgctgaac 558 ||| ||| ||||| || |||| ||||| ||||| || |||||||| ||||| || ||| Sbjct: 1449 tgtttatttgcatgatctttcagaccatctatccagctatacccaactccatcactaaac 1390 Query: 559 tgttct 564 |||||| Sbjct: 1389 tgttct 1384
>gb|BT013473.1| Lycopersicon esculentum clone 132134R, mRNA sequence Length = 1923 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 514 tccttcaatccatcaatccaactgtacccaacaccatcgctgaactgttc 563 |||||||| ||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1466 tccttcaagccatcaatccaactgtagccaactccatcactgaactgttc 1417 Score = 44.1 bits (22), Expect = 0.49 Identities = 70/86 (81%) Strand = Plus / Minus Query: 262 tcatgcacaccgagagcagcacggccagacgggtcgaggagcttggaccaggcggcgtcc 321 ||||| |||||||||||||| || || || || || || ||||||||| ||||| ||| Sbjct: 1718 tcatgaacaccgagagcagctcgaccggatggatctagattcttggaccaagcggcatcc 1659 Query: 322 cattcaacagctttcgcggtgctgca 347 ||||| || ||||| || |||||||| Sbjct: 1658 cattctactgcttttgcagtgctgca 1633 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 418 ctataatagtaggcttcttttgttgtgggtgtgttttcagggtaaacaaa 467 ||||| ||||| |||| || |||||||||||||| | |||||||||||| Sbjct: 1562 ctatagtagtacccttccttggttgtgggtgtgttatgagggtaaacaaa 1513
>gb|AY124866.1| Arabidopsis thaliana AT5g65010/MXK3_25 mRNA, complete cds Length = 1737 Score = 67.9 bits (34), Expect = 3e-08 Identities = 193/246 (78%) Strand = Plus / Minus Query: 319 tcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcctggcaccgtcagc 378 |||||||| |||||||||||||| ||||| || | || ||||||||||| || ||| Sbjct: 1595 tcccattctacagctttcgcggtactgcaagctatacttggacctcctggtacagtcgct 1536 Query: 379 ctagcagcattcttgggataaaacttctcaaatactgtcctataatagtaggcttctttt 438 ||||||||| |||| || | |||||||| || | || || || ||||| ||||||||| Sbjct: 1535 ctagcagcactcttcgggaagaacttctcgaagatggttctgtagtagtacgcttctttt 1476 Query: 439 gttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatggaatctgacaca 498 || |||||||| || ||| | |||||||| ||||||| || ||| | ||| || ||| Sbjct: 1475 gtcagaggtgtgttatccgggaagacaaagcttgcgtttgacagcatagtatcagagaca 1416 Query: 499 tgtgcattagcatggtccttcaatccatcaatccaactgtacccaacaccatcgctgaac 558 ||| ||| ||||| || |||| ||||| ||||| || |||||||| ||||| || ||| Sbjct: 1415 tgtttatttgcatgatctttcagaccatctatccagctatacccaactccatcactaaac 1356 Query: 559 tgttct 564 |||||| Sbjct: 1355 tgttct 1350
>gb|AF367340.1| Arabidopsis thaliana AT5g65010/MXK3_25 mRNA, complete cds Length = 2028 Score = 67.9 bits (34), Expect = 3e-08 Identities = 193/246 (78%) Strand = Plus / Minus Query: 319 tcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcctggcaccgtcagc 378 |||||||| |||||||||||||| ||||| || | || ||||||||||| || ||| Sbjct: 1628 tcccattctacagctttcgcggtactgcaagctatacttggacctcctggtacagtcgct 1569 Query: 379 ctagcagcattcttgggataaaacttctcaaatactgtcctataatagtaggcttctttt 438 ||||||||| |||| || | |||||||| || | || || || ||||| ||||||||| Sbjct: 1568 ctagcagcactcttcgggaagaacttctcgaagatggttctgtagtagtacgcttctttt 1509 Query: 439 gttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatggaatctgacaca 498 || |||||||| || ||| | |||||||| ||||||| || ||| | ||| || ||| Sbjct: 1508 gtcagaggtgtgttatccgggaagacaaagcttgcgtttgacagcatagtatcagagaca 1449 Query: 499 tgtgcattagcatggtccttcaatccatcaatccaactgtacccaacaccatcgctgaac 558 ||| ||| ||||| || |||| ||||| ||||| || |||||||| ||||| || ||| Sbjct: 1448 tgtttatttgcatgatctttcagaccatctatccagctatacccaactccatcactaaac 1389 Query: 559 tgttct 564 |||||| Sbjct: 1388 tgttct 1383
>gb|AF190729.1| Helianthus annuus asparagine synthetase (HAS2) mRNA, complete cds Length = 1850 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 340 gtgctgcatgcaacgctgggacctcctggcaccgtcagcctagcagcattcttgggataa 399 ||||||||||| || || ||||| ||||| ||||| | ||| |||||||||||||| | Sbjct: 1599 gtgctgcatgccacacttggaccccctggaaccgttaaccttgcagcattcttggggaag 1540 Query: 400 aacttctcaaatactgtcctataatagtaggcttcttttgttgtgggtgtgttttcaggg 459 ||||| ||||| | | | | ||| ||||| |||||||| |||| || ||||||||||| Sbjct: 1539 aacttttcaaagattttgcgatagtagtacgcttctttagttgcaggggtgttttcagga 1480 Query: 460 taaacaaag 468 ||||||||| Sbjct: 1479 taaacaaag 1471
