| Clone Name | rbags19g04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | KPB1_RAT (Q64649) Phosphorylase b kinase alpha regulatory chain,... | 33 | 0.44 | 2 | PDXJ_CHLTE (Q8KFJ5) Pyridoxal phosphate biosynthetic protein pdx... | 31 | 2.2 |
|---|
>KPB1_RAT (Q64649) Phosphorylase b kinase alpha regulatory chain, skeletal| muscle isoform (Phosphorylase kinase alpha M subunit) Length = 1242 Score = 33.5 bits (75), Expect = 0.44 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 8/95 (8%) Frame = -2 Query: 477 PELRSRGGRRN*LVL----FVSPRGACPLSFR*RNSICTP--TKQDAGSSFQQRRRLDG- 319 PE ++ GG + + L F+SP S ++C P +K +Q+RRRLDG Sbjct: 1023 PESQTSGGHPSSIDLMSPTFLSPAACISASSGSFPTVCEPQTSKDSRQGQWQRRRRLDGA 1082 Query: 318 -SRDGCCLKDDAWCPAEDMSGLPILGYVMSCTSSR 217 +R W + GL + G+V+ +S+R Sbjct: 1083 LNRVPIGFYQKVWKILQKCHGLSVEGFVLPSSSTR 1117
>PDXJ_CHLTE (Q8KFJ5) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 237 Score = 31.2 bits (69), Expect = 2.2 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 515 TLFIC*KEEAVEIQNSGQEEVEETSWFCLFHLGVLALCPSDEETAFARPR 366 ++FI +EEA+E+ + E FH G +LC SD++TA+ R Sbjct: 128 SVFIEPEEEAIELAAEAGANIVE------FHTGTYSLCTSDKQTAYELER 171 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,019,746 Number of Sequences: 219361 Number of extensions: 1439287 Number of successful extensions: 3086 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3010 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3086 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)