>PITX1_DROME (O18400) Pituitary homeobox 1 homolog (D-PTX1)|
          Length = 509

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -3

Query: 484 QTEAIKSPCHDEPLLTADSNCHPGSPTLSPKHERAAKRQRSSDAEFPEAELSLPQHIFES 305
           +TE I S  HDEP+ T+            PK+++  KRQR     F   +L   +H F  
Sbjct: 235 KTENISSSGHDEPMTTSGEE---------PKNDKKNKRQRRQRTHFTSQQLQELEHTFSR 285

Query: 304 SSGPE 290
           +  P+
Sbjct: 286 NRYPD 290

>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau|
           kinase)
          Length = 1321

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 418 PGSPTLSPKHERAAKRQRSSDAEFPEAELSLPQHIFESSSGPEFQQCSVPY 266
           PGSP+ SP H     R+R SD   P+ ++      FE +  P     S+PY
Sbjct: 635 PGSPSHSPLHSGPRPRRRESDPTGPQRQVFSVAPPFEVNGLPRAVPLSLPY 685

>RW1_MOUSE (O70472) RW1 protein|
          Length = 1829

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = -3

Query: 496  DSGSQTEAIKSPCHDEPLLTADSNCHPGSPTLSPKHERAAKRQRSSDAEFPEAELSLPQH 317
            DS S T    +P   EPLL  D+  H G P +  K E    + +    +   A+  +P  
Sbjct: 1370 DSSSTTTETSNP-DTEPLLREDTEKHKGRPAVPEKQESELSQGKPKSKKLLNAKKEIPTD 1428

Query: 316  IFESS 302
            +  SS
Sbjct: 1429 VKGSS 1433

>DCDA_BUCBP (Q89AC6) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP|
           decarboxylase)
          Length = 418

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 236 HFGSILEWCHLKGICCCMLT*IVRC 162
           H GS +++CHLK +C  M+  +++C
Sbjct: 187 HIGSGVDYCHLKRVCKAMIDQVLQC 211

>DCR1C_RAT (Q5XIX3) Artemis protein (EC 3.1.-.-) (DNA cross-link repair 1C|
           protein) (SNM1-like protein)
          Length = 698

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -3

Query: 493 SGSQTEAIKSPCHDEPLLTADSNCHPGSPTLSPKHERAAKRQRSSDAEFP---EAELSLP 323
           SG++   +  PC +EP   +     P   +L+      A  Q SSD E P   EAEL  P
Sbjct: 615 SGAEVNGV--PCIEEPDTVSGRKSSPEKTSLTSTQ---ADSQSSSDFEIPSTPEAELPKP 669

Query: 322 QHI 314
           +H+
Sbjct: 670 EHL 672

>SYTL1_HUMAN (Q8IYJ3) Synaptotagmin-like protein 1 (Exophilin-7) (JFC1 protein)|
           (SB146)
          Length = 562

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = -3

Query: 400 SPKHERAAKRQRSSDAEFPEAELSL---PQHIFESSSGPEFQQCSVP 269
           +P H+R A+       E PE  L++   PQ     + GP+F   SVP
Sbjct: 117 APGHDREAEAAVKEKEEGPEPRLTIDEAPQERLRETEGPDFPSPSVP 163

>UBP53_MOUSE (P15975) Inactive ubiquitin carboxyl-terminal hydrolase 53|
            (Ubiquitin-specific peptidase 53) (Per-hexamer repeat
            protein 3)
          Length = 1069

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
 Frame = -3

Query: 505  FKRDSGSQTEAIKSPCHDEPLLTADSNCHPGSPTLSPKHERAAKRQR------SSDAEFP 344
            +  +S S+   + S C+ +       +CH   P L PK    A   R      S D    
Sbjct: 887  YSDNSLSRELTLLSACNADSCQMPKLHCHRSPPPLPPKKYSTASAPRLERVGLSPDVGVT 946

Query: 343  EA----ELSLPQHIFESSSGPEFQ 284
            EA      SLP+H    +SGP  +
Sbjct: 947  EAFNTNPSSLPKHSLSPASGPSLE 970

>POBB_PSEPS (Q52186) Phenoxybenzoate dioxygenase beta subunit (EC 1.-.-.-)|
           (4-carboxydiphenyl ether;phenoxybenzoate dioxygenase
           beta subunit)
          Length = 319

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +2

Query: 323 RKGQLGLRELGVAASLPLCCPLVLRTESRRTGMTVGICC*QRFIVTWTLD 472
           ++G  G+ E  V A +P    LVL  + R  G T+ ICC        TLD
Sbjct: 269 QQGVCGICETAVLAGVPDHRDLVLSDQERAAGRTMMICCSGSKTAELTLD 318

>VGLX_EHV1B (P28968) Glycoprotein X precursor|
          Length = 797

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
 Frame = -3

Query: 604 ATVTASSDQFPDSERTDXXXXXXXXXXXSQGAAFKRDSGSQTEA---IKSPCHD--EPLL 440
           +T T S+DQF  S  +            + G     +S S TEA   + S  ++  E L 
Sbjct: 385 STATPSTDQFTGSSASTESDSTDSSTVPTTGTESITESSSTTEASTNLGSSTYESTEALE 444

Query: 439 TADSNCHPG--SPTLSPKHERAAKRQRSSD 356
           T D N   G  +P+ SP+    A  Q++ D
Sbjct: 445 TPDGNTTSGNTTPSPSPRTPSFADTQQTPD 474

>CAAL_SILPO (Q5LRC0) Carboxylate-amine ligase SPO2209 (EC 6.3.-.-)|
          Length = 384

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -3

Query: 355 AEFPEAELSLPQHIFESSSGPEFQQCSV 272
           AE PEA +S  Q  FE    PEF QC +
Sbjct: 37  AEAPEALMSTCQADFEGQVSPEFLQCQI 64

>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
 Frame = -3

Query: 604 ATVTASSDQFPDSERTDXXXXXXXXXXXSQGAAFKRDSGSQTEA---IKSPCHD--EPLL 440
           +T T S+DQF  S  +            + G     +S S TEA   + S  ++  E L 
Sbjct: 454 STATPSTDQFTGSSASTESDSTDSSTVPTTGTESITESSSTTEASTNLGSSTYESTEALE 513

Query: 439 TADSNCHPG--SPTLSPKHERAAKRQRSSD 356
           T D N   G  +P+ SP+    A  Q++ D
Sbjct: 514 TPDGNTTSGNTTPSPSPRTPSFADTQQTPD 543


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,593,323
Number of Sequences: 219361
Number of extensions: 1664286
Number of successful extensions: 4131
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4130
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)