>gb|AF530460.1| Striga hermonthica asparagine synthetase (AS) mRNA, complete cds Length = 2278 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 517 ttcaatccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||| ||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 1640 ttcaagccatcaatccaactgtatccaactccatcgctaaactgttct 1593 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Minus Query: 286 ccagacgggtcgaggagcttggaccaggcggcgtcccattcaacagctttcgcggtgctg 345 |||||||||||||| ||||||||| | ||||||||||| ||||| || ||||| ||| Sbjct: 1871 ccagacgggtcgagattcttggaccacgacgcgtcccattctacagcctttgcggtactg 1812 Query: 346 catgcaacgctgggacctcctgg 368 || || || || ||||| ||||| Sbjct: 1811 cacgctacactaggaccccctgg 1789
>ref|NM_121062.2| Arabidopsis thaliana ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) AT5G10240 (ASN3) transcript variant AT5G10240.1 mRNA, complete cds Length = 2018 Score = 60.0 bits (30), Expect = 8e-06 Identities = 201/258 (77%) Strand = Plus / Minus Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 ||||| || ||||||||||| |||||||| || ||||| ||||| || || ||||||||| Sbjct: 1653 gaccaagctgcgtcccattccacagcttttgctgtgctacatgccacacttggacctcct 1594 Query: 367 ggcaccgtcagcctagcagcattcttgggataaaacttctcaaatactgtcctataatag 426 || || || ||||||||| |||| || | ||||| ||||| | || || || ||| Sbjct: 1593 ggtacagttgctctagcagcactcttagggaagaacttttcaaagatggttctgtagtag 1534 Query: 427 taggcttcttttgttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatg 486 || ||||||||||| |||||||| |||||| | |||||||| ||||| ||| ||| Sbjct: 1533 taagcttcttttgtcaaaggtgtgttatcagggaagacaaagcttgcgttcatcagcatt 1474 Query: 487 gaatctgacacatgtgcattagcatggtccttcaatccatcaatccaactgtacccaaca 546 | || || |||||| || ||||| || || | ||||||||||| ||||| ||||| Sbjct: 1473 gtctcagagacatgtttgtttgcatgatcttttagaccatcaatccagctgtatccaact 1414 Query: 547 ccatcgctgaactgttct 564 ||||| |||||||||||| Sbjct: 1413 ccatcactgaactgttct 1396
>ref|NM_001036787.1| Arabidopsis thaliana ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) AT5G10240 (ASN3) transcript variant AT5G10240.2 mRNA, complete cds Length = 2028 Score = 60.0 bits (30), Expect = 8e-06 Identities = 201/258 (77%) Strand = Plus / Minus Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 ||||| || ||||||||||| |||||||| || ||||| ||||| || || ||||||||| Sbjct: 1652 gaccaagctgcgtcccattccacagcttttgctgtgctacatgccacacttggacctcct 1593 Query: 367 ggcaccgtcagcctagcagcattcttgggataaaacttctcaaatactgtcctataatag 426 || || || ||||||||| |||| || | ||||| ||||| | || || || ||| Sbjct: 1592 ggtacagttgctctagcagcactcttagggaagaacttttcaaagatggttctgtagtag 1533 Query: 427 taggcttcttttgttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatg 486 || ||||||||||| |||||||| |||||| | |||||||| ||||| ||| ||| Sbjct: 1532 taagcttcttttgtcaaaggtgtgttatcagggaagacaaagcttgcgttcatcagcatt 1473 Query: 487 gaatctgacacatgtgcattagcatggtccttcaatccatcaatccaactgtacccaaca 546 | || || |||||| || ||||| || || | ||||||||||| ||||| ||||| Sbjct: 1472 gtctcagagacatgtttgtttgcatgatcttttagaccatcaatccagctgtatccaact 1413 Query: 547 ccatcgctgaactgttct 564 ||||| |||||||||||| Sbjct: 1412 ccatcactgaactgttct 1395
>ref|NM_114602.2| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.1 mRNA, complete cds Length = 2206 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 1590 ccatcgatccaactgtagccaacaccatcactgaactgttct 1549
>ref|NM_180332.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.2 mRNA, complete cds Length = 2299 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 1590 ccatcgatccaactgtagccaacaccatcactgaactgttct 1549
>ref|NM_180333.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.3 mRNA, complete cds Length = 2380 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 1673 ccatcgatccaactgtagccaacaccatcactgaactgttct 1632
>gb|AY096592.1| Arabidopsis thaliana putative glutamine-dependent asparagine synthetase (At3g47340) mRNA, complete cds Length = 1786 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 1391 ccatcgatccaactgtagccaacaccatcactgaactgttct 1350
>gb|AY072214.1| Arabidopsis thaliana putative glutamine-dependent asparagine synthetase (At3g47340) mRNA, complete cds Length = 2183 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 1592 ccatcgatccaactgtagccaacaccatcactgaactgttct 1551
>emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BAC clone T21L8 Length = 87224 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 38105 ccatcgatccaactgtagccaacaccatcactgaactgttct 38146
>gb|AF419557.1|AF419557 Arabidopsis thaliana AT3g47340/T21L8_90 mRNA, complete cds Length = 2123 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 1587 ccatcgatccaactgtagccaacaccatcactgaactgttct 1546
>gb|AF095453.1|AF095453 Arabidopsis thaliana asparagine synthetase (ASN2) mRNA, complete cds Length = 1960 Score = 60.0 bits (30), Expect = 8e-06 Identities = 192/246 (78%) Strand = Plus / Minus Query: 319 tcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcctggcaccgtcagc 378 |||||||| |||||||||||||| ||||| || | || ||||||||||| || ||| Sbjct: 1595 tcccattctacagctttcgcggtactgcaagctatacttggacctcctggtacagtcgct 1536 Query: 379 ctagcagcattcttgggataaaacttctcaaatactgtcctataatagtaggcttctttt 438 ||||||||| |||| || | |||||||| || | || || || ||||| ||||||||| Sbjct: 1535 ctagcagcactcttcgggaagaacttctcgaagatggttctgtagtagtacgcttctttt 1476 Query: 439 gttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatggaatctgacaca 498 || |||||||| || ||| | | |||||| ||||||| || ||| | ||| || ||| Sbjct: 1475 gtcagaggtgtgttatccgggaagaaaaagcttgcgtttgacagcatagtatcagagaca 1416 Query: 499 tgtgcattagcatggtccttcaatccatcaatccaactgtacccaacaccatcgctgaac 558 ||| ||| ||||| || |||| ||||| ||||| || |||||||| ||||| || ||| Sbjct: 1415 tgtttatttgcatgatctttcagaccatctatccagctatacccaactccatcactaaac 1356 Query: 559 tgttct 564 |||||| Sbjct: 1355 tgttct 1350
>gb|AF095452.1|AF095452 Arabidopsis thaliana asparagine synthetase (ASN3) mRNA, complete cds Length = 1986 Score = 60.0 bits (30), Expect = 8e-06 Identities = 201/258 (77%) Strand = Plus / Minus Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 ||||| || ||||||||||| |||||||| || ||||| ||||| || || ||||||||| Sbjct: 1607 gaccaagctgcgtcccattccacagcttttgctgtgctacatgccacacttggacctcct 1548 Query: 367 ggcaccgtcagcctagcagcattcttgggataaaacttctcaaatactgtcctataatag 426 || || || ||||||||| |||| || | ||||| ||||| | || || || ||| Sbjct: 1547 ggtacagttgctctagcagcactcttagggaagaacttttcaaagatggttctgtagtag 1488 Query: 427 taggcttcttttgttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatg 486 || ||||||||||| |||||||| |||||| | |||||||| ||||| ||| ||| Sbjct: 1487 taagcttcttttgtcaaaggtgtgttatcagggaagacaaagcttgcgttcatcagcatt 1428 Query: 487 gaatctgacacatgtgcattagcatggtccttcaatccatcaatccaactgtacccaaca 546 | || || |||||| || ||||| || || | ||||||||||| ||||| ||||| Sbjct: 1427 gtgtcagagacatgtttgtttgcatgatcttttagaccatcaatccagctgtatccaact 1368 Query: 547 ccatcgctgaactgttct 564 ||||| |||||||||||| Sbjct: 1367 ccatcactgaactgttct 1350
>emb|BX824817.1|CNS0A4VX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2052 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 1569 ccatcgatccaactgtagccaacaccatcactgaactgttct 1528
>gb|BT005014.1| Arabidopsis thaliana clone U20709 putative asparagine synthetase ASN3 (At5g10240) mRNA, complete cds Length = 1768 Score = 60.0 bits (30), Expect = 8e-06 Identities = 201/258 (77%) Strand = Plus / Minus Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 ||||| || ||||||||||| |||||||| || ||||| ||||| || || ||||||||| Sbjct: 1607 gaccaagctgcgtcccattccacagcttttgctgtgctacatgccacacttggacctcct 1548 Query: 367 ggcaccgtcagcctagcagcattcttgggataaaacttctcaaatactgtcctataatag 426 || || || ||||||||| |||| || | ||||| ||||| | || || || ||| Sbjct: 1547 ggtacagttgctctagcagcactcttagggaagaacttttcaaagatggttctgtagtag 1488 Query: 427 taggcttcttttgttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatg 486 || ||||||||||| |||||||| |||||| | |||||||| ||||| ||| ||| Sbjct: 1487 taagcttcttttgtcaaaggtgtgttatcagggaagacaaagcttgcgttcatcagcatt 1428 Query: 487 gaatctgacacatgtgcattagcatggtccttcaatccatcaatccaactgtacccaaca 546 | || || |||||| || ||||| || || | ||||||||||| ||||| ||||| Sbjct: 1427 gtctcagagacatgtttgtttgcatgatcttttagaccatcaatccagctgtatccaact 1368 Query: 547 ccatcgctgaactgttct 564 ||||| |||||||||||| Sbjct: 1367 ccatcactgaactgttct 1350
>gb|BT003929.1| Arabidopsis thaliana clone RAFL15-17-K18 (R20709) putative asparagine synthetase ASN3 (At5g10240) mRNA, complete cds Length = 2026 Score = 60.0 bits (30), Expect = 8e-06 Identities = 201/258 (77%) Strand = Plus / Minus Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 ||||| || ||||||||||| |||||||| || ||||| ||||| || || ||||||||| Sbjct: 1653 gaccaagctgcgtcccattccacagcttttgctgtgctacatgccacacttggacctcct 1594 Query: 367 ggcaccgtcagcctagcagcattcttgggataaaacttctcaaatactgtcctataatag 426 || || || ||||||||| |||| || | ||||| ||||| | || || || ||| Sbjct: 1593 ggtacagttgctctagcagcactcttagggaagaacttttcaaagatggttctgtagtag 1534 Query: 427 taggcttcttttgttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatg 486 || ||||||||||| |||||||| |||||| | |||||||| ||||| ||| ||| Sbjct: 1533 taagcttcttttgtcaaaggtgtgttatcagggaagacaaagcttgcgttcatcagcatt 1474 Query: 487 gaatctgacacatgtgcattagcatggtccttcaatccatcaatccaactgtacccaaca 546 | || || |||||| || ||||| || || | ||||||||||| ||||| ||||| Sbjct: 1473 gtctcagagacatgtttgtttgcatgatcttttagaccatcaatccagctgtatccaact 1414 Query: 547 ccatcgctgaactgttct 564 ||||| |||||||||||| Sbjct: 1413 ccatcactgaactgttct 1396
>gb|L29083.1|ATHMTGDAS Arabidopsis thaliana (clone At-ASN1) glutamine-dependent asparagine synthetase mRNA, complete cds Length = 1755 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 1391 ccatcgatccaactgtagccaacaccatcactgaactgttct 1350
>gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full insert mRNA sequence Length = 2064 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 334 ttcgcggtgctgcatgcaacgctgggacctcctggcaccgtcag 377 ||||| ||||||||||||||||| || || |||||||||||||| Sbjct: 1635 ttcgccgtgctgcatgcaacgcttggcccacctggcaccgtcag 1592 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactg 560 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 1446 ccatcaatccagctgtagccaacaccatcactgaactg 1409
>gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine synthetase (ASN1) mRNA, complete cds Length = 1815 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 334 ttcgcggtgctgcatgcaacgctgggacctcctggcaccgtcag 377 ||||| ||||||||||||||||| || || |||||||||||||| Sbjct: 1601 ttcgccgtgctgcatgcaacgcttggcccacctggcaccgtcag 1558 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactg 560 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 1412 ccatcaatccagctgtagccaacaccatcactgaactg 1375
>gb|AY240926.1| Lycopersicon esculentum asparagine synthetase (AS1) mRNA, partial cds Length = 730 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 527 caatccaactgtacccaacaccatcgctgaactgttct 564 ||||||||||||| ||||| ||||||||||| |||||| Sbjct: 730 caatccaactgtatccaacgccatcgctgaattgttct 693
>gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine synthetase 1 mRNA, complete cds Length = 1973 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactg 560 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 1462 ccatcaatccagctgtagccaacaccatcactgaactg 1425 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 334 ttcgcggtgctgcatgcaacgctgggacctcctggcaccgtcag 377 ||||| ||||||||||| ||||| || || |||||||| ||||| Sbjct: 1651 ttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcag 1608
>emb|X99552.1|AOASPS A.officinalis gene encoding asparagine synthetase Length = 3812 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactg 560 |||||||||||||| || ||||||||||| |||||||| Sbjct: 3141 ccatcaatccaactatatccaacaccatcactgaactg 3104 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 316 gcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcc 365 ||||||||||| | ||| ||||| |||||||| |||| ||| |||||||| Sbjct: 3637 gcgtcccattcgatagccttcgccgtgctgcaagcaatgcttggacctcc 3588
>emb|X67958.1|AOASPSYNM A.officinalis mRNA for asparagine synthetase Length = 1978 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactg 560 |||||||||||||| || ||||||||||| |||||||| Sbjct: 1446 ccatcaatccaactatatccaacaccatcactgaactg 1409 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 316 gcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcc 365 ||||||||||| | ||| ||||| |||||||| |||| ||| |||||||| Sbjct: 1653 gcgtcccattcgatagccttcgccgtgctgcaagcaatgcttggacctcc 1604
>emb|AL360334.1|ATF18D22 Arabidopsis thaliana DNA chromosome 5, BAC clone F18D22 (ESSA project) Length = 57180 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 18262 ccatcaatccagctgtatccaactccatcactgaactgttct 18303 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 ||||| || ||||||||||| |||||||| || ||||| ||||| || || ||||||||| Sbjct: 17859 gaccaagctgcgtcccattccacagcttttgctgtgctacatgccacacttggacctcct 17918 Query: 367 gg 368 || Sbjct: 17919 gg 17920
>emb|BX830209.1|CNS09YW6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1954 Score = 52.0 bits (26), Expect = 0.002 Identities = 200/258 (77%) Strand = Plus / Minus Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 ||||| || ||||||||||| |||||||| || ||||| |||| || || ||||||||| Sbjct: 1613 gaccaagctgcgtcccattccacagcttttgctgtgctacatgtcacacttggacctcct 1554 Query: 367 ggcaccgtcagcctagcagcattcttgggataaaacttctcaaatactgtcctataatag 426 || || || ||||||||| |||| || | ||||| ||||| | || || || ||| Sbjct: 1553 ggtacagttgctctagcagcactcttagggaagaacttttcaaagatggttctgtagtag 1494 Query: 427 taggcttcttttgttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatg 486 || ||||||||||| |||||||| |||||| | |||||||| ||||| ||| ||| Sbjct: 1493 taagcttcttttgtcaaaggtgtgttatcagggaagacaaagcttgcgttcatcagcatt 1434 Query: 487 gaatctgacacatgtgcattagcatggtccttcaatccatcaatccaactgtacccaaca 546 | || || |||||| || ||||| || || | ||||||||||| ||||| ||||| Sbjct: 1433 gtctcagagacatgtttgtttgcatgatcttttagaccatcaatccagctgtatccaact 1374 Query: 547 ccatcgctgaactgttct 564 ||||| |||||||||||| Sbjct: 1373 ccatcactgaactgttct 1356
>emb|AL356332.1|ATT31P16 Arabidopsis thaliana DNA chromosome 5, BAC clone T31P16 (ESSA project) Length = 80088 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 78164 ccatcaatccagctgtatccaactccatcactgaactgttct 78205 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcct 366 ||||| || ||||||||||| |||||||| || ||||| ||||| || || ||||||||| Sbjct: 77761 gaccaagctgcgtcccattccacagcttttgctgtgctacatgccacacttggacctcct 77820 Query: 367 gg 368 || Sbjct: 77821 gg 77822
>dbj|AB035247.1| Astragalus sinicus AsAS1 mRNA for asparagine synthetase, complete cds Length = 1931 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||||||||| || || ||||||||||| |||||||||||| Sbjct: 1399 ccatcaatccagctatagccaacaccatcactgaactgttct 1358 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 303 cttggaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaac 353 ||||||||| || || ||||||||||| ||||| || ||||| |||||||| Sbjct: 1619 cttggaccaagcagcatcccattcaactgctttagctgtgctacatgcaac 1569
>gb|BT009049.1| Triticum aestivum clone wdk9n1.pk001.f6:fis, full insert mRNA sequence Length = 2119 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 508 gcatggtccttcaatccatcaatccaactgtacccaacaccatcgctgaactg 560 ||||| ||||||| ||||||||||| || |||||||||||||| || ||||| Sbjct: 1475 gcatgatccttcaggccatcaatccagctatacccaacaccatcactaaactg 1423
>emb|AJ496567.2|PSY496567 Pinus sylvestris mRNA for putative asparagine synthetase (asn1 gene) Length = 2110 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 517 ttcaatccatcaatccaactgtacccaacaccatcgctgaa 557 ||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 1489 ttcaagccatcaatccagctgtagccaaccccatcgctgaa 1449
>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE Length = 125647 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttc 563 |||||||||||||| || ||||||||||| ||||| ||||| Sbjct: 6876 ccatcaatccaactataaccaacaccatcactgaattgttc 6836
>gb|U89923.1|MSU89923 Medicago sativa asparagine synthetase mRNA, complete cds Length = 2184 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 507 agcatggtccttcaatccatcaatccaactgtacccaacaccatcgctgaactgttc 563 |||||||||||| | ||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 1593 agcatggtccttaatgccatcaatccaaccatagccaactccatcactgaactgttc 1537
>ref|NM_125900.2| Arabidopsis thaliana ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) AT5G65010 (ASN2) transcript variant AT5G65010.2 mRNA, complete cds Length = 2071 Score = 46.1 bits (23), Expect = 0.12 Identities = 193/249 (77%), Gaps = 3/249 (1%) Strand = Plus / Minus Query: 319 tcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcctggcaccgtcagc 378 |||||||| |||||||||||||| ||||| || | || ||||||||||| || ||| Sbjct: 1632 tcccattctacagctttcgcggtactgcaagctatacttggacctcctggtacagtcgct 1573 Query: 379 ctagcagca---ttcttgggataaaacttctcaaatactgtcctataatagtaggcttct 435 ||||||||| | ||| || | |||||||| || | || || || ||||| |||||| Sbjct: 1572 ctagcagcactctgcttcgggaagaacttctcgaagatggttctgtagtagtacgcttct 1513 Query: 436 tttgttgtgggtgtgttttcagggtaaacaaagctggcgtttgtcatcatggaatctgac 495 ||||| |||||||| || ||| | |||||||| ||||||| || ||| | ||| || Sbjct: 1512 tttgtcagaggtgtgttatccgggaagacaaagcttgcgtttgacagcatagtatcagag 1453 Query: 496 acatgtgcattagcatggtccttcaatccatcaatccaactgtacccaacaccatcgctg 555 |||||| ||| ||||| || |||| ||||| ||||| || |||||||| ||||| || Sbjct: 1452 acatgtttatttgcatgatctttcagaccatctatccagctatacccaactccatcacta 1393 Query: 556 aactgttct 564 ||||||||| Sbjct: 1392 aactgttct 1384
>emb|X52179.1|PSAS1 Pea AS1 nodule mRNA for asparagine synthase (EC 6.3.5.4) Length = 2200 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 319 tcccattcaacagctttcgcggtgctgcatgcaac 353 |||||||||| ||||||| | |||||||||||||| Sbjct: 1691 tcccattcaatagctttctctgtgctgcatgcaac 1657
>emb|AJ133522.1|PVU133522 Phaseolus vulgaris mRNA for asparagine synthetase type-I Length = 2086 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 307 gaccaggcggcgtcccattcaacagctttcgcggtgctgcatgcaac 353 |||||||| || ||||| ||||||||||| || ||||| |||||||| Sbjct: 1754 gaccaggcagcatcccactcaacagcttttgctgtgctacatgcaac 1708
>emb|AJ009952.1|PVU9952 Phaseolus vulgaris mRNA for asparagine synthetase type II Length = 2044 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 319 tcccattcaacagctttcgcggtgctgcatgcaac 353 ||||||||||||||||| || |||||||| ||||| Sbjct: 1614 tcccattcaacagctttggctgtgctgcaagcaac 1580 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 |||||||||||||| || ||||| ||||| ||||| |||||| Sbjct: 1410 ccatcaatccaactatagccaactccatcactgaattgttct 1369
>gb|AF005724.1| Sandersonia aurantiaca asparagine synthetase (SAND1) mRNA, complete cds Length = 2121 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 522 tccatcaatccaactgtacccaacaccatcgctgaactgttct 564 |||||||||||| ||||| ||||| ||||| || ||||||||| Sbjct: 1434 tccatcaatccagctgtagccaactccatcactaaactgttct 1392 Score = 40.1 bits (20), Expect = 7.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 318 gtcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcc 365 ||||||||||| |||||| || |||||||| || || || |||||||| Sbjct: 1627 gtcccattcaatagcttttgctgtgctgcaagccacacttggacctcc 1580
>gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRNA, complete cds Length = 1867 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactg 560 ||||||||||| || |||||||||||||| || ||||| Sbjct: 1391 ccatcaatccagctatacccaacaccatcactaaactg 1354
>emb|Z72354.1|VFAS1 V.faba mRNA for asparagine synthetase Length = 2154 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Minus Query: 319 tcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcctggcaccgtcagc 378 |||||||||| |||||| | |||||||||||||| || || ||||| || || |||||| Sbjct: 1715 tcccattcaatagctttttctgtgctgcatgcaacactaggtcctccaggaactgtcagc 1656 Query: 379 ct 380 || Sbjct: 1655 ct 1654
>emb|X89410.1|LJAS2GENE L.japonicus mRNA for asparagine synthetase (clone LJAS2) Length = 2187 Score = 44.1 bits (22), Expect = 0.49 Identities = 49/58 (84%) Strand = Plus / Minus Query: 507 agcatggtccttcaatccatcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||||||| |||| ||||||||||||| || ||||| ||||| ||||| |||||| Sbjct: 1551 agcatggtctttcagcccatcaatccaaccatagccaactccatcactgaattgttct 1494
>emb|X89409.1|LJAS1GENE L.japonicus mRNA for asparagine synthetase (clone LJAS1) Length = 2053 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 |||||||||||||| || ||||| ||||| ||||| |||||| Sbjct: 1489 ccatcaatccaactatagccaactccatcactgaattgttct 1448
>gb|AY081945.1| Securigera parviflora asparagine synthetase (As1) mRNA, complete cds Length = 2109 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactgttct 564 |||||||||||||| || ||||| ||||| ||||| |||||| Sbjct: 1538 ccatcaatccaactatagccaactccatcactgaattgttct 1497
>dbj|AB019236.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK3 Length = 81494 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 319 tcccattcaacagctttcgcggtgctgcatgcaacgctgggacctcctgg 368 |||||||| |||||||||||||| ||||| || | || ||||||||||| Sbjct: 69471 tcccattctacagctttcgcggtactgcaagctatacttggacctcctgg 69422
>gb|L40327.1|ALFASPSYN Medicago sativa asparagine synthetase gene, exons 1-13 and complete cds Length = 7969 Score = 44.1 bits (22), Expect = 0.49 Identities = 46/54 (85%) Strand = Plus / Minus Query: 507 agcatggtccttcaatccatcaatccaactgtacccaacaccatcgctgaactg 560 |||||||||||| | ||||||||||||| || ||||| ||||| |||||||| Sbjct: 6632 agcatggtccttaataccatcaatccaaccatagccaactccatcactgaactg 6579
>dbj|AB050900.1| Raphanus sativus Asn1 mRNA for asparagine synthetase, complete cds Length = 2088 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 523 ccatcaatccaactgtacccaacaccatcgctgaactg 560 ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 1446 ccatcgatccagctgtacccaacaccatcactaaactg 1409
>gb|AC102592.6| Mus musculus chromosome 18, clone RP23-341L13, complete sequence Length = 190723 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 tgacacatgtgcattagcatg 512 ||||||||||||||||||||| Sbjct: 11193 tgacacatgtgcattagcatg 11173
>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence Length = 205291 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 gcattctatatgaaaccatgg 128 ||||||||||||||||||||| Sbjct: 183404 gcattctatatgaaaccatgg 183384
>gb|AC147044.2| Mus musculus BAC clone RP23-106B19 from chromosome 14, complete sequence Length = 181146 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 caatttctacactgaatgatt 48 ||||||||||||||||||||| Sbjct: 113525 caatttctacactgaatgatt 113545
>gb|AC073109.2| Homo sapiens BAC clone RP11-502P9 from 7, complete sequence Length = 158340 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 ttcaatccatcaatccaactg 537 ||||||||||||||||||||| Sbjct: 46371 ttcaatccatcaatccaactg 46351
>ref|XM_672084.1| Plasmodium berghei strain ANKA asparagine synthetase (PB000521.01.0) partial mRNA Length = 1644 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 520 aatccatcaatccaactgtacccaacaccatcg 552 ||||||||||||||| | || |||||||||||| Sbjct: 1349 aatccatcaatccaattataaccaacaccatcg 1317
>emb|BX322601.9| Zebrafish DNA sequence from clone DKEY-170H8 in linkage group 7, complete sequence Length = 210153 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 gtccttcaatccatcaatcca 533 ||||||||||||||||||||| Sbjct: 78146 gtccttcaatccatcaatcca 78166
>emb|BX088704.7| Zebrafish DNA sequence from clone CH211-208M6 in linkage group 7, complete sequence Length = 209042 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 gtccttcaatccatcaatcca 533 ||||||||||||||||||||| Sbjct: 93082 gtccttcaatccatcaatcca 93102
>gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone mgs1-30a13, complete sequence Length = 196824 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 gcattctatatgaaaccatgg 128 ||||||||||||||||||||| Sbjct: 153669 gcattctatatgaaaccatgg 153649
>emb|BX323029.6| Zebrafish DNA sequence from clone CH211-261O16, complete sequence Length = 175261 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 gtccttcaatccatcaatcca 533 ||||||||||||||||||||| Sbjct: 18715 gtccttcaatccatcaatcca 18695
>gb|AC171536.3| Mus musculus chromosome 18, clone RP23-189P10, complete sequence Length = 209499 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 tgacacatgtgcattagcatg 512 ||||||||||||||||||||| Sbjct: 131460 tgacacatgtgcattagcatg 131440
>gb|U77678.1|GMU77678 Glycine max asparagine synthetase 2 (AS2) mRNA, complete cds Length = 2143 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 524 catcaatccaactgtacccaacaccatcgctgaactgttct 564 ||||||||||||| || ||||| ||||| ||||| |||||| Sbjct: 1544 catcaatccaactatagccaactccatcactgaattgttct 1504
>gb|AC105995.9| Mus musculus chromosome 5, clone RP24-168A7, complete sequence Length = 150133 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 aatagaggaaagcaatttct 35 |||||||||||||||||||| Sbjct: 141989 aatagaggaaagcaatttct 142008
>gb|AC157938.9| Mus musculus chromosome 5, clone RP23-307P18, complete sequence Length = 188926 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 aatagaggaaagcaatttct 35 |||||||||||||||||||| Sbjct: 39570 aatagaggaaagcaatttct 39589
>gb|AC113262.29| Mus musculus strain 129/Sv clone ct7-518k21 map 5, complete sequence Length = 180394 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aatagaggaaagcaatttct 35 |||||||||||||||||||| Sbjct: 6600 aatagaggaaagcaatttct 6581
>emb|CT025238.2| Xenopus tropicalis finished cDNA, clone TEgg075e12 Length = 2802 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tatgaaaccatggggtggaa 135 |||||||||||||||||||| Sbjct: 955 tatgaaaccatggggtggaa 974
>gb|AC145427.2| Rattus norvegicus chromosome 1 clone RP32-7K9 map q36, complete sequence Length = 154633 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gttttcagggtaaacaaagc 469 |||||||||||||||||||| Sbjct: 75349 gttttcagggtaaacaaagc 75368
>gb|AC122299.5| Mus musculus BAC clone RP23-270L23 from chromosome 5, complete sequence Length = 209091 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 ttgtgggtgtgttttcaggg 459 |||||||||||||||||||| Sbjct: 157686 ttgtgggtgtgttttcaggg 157705
>gb|AC127356.4| Mus musculus BAC clone RP23-100B5 from chromosome 8, complete sequence Length = 199258 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 taaacagcagctgttggaac 158 |||||||||||||||||||| Sbjct: 102698 taaacagcagctgttggaac 102717
>ref|XM_739224.1| Plasmodium chabaudi chabaudi asparagine synthetase (PC000916.01.0) partial mRNA Length = 1737 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 520 aatccatcaatccaactgtacccaacaccatc 551 ||||||||||||||| | || ||||||||||| Sbjct: 1442 aatccatcaatccaattataaccaacaccatc 1411
>emb|CR627499.11| Zebrafish DNA sequence from clone CH211-1C22 in linkage group 20, complete sequence Length = 42644 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aggaaaatagaggaaagcaa 30 |||||||||||||||||||| Sbjct: 34252 aggaaaatagaggaaagcaa 34233
>emb|AL136230.9| Human DNA sequence from clone RP1-95I21 on chromosome 6, complete sequence Length = 120515 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 485 tggaatctgacacatgtgcattag 508 |||| ||||||||||||||||||| Sbjct: 6231 tggactctgacacatgtgcattag 6208
>emb|Z98547.2|PFMAL3P3 Plasmodium falciparum MAL3P3, complete sequence Length = 116696 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 520 aatccatcaatccaactgtacccaacaccatc 551 ||||||||||||||| | || ||||||||||| Sbjct: 74675 aatccatcaatccaattatatccaacaccatc 74644
>gb|AF190728.1| Helianthus annuus asparagine synthetase (HAS1) mRNA, complete cds Length = 1971 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 taatagtaggcttcttttgt 440 |||||||||||||||||||| Sbjct: 1520 taatagtaggcttcttttgt 1501
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 529 atccaactgtacccaacaccatcgctgaactg 560 ||||||| ||| ||||||||||| |||||||| Sbjct: 114654 atccaaccgtagccaacaccatcactgaactg 114623
>dbj|AK049939.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630013E09 product:RIKEN cDNA 2810402A17 gene, full insert sequence Length = 3847 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 caatttctacactgaatgat 47 |||||||||||||||||||| Sbjct: 185 caatttctacactgaatgat 166
>emb|BX255947.6| Zebrafish DNA sequence from clone CH211-260D9 in linkage group 19, complete sequence Length = 147891 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aggaaaatagaggaaagcaa 30 |||||||||||||||||||| Sbjct: 7751 aggaaaatagaggaaagcaa 7732
>gb|AC154678.2| Mus musculus BAC clone RP24-302G10 from chromosome 16, complete sequence Length = 198982 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tctcaaatactgtcctataa 423 |||||||||||||||||||| Sbjct: 68311 tctcaaatactgtcctataa 68330
>gb|AC133505.3| Mus musculus BAC clone RP24-176M20 from chromosome 16, complete sequence Length = 149947 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 tttgttgtgggtgtgttttcaggg 459 |||| ||||||||||||||||||| Sbjct: 108216 tttgctgtgggtgtgttttcaggg 108193
>emb|BX936454.25| Zebrafish DNA sequence from clone DKEY-29M11 in linkage group 20, complete sequence Length = 225683 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 aggaaaatagaggaaagcaa 30 |||||||||||||||||||| Sbjct: 191906 aggaaaatagaggaaagcaa 191887
>emb|AL954679.7| Zebrafish DNA sequence from clone DKEY-63J12 in linkage group 20, complete sequence Length = 132218 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aggaaaatagaggaaagcaa 30 |||||||||||||||||||| Sbjct: 8309 aggaaaatagaggaaagcaa 8328
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 40.1 bits (20), Expect = 7.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 508 gcatggtccttcaatccatcaatccaactgtacccaacaccatcgctgaactgttc 563 |||||| ||||||| ||||| |||||| ||| || || ||||||||||| ||||| Sbjct: 2890723 gcatgggccttcaaaccatcgatccaagagtaacccacgccatcgctgaattgttc 2890668
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 529 atccaactgtacccaacaccatcgctgaactg 560 ||||||| ||| ||||||||||| |||||||| Sbjct: 113096 atccaaccgtagccaacaccatcactgaactg 113065
>emb|AL954296.9| Mouse DNA sequence from clone RP23-272P2 on chromosome X, complete sequence Length = 88296 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 caatttctacactgaatgat 47 |||||||||||||||||||| Sbjct: 22212 caatttctacactgaatgat 22231 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,918,834 Number of Sequences: 3902068 Number of extensions: 4918834 Number of successful extensions: 83906 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83682 Number of HSP's gapped (non-prelim): 218 length of query: 564 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 541 effective length of database: 17,143,297,704 effective search space: 9274524057864 effective search space used: 9274524057864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